Lag0039395 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGTTGCCGAGGCAGTTGAAGAAGGCAATCCGAAGGAACCTAAACGACAAAACCCAGAGCAGACTGAGCCAAGAGTTGTGGATACAGAGAGGTTTGAGAAGAATACGGAGGAAGTACAGAAGAAATACAGAGGAAGTTCAAGAAAAGCAGACTGAGGATGTGCAAGAAGAACAGGCAGAGGTTGCACCTGAAAAGGTAATGAGCAAGACAGAGGCTCGAGTGGAGATGATCATGCCGAAGTCCCAAACATCACCGCATGAAGCGAAAAGCTGGACGCGTCAAGGTAGTCCGACTGATACTCCCTCGCCTCCAACCACTGATTCTGAAAGAGAAAATGCAGAGAGAGAGAGCAGGAGAAAAAGAGGTAGGATAAAGCAAGAGAGGAAGCAGAGAAAAAGGTGAAGAAGAAAGGTTGCTTAAGCAAATGGCAGAAAGGGCAAGAGTGTTGTGCAGCATCGGAGGAACCTGACAGATAGAAGAGCCAAGTTTCATATGTCGCTTCGTCAACCGTCTTGCCAGAGCAAAATATGCTAGCTCTGAAGAGAGACTTCCTGTTTGAGAGAGGATTTAGTGGTAGTCTTCCACATTTTCTGAGGGCTGGCATTACAACACGATTGGGATTATTCTGTTCTAAGCCTGAATCTGTGAACGTGCAGGTAGTGCGCAATTTTATGCAAATATTGACGAGGAAGAAGGTTTCCAAGTGATCGTTCGAGGCGTAGAAGTCGACTGGAGTCCTGGTGCTATTAACGCACTGTATAACCTTCAAGATTTCCCCCACCAGGATACAATGAGATGGTTGTGGCACCATCTAATGGCAATTGAGCGATGCTGTGAGGAAGTTGGTGTTGAAGGGGCGCAGTGGAAACTTTCAAAACTGAGAAAAGGCATTTCAGTCAGCCTATCTAAAGAAGGAAGCAAATACATGGATGGGATTATCAAACAGAGGTTGCTTCCAACGACTCTGACTCTATGGTTTCTAGGGAACGTGTTCTGCTGGCGTTTGCGATTTTAAGGTCTCCAGTATTGATGTAGGGAAGATTATTGCTAGTGAAATATCTGGATGTTGGAAGAAGAAAGTGGGGAAGTTGTTTTTCCCAAATACTATTACAATGCTTTGCAAGAGAGTAGGGGTTCCGAGAATGAAGGAGATGTCATATTATTTGACAAGGGAATCATTGATACGCCAACTTGGCACGGCTTCAGCGTACGCAAGAGGCACGTCAGGGTGGGCTTGTTTATGGCATTCAAAGATTATAGAACAACTTGCACTATCGGCCACAGGCAAGAGTTTGTGA ATGTTGTTGCCGAGGCAGTTGAAGAAGGCAATCCGAAGGAACCTAAACGACAAAACCCAGAGCAGACTGAGCCAAGAGTTGTGGATACAGAGAGGTTTGAGAAGAATACGGAGGAAGTACAGAAGAAATACAGAGGAAGTTCAAGAAAAGCAGACTGAGGATGTGCAAGAAGAACAGGCAGAGGTTGCACCTGAAAAGGTAATGAGCAAGACAGAGGCTCGAGTGGAGATGATCATGCCGAAGTCCCAAACATCACCGCATGAAGCGAAAAGCTGGACGCGTCAAGGTAGTCCGACTGATACTCCCTCGCCTCCAACCACTGATTCTGAAAGAGAAAATGCAGAGAGAGAGAGCAGGAGAAAAAGAGGTAGTGCGCAATTTTATGCAAATATTGACGAGGAAGAAGGTTTCCAAGTGATCGTTCGAGGCGTAGAAGTCGACTGGAGTCCTGGTGCTATTAACGCACTGTATAACCTTCAAGATTTCCCCCACCAGGATACAATGAGATGGTTGTGGCACCATCTAATGGCAATTGAGCGATGCTGTGAGGAAGTTGGTGTTGAAGGGGCGCAGTGGAAACTTTCAAAACTGAGAAAAGGCATTTCAGGAACGTGTTCTGCTGGCGTTTGCGATTTTAAGGTCTCCAGTATTGATGTAGGGAAGATTATTGCTAGTGAAATATCTGGATGTTGGAAGAAGAAAGTGGGGAAGTTGTTTTTCCCAAATACTATTACAATGCTTTGCAAGAGAGTAGGGGTTCCGAGAATGAAGGAGATGTCATATTATTTGACAAGGGAATCATTGATACGCCAACTTGGCACGGCTTCAGCGTACGCAAGAGGCACGTCAGGGTGGGCTTGTTTATGGCATTCAAAGATTATAGAACAACTTGCACTATCGGCCACAGGCAAGAGTTTGTGA ATGTTGTTGCCGAGGCAGTTGAAGAAGGCAATCCGAAGGAACCTAAACGACAAAACCCAGAGCAGACTGAGCCAAGAGTTGTGGATACAGAGAGGTTTGAGAAGAATACGGAGGAAGTACAGAAGAAATACAGAGGAAGTTCAAGAAAAGCAGACTGAGGATGTGCAAGAAGAACAGGCAGAGGTTGCACCTGAAAAGGTAATGAGCAAGACAGAGGCTCGAGTGGAGATGATCATGCCGAAGTCCCAAACATCACCGCATGAAGCGAAAAGCTGGACGCGTCAAGGTAGTCCGACTGATACTCCCTCGCCTCCAACCACTGATTCTGAAAGAGAAAATGCAGAGAGAGAGAGCAGGAGAAAAAGAGGTAGTGCGCAATTTTATGCAAATATTGACGAGGAAGAAGGTTTCCAAGTGATCGTTCGAGGCGTAGAAGTCGACTGGAGTCCTGGTGCTATTAACGCACTGTATAACCTTCAAGATTTCCCCCACCAGGATACAATGAGATGGTTGTGGCACCATCTAATGGCAATTGAGCGATGCTGTGAGGAAGTTGGTGTTGAAGGGGCGCAGTGGAAACTTTCAAAACTGAGAAAAGGCATTTCAGGAACGTGTTCTGCTGGCGTTTGCGATTTTAAGGTCTCCAGTATTGATGTAGGGAAGATTATTGCTAGTGAAATATCTGGATGTTGGAAGAAGAAAGTGGGGAAGTTGTTTTTCCCAAATACTATTACAATGCTTTGCAAGAGAGTAGGGGTTCCGAGAATGAAGGAGATGTCATATTATTTGACAAGGGAATCATTGATACGCCAACTTGGCACGGCTTCAGCGTACGCAAGAGGCACGTCAGGGTGGGCTTGTTTATGGCATTCAAAGATTATAGAACAACTTGCACTATCGGCCACAGGCAAGAGTTTGTGA MLLPRQLKKAIRRNLNDKTQSRLSQELWIQRGLRRIRRKYRRNTEEVQEKQTEDVQEEQAEVAPEKVMSKTEARVEMIMPKSQTSPHEAKSWTRQGSPTDTPSPPTTDSERENAERESRRKRGSAQFYANIDEEEGFQVIVRGVEVDWSPGAINALYNLQDFPHQDTMRWLWHHLMAIERCCEEVGVEGAQWKLSKLRKGISGTCSAGVCDFKVSSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRVGVPRMKEMSYYLTRESLIRQLGTASAYARGTSGWACLWHSKIIEQLALSATGKSL Homology
BLAST of Lag0039395 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii]) HSP 1 Score: 63.5 bits (153), Expect = 3.5e-06 Identity = 47/159 (29.56%), Postives = 71/159 (44.65%), Query Frame = 0
BLAST of Lag0039395 vs. NCBI nr
Match: PON50458.1 (hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]) HSP 1 Score: 59.3 bits (142), Expect = 6.7e-05 Identity = 49/187 (26.20%), Postives = 73/187 (39.04%), Query Frame = 0
BLAST of Lag0039395 vs. NCBI nr
Match: TYH88163.1 (hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]) HSP 1 Score: 58.2 bits (139), Expect = 1.5e-04 Identity = 49/168 (29.17%), Postives = 75/168 (44.64%), Query Frame = 0
BLAST of Lag0039395 vs. NCBI nr
Match: PON70375.1 (hypothetical protein PanWU01x14_080440 [Parasponia andersonii]) HSP 1 Score: 57.4 bits (137), Expect = 2.5e-04 Identity = 50/181 (27.62%), Postives = 75/181 (41.44%), Query Frame = 0
BLAST of Lag0039395 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]) HSP 1 Score: 57.4 bits (137), Expect = 2.5e-04 Identity = 69/285 (24.21%), Postives = 105/285 (36.84%), Query Frame = 0
BLAST of Lag0039395 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.7e-06 Identity = 47/159 (29.56%), Postives = 71/159 (44.65%), Query Frame = 0
BLAST of Lag0039395 vs. ExPASy TrEMBL
Match: A0A2P5BNT0 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_223230 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 3.2e-05 Identity = 49/187 (26.20%), Postives = 73/187 (39.04%), Query Frame = 0
BLAST of Lag0039395 vs. ExPASy TrEMBL
Match: A0A5D2MA47 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D01G168900v1 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 7.2e-05 Identity = 49/168 (29.17%), Postives = 75/168 (44.64%), Query Frame = 0
BLAST of Lag0039395 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.2e-04 Identity = 69/285 (24.21%), Postives = 105/285 (36.84%), Query Frame = 0
BLAST of Lag0039395 vs. ExPASy TrEMBL
Match: A0A2P5DAQ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.2e-04 Identity = 50/181 (27.62%), Postives = 75/181 (41.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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