Lag0039486 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0039486
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Locationchr2: 44721541 .. 44724928 (+)
RNA-Seq ExpressionLag0039486
SyntenyLag0039486
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTACTACCCATGTTTAGTCTGGTGGATGGTTTGATATCTTTTTGGAGCCAAGATTTTATGGCTGCTGAGAAATATTTTGCACAAGCATGTTCTTTGGGACATGATGATGTCTGTCTCCTCCTCTGTCATGGTATCTTCTTGTCAATTGGACTCCAAAATGCAAGCTATTTCTTCCTAAATGCTTTTTATATTTTCTGTGGGGATTGCGTTGCTATGTTCTGCATTTTCGTTCTTTTTTATTCTTTCTAGAATTATTTGTTTTCACTCTACATGAATTGTCATCCTATCATTATGGATTCTTAACCCTTCAGTATTTTTAATCTCTGTTAAGGTTTTCATTTGTGATGTGCTTTTTTATTTATTTAATCCCTAATGAACTCAGGTGTAGCCTGCATGGAACTTGCAAAGCAGCTTTGCAGTTCTCATTTCTTGATGATGGCTGTGAACAGTCTCCTTAAAGCTCAAGTAATTTCTGTTGTTCCAATACCAACTGTCTCGATCATACTGGCTCAAGCAGAAGGGAGCCTTGGTTTGAAAGAAAATTGGGAGTCATATCTTCGTTTTGAATGGTTCTCGTGGCCCCCAGGTTTATCTAGGTAACTGTGGTTGTCCATTTTTATTTAACTTTTTAATCTAAGATGATTGTTGTGGCCATTCTCATTGAGAGGTTGGGAGTAACCTTCTATCATGTGTTGAGGTTGACACTATTTAACTATTCACTTAGGGGGTGTTTGGGACACAGAGTTGAGTTATGAAGTCTGGAGTTGTTTTATCTTAGAAGTTCGAGTAGGAGTTAATAAGTATGTGGGACCTACAATAAAGTAGTGCAATTTGAGTTAAAAAGTTTGTGGGACCCACAATAGAGTGTTGATTGGTTGATAAATTTGTGGGTCCCACATTTGAATGTTGTATATCCTTGGGCCAAACAAGGAGCTGGGTGGAGTTATTAACTGTTAGCATAAATATTTCCCTTGATTGTATTCATTTCTGTTGGTTTTATTTTCTATTATTTGCTGTAATGTTGGTTATTTCTTTATTCCCTTGTATCAGGACACTTGTCCTAAGAACCTTCTATTTATTCTCAATGATTCGGCCTGAGTGTGTGTGCTGAGCATATTTTCCTCACTCTCATTTTATCATTTTTACGACTATTATGGTATCAGAGCCCTGGTGATTTTTTTTCCAGTGTCTCTTTCTCCTCTGATTTGCTATGGTGTCTCCTTCCAGCACCTCGTCAACTGCCGATGATCGATTGTTGGTTCTTCCTCTTGTCTCTTCCTCTGTAATCACCACTTCGGTGAGCTCACCAATTTCTTCCCAACGTGTTCAACAAAATCCCCTCTCCACTGGTACCCATACTCGCCCATTAAATCCTACCGTCCCTCCTTTCCAATCTTCTACTCAGCCCTCGATTCCTCAGTTTTATCCCCCACGATACAATCCCTCGGTTACGGCTGGTTTTCAGTTTCCCCCGCAATCCACCTCTTCTCTGCCCTTCTTTCCTCAATATAATCCCTCTGTTCCACTTTTTTCATCTCCTCAGACATCGTCCAACCCTTTCTCTACCCTAACCCCACCCTTTGGTATCAAACTTTCTGATTCGAACTACTTGCTTTGGAAGAACCAGCTTCTCAATCACATAATTGCTTTCGACATGGAGAGCTTTATCAACGGCACTCCAGCCCCGCCAAAATTCTTGGACACTGCTCAAACTCAAGTAAGTCCTCACTACCTTATTTGGCAGAAGTTTAATCGCACTCTCATGGGATGGATTTACTCTTCCTTAAATGAAGATAAATTAGGGGAAATTATTGGTTGTAATACTGCTTATGAAATATGGGAGCATCTGCGTATTGTGTATGAATCTTTATCGACTGCTAGGATAATGGGCCTTAGGTCTCAGGTACAGAAAATCAGAAAGGATGGCCTCACCGTATCTCAATATCTTGCTCAGATAAAGGACATTGCCGATAAGTTTTCAGCTATAGGGGAACCACTCTCATACTGTGACCATTTGGGGTATATTTTAGAAGGCTTAGGAACCGATTACAATCCCTTTGTCACCTCTATTCACAACAGAACAGAAAAACCTTCCTTGGCCGATGTCCTCAGTTTGTTGCTTGCTTACGAGGCACGTCTTGAGAAACAGTCGACTGTTGATAGCCTTAACCTTGTGCAAGCCAATCTTGCGAATTTATCTGTGTCAAACAATGTCAGGCGTTCCCCTCGCCCTCCGAATCCCTCAAAGCAATCCATCCCCTCTAAACCTCCTTCCACATTTTCCTTTCCCCAATCCTTTCAACCTAATTTTTCAGGTCAGAGTGTCCTTGGTCGCCCACAGTCCTCCCCACGTCCACCTCGCTGGCCTTCCTCAAATTCATCACGCCCACAATGCCAAATATGTAACAAATTTGGGCATACTGCCCTTGCTTGTTATAATCGACATAATCCAGCTTATCAAGCTCCTCCTTCTGGTCATTCCCCTCAATTTTATTTTAACCAGTTTTCCCAAACTTCACCTCTCTCCCAACCTCTGTCATCTACCTCTCCTGATACAAACACCAATTCTCAGCCCCCAACTCACCCGCATGAGGCTTGGTATATGGATTTCGGAGCAACTCACCATATGACTCCGGATATCAACAATCTTCAGCAGTCAACCCCCTACTATGGTAGCGAGCAAGTTGTTGTTGGCAACGGTAAGTCCATTCCAGTCCTTCATGTTGGGTCCTCTACTATTTCATCGTCTTCTTTTCCAATTCAGTTGAAGTCTGTATTGCATTCTCCTCATATATCCCATAATCTTATTAGCATTGCTAAGTTGTGTCTTGAAAATAGGGCTTTTGTTGAGTTTCATCCATCCTTTTTTCTTGTGAAGGATCTTCTATCCAAGAGCATTCTACTCACGGGTCAGCTTGAAGGGGGCCTTTATAAGCTTTCAGTCAAGTTTGTTCTACCTTCCTTGCATTCTCAGTCTCAACAATTGATAGCGAGCATAGCTAGCTACTTTTACTTATTCAATTTAGCTAGTCTTTTATGTTGTTTGGGCCATTTTATTGTGCTTTATTGTTTATTTTGTAGGAAATGGTTGATTGGAGCTATAATGCCATATTAGAGTTAATCGGGTGCTCGGGGTGCGAAAAGATGCATAGGAATGAAAAGAGTAAAAGAGAAAAAAGTCAAATCTCGGTCAACAGCAGGCTAGCGTCGAGACGCTAGCTCTTGAGCGTCGAGACGCTCACATTCATATCAGATTAGGCGCGTAAAGCTCACAGCGTCGAGACGCTGTGATAGGAAGCGTCCTGACGCTACCGTTTTTCCTTATTCAGAACGCGCGTATAAGAGGCAACGTCGCGACGCTGTCTTGACAGCGTCTCGACGCTAA

mRNA sequence

ATGTTACTACCCATGTTTAGTCTGGTGGATGGTTTGATATCTTTTTGGAGCCAAGATTTTATGGCTGCTGAGAAATATTTTGCACAAGCATGTTCTTTGGGACATGATGATGTCTGTCTCCTCCTCTGTCATGGTGTAGCCTGCATGGAACTTGCAAAGCAGCTTTGCAGTTCTCATTTCTTGATGATGGCTGTGAACAGTCTCCTTAAAGCTCAAGTAATTTCTGTTGTTCCAATACCAACTGTCTCGATCATACTGGCTCAAGCAGAAGGGAGCCTTGGTTTGAAAGAAAATTGGGAGTCATATCTTCGTTTTGAATGGTTCTCGTGGCCCCCAGGTTTATCTAGCACCTCGTCAACTGCCGATGATCGATTGTTGGTTCTTCCTCTTGTCTCTTCCTCTGTAATCACCACTTCGGTGAGCTCACCAATTTCTTCCCAACGTGTTCAACAAAATCCCCTCTCCACTGGTACCCATACTCGCCCATTAAATCCTACCGTCCCTCCTTTCCAATCTTCTACTCAGCCCTCGATTCCTCAGTTTTATCCCCCACGATACAATCCCTCGGTTACGGCTGGTTTTCAGTTTCCCCCGCAATCCACCTCTTCTCTGCCCTTCTTTCCTCAATATAATCCCTCTGTTCCACTTTTTTCATCTCCTCAGACATCGTCCAACCCTTTCTCTACCCTAACCCCACCCTTTGGTATCAAACTTTCTGATTCGAACTACTTGCTTTGGAAGAACCAGCTTCTCAATCACATAATTGCTTTCGACATGGAGAGCTTTATCAACGGCACTCCAGCCCCGCCAAAATTCTTGGACACTGCTCAAACTCAAGTAAGTCCTCACTACCTTATTTGGCAGAAGTTTAATCGCACTCTCATGGGATGGATTTACTCTTCCTTAAATGAAGATAAATTAGGGGAAATTATTGGTTGTAATACTGCTTATGAAATATGGGAGCATCTGCGTATTGTGTATGAATCTTTATCGACTGCTAGGATAATGGGCCTTAGGTCTCAGGTACAGAAAATCAGAAAGGATGGCCTCACCGTATCTCAATATCTTGCTCAGATAAAGGACATTGCCGATAAGTTTTCAGCTATAGGGGAACCACTCTCATACTGTGACCATTTGGGGTATATTTTAGAAGGCTTAGGAACCGATTACAATCCCTTTGTCACCTCTATTCACAACAGAACAGAAAAACCTTCCTTGGCCGATGTCCTCAGTTTGTTGCTTGCTTACGAGGCACGTCTTGAGAAACAGTCGACTGTTGATAGCCTTAACCTTGTGCAAGCCAATCTTGCGAATTTATCTGTGTCAAACAATGTCAGGCGTTCCCCTCGCCCTCCGAATCCCTCAAAGCAATCCATCCCCTCTAAACCTCCTTCCACATTTTCCTTTCCCCAATCCTTTCAACCTAATTTTTCAGGTCAGAGTGTCCTTGGTCGCCCACAGTCCTCCCCACGTCCACCTCGCTGGCCTTCCTCAAATTCATCACGCCCACAATGCCAAATATGTAACAAATTTGGGCATACTGCCCTTGCTTGTTATAATCGACATAATCCAGCTTATCAAGCTCCTCCTTCTGGTCATTCCCCTCAATTTTATTTTAACCAGTTTTCCCAAACTTCACCTCTCTCCCAACCTCTGTCATCTACCTCTCCTGATACAAACACCAATTCTCAGCCCCCAACTCACCCGCATGAGGCTTGGTATATGGATTTCGGAGCAACTCACCATATGACTCCGGATATCAACAATCTTCAGCAGTCAACCCCCTACTATGGTAGCGAGCAAGTTGTTGTTGGCAACGGTAAGTCCATTCCAGTCCTTCATGTTGGGTCCTCTACTATTTCATCGTCTTCTTTTCCAATTCAGTTGAAGTCTGTATTGCATTCTCCTCATATATCCCATAATCTTATTAGCATTGCTAAGTTGTGTCTTGAAAATAGGGCTTTTGTTGAGTTTCATCCATCCTTTTTTCTTGTGAAGGATCTTCTATCCAAGAGCATTCTACTCACGGGTCAGCTTGAAGGGGGCCTTTATAAGCTTTCAGTCAAGCGCGTAAAGCTCACAGCGTCGAGACGCTGTGATAGGAAGCGTCCTGACGCTACCGTTTTTCCTTATTCAGAACGCGCGTATAAGAGGCAACGTCGCGACGCTGTCTTGACAGCGTCTCGACGCTAA

Coding sequence (CDS)

ATGTTACTACCCATGTTTAGTCTGGTGGATGGTTTGATATCTTTTTGGAGCCAAGATTTTATGGCTGCTGAGAAATATTTTGCACAAGCATGTTCTTTGGGACATGATGATGTCTGTCTCCTCCTCTGTCATGGTGTAGCCTGCATGGAACTTGCAAAGCAGCTTTGCAGTTCTCATTTCTTGATGATGGCTGTGAACAGTCTCCTTAAAGCTCAAGTAATTTCTGTTGTTCCAATACCAACTGTCTCGATCATACTGGCTCAAGCAGAAGGGAGCCTTGGTTTGAAAGAAAATTGGGAGTCATATCTTCGTTTTGAATGGTTCTCGTGGCCCCCAGGTTTATCTAGCACCTCGTCAACTGCCGATGATCGATTGTTGGTTCTTCCTCTTGTCTCTTCCTCTGTAATCACCACTTCGGTGAGCTCACCAATTTCTTCCCAACGTGTTCAACAAAATCCCCTCTCCACTGGTACCCATACTCGCCCATTAAATCCTACCGTCCCTCCTTTCCAATCTTCTACTCAGCCCTCGATTCCTCAGTTTTATCCCCCACGATACAATCCCTCGGTTACGGCTGGTTTTCAGTTTCCCCCGCAATCCACCTCTTCTCTGCCCTTCTTTCCTCAATATAATCCCTCTGTTCCACTTTTTTCATCTCCTCAGACATCGTCCAACCCTTTCTCTACCCTAACCCCACCCTTTGGTATCAAACTTTCTGATTCGAACTACTTGCTTTGGAAGAACCAGCTTCTCAATCACATAATTGCTTTCGACATGGAGAGCTTTATCAACGGCACTCCAGCCCCGCCAAAATTCTTGGACACTGCTCAAACTCAAGTAAGTCCTCACTACCTTATTTGGCAGAAGTTTAATCGCACTCTCATGGGATGGATTTACTCTTCCTTAAATGAAGATAAATTAGGGGAAATTATTGGTTGTAATACTGCTTATGAAATATGGGAGCATCTGCGTATTGTGTATGAATCTTTATCGACTGCTAGGATAATGGGCCTTAGGTCTCAGGTACAGAAAATCAGAAAGGATGGCCTCACCGTATCTCAATATCTTGCTCAGATAAAGGACATTGCCGATAAGTTTTCAGCTATAGGGGAACCACTCTCATACTGTGACCATTTGGGGTATATTTTAGAAGGCTTAGGAACCGATTACAATCCCTTTGTCACCTCTATTCACAACAGAACAGAAAAACCTTCCTTGGCCGATGTCCTCAGTTTGTTGCTTGCTTACGAGGCACGTCTTGAGAAACAGTCGACTGTTGATAGCCTTAACCTTGTGCAAGCCAATCTTGCGAATTTATCTGTGTCAAACAATGTCAGGCGTTCCCCTCGCCCTCCGAATCCCTCAAAGCAATCCATCCCCTCTAAACCTCCTTCCACATTTTCCTTTCCCCAATCCTTTCAACCTAATTTTTCAGGTCAGAGTGTCCTTGGTCGCCCACAGTCCTCCCCACGTCCACCTCGCTGGCCTTCCTCAAATTCATCACGCCCACAATGCCAAATATGTAACAAATTTGGGCATACTGCCCTTGCTTGTTATAATCGACATAATCCAGCTTATCAAGCTCCTCCTTCTGGTCATTCCCCTCAATTTTATTTTAACCAGTTTTCCCAAACTTCACCTCTCTCCCAACCTCTGTCATCTACCTCTCCTGATACAAACACCAATTCTCAGCCCCCAACTCACCCGCATGAGGCTTGGTATATGGATTTCGGAGCAACTCACCATATGACTCCGGATATCAACAATCTTCAGCAGTCAACCCCCTACTATGGTAGCGAGCAAGTTGTTGTTGGCAACGGTAAGTCCATTCCAGTCCTTCATGTTGGGTCCTCTACTATTTCATCGTCTTCTTTTCCAATTCAGTTGAAGTCTGTATTGCATTCTCCTCATATATCCCATAATCTTATTAGCATTGCTAAGTTGTGTCTTGAAAATAGGGCTTTTGTTGAGTTTCATCCATCCTTTTTTCTTGTGAAGGATCTTCTATCCAAGAGCATTCTACTCACGGGTCAGCTTGAAGGGGGCCTTTATAAGCTTTCAGTCAAGCGCGTAAAGCTCACAGCGTCGAGACGCTGTGATAGGAAGCGTCCTGACGCTACCGTTTTTCCTTATTCAGAACGCGCGTATAAGAGGCAACGTCGCGACGCTGTCTTGACAGCGTCTCGACGCTAA

Protein sequence

MLLPMFSLVDGLISFWSQDFMAAEKYFAQACSLGHDDVCLLLCHGVACMELAKQLCSSHFLMMAVNSLLKAQVISVVPIPTVSIILAQAEGSLGLKENWESYLRFEWFSWPPGLSSTSSTADDRLLVLPLVSSSVITTSVSSPISSQRVQQNPLSTGTHTRPLNPTVPPFQSSTQPSIPQFYPPRYNPSVTAGFQFPPQSTSSLPFFPQYNPSVPLFSSPQTSSNPFSTLTPPFGIKLSDSNYLLWKNQLLNHIIAFDMESFINGTPAPPKFLDTAQTQVSPHYLIWQKFNRTLMGWIYSSLNEDKLGEIIGCNTAYEIWEHLRIVYESLSTARIMGLRSQVQKIRKDGLTVSQYLAQIKDIADKFSAIGEPLSYCDHLGYILEGLGTDYNPFVTSIHNRTEKPSLADVLSLLLAYEARLEKQSTVDSLNLVQANLANLSVSNNVRRSPRPPNPSKQSIPSKPPSTFSFPQSFQPNFSGQSVLGRPQSSPRPPRWPSSNSSRPQCQICNKFGHTALACYNRHNPAYQAPPSGHSPQFYFNQFSQTSPLSQPLSSTSPDTNTNSQPPTHPHEAWYMDFGATHHMTPDINNLQQSTPYYGSEQVVVGNGKSIPVLHVGSSTISSSSFPIQLKSVLHSPHISHNLISIAKLCLENRAFVEFHPSFFLVKDLLSKSILLTGQLEGGLYKLSVKRVKLTASRRCDRKRPDATVFPYSERAYKRQRRDAVLTASRR
Homology
BLAST of Lag0039486 vs. NCBI nr
Match: XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia])

HSP 1 Score: 380.6 bits (976), Expect = 3.1e-101
Identity = 214/420 (50.95%), Postives = 277/420 (65.95%), Query Frame = 0

Query: 195 QFPPQSTSSLPFFPQYNPSVPLFSSPQTSSNPFSTLTPPFGIKLSDSNYLLWKNQLLNHI 254
           QFPP + + L   P  NP          S+NPF TL  P  +KL+D+N+LLWKNQLLN +
Sbjct: 2   QFPPPTPNFLAQPP--NP---------FSANPFPTLPQPLNVKLNDNNFLLWKNQLLNAV 61

Query: 255 IAFDMESFINGT-PAPPKFLDTAQTQVSPHYLIWQKFNRTLMGWIYSSLNEDKLGEIIGC 314
           IA  +  +++GT   PP+FLD  Q Q +P Y  W+++NR LM WIYSSL+E+K+GE++  
Sbjct: 62  IANGLRGYLDGTIMPPPQFLDHHQLQPNPAYYAWERYNRLLMCWIYSSLSEEKMGEVVSL 121

Query: 315 NTAYEIWEHLRIVYESLSTARIMGLRSQVQKIRKDGLTVSQYLAQIKDIADKFSAIGEPL 374
            T ++IW  L  VY+S +TARIMGL++++Q +RKDG +VSQYLA+IK+IADKF+A+GEPL
Sbjct: 122 ETTHDIWSSLTRVYDSKTTARIMGLKTELQNLRKDGSSVSQYLAKIKEIADKFAAVGEPL 181

Query: 375 SYCDHLGYILEGLGTDYNPFVTSIHNRTEKPSLADVLSLLLAYEARLEKQSTVDSLNLVQ 434
           SY DHL ++L+GLG++YN FVTSIHNR + PSL DV SLLLAYEARL+KQ+TVD LN+ Q
Sbjct: 182 SYRDHLAHVLDGLGSEYNAFVTSIHNRADSPSLEDVRSLLLAYEARLDKQNTVDQLNIAQ 241

Query: 435 ANLANLSVSNNVRRSPRP---PNPSKQSIPSKPPSTFSFPQSFQPNFSGQSVLGRPQSSP 494
           ANL NLS+ +N +R P     PN  K S P+ P S              QS+LG+PQS  
Sbjct: 242 ANLVNLSLQHNSKRPPPKFSFPNHYKHSFPNSPISA----------AQSQSILGKPQSVH 301

Query: 495 RPPRWPSSNSSRPQCQICNKFGHTALACYNRHNPAYQAPPSGHSPQFYFNQFSQTSPLSQ 554
           + P  P  +SS+ QCQIC K GH+A  CY+R N AY       SPQ  ++         Q
Sbjct: 302 KWP--PKPSSSKIQCQICGKLGHSAAVCYHRTNIAYH----NASPQALYHHV-------Q 361

Query: 555 PLSSTSPDTNTNSQPPTHPHEAWYMDFGATHHMTPDINNLQQSTPYYGSEQVVVGNGKSI 611
           P S T P +    Q   HP E+W+MD GATHHMTPD + L   TPY G EQV VGNG S+
Sbjct: 362 P-SPTHPSSGHEFQ---HPDESWFMDSGATHHMTPDSSILCNPTPYSGGEQVTVGNGSSV 383

BLAST of Lag0039486 vs. NCBI nr
Match: GFZ12741.1 (UBX domain-containing protein [Actinidia rufa])

HSP 1 Score: 328.2 bits (840), Expect = 1.8e-85
Identity = 196/516 (37.98%), Postives = 290/516 (56.20%), Query Frame = 0

Query: 172 SSTQPSIPQFYPPRYNPSVTAGFQFPPQSTSSLPFFPQYNPSVPLFSSPQTSSNPFSTLT 231
           SST P+ P   PP  NP  ++    P          PQ   + PL + P        ++ 
Sbjct: 9   SSTPPAPP---PPTSNPLPSSSIPKPN---------PQIINTSPLLNMP--------SIN 68

Query: 232 PPFGIKLSDSNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDTAQTQVSPHYLIWQKF 291
            P  +KL D NY++WK QLLN +IA  +E F++G+   PP+FLD  Q Q +P +  WQ++
Sbjct: 69  QPLAVKLDDHNYIIWKEQLLNIVIANGLEEFLDGSRVCPPRFLDPQQQQSNPEFHSWQRY 128

Query: 292 NRTLMGWIYSSLNEDKLGEIIGCNTAYEIWEHLRIVYESLSTARIMGLRSQVQKIRKDGL 351
           NR +M WIY+S+NE  LG+I+G  +A +IWE L  +Y + S A +  LR+ +Q I+K+GL
Sbjct: 129 NRLVMSWIYASINESMLGQIVGYTSASQIWEALERLYAAASFAHLTELRTALQTIKKEGL 188

Query: 352 TVSQYLAQIKDIADKFSAIGEPLSYCDHLGYILEGLGTDYNPFVTSIHNRTEKPSLADVL 411
           T   Y+ + + + +  ++IGEP++Y DHL Y L GLG DYNPFVTSI ++  +PS+ +  
Sbjct: 189 TALAYIQKFRHLCNSLASIGEPVTYTDHLIYFLGGLGRDYNPFVTSIQSQAIRPSVEEPT 248

Query: 412 SLLLAYEARLEKQSTVDSLNLVQANLANLSVSNNVRRSPRPPNPSKQSIPSKPPSTFSFP 471
           S                                ++ R P+  NPS  S P+   +++S P
Sbjct: 249 S------------------------------PTSLTRKPKFKNPSTNSFPNS--NSYSHP 308

Query: 472 QSFQPNFSGQSVLGRPQSSPRPPRWPSSNSSRPQCQICNKFGHTALACYNRHNPAYQAPP 531
           +    N         P  SP     PSS   RP+CQIC K GHTA  CY+  N  YQ PP
Sbjct: 309 RGQNRN---------PSYSPN----PSSPKPRPRCQICLKPGHTANKCYHHTNLNYQPPP 368

Query: 532 SGHSPQFYFNQFSQTSPLSQPLSSTSPDTNTNSQPPTHPHEAWYMDFGATHHMTPDINNL 591
               P   FN +   +P S   SS  P     S P +    +WYMD GA+HH TPD+N L
Sbjct: 369 ---PPPRNFNAYITPNP-SLSTSSNQPAMLLLSLPDS----SWYMDSGASHHFTPDLNML 428

Query: 592 QQSTPYYGSEQVVVGNGKSIPVLHVGSSTISSSSFPIQLKSVLHSPHISHNLISIAKLCL 651
             ++PY G +QV VGNGK+ P+ ++G +++ + +  ++L  V HSP ++ NL+S+++LC 
Sbjct: 429 DSASPYTGMDQVTVGNGKTSPISNIGHASLPAYNSILKLHHVYHSPSLNKNLLSVSRLCT 451

Query: 652 ENRAFVEFHPSFFLVKDLLSKSILLTGQLEGGLYKL 687
           +N AF+EF+P+FFLVK  ++K +LL GQL+ GLY++
Sbjct: 489 DNHAFIEFYPTFFLVKHQVTKQLLLRGQLDKGLYRV 451

BLAST of Lag0039486 vs. NCBI nr
Match: RVW69807.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])

HSP 1 Score: 322.8 bits (826), Expect = 7.7e-84
Identity = 208/534 (38.95%), Postives = 291/534 (54.49%), Query Frame = 0

Query: 212 PSVPLFSSPQTSSN-------------PFSTLTPPFGIKLSDSNYLLWKNQLLNHIIAFD 271
           P  P  +S  T++N             P  +L+    IKL ++N LL K+QLLN IIA  
Sbjct: 5   PPTPASNSNTTTNNNQNPAPQITQMTLPSPSLSQSLSIKLDETNLLLRKSQLLNVIIANG 64

Query: 272 MESFIN-GTPAPPKFLDTAQTQVSPHYLIWQKFNRTLMGWIYSSLNEDKLGEIIGCNTAY 331
           +E FI+    +PPK+LD A  QV+P ++ W + N+ +M WIYSSL    +G+I+  +TA 
Sbjct: 65  LEDFIDPDQSSPPKYLDAACRQVNPEFVQWDRLNQLVMSWIYSSLTPGMVGQIVEYSTAR 124

Query: 332 EIWEHLRIVYESLSTARIMGLRSQVQKIRKDGLTVSQYLAQIKDIADKFSAIGEPLSYCD 391
           +IW  L   YES S A +M L SQ+Q+I+K  + +S+YL+++K + D+F+ IGEPLSY D
Sbjct: 125 DIWASLNDEYESPSIATVMSLNSQLQRIKKIDIPLSEYLSRLKFVFDEFATIGEPLSYRD 184

Query: 392 HLGYILEGLGTDYNPFVTSIHNRTEKPSLADVLSLLLAYEARLEKQSTVDSLNLVQANLA 451
            L  ILEGL  +Y+ FVTSIHNR+++PSL +V SLL  YE RL ++S   +LN  QAN  
Sbjct: 185 KLTRILEGLPEEYDNFVTSIHNRSDRPSLQEVHSLLHTYEYRLSQRSMDQNLNFPQAN-- 244

Query: 452 NLSVSNNVRRSPRPPNPSKQSIPSKPPSTFSFPQSFQPNFSGQSVLGRPQSSPRPPRWPS 511
                                                                  PR P 
Sbjct: 245 -------------------------------------------------------PRQPG 304

Query: 512 SNSSRPQCQICNKFGHTALACYNRHNPAYQAPPSGHSPQFYFNQFSQT-SPLSQPLSSTS 571
            N+S PQCQIC K GH AL  Y+R N  Y  P   ++  F  N   QT SP+S  L++++
Sbjct: 305 YNNSIPQCQICGKSGHIALNGYHRTNLTYHPPVFPNAAAFNPNGPGQTSSPISAMLTTSA 364

Query: 572 PDTNTNSQPPTHPHEAWYMDFGATHHMTPDINNLQQSTPYYGSEQVVVGNGKSIPVLHVG 631
             T  +SQ   +   +WYMD GATHH TP+  ++  +  Y   +  +VGN K I + H+G
Sbjct: 365 APTGLSSQSSDN---SWYMDSGATHHFTPEFGHMTDAMQYSSGDHALVGNDKQIGISHIG 424

Query: 632 SSTISSSSFPIQLKSVLHSPHISHNLISIAKLCLENRAFVEFHPSFFLVKDLLSKSILLT 691
            + + SS  PI L  VLH+P IS  LIS+ +L  +N+AFVEF+P+FFLVKD  +K +LL 
Sbjct: 425 HALLHSSVKPIHLNHVLHTPEISKQLISVTRLGADNKAFVEFYPTFFLVKDQQTKQLLLQ 475

Query: 692 GQLEGGLYKLSVKRVKLTASRRCDRKRPDATVFPY-SERAYKRQRRDAVLTASR 730
           G LE GLYKL+ +   LT+S       P    FP    +A+  Q+   VL  +R
Sbjct: 485 GHLERGLYKLA-QPTTLTSS--SVSSSPSTQFFPAPPAQAFLSQQNQVVLWHNR 475

BLAST of Lag0039486 vs. NCBI nr
Match: CDH30699.1 (putative Ty1-copia-like retrotransposon [Cercis chinensis])

HSP 1 Score: 307.4 bits (786), Expect = 3.4e-79
Identity = 194/479 (40.50%), Postives = 271/479 (56.58%), Query Frame = 0

Query: 222 TSSNPFSTLTPPFG----IKLSDSNYLLWKNQLLNHIIAFDMESFINGTPAPP----KFL 281
           T +   ++  P FG    IKL  +N+L+W+NQLLN ++A   E  + GT + P       
Sbjct: 29  TQTTGINSNLPTFGQTLTIKLDRNNFLIWRNQLLNIVVANGYEDILEGTRSCPYQWIAVT 88

Query: 282 DTAQTQ-----VSPHYLIWQKFNRTLMGWIYSSLNEDKLGEIIGCNTAYEIWEHLRIVYE 341
           DTA T      ++P Y++WQ+ NR +M WIYSSL E  + +I+  N+A EIW  LR  Y 
Sbjct: 89  DTASTTHGSVILNPEYVLWQRQNRLVMSWIYSSLTEQMMTQIMAYNSACEIWTALRESYA 148

Query: 342 SLSTARIMGLRSQVQKIRKDGLTVSQYLAQIKDIADKFSAIGEPLSYCDHLGYILEGLGT 401
           S S ARIM LR Q+Q  RK GL+V  Y+ +I+ I D   AIGE +S  D +  +L GLG+
Sbjct: 149 SASRARIMELRLQLQTTRKGGLSVMDYMLRIQHICDHLRAIGESVSIDDQVMAVLAGLGS 208

Query: 402 DYNPFVTSIHNRTEKPSLADVLSLLLAYEARLEKQSTVDSLNLVQANLANLSVSNNVRRS 461
           +YNP V SI +R +  S+  + S L  YE RLE Q++V+    +QAN A  + SN  +R 
Sbjct: 209 EYNPIVASITSRLDSISVQALQSYLETYEKRLEIQNSVEQHIPLQANAAMYN-SNRGKRK 268

Query: 462 PRPPNPSKQSIPSKPPSTFSFPQSFQPNF-SGQSVLGRPQSSPRPPRWPSSNSSRPQCQI 521
           P   N      P      F+   S Q  F  G S  GR           ++  SRPQCQI
Sbjct: 269 PYQQNFHHSQTPVTATHNFNHRNSSQGGFRGGHSNKGR-----------ANPGSRPQCQI 328

Query: 522 CNKFGHTALACYNRHNPAYQAPPSGHSPQFYFNQFSQTSPLSQPLSSTSPDTNTNSQPPT 581
           C K GH A  C++R +  +Q P + HS     NQFS ++   Q L +          P  
Sbjct: 329 CCKIGHVATECWHRFDNQFQ-PKASHS-----NQFSSSAQDPQALMAA---------PGL 388

Query: 582 HPHEAWYMDFGATHHMTPDINNLQQSTPYYGSEQVVVGNGKSIPVLHVGSSTISSSSFPI 641
                W++D GATHH+T D+ NL    P+ G ++V+VGNGK + VLH G S+I +S   +
Sbjct: 389 LGETPWFLDTGATHHVTSDLANLSLHNPFSGDDKVIVGNGKGLYVLHTGHSSIPTSQGAL 448

Query: 642 QLKSVLHSPHISHNLISIAKLCLENRAFVEFHPSFFLVKDLLSKSILLTGQLEGGLYKL 687
            LK+VLH P I+ NL+S+ KLC +N A+VEF+PS+F VKD  +++ILL G L+ GLY +
Sbjct: 449 LLKNVLHVPKIAANLVSVQKLCHDNNAYVEFYPSYFAVKDQKTQAILLKGGLDKGLYSV 480

BLAST of Lag0039486 vs. NCBI nr
Match: RVW78327.1 (7-deoxyloganetin glucosyltransferase [Vitis vinifera])

HSP 1 Score: 303.5 bits (776), Expect = 4.8e-78
Identity = 182/483 (37.68%), Postives = 266/483 (55.07%), Query Frame = 0

Query: 216 LFSSPQTSSNPFSTLTPPFGIKLSDSNYLLWKNQLLNHIIAFDMESFING-TPAPPKFLD 275
           + SS  T +   S L  P  IKL   N++LW  Q+ N I A   E  I G  P PPK + 
Sbjct: 11  IVSSQVTPTLNMSMLNHPLPIKLDRDNHILWHTQMENVIYANGFEDHIEGLRPCPPKTIS 70

Query: 276 TAQTQVSPHYLIWQKFNRTLMGWIYSSLNEDKLGEIIGCNTAYEIWEHLRIVYESLSTAR 335
           T   +V+P +L+W++++R ++ WIYSSL  + +G+I+G  T++E W  L+  + + + AR
Sbjct: 71  TG--EVNPDFLVWRRYDRMILSWIYSSLTPEVMGQIVGLQTSHEAWTALQRSFSASTKAR 130

Query: 336 IMGLRSQVQKIRKDGLTVSQYLAQIKDIADKFSAIGEPLSYCDHLGYILEGLGTDYNPFV 395
            M LR   Q  +K  LT+ +Y+ ++K I+D  +AIGEP+   D +  +L GLG +YNP V
Sbjct: 131 TMQLRLAFQTTKKGSLTMMEYIQKLKHISDSLAAIGEPVPEKDQILQLLSGLGAEYNPIV 190

Query: 396 TSIHNRTEKPSLADVLSLLLAYEARLEKQSTVDSLNLVQANLANLSVSNNVRRSPRPPNP 455
            S+  R +   L  V S+LL +E RL  Q+T    +L+   +AN    N  RRS      
Sbjct: 191 ASLTARDDDIQLHAVHSILLTHEQRLHLQTTATEEDLL---IANFVTHNRPRRS------ 250

Query: 456 SKQSIPSKPPSTFSFPQSFQPNFSGQSVLGRPQSSP---RPPRWPSSNS---SRPQCQIC 515
                 S  PS    PQSF P     ++    Q  P   RP R+ ++ S   +RPQCQ+C
Sbjct: 251 -----QSNKPSQGKPPQSFMPTIRPDTLPDSRQQYPQGYRPNRFNNNRSRTNNRPQCQLC 310

Query: 516 NKFGHTALACYNRHNPAYQAPPSGHSPQFYFNQFSQTSPLSQPLSSTSPDTNTNSQPPTH 575
            KFGH  L+CY+R +  YQ P             + TS  SQ +  T P     + P + 
Sbjct: 311 GKFGHMVLSCYHRFDVNYQGPR------------APTSSTSQ-IGLTPPAQAMMAAPSSA 370

Query: 576 PHEAWYMDFGATHHMTPDINNLQQSTPYYGSEQVVVGNGKSIPVLHVGSSTISSSSFPIQ 635
             ++W++D GATHH++    N+   TPY G++ V+VGNGKS+P+  VG S + + + P  
Sbjct: 371 SMDSWFLDSGATHHLSHTAANIHNGTPYNGTDSVMVGNGKSLPITQVGHSFLHTPAKPFV 430

Query: 636 LKSVLHSPHISHNLISIAKLCLENRAFVEFHPSFFLVKDLLSKSILLTGQLEGGLYKLSV 692
           L +VLH P ++ NLIS++K C +N   +EFHPS F VKD  +K  LL GQLE GLYK   
Sbjct: 431 LHNVLHVPQLTSNLISVSKFCTDNNTILEFHPSSFFVKDKDTKVTLLQGQLERGLYKFPT 464

BLAST of Lag0039486 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 9.6e-45
Identity = 130/459 (28.32%), Postives = 223/459 (48.58%), Query Frame = 0

Query: 237 KLSDSNYLLWKNQLLNHIIAFDMESFING-TPAPPKFLDT-AQTQVSPHYLIWQKFNRTL 296
           KL+ +NYL+W  Q+      +++  F++G T  PP  + T A  +V+P Y  W++ ++ +
Sbjct: 25  KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLI 84

Query: 297 MGWIYSSLNEDKLGEIIGCNTAYEIWEHLRIVYESLSTARIMGLRSQVQKIRKDGLTVSQ 356
              +  +++      +    TA +IWE LR +Y + S   +  LR+Q+++  K   T+  
Sbjct: 85  YSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDD 144

Query: 357 YLAQIKDIADKFSAIGEPLSYCDHLGYILEGLGTDYNPFVTSIHNRTEKPSLADVLSLLL 416
           Y+  +    D+ + +G+P+ + + +  +LE L  +Y P +  I  +   P+L ++   LL
Sbjct: 145 YMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLL 204

Query: 417 AYEARLEKQSTVDSLNLV-----QANLANLSVSNNVRRSPRPPNPSKQSIPSKPPSTFSF 476
            +E+++   S+   + +        N    + +NN  R+ R  N +  +  SKP      
Sbjct: 205 NHESKILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNN-NSKP------ 264

Query: 477 PQSFQPNFSGQSVLGRPQSSPRPPRWPSSNSSRP---QCQICNKFGHTALACYNRHNPAY 536
            Q    NF                  P++N S+P   +CQIC   GH+A  C        
Sbjct: 265 WQQSSTNFH-----------------PNNNQSKPYLGKCQICGVQGHSAKRC-------- 324

Query: 537 QAPPSGHSPQFYFNQFSQTSPLSQPLSSTSPDTNTNSQPPTHPHEAWYMDFGATHHMTPD 596
                    Q + +  +   P S P +   P  N     P +    W +D GATHH+T D
Sbjct: 325 ------SQLQHFLSSVNSQQPPS-PFTPWQPRANLALGSP-YSSNNWLLDSGATHHITSD 384

Query: 597 INNLQQSTPYYGSEQVVVGNGKSIPVLHVGSSTISSSSFPIQLKSVLHSPHISHNLISIA 656
            NNL    PY G + V+V +G +IP+ H GS+++S+ S P+ L ++L+ P+I  NLIS+ 
Sbjct: 385 FNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVY 443

Query: 657 KLCLENRAFVEFHPSFFLVKDLLSKSILLTGQLEGGLYK 686
           +LC  N   VEF P+ F VKDL +   LL G+ +  LY+
Sbjct: 445 RLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYE 443

BLAST of Lag0039486 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 2.0e-42
Identity = 128/453 (28.26%), Postives = 223/453 (49.23%), Query Frame = 0

Query: 237 KLSDSNYLLWKNQLLNHIIAFDMESFING-TPAPPKFLDT-AQTQVSPHYLIWQKFNRTL 296
           KL+ +NYL+W  Q+      +++  F++G TP PP  + T A  +V+P Y  W++ ++ +
Sbjct: 25  KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDKLI 84

Query: 297 MGWIYSSLNEDKLGEIIGCNTAYEIWEHLRIVYESLSTARIMGLRSQVQKIRKDGLTVSQ 356
              I  +++      +    TA +IWE LR +Y + S   +  LR               
Sbjct: 85  YSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLR--------------- 144

Query: 357 YLAQIKDIADKFSAIGEPLSYCDHLGYILEGLGTDYNPFVTSIHNRTEKPSLADVLSLLL 416
           ++ +     D+ + +G+P+ + + +  +LE L  DY P +  I  +   PSL ++   L+
Sbjct: 145 FITRF----DQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLI 204

Query: 417 AYEARLEKQSTVDSLNLVQANLANLSVSNNVRRSPRPPNPSKQSIPSKPPSTFSFPQSFQ 476
             E++L   ++ + + +    + + + + N  ++ R  N +  +  ++         S+Q
Sbjct: 205 NRESKLLALNSAEVVPITANVVTHRNTNTNRNQNNRGDNRNYNNNNNR-------SNSWQ 264

Query: 477 PNFSGQSVLGRPQSSPRPPRWPSSNSSRPQCQICNKFGHTALACYNRHNPAYQAPPSGHS 536
           P+ SG       +S  R P+         +CQIC+  GH+A  C           P  H 
Sbjct: 265 PSSSGS------RSDNRQPK-----PYLGRCQICSVQGHSAKRC-----------PQLHQ 324

Query: 537 PQFYFNQFSQTSPLS--QPLSSTSPDTNTNSQPPTHPHEAWYMDFGATHHMTPDINNLQQ 596
            Q   NQ   TSP +  QP ++ + ++  N+         W +D GATHH+T D NNL  
Sbjct: 325 FQSTTNQQQSTSPFTPWQPRANLAVNSPYNA-------NNWLLDSGATHHITSDFNNLSF 384

Query: 597 STPYYGSEQVVVGNGKSIPVLHVGSSTISSSSFPIQLKSVLHSPHISHNLISIAKLCLEN 656
             PY G + V++ +G +IP+ H GS+++ +SS  + L  VL+ P+I  NLIS+ +LC  N
Sbjct: 385 HQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTN 422

Query: 657 RAFVEFHPSFFLVKDLLSKSILLTGQLEGGLYK 686
           R  VEF P+ F VKDL +   LL G+ +  LY+
Sbjct: 445 RVSVEFFPASFQVKDLNTGVPLLQGKTKDELYE 422

BLAST of Lag0039486 vs. ExPASy Swiss-Prot
Match: F4I3Z5 (Tetratricopeptide repeat protein SKI3 OS=Arabidopsis thaliana OX=3702 GN=SKI3 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.5e-26
Identity = 61/110 (55.45%), Postives = 75/110 (68.18%), Query Frame = 0

Query: 3    LPMFSLVDGLISFWSQDFMAAEKYFAQACSLGHDDVCLLLCHGVACMELAKQLCSSHFLM 62
            + ++SL  GL S   +DF +AE++ AQACSL + + CLLLCHG  CMELA+Q   S FL 
Sbjct: 995  MAVYSLARGLDSTGKKDFFSAEEFLAQACSLLNSESCLLLCHGAVCMELARQSNDSQFLS 1054

Query: 63   MAVNSLLKAQVISVVPIPTVSIILAQAEGSLGLKENWESYLRFEWFSWPP 113
            +AV SL K Q  S+ P+P V  +LAQA GSLG KE WE  LR EWF WPP
Sbjct: 1055 LAVKSLSKVQASSLFPLPIVYTLLAQAHGSLGSKEKWEKNLRLEWFCWPP 1104

BLAST of Lag0039486 vs. ExPASy TrEMBL
Match: A0A6J1DQX7 (uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022315 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.5e-101
Identity = 214/420 (50.95%), Postives = 277/420 (65.95%), Query Frame = 0

Query: 195 QFPPQSTSSLPFFPQYNPSVPLFSSPQTSSNPFSTLTPPFGIKLSDSNYLLWKNQLLNHI 254
           QFPP + + L   P  NP          S+NPF TL  P  +KL+D+N+LLWKNQLLN +
Sbjct: 2   QFPPPTPNFLAQPP--NP---------FSANPFPTLPQPLNVKLNDNNFLLWKNQLLNAV 61

Query: 255 IAFDMESFINGT-PAPPKFLDTAQTQVSPHYLIWQKFNRTLMGWIYSSLNEDKLGEIIGC 314
           IA  +  +++GT   PP+FLD  Q Q +P Y  W+++NR LM WIYSSL+E+K+GE++  
Sbjct: 62  IANGLRGYLDGTIMPPPQFLDHHQLQPNPAYYAWERYNRLLMCWIYSSLSEEKMGEVVSL 121

Query: 315 NTAYEIWEHLRIVYESLSTARIMGLRSQVQKIRKDGLTVSQYLAQIKDIADKFSAIGEPL 374
            T ++IW  L  VY+S +TARIMGL++++Q +RKDG +VSQYLA+IK+IADKF+A+GEPL
Sbjct: 122 ETTHDIWSSLTRVYDSKTTARIMGLKTELQNLRKDGSSVSQYLAKIKEIADKFAAVGEPL 181

Query: 375 SYCDHLGYILEGLGTDYNPFVTSIHNRTEKPSLADVLSLLLAYEARLEKQSTVDSLNLVQ 434
           SY DHL ++L+GLG++YN FVTSIHNR + PSL DV SLLLAYEARL+KQ+TVD LN+ Q
Sbjct: 182 SYRDHLAHVLDGLGSEYNAFVTSIHNRADSPSLEDVRSLLLAYEARLDKQNTVDQLNIAQ 241

Query: 435 ANLANLSVSNNVRRSPRP---PNPSKQSIPSKPPSTFSFPQSFQPNFSGQSVLGRPQSSP 494
           ANL NLS+ +N +R P     PN  K S P+ P S              QS+LG+PQS  
Sbjct: 242 ANLVNLSLQHNSKRPPPKFSFPNHYKHSFPNSPISA----------AQSQSILGKPQSVH 301

Query: 495 RPPRWPSSNSSRPQCQICNKFGHTALACYNRHNPAYQAPPSGHSPQFYFNQFSQTSPLSQ 554
           + P  P  +SS+ QCQIC K GH+A  CY+R N AY       SPQ  ++         Q
Sbjct: 302 KWP--PKPSSSKIQCQICGKLGHSAAVCYHRTNIAYH----NASPQALYHHV-------Q 361

Query: 555 PLSSTSPDTNTNSQPPTHPHEAWYMDFGATHHMTPDINNLQQSTPYYGSEQVVVGNGKSI 611
           P S T P +    Q   HP E+W+MD GATHHMTPD + L   TPY G EQV VGNG S+
Sbjct: 362 P-SPTHPSSGHEFQ---HPDESWFMDSGATHHMTPDSSILCNPTPYSGGEQVTVGNGSSV 383

BLAST of Lag0039486 vs. ExPASy TrEMBL
Match: A0A7J0GPN0 (UBX domain-containing protein OS=Actinidia rufa OX=165716 GN=Acr_23g0011260 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 8.9e-86
Identity = 196/516 (37.98%), Postives = 290/516 (56.20%), Query Frame = 0

Query: 172 SSTQPSIPQFYPPRYNPSVTAGFQFPPQSTSSLPFFPQYNPSVPLFSSPQTSSNPFSTLT 231
           SST P+ P   PP  NP  ++    P          PQ   + PL + P        ++ 
Sbjct: 9   SSTPPAPP---PPTSNPLPSSSIPKPN---------PQIINTSPLLNMP--------SIN 68

Query: 232 PPFGIKLSDSNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDTAQTQVSPHYLIWQKF 291
            P  +KL D NY++WK QLLN +IA  +E F++G+   PP+FLD  Q Q +P +  WQ++
Sbjct: 69  QPLAVKLDDHNYIIWKEQLLNIVIANGLEEFLDGSRVCPPRFLDPQQQQSNPEFHSWQRY 128

Query: 292 NRTLMGWIYSSLNEDKLGEIIGCNTAYEIWEHLRIVYESLSTARIMGLRSQVQKIRKDGL 351
           NR +M WIY+S+NE  LG+I+G  +A +IWE L  +Y + S A +  LR+ +Q I+K+GL
Sbjct: 129 NRLVMSWIYASINESMLGQIVGYTSASQIWEALERLYAAASFAHLTELRTALQTIKKEGL 188

Query: 352 TVSQYLAQIKDIADKFSAIGEPLSYCDHLGYILEGLGTDYNPFVTSIHNRTEKPSLADVL 411
           T   Y+ + + + +  ++IGEP++Y DHL Y L GLG DYNPFVTSI ++  +PS+ +  
Sbjct: 189 TALAYIQKFRHLCNSLASIGEPVTYTDHLIYFLGGLGRDYNPFVTSIQSQAIRPSVEEPT 248

Query: 412 SLLLAYEARLEKQSTVDSLNLVQANLANLSVSNNVRRSPRPPNPSKQSIPSKPPSTFSFP 471
           S                                ++ R P+  NPS  S P+   +++S P
Sbjct: 249 S------------------------------PTSLTRKPKFKNPSTNSFPNS--NSYSHP 308

Query: 472 QSFQPNFSGQSVLGRPQSSPRPPRWPSSNSSRPQCQICNKFGHTALACYNRHNPAYQAPP 531
           +    N         P  SP     PSS   RP+CQIC K GHTA  CY+  N  YQ PP
Sbjct: 309 RGQNRN---------PSYSPN----PSSPKPRPRCQICLKPGHTANKCYHHTNLNYQPPP 368

Query: 532 SGHSPQFYFNQFSQTSPLSQPLSSTSPDTNTNSQPPTHPHEAWYMDFGATHHMTPDINNL 591
               P   FN +   +P S   SS  P     S P +    +WYMD GA+HH TPD+N L
Sbjct: 369 ---PPPRNFNAYITPNP-SLSTSSNQPAMLLLSLPDS----SWYMDSGASHHFTPDLNML 428

Query: 592 QQSTPYYGSEQVVVGNGKSIPVLHVGSSTISSSSFPIQLKSVLHSPHISHNLISIAKLCL 651
             ++PY G +QV VGNGK+ P+ ++G +++ + +  ++L  V HSP ++ NL+S+++LC 
Sbjct: 429 DSASPYTGMDQVTVGNGKTSPISNIGHASLPAYNSILKLHHVYHSPSLNKNLLSVSRLCT 451

Query: 652 ENRAFVEFHPSFFLVKDLLSKSILLTGQLEGGLYKL 687
           +N AF+EF+P+FFLVK  ++K +LL GQL+ GLY++
Sbjct: 489 DNHAFIEFYPTFFLVKHQVTKQLLLRGQLDKGLYRV 451

BLAST of Lag0039486 vs. ExPASy TrEMBL
Match: A0A438GC62 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_210 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.7e-84
Identity = 208/534 (38.95%), Postives = 291/534 (54.49%), Query Frame = 0

Query: 212 PSVPLFSSPQTSSN-------------PFSTLTPPFGIKLSDSNYLLWKNQLLNHIIAFD 271
           P  P  +S  T++N             P  +L+    IKL ++N LL K+QLLN IIA  
Sbjct: 5   PPTPASNSNTTTNNNQNPAPQITQMTLPSPSLSQSLSIKLDETNLLLRKSQLLNVIIANG 64

Query: 272 MESFIN-GTPAPPKFLDTAQTQVSPHYLIWQKFNRTLMGWIYSSLNEDKLGEIIGCNTAY 331
           +E FI+    +PPK+LD A  QV+P ++ W + N+ +M WIYSSL    +G+I+  +TA 
Sbjct: 65  LEDFIDPDQSSPPKYLDAACRQVNPEFVQWDRLNQLVMSWIYSSLTPGMVGQIVEYSTAR 124

Query: 332 EIWEHLRIVYESLSTARIMGLRSQVQKIRKDGLTVSQYLAQIKDIADKFSAIGEPLSYCD 391
           +IW  L   YES S A +M L SQ+Q+I+K  + +S+YL+++K + D+F+ IGEPLSY D
Sbjct: 125 DIWASLNDEYESPSIATVMSLNSQLQRIKKIDIPLSEYLSRLKFVFDEFATIGEPLSYRD 184

Query: 392 HLGYILEGLGTDYNPFVTSIHNRTEKPSLADVLSLLLAYEARLEKQSTVDSLNLVQANLA 451
            L  ILEGL  +Y+ FVTSIHNR+++PSL +V SLL  YE RL ++S   +LN  QAN  
Sbjct: 185 KLTRILEGLPEEYDNFVTSIHNRSDRPSLQEVHSLLHTYEYRLSQRSMDQNLNFPQAN-- 244

Query: 452 NLSVSNNVRRSPRPPNPSKQSIPSKPPSTFSFPQSFQPNFSGQSVLGRPQSSPRPPRWPS 511
                                                                  PR P 
Sbjct: 245 -------------------------------------------------------PRQPG 304

Query: 512 SNSSRPQCQICNKFGHTALACYNRHNPAYQAPPSGHSPQFYFNQFSQT-SPLSQPLSSTS 571
            N+S PQCQIC K GH AL  Y+R N  Y  P   ++  F  N   QT SP+S  L++++
Sbjct: 305 YNNSIPQCQICGKSGHIALNGYHRTNLTYHPPVFPNAAAFNPNGPGQTSSPISAMLTTSA 364

Query: 572 PDTNTNSQPPTHPHEAWYMDFGATHHMTPDINNLQQSTPYYGSEQVVVGNGKSIPVLHVG 631
             T  +SQ   +   +WYMD GATHH TP+  ++  +  Y   +  +VGN K I + H+G
Sbjct: 365 APTGLSSQSSDN---SWYMDSGATHHFTPEFGHMTDAMQYSSGDHALVGNDKQIGISHIG 424

Query: 632 SSTISSSSFPIQLKSVLHSPHISHNLISIAKLCLENRAFVEFHPSFFLVKDLLSKSILLT 691
            + + SS  PI L  VLH+P IS  LIS+ +L  +N+AFVEF+P+FFLVKD  +K +LL 
Sbjct: 425 HALLHSSVKPIHLNHVLHTPEISKQLISVTRLGADNKAFVEFYPTFFLVKDQQTKQLLLQ 475

Query: 692 GQLEGGLYKLSVKRVKLTASRRCDRKRPDATVFPY-SERAYKRQRRDAVLTASR 730
           G LE GLYKL+ +   LT+S       P    FP    +A+  Q+   VL  +R
Sbjct: 485 GHLERGLYKLA-QPTTLTSS--SVSSSPSTQFFPAPPAQAFLSQQNQVVLWHNR 475

BLAST of Lag0039486 vs. ExPASy TrEMBL
Match: U6EFK2 (Putative Ty1-copia-like retrotransposon OS=Cercis chinensis OX=161750 GN=Ty1-copia PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.6e-79
Identity = 194/479 (40.50%), Postives = 271/479 (56.58%), Query Frame = 0

Query: 222 TSSNPFSTLTPPFG----IKLSDSNYLLWKNQLLNHIIAFDMESFINGTPAPP----KFL 281
           T +   ++  P FG    IKL  +N+L+W+NQLLN ++A   E  + GT + P       
Sbjct: 29  TQTTGINSNLPTFGQTLTIKLDRNNFLIWRNQLLNIVVANGYEDILEGTRSCPYQWIAVT 88

Query: 282 DTAQTQ-----VSPHYLIWQKFNRTLMGWIYSSLNEDKLGEIIGCNTAYEIWEHLRIVYE 341
           DTA T      ++P Y++WQ+ NR +M WIYSSL E  + +I+  N+A EIW  LR  Y 
Sbjct: 89  DTASTTHGSVILNPEYVLWQRQNRLVMSWIYSSLTEQMMTQIMAYNSACEIWTALRESYA 148

Query: 342 SLSTARIMGLRSQVQKIRKDGLTVSQYLAQIKDIADKFSAIGEPLSYCDHLGYILEGLGT 401
           S S ARIM LR Q+Q  RK GL+V  Y+ +I+ I D   AIGE +S  D +  +L GLG+
Sbjct: 149 SASRARIMELRLQLQTTRKGGLSVMDYMLRIQHICDHLRAIGESVSIDDQVMAVLAGLGS 208

Query: 402 DYNPFVTSIHNRTEKPSLADVLSLLLAYEARLEKQSTVDSLNLVQANLANLSVSNNVRRS 461
           +YNP V SI +R +  S+  + S L  YE RLE Q++V+    +QAN A  + SN  +R 
Sbjct: 209 EYNPIVASITSRLDSISVQALQSYLETYEKRLEIQNSVEQHIPLQANAAMYN-SNRGKRK 268

Query: 462 PRPPNPSKQSIPSKPPSTFSFPQSFQPNF-SGQSVLGRPQSSPRPPRWPSSNSSRPQCQI 521
           P   N      P      F+   S Q  F  G S  GR           ++  SRPQCQI
Sbjct: 269 PYQQNFHHSQTPVTATHNFNHRNSSQGGFRGGHSNKGR-----------ANPGSRPQCQI 328

Query: 522 CNKFGHTALACYNRHNPAYQAPPSGHSPQFYFNQFSQTSPLSQPLSSTSPDTNTNSQPPT 581
           C K GH A  C++R +  +Q P + HS     NQFS ++   Q L +          P  
Sbjct: 329 CCKIGHVATECWHRFDNQFQ-PKASHS-----NQFSSSAQDPQALMAA---------PGL 388

Query: 582 HPHEAWYMDFGATHHMTPDINNLQQSTPYYGSEQVVVGNGKSIPVLHVGSSTISSSSFPI 641
                W++D GATHH+T D+ NL    P+ G ++V+VGNGK + VLH G S+I +S   +
Sbjct: 389 LGETPWFLDTGATHHVTSDLANLSLHNPFSGDDKVIVGNGKGLYVLHTGHSSIPTSQGAL 448

Query: 642 QLKSVLHSPHISHNLISIAKLCLENRAFVEFHPSFFLVKDLLSKSILLTGQLEGGLYKL 687
            LK+VLH P I+ NL+S+ KLC +N A+VEF+PS+F VKD  +++ILL G L+ GLY +
Sbjct: 449 LLKNVLHVPKIAANLVSVQKLCHDNNAYVEFYPSYFAVKDQKTQAILLKGGLDKGLYSV 480

BLAST of Lag0039486 vs. ExPASy TrEMBL
Match: A0A438H229 (7-deoxyloganetin glucosyltransferase OS=Vitis vinifera OX=29760 GN=UGT85A24_11 PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 2.3e-78
Identity = 182/483 (37.68%), Postives = 266/483 (55.07%), Query Frame = 0

Query: 216 LFSSPQTSSNPFSTLTPPFGIKLSDSNYLLWKNQLLNHIIAFDMESFING-TPAPPKFLD 275
           + SS  T +   S L  P  IKL   N++LW  Q+ N I A   E  I G  P PPK + 
Sbjct: 11  IVSSQVTPTLNMSMLNHPLPIKLDRDNHILWHTQMENVIYANGFEDHIEGLRPCPPKTIS 70

Query: 276 TAQTQVSPHYLIWQKFNRTLMGWIYSSLNEDKLGEIIGCNTAYEIWEHLRIVYESLSTAR 335
           T   +V+P +L+W++++R ++ WIYSSL  + +G+I+G  T++E W  L+  + + + AR
Sbjct: 71  TG--EVNPDFLVWRRYDRMILSWIYSSLTPEVMGQIVGLQTSHEAWTALQRSFSASTKAR 130

Query: 336 IMGLRSQVQKIRKDGLTVSQYLAQIKDIADKFSAIGEPLSYCDHLGYILEGLGTDYNPFV 395
            M LR   Q  +K  LT+ +Y+ ++K I+D  +AIGEP+   D +  +L GLG +YNP V
Sbjct: 131 TMQLRLAFQTTKKGSLTMMEYIQKLKHISDSLAAIGEPVPEKDQILQLLSGLGAEYNPIV 190

Query: 396 TSIHNRTEKPSLADVLSLLLAYEARLEKQSTVDSLNLVQANLANLSVSNNVRRSPRPPNP 455
            S+  R +   L  V S+LL +E RL  Q+T    +L+   +AN    N  RRS      
Sbjct: 191 ASLTARDDDIQLHAVHSILLTHEQRLHLQTTATEEDLL---IANFVTHNRPRRS------ 250

Query: 456 SKQSIPSKPPSTFSFPQSFQPNFSGQSVLGRPQSSP---RPPRWPSSNS---SRPQCQIC 515
                 S  PS    PQSF P     ++    Q  P   RP R+ ++ S   +RPQCQ+C
Sbjct: 251 -----QSNKPSQGKPPQSFMPTIRPDTLPDSRQQYPQGYRPNRFNNNRSRTNNRPQCQLC 310

Query: 516 NKFGHTALACYNRHNPAYQAPPSGHSPQFYFNQFSQTSPLSQPLSSTSPDTNTNSQPPTH 575
            KFGH  L+CY+R +  YQ P             + TS  SQ +  T P     + P + 
Sbjct: 311 GKFGHMVLSCYHRFDVNYQGPR------------APTSSTSQ-IGLTPPAQAMMAAPSSA 370

Query: 576 PHEAWYMDFGATHHMTPDINNLQQSTPYYGSEQVVVGNGKSIPVLHVGSSTISSSSFPIQ 635
             ++W++D GATHH++    N+   TPY G++ V+VGNGKS+P+  VG S + + + P  
Sbjct: 371 SMDSWFLDSGATHHLSHTAANIHNGTPYNGTDSVMVGNGKSLPITQVGHSFLHTPAKPFV 430

Query: 636 LKSVLHSPHISHNLISIAKLCLENRAFVEFHPSFFLVKDLLSKSILLTGQLEGGLYKLSV 692
           L +VLH P ++ NLIS++K C +N   +EFHPS F VKD  +K  LL GQLE GLYK   
Sbjct: 431 LHNVLHVPQLTSNLISVSKFCTDNNTILEFHPSSFFVKDKDTKVTLLQGQLERGLYKFPT 464

BLAST of Lag0039486 vs. TAIR 10
Match: AT1G76630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 1.1e-27
Identity = 61/110 (55.45%), Postives = 75/110 (68.18%), Query Frame = 0

Query: 3    LPMFSLVDGLISFWSQDFMAAEKYFAQACSLGHDDVCLLLCHGVACMELAKQLCSSHFLM 62
            + ++SL  GL S   +DF +AE++ AQACSL + + CLLLCHG  CMELA+Q   S FL 
Sbjct: 967  MAVYSLARGLDSTGKKDFFSAEEFLAQACSLLNSESCLLLCHGAVCMELARQSNDSQFLS 1026

Query: 63   MAVNSLLKAQVISVVPIPTVSIILAQAEGSLGLKENWESYLRFEWFSWPP 113
            +AV SL K Q  S+ P+P V  +LAQA GSLG KE WE  LR EWF WPP
Sbjct: 1027 LAVKSLSKVQASSLFPLPIVYTLLAQAHGSLGSKEKWEKNLRLEWFCWPP 1076

BLAST of Lag0039486 vs. TAIR 10
Match: AT1G76630.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 1.1e-27
Identity = 61/110 (55.45%), Postives = 75/110 (68.18%), Query Frame = 0

Query: 3    LPMFSLVDGLISFWSQDFMAAEKYFAQACSLGHDDVCLLLCHGVACMELAKQLCSSHFLM 62
            + ++SL  GL S   +DF +AE++ AQACSL + + CLLLCHG  CMELA+Q   S FL 
Sbjct: 995  MAVYSLARGLDSTGKKDFFSAEEFLAQACSLLNSESCLLLCHGAVCMELARQSNDSQFLS 1054

Query: 63   MAVNSLLKAQVISVVPIPTVSIILAQAEGSLGLKENWESYLRFEWFSWPP 113
            +AV SL K Q  S+ P+P V  +LAQA GSLG KE WE  LR EWF WPP
Sbjct: 1055 LAVKSLSKVQASSLFPLPIVYTLLAQAHGSLGSKEKWEKNLRLEWFCWPP 1104

BLAST of Lag0039486 vs. TAIR 10
Match: AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 76.3 bits (186), Expect = 1.2e-13
Identity = 46/191 (24.08%), Postives = 91/191 (47.64%), Query Frame = 0

Query: 233 PFGIKLSDSNYLLWKNQLLNHIIAFDMESFINGTPAPPKFLDTAQTQVSPHYLIWQKFNR 292
           P  + + +SNY  W+   L H ++FD+   I+GT  P    D          + WQK + 
Sbjct: 21  PVMLDIEESNYDAWRELFLTHCLSFDVMGHIDGTLLPTNAND----------VNWQKRDG 80

Query: 293 TLMGWIYSSLNEDKL-GEIIGCNTAYEIWEHLRIVYESLSTARIMGLRSQVQKIRKDGLT 352
            +   +Y +L   +  G  +  +T+ +IW  ++  + +   AR + L S+++      + 
Sbjct: 81  IVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALRLDSELRTKDIGDMR 140

Query: 353 VSQYLAQIKDIADKFSAIGEPLSYCDHLGYILEGLGTDYNPFVTSIHNRTEKPSLADVLS 412
           V+ Y  ++K +AD    +  P++  + + Y+L GL   ++  +  I +R   PS  D  +
Sbjct: 141 VADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIKHRQPFPSFDDAAT 200

Query: 413 LLLAYEARLEK 423
           +L   E RL++
Sbjct: 201 MLQEEEDRLKR 201

BLAST of Lag0039486 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 4.6e-10
Identity = 34/124 (27.42%), Postives = 63/124 (50.81%), Query Frame = 0

Query: 240 DSNYLLWKNQLLNHIIAFDMESFINGT-PAPPKFLDTAQTQVSPHYLIWQKFNRTLMGWI 299
           + NY+ WK +  + +       FI+GT P P  F        SP Y  W++ N  +M W+
Sbjct: 39  EDNYVAWKIRFRSFLRVTKKFGFIDGTLPKPDPF--------SPLYQPWEQCNAMVMYWL 98

Query: 300 YSSLNEDKLGEIIGCNTAYEIWEHLRIVYESLSTARIMGLRSQVQKIRKDGLTVSQYLAQ 359
            +S+ +  L  ++   TA+++WE LR V+      +I  LR ++  +R+ G +V +Y  +
Sbjct: 99  MNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDLKIYQLRRRLATLRQGGDSVEEYFGK 154

Query: 360 IKDI 363
           +  +
Sbjct: 159 LSKV 154

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022155181.13.1e-10150.95uncharacterized protein LOC111022315 [Momordica charantia][more]
GFZ12741.11.8e-8537.98UBX domain-containing protein [Actinidia rufa][more]
RVW69807.17.7e-8438.95Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera][more]
CDH30699.13.4e-7940.50putative Ty1-copia-like retrotransposon [Cercis chinensis][more]
RVW78327.14.8e-7837.687-deoxyloganetin glucosyltransferase [Vitis vinifera][more]
Match NameE-valueIdentityDescription
Q94HW29.6e-4528.32Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT942.0e-4228.26Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
F4I3Z51.5e-2655.45Tetratricopeptide repeat protein SKI3 OS=Arabidopsis thaliana OX=3702 GN=SKI3 PE... [more]
Match NameE-valueIdentityDescription
A0A6J1DQX71.5e-10150.95uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A7J0GPN08.9e-8637.98UBX domain-containing protein OS=Actinidia rufa OX=165716 GN=Acr_23g0011260 PE=4... [more]
A0A438GC623.7e-8438.95Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... [more]
U6EFK21.6e-7940.50Putative Ty1-copia-like retrotransposon OS=Cercis chinensis OX=161750 GN=Ty1-cop... [more]
A0A438H2292.3e-7837.687-deoxyloganetin glucosyltransferase OS=Vitis vinifera OX=29760 GN=UGT85A24_11 P... [more]
Match NameE-valueIdentityDescription
AT1G76630.11.1e-2755.45Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G76630.21.1e-2755.45Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G34070.11.2e-1324.08CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... [more]
AT1G21280.14.6e-1027.42CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 287..422
e-value: 3.6E-21
score: 75.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 460..487
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 442..503
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 545..568
NoneNo IPR availablePANTHERPTHR47481FAMILY NOT NAMEDcoord: 236..643

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0039486.1Lag0039486.1mRNA