Lag0039529 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0039529
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRibonuclease H
Locationchr2: 45791791 .. 45795752 (-)
RNA-Seq ExpressionLag0039529
SyntenyLag0039529
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGCCGAGGTGCCTCAGAAGTTCAAAATTCCCACATTCAAGTCGTATGATGGCAAGAAGGACCTCGTGCAACACCTAGACACCTACAGAACGTGGATGGACTTTCATGACATTTTAGATGCAATCAGGTGTTGTGCCTTCTCTTTCACTTTAAGAGGGTTAGCAAAGCAATGGTTTCAGAGGTTGCAAAGAAGGTCCATTAGTTCTTTCGAAGAACTAGCCCGAGCGTTCATCTCACAGTTCATGGGAGCCAGAGAACAGCGCAAGCCTCACATTAATCTTTTAACTGTCAAGCAACAACCAGGTGAGAGTTTGCGTGACTACATATAACACGTTTTAATGAAGAAGCACTTGAGGTCAAAGGATACAGTGATGGAGCAGCCCTGGTAGCCATAATTGTCGGGCTGGAGGACGAGAGATTGCTTAATTCGATAGGTAAAAGTCAATCCCATACCTATACTGAGTTTGTCTCTAGAGCCCAAAAATATATGAGTGTAGAGGAATTGCTCAAATCAAAGAAGCCAGAACGTTAACATAAGAGGCATTCTTCATTCGACCAGGACATAAAGAAGGACAAAAGACAGTGAACAAACGACGGTGGGCAAGGCCGAGCTGACCATGATCATGGTCGAGCCGAGCTGACCATGACCATGGCCAAGGCCGAGCACATCCCTTTGGTAAGTTTGAGAAATGTACACCAATTGTTATTCCATAAGAGCAAGTTCTGATGGAGATTCAAAACACAGGTCTTCTTAAATTCCCGATGAAGATGAAGTCAAATCCTGATAGAAGAGACAAGAGTCAATACTATCTTTTCCACCGGGACCACGGGCATTCAACCAGAAACTGTATTCAATTGAAGGATGAAATTGAGGCACTGATCTAGAATGGATATCTGAAGGAGTTTGTCATTGAAACCGAGGCGAGGTCGAGGCTGACCAAAGATGGCCGAGACAAAGAAAAACCCCCACTGGAGATCAGAACCATCTTTGGAGAACCAACTGGAGGAGGTTCAAGTAGAAAAAGAAAAGCTATTGCTAGAGAAGCAAGGTTTGAATCAGAATACGAAGGTATGTACTTTGTCCATCTAGCAAAGGTACATCCCCTTTTGGAATTCGGTACATCTCGTTTTGGAATTCACTAGGGTTGAAGCAGCAAACATACATCAGCCATATTAAGATGCTCTGGTAGTCACTTTAATGGTGGCCAATGTGAAAATCCATCGTATTCCGATCGATGGAGGAAGTTCGGCTGATGTCCTTTCTCTAATGGCCTTCGAGGCAATAAAGTTAGGGAGAGAACTCTTGAAACCAAGCCTTACACCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGAGAACGAGTGACACCAGAGGGTAGCATAGAACTTCCTGTGACCTTTGGGGATGGAAGAATACAGTGATGAAGATAATAAACTTCTTAGTTGTGGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCATTTCAGCCTACAAGGCAATCTTAAGAAGGCTGACCTTGTATGATATGAAGGCCATAGCTTCAACTTATCATCAGTTGCTGAAGTTTCCAACTCAGAATGGTGTAGGGATTGTCAGAGGAGAGTAGAAGACATCGAGGGAGTGTTACTCGACAATACTGAAAGAAGTCAAGCGGCAGAAGGCCTAGGCCGACCAGGGTCGAACCGATCCGAGGCCGAGCAGGGCACACTTCCACCAACACTGAATCTGAACTTATGGAGTTTTATAGCTTCTTATGTATTGCATTTCATCACGTAATTAAACATTAGTTGTTCTTCTTTTACTTCTAGTATGAAGGAATAGGCTGTGTTTTTCCTATTTGTTTTCATTCAAATGTAAAAGTCCAATTAATGCCAAAGCTCCAGTTTTTACCATTAAAGTTCAATATTCAGAAGTGTGCACAAGACAACCAATCCAAGCATTACCTTCATGCTAGAACAAGTCAAAGCTAAGTGAGCCTGGGCCTCAGGGTCTACCCTGCCTCATCTTGTTTCGTGAACACGCAAGCCTGGACCACCAGGTCTACCTCGTCTCATCTAGCTCGAGTCCACATATTCATGCAAGCTTGAACCATCGGGTGTACCTTGCCTCATCTAGATTAGAGATTATTCGAGCTTGAACAACCGGGTCTACCTCGCCTCATATGGCTTGGGCTAATCACTTTATGCGAGCTTGGGCCCAGACCTATCTCGCCTAATCCAGATTTGAGATTATGTGAGCCTGGACCACCGGGTCTACCTCGCAGTATCTGGCTTTAGCCGATCACTTTTCGTGAGCCTGGGCCCCTGGGTCTACCTCGCCTCATCCAGCTTTGAGCATGCATATGCAAGCCTGGGCTATCGAGTCTACCTCGCCCATCTGGCTTGAACCCATGCACTTCATCCAAGCCGAGCCCACCTAGTTGAGGCCGAGGCCGAGCACAACTTGCCGAGGTCGACCCTAAACTTCAAAGGTATTCTTTATTTACTCAACTATATTTTATTTTTCAGTAAAAATGTTACTAGAGTAGAGGGCTACACAGGGATATGCACTCCCTATTAAACAAAAAATAGTAACAGGGGATATGTGCTCCCAATTAACAAAAACTAATGTATGAATGCAGGGGCTGACATTTGAGCTAATAGGGACTTGAGACTGAAGCCGACCCGAGCCTTTTCCCTCACTATTCTTCCATGAGATTTAATGTATCAATGTAGGACGCTGACACTTGAGCTAACAGGGGCTTGACGCATAGGCCGGCCCTAGCCTCTTCCCTTATTTTTCTTTTGCAGAAACTAATATTTTGGTGCAGGAATATAAAATGCTCGATAATACGAAAAGTGGCCAAGGCCGATCCGATGGGTTTACCACATGTGCCACATAAATTGGTAAGTGAGAAGCACACATAGAGGGCTTCAAAACAAAGGAATGGACTGAACAACGTTCAAATATGAAGGAATGAGAATGGGAGGTCCAGAAGAAAGGCACGAAGGTTTGGACTTGCCCCAAACCTCAGCCTCAACCCCATCCCAATGTCGAGGCTAGGGTCGAGGCTCGTCTAGTCGTTCCTACAATCTCTCACTTTTCTCATTTTTATCTTACCTAACCCCTATCCAGGGAGCCTCTCTGTTTTGTCTAGTTTTGTCTTCTTTTGCAGGATAACAAGGAATCCACACATGAGCCAACACAGGACGAGGGTCATACTCTTAAATTGGGCTTAAGAAGCTCGACTTATAGCGATAAGCCACACCTGAATCTGAATTCAAGAGTGGGGACTAAATGTTATAGGTAATTATGGACCACTCCAGAATTCAAGGAGCTAAGCAAAACAACACAACGCCAACTCGAGGAATACGATCAGGAAGCAGACCCTGATGGAGAGTCAAACGAAAGGGATTGGGCCCAGCTTGGCCCAACCCTACAACTTGGTCGAGGCCAAGGCCAATGCTCACTCGGCCCACTTGGTGGGTTGAGTCCTGCCCCCTTCGCTCAGTTCTTGGAGTCCTTGGCCGCCTCGGTTCAACCTGGTTCAGCCCAATCGGTCATGAGATGCTTAGAAACCCTAAAACAGGAGAAGGTATATAAACTCTTCTTCAACCATGAAGAAGGGACCAAAAACTCATTCTGTAAACTCTCTTCTCTTACTCTTGCTCGTGCTCTTGACTTGCTTCCCATCTTTCTCCTTGTTGACTTAAGCATCGGAGGCGGTGTGGCAAGCACCACACCAATGTGCAGTCATATCTTGTTTTGCAGGCCACGTCTTTCCCCTTTCAAACAAATTTACCGTTCGTGTCATGTGAAGGTCAGGTGA

mRNA sequence

ATGAGAGCCGAGGTGCCTCAGAAGTTCAAAATTCCCACATTCAAGTCGTATGATGGCAAGAAGGACCTCGTGCAACACCTAGACACCTACAGAACGTGGATGGACTTTCATGACATTTTAGATGCAATCAGGTGTTGTGCCTTCTCTTTCACTTTAAGAGGGTTAGCAAAGCAATGGTTTCAGAGGTTGCAAAGAAGGTCCATTAGTTCTTTCGAAGAACTAGCCCGAGCGTTCATCTCACAGTTCATGGGAGCCAGAGAACAGCGCAAGCCTCACATTAATCTTTTAACTGTCAAGCAACAACCAGGCCGAGCTGACCATGATCATGGTCGAGCCGAGCTGACCATGACCATGGCCAAGGCCGAGCACATCCCTTTGGAGTTTGTCATTGAAACCGAGGCGAGGTCGAGGCTGACCAAAGATGGCCGAGACAAAGAAAAACCCCCACTGGAGATCAGAACCATCTTTGGAGAACCAACTGGAGGAGGTTCAAGTAGAAAAAGAAAAGCTATTGCTAGAGAAGCAAGGTTTGAATCAGAATACGAAGGCCATAGCTTCAACTTATCATCAGTTGCTGAAGTTTCCAACTCAGAATGGTGTAGGGATTGTCAGAGGAGAGTAGAAGACATCGAGGGAGTGTTACTCGACAATACTGAAAGAAGTCAAGCGGCAGAAGGCCTAGGCCGACCAGGGTCGAACCGATCCGAGGCCGAGCAGGGCACACTTCCACCAACACTGAATCTGAACTTATGGAGTTTTATAGCTTCTTATGTATTGCATTTCATCACGAATATAAAATGCTCGATAATACGAAAAGTGGCCAAGGCCGATCCGATGGGTTTACCACATGTGCCACATAAATTGGATAACAAGGAATCCACACATGAGCCAACACAGGACGAGGAATTCAAGGAGCTAAGCAAAACAACACAACGCCAACTCGAGGAATACGATCAGGAAGCAGACCCTGATGGAGAGTCAAACGAAAGGGATTGGGCCCAGCTTGGCCCAACCCTACAACTTGGTCGAGGCCAAGGCCAATGCTCACTCGGCCCACTTGGTGGGTTGAGTCCTGCCCCCTTCGCTCAGTTCTTGGAGTCCTTGGCCGCCTCGGTTCAACCTGGTTCAGCCCAATCGGTCATGAGATGCTTAGAAACCCTAAAACAGGAGAAGGTATATAAACTCTTCTTCAACCATGAAGAAGGGACCAAAAACTCATTCTGTAAACTCTCTTCTCTTACTCTTGCTCGTGCTCTTGACTTGCTTCCCATCTTTCTCCTTGTTGACTTAAGCATCGGAGGCGGTGTGGCAAGCACCACACCAATGTGCAGTCATATCTTGTTTTGCAGGCCACGTCTTTCCCCTTTCAAACAAATTTACCGTTCGTGTCATGTGAAGGTCAGGTGA

Coding sequence (CDS)

ATGAGAGCCGAGGTGCCTCAGAAGTTCAAAATTCCCACATTCAAGTCGTATGATGGCAAGAAGGACCTCGTGCAACACCTAGACACCTACAGAACGTGGATGGACTTTCATGACATTTTAGATGCAATCAGGTGTTGTGCCTTCTCTTTCACTTTAAGAGGGTTAGCAAAGCAATGGTTTCAGAGGTTGCAAAGAAGGTCCATTAGTTCTTTCGAAGAACTAGCCCGAGCGTTCATCTCACAGTTCATGGGAGCCAGAGAACAGCGCAAGCCTCACATTAATCTTTTAACTGTCAAGCAACAACCAGGCCGAGCTGACCATGATCATGGTCGAGCCGAGCTGACCATGACCATGGCCAAGGCCGAGCACATCCCTTTGGAGTTTGTCATTGAAACCGAGGCGAGGTCGAGGCTGACCAAAGATGGCCGAGACAAAGAAAAACCCCCACTGGAGATCAGAACCATCTTTGGAGAACCAACTGGAGGAGGTTCAAGTAGAAAAAGAAAAGCTATTGCTAGAGAAGCAAGGTTTGAATCAGAATACGAAGGCCATAGCTTCAACTTATCATCAGTTGCTGAAGTTTCCAACTCAGAATGGTGTAGGGATTGTCAGAGGAGAGTAGAAGACATCGAGGGAGTGTTACTCGACAATACTGAAAGAAGTCAAGCGGCAGAAGGCCTAGGCCGACCAGGGTCGAACCGATCCGAGGCCGAGCAGGGCACACTTCCACCAACACTGAATCTGAACTTATGGAGTTTTATAGCTTCTTATGTATTGCATTTCATCACGAATATAAAATGCTCGATAATACGAAAAGTGGCCAAGGCCGATCCGATGGGTTTACCACATGTGCCACATAAATTGGATAACAAGGAATCCACACATGAGCCAACACAGGACGAGGAATTCAAGGAGCTAAGCAAAACAACACAACGCCAACTCGAGGAATACGATCAGGAAGCAGACCCTGATGGAGAGTCAAACGAAAGGGATTGGGCCCAGCTTGGCCCAACCCTACAACTTGGTCGAGGCCAAGGCCAATGCTCACTCGGCCCACTTGGTGGGTTGAGTCCTGCCCCCTTCGCTCAGTTCTTGGAGTCCTTGGCCGCCTCGGTTCAACCTGGTTCAGCCCAATCGGTCATGAGATGCTTAGAAACCCTAAAACAGGAGAAGGTATATAAACTCTTCTTCAACCATGAAGAAGGGACCAAAAACTCATTCTGTAAACTCTCTTCTCTTACTCTTGCTCGTGCTCTTGACTTGCTTCCCATCTTTCTCCTTGTTGACTTAAGCATCGGAGGCGGTGTGGCAAGCACCACACCAATGTGCAGTCATATCTTGTTTTGCAGGCCACGTCTTTCCCCTTTCAAACAAATTTACCGTTCGTGTCATGTGAAGGTCAGGTGA

Protein sequence

MRAEVPQKFKIPTFKSYDGKKDLVQHLDTYRTWMDFHDILDAIRCCAFSFTLRGLAKQWFQRLQRRSISSFEELARAFISQFMGAREQRKPHINLLTVKQQPGRADHDHGRAELTMTMAKAEHIPLEFVIETEARSRLTKDGRDKEKPPLEIRTIFGEPTGGGSSRKRKAIAREARFESEYEGHSFNLSSVAEVSNSEWCRDCQRRVEDIEGVLLDNTERSQAAEGLGRPGSNRSEAEQGTLPPTLNLNLWSFIASYVLHFITNIKCSIIRKVAKADPMGLPHVPHKLDNKESTHEPTQDEEFKELSKTTQRQLEEYDQEADPDGESNERDWAQLGPTLQLGRGQGQCSLGPLGGLSPAPFAQFLESLAASVQPGSAQSVMRCLETLKQEKVYKLFFNHEEGTKNSFCKLSSLTLARALDLLPIFLLVDLSIGGGVASTTPMCSHILFCRPRLSPFKQIYRSCHVKVR
Homology
[Close]
BLAST of Lag0039529 vs. NCBI nr
Match: XP_022150035.1 (uncharacterized protein LOC111018307 [Momordica charantia])

HSP 1 Score: 123.6 bits (309), Expect = 4.4e-24
Identity = 55/109 (50.46%), Postives = 79/109 (72.48%), Query Frame = 0 

Query: 1   MRAEVPQKFKIPTFKSYDGKKDLVQHLDTYRTWMDFHDILDAIRCCAFSFTLRGLAKQWF 60
           M+ +VP KFK+PT K +DG  DLV HLD YR WMD + + +A++C  FS TL G A+ WF
Sbjct: 5   MKVKVPPKFKLPTVKQFDGTVDLVDHLDAYREWMDIYGVSEAVKCRVFSTTLSGSARVWF 64

Query: 61  QRLQRRSISSFEELARAFISQFMGAREQRKPHINLLTVKQQPGRADHDH 110
           ++L+R SISSF+ LA+AF++QF+G R + +P   LLT+KQ+   + HD+
Sbjct: 65  RQLKRGSISSFKSLAKAFVTQFIGGRSRSRPVAYLLTIKQRATESLHDY 113

[Close]
BLAST of Lag0039529 vs. NCBI nr
Match: XP_022159109.1 (uncharacterized protein LOC111025548 [Momordica charantia])

HSP 1 Score: 122.9 bits (307), Expect = 7.5e-24
Identity = 58/109 (53.21%), Postives = 78/109 (71.56%), Query Frame = 0 

Query: 1   MRAEVPQKFKIPTFKSYDGKKDLVQHLDTYRTWMDFHDILDAIRCCAFSFTLRGLAKQWF 60
           MR +VP KFK+PT K +DG  + V HLD YR WMD + + DAIRC  FS TL G A+ WF
Sbjct: 90  MREKVPPKFKLPTVKPFDGMTEPVDHLDAYREWMDIYGVSDAIRCRVFSTTLNGSARIWF 149

Query: 61  QRLQRRSISSFEELARAFISQFMGAREQRKPHINLLTVKQQPGRADHDH 110
           ++L+R SISSF+ LARAF++QF+G R + +P   LLT+KQ+   + HD+
Sbjct: 150 RQLKRGSISSFKSLARAFMTQFVGGRCRSRPVAYLLTIKQRTAESLHDY 198

[Close]
BLAST of Lag0039529 vs. NCBI nr
Match: XP_022147761.1 (uncharacterized protein LOC111016619 [Momordica charantia])

HSP 1 Score: 119.0 bits (297), Expect = 1.1e-22
Identity = 55/109 (50.46%), Postives = 74/109 (67.89%), Query Frame = 0 

Query: 1   MRAEVPQKFKIPTFKSYDGKKDLVQHLDTYRTWMDFHDILDAIRCCAFSFTLRGLAKQWF 60
           M+ +VP KFK+P  K YDG  D + HLD Y  W D + I +AIRC  FSFTL G  + WF
Sbjct: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60

Query: 61  QRLQRRSISSFEELARAFISQFMGAREQRKPHINLLTVKQQPGRADHDH 110
           Q+L+R+SISSF+ELARAF++QF G   + +P   LLT+KQ+   +  D+
Sbjct: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDY 109

[Close]
BLAST of Lag0039529 vs. NCBI nr
Match: XP_022158344.1 (uncharacterized protein LOC111024851 [Momordica charantia])

HSP 1 Score: 118.2 bits (295), Expect = 1.9e-22
Identity = 54/101 (53.47%), Postives = 71/101 (70.30%), Query Frame = 0 

Query: 1   MRAEVPQKFKIPTFKSYDGKKDLVQHLDTYRTWMDFHDILDAIRCCAFSFTLRGLAKQWF 60
           M+ +   KFK+P    YDG  D + HLD YR W D +DI +AIRC  FSFTL G A+ WF
Sbjct: 1   MKEKARPKFKLPAIAEYDGSADPIDHLDAYREWADIYDIREAIRCRVFSFTLTGSARNWF 60

Query: 61  QRLQRRSISSFEELARAFISQFMGAREQRKPHINLLTVKQQ 102
           ++L+R SISSF+ELA AF++QF+G R + KP   LLT+KQ+
Sbjct: 61  RQLKRNSISSFKELAEAFVTQFVGGRVKSKPVTYLLTIKQK 101

[Close]
BLAST of Lag0039529 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 117.1 bits (292), Expect = 4.1e-22
Identity = 55/109 (50.46%), Postives = 76/109 (69.72%), Query Frame = 0 

Query: 1   MRAEVPQKFKIPTFKSYDGKKDLVQHLDTYRTWMDFHDILDAIRCCAFSFTLRGLAKQWF 60
           MR +VP KFK+PT K +D   D V HLD YR WMD + + +A+RC  FS TL G A+ WF
Sbjct: 185 MREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLNGSARIWF 244

Query: 61  QRLQRRSISSFEELARAFISQFMGAREQRKPHINLLTVKQQPGRADHDH 110
           ++L+R SISSF+ LARAF++QF+G R + +P   LLT+KQ+   +  D+
Sbjct: 245 RQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLRDY 293

[Close]
BLAST of Lag0039529 vs. ExPASy TrEMBL
Match: A0A6J1D7D2 (uncharacterized protein LOC111018307 OS=Momordica charantia OX=3673 GN=LOC111018307 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-24
Identity = 55/109 (50.46%), Postives = 79/109 (72.48%), Query Frame = 0 

Query: 1   MRAEVPQKFKIPTFKSYDGKKDLVQHLDTYRTWMDFHDILDAIRCCAFSFTLRGLAKQWF 60
           M+ +VP KFK+PT K +DG  DLV HLD YR WMD + + +A++C  FS TL G A+ WF
Sbjct: 5   MKVKVPPKFKLPTVKQFDGTVDLVDHLDAYREWMDIYGVSEAVKCRVFSTTLSGSARVWF 64

Query: 61  QRLQRRSISSFEELARAFISQFMGAREQRKPHINLLTVKQQPGRADHDH 110
           ++L+R SISSF+ LA+AF++QF+G R + +P   LLT+KQ+   + HD+
Sbjct: 65  RQLKRGSISSFKSLAKAFVTQFIGGRSRSRPVAYLLTIKQRATESLHDY 113

[Close]
BLAST of Lag0039529 vs. ExPASy TrEMBL
Match: A0A6J1E1E7 (uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025548 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.6e-24
Identity = 58/109 (53.21%), Postives = 78/109 (71.56%), Query Frame = 0 

Query: 1   MRAEVPQKFKIPTFKSYDGKKDLVQHLDTYRTWMDFHDILDAIRCCAFSFTLRGLAKQWF 60
           MR +VP KFK+PT K +DG  + V HLD YR WMD + + DAIRC  FS TL G A+ WF
Sbjct: 90  MREKVPPKFKLPTVKPFDGMTEPVDHLDAYREWMDIYGVSDAIRCRVFSTTLNGSARIWF 149

Query: 61  QRLQRRSISSFEELARAFISQFMGAREQRKPHINLLTVKQQPGRADHDH 110
           ++L+R SISSF+ LARAF++QF+G R + +P   LLT+KQ+   + HD+
Sbjct: 150 RQLKRGSISSFKSLARAFMTQFVGGRCRSRPVAYLLTIKQRTAESLHDY 198

[Close]
BLAST of Lag0039529 vs. ExPASy TrEMBL
Match: A0A6J1D3B7 (uncharacterized protein LOC111016619 OS=Momordica charantia OX=3673 GN=LOC111016619 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.3e-23
Identity = 55/109 (50.46%), Postives = 74/109 (67.89%), Query Frame = 0 

Query: 1   MRAEVPQKFKIPTFKSYDGKKDLVQHLDTYRTWMDFHDILDAIRCCAFSFTLRGLAKQWF 60
           M+ +VP KFK+P  K YDG  D + HLD Y  W D + I +AIRC  FSFTL G  + WF
Sbjct: 1   MKEKVPPKFKLPAIKKYDGSTDPIDHLDVYHEWTDIYGITEAIRCRVFSFTLTGSTRIWF 60

Query: 61  QRLQRRSISSFEELARAFISQFMGAREQRKPHINLLTVKQQPGRADHDH 110
           Q+L+R+SISSF+ELARAF++QF G   + +P   LLT+KQ+   +  D+
Sbjct: 61  QQLKRKSISSFKELARAFVTQFAGGWNRSRPVAYLLTIKQKATESLKDY 109

[Close]
BLAST of Lag0039529 vs. ExPASy TrEMBL
Match: A0A6J1DZ49 (uncharacterized protein LOC111024851 OS=Momordica charantia OX=3673 GN=LOC111024851 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 9.0e-23
Identity = 54/101 (53.47%), Postives = 71/101 (70.30%), Query Frame = 0 

Query: 1   MRAEVPQKFKIPTFKSYDGKKDLVQHLDTYRTWMDFHDILDAIRCCAFSFTLRGLAKQWF 60
           M+ +   KFK+P    YDG  D + HLD YR W D +DI +AIRC  FSFTL G A+ WF
Sbjct: 1   MKEKARPKFKLPAIAEYDGSADPIDHLDAYREWADIYDIREAIRCRVFSFTLTGSARNWF 60

Query: 61  QRLQRRSISSFEELARAFISQFMGAREQRKPHINLLTVKQQ 102
           ++L+R SISSF+ELA AF++QF+G R + KP   LLT+KQ+
Sbjct: 61  RQLKRNSISSFKELAEAFVTQFVGGRVKSKPVTYLLTIKQK 101

[Close]
BLAST of Lag0039529 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-22
Identity = 55/109 (50.46%), Postives = 76/109 (69.72%), Query Frame = 0 

Query: 1   MRAEVPQKFKIPTFKSYDGKKDLVQHLDTYRTWMDFHDILDAIRCCAFSFTLRGLAKQWF 60
           MR +VP KFK+PT K +D   D V HLD YR WMD + + +A+RC  FS TL G A+ WF
Sbjct: 185 MREKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLNGSARIWF 244

Query: 61  QRLQRRSISSFEELARAFISQFMGAREQRKPHINLLTVKQQPGRADHDH 110
           ++L+R SISSF+ LARAF++QF+G R + +P   LLT+KQ+   +  D+
Sbjct: 245 RQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLRDY 293

The following BLAST results are available for this feature:
BLAST of Lag0039529 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022150035.14.4e-2450.46uncharacterized protein LOC111018307 [Momordica charantia][more]
XP_022159109.17.5e-2453.21uncharacterized protein LOC111025548 [Momordica charantia][more]
XP_022147761.11.1e-2250.46uncharacterized protein LOC111016619 [Momordica charantia][more]
XP_022158344.11.9e-2253.47uncharacterized protein LOC111024851 [Momordica charantia][more]
XP_022158830.14.1e-2250.46uncharacterized protein LOC111025293 [Momordica charantia][more]
BLAST of Lag0039529 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0039529 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D7D22.1e-2450.46uncharacterized protein LOC111018307 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1E1E73.6e-2453.21uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1D3B75.3e-2350.46uncharacterized protein LOC111016619 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A6J1DZ499.0e-2353.47uncharacterized protein LOC111024851 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1DWY02.0e-2250.46uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
BLAST of Lag0039529 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 48..101
e-value: 5.0E-7
score: 29.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..310

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0039529.1Lag0039529.1mRNA