
Lag0039452 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGAAACATTGGGAATTGAAAAGGTGTTGACGTTGACTGTTGATAATGTTTCATCCAATGATACTGCTATTGCTTATCTAGTTAAGCGTTTTAAACATGGATTGGTGTTGGATGGTGAGTTTTTGCATGTTAGATGTTGTGCACATATTCTTAATTTGATTGTTAATGATGGCTTGAAAGATGTGCATGAATCAGTGTCTCGAATTCGAAATGTTGTTAGATTTGTTAGATCTTCTCCAGCTCGATTTGCAAAATTTAAGAAATGTATTGAAGAAGAGAATATATCTAGCAATAGTCTTCTATGTCTTGATGTTCCAACAAGGTGGAACTCCACATATTTGATGCTTGAGGCTGCTAAAAATTTGAGAAGGCATTTGATAGATTAG ATGTTTGAAACATTGGGAATTGAAAAGGTGTTGACGTTGACTGTTGATAATGTTTCATCCAATGATACTGCTATTGCTTATCTAGTTAAGCGTTTTAAACATGGATTGGTGTTGGATGGTGAGTTTTTGCATGTTAGATGTTGTGCACATATTCTTAATTTGATTGTTAATGATGGCTTGAAAGATGTGCATGAATCAGTGTCTCGAATTCGAAATGTTGTTAGATTTGTTAGATCTTCTCCAGCTCGATTTGCAAAATTTAAGAAATGTATTGAAGAAGAGAATATATCTAGCAATAGTCTTCTATGTCTTGATGTTCCAACAAGGTGGAACTCCACATATTTGATGCTTGAGGCTGCTAAAAATTTGAGAAGGCATTTGATAGATTAG ATGTTTGAAACATTGGGAATTGAAAAGGTGTTGACGTTGACTGTTGATAATGTTTCATCCAATGATACTGCTATTGCTTATCTAGTTAAGCGTTTTAAACATGGATTGGTGTTGGATGGTGAGTTTTTGCATGTTAGATGTTGTGCACATATTCTTAATTTGATTGTTAATGATGGCTTGAAAGATGTGCATGAATCAGTGTCTCGAATTCGAAATGTTGTTAGATTTGTTAGATCTTCTCCAGCTCGATTTGCAAAATTTAAGAAATGTATTGAAGAAGAGAATATATCTAGCAATAGTCTTCTATGTCTTGATGTTCCAACAAGGTGGAACTCCACATATTTGATGCTTGAGGCTGCTAAAAATTTGAGAAGGCATTTGATAGATTAG MFETLGIEKVLTLTVDNVSSNDTAIAYLVKRFKHGLVLDGEFLHVRCCAHILNLIVNDGLKDVHESVSRIRNVVRFVRSSPARFAKFKKCIEEENISSNSLLCLDVPTRWNSTYLMLEAAKNLRRHLID Homology
BLAST of Lag0039452 vs. NCBI nr
Match: XP_038889294.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida]) HSP 1 Score: 193.7 bits (491), Expect = 9.6e-46 Identity = 93/115 (80.87%), Postives = 104/115 (90.43%), Query Frame = 0
BLAST of Lag0039452 vs. NCBI nr
Match: XP_038890289.1 (zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida]) HSP 1 Score: 190.3 bits (482), Expect = 1.1e-44 Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = 0
BLAST of Lag0039452 vs. NCBI nr
Match: XP_038896277.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida]) HSP 1 Score: 186.4 bits (472), Expect = 1.5e-43 Identity = 90/109 (82.57%), Postives = 98/109 (89.91%), Query Frame = 0
BLAST of Lag0039452 vs. NCBI nr
Match: XP_038895827.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida]) HSP 1 Score: 186.0 bits (471), Expect = 2.0e-43 Identity = 90/115 (78.26%), Postives = 98/115 (85.22%), Query Frame = 0
BLAST of Lag0039452 vs. NCBI nr
Match: XP_038878070.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Benincasa hispida]) HSP 1 Score: 185.7 bits (470), Expect = 2.6e-43 Identity = 89/120 (74.17%), Postives = 105/120 (87.50%), Query Frame = 0
BLAST of Lag0039452 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2) HSP 1 Score: 96.3 bits (238), Expect = 2.7e-19 Identity = 48/124 (38.71%), Postives = 75/124 (60.48%), Query Frame = 0
BLAST of Lag0039452 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 2.7e-19 Identity = 48/124 (38.71%), Postives = 75/124 (60.48%), Query Frame = 0
BLAST of Lag0039452 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.5e-17 Identity = 49/121 (40.50%), Postives = 74/121 (61.16%), Query Frame = 0
BLAST of Lag0039452 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.3e-16 Identity = 48/121 (39.67%), Postives = 73/121 (60.33%), Query Frame = 0
BLAST of Lag0039452 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.8e-15 Identity = 45/117 (38.46%), Postives = 68/117 (58.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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