Lag0039391 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0039391
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionTy3-gypsy retrotransposon protein
Locationchr2: 42851265 .. 42854659 (+)
RNA-Seq ExpressionLag0039391
SyntenyLag0039391
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGAACAACTACTAGAAGCGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAAAAGAGAGGGAGAAAGTCGATGATCCCAAGCATTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAAGATGTTTCGTCTTAAAGGACTTAATTCTAAAGCTAGTTGTGGAAGGAAAAATTGAGCTCGACCTTTATGAAGTAGCTCAATCAAATCTTGCTACAATCAAAGAAAAGAGCAAGCATCAAAGAAAGAATGATCCTAAGAAACCTCAACCCAAGAGGAAGAGAAGTAAAAAGTGTTCTCAACCTCGACAACCGGTGACTGTGAAAGAGATCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGAGAACTTTGCAACTTCCTACTACATCGACGTAGAAGAAGTTGACAATTCCAAGAAGGGTGAACAAAGGACATCCGTCTTTGATCGCATCAACCCTTCAACTACTCGTCCTTCGATATTCCAAAGAATGAGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGCCTCCATTCTCCAAACCCTAGCCACCATTTTGTTTTTGGGTTTCTTATCCTTCCACAATGGCACTTGAATCCCAACAATCCTACCTTCTTCTTGCAGATTTTGCACCGAATTTTCCTTTTAGGCTCCGGATTATTCAAATCGACGACCGATTTAGAAGTTTCGGAACTCTCTTCTGCCGCTATAGATCGTCTCGTTCCGAGATTTGGTTCTGCATCGCGAGTTTCGACGAGTTTTGTGCCGATCAGATTTTTTGAGCAAACGACATCTATGGTGCGTCATTTTCATTCTTTGAGCTTCCAAAAGCAGCCATTGTACTGTATCTTTCGATCTTCTTCTTGTTGCTGCTCGAGTTCATTTGCCAAAAAAAAAAGCTTCTTCGTGTTTGGCACGTTCTTTATCTCGCAATCTCAAACTCACTCTGCTTCTCTATTTCATTCCACGCATTGGTACTTCTATATTTCATTCCACACATTGATAATTATCTGGAAATACCTTGCTCTGAGTTGGTTTTAGGAATAGAACTTTGGGGGGTTTAGCTATAATTGTACGAAGAGTAGGCACAATTCTTGTAGCTTAGTTCAATTAAGTAATCTGAAACTGTTGAGAATTAACTTTTCAAAAGTTAAGCGTGTAAGTTAAGTTTTCATTCTCTGTCTCTCTCTATGGTTGTTGCTCCATTGCTTGCTATACAGATTCGGTGTTGTTTATGGCTGTAGGGTAGTTTGTTTCCTGCATCCTGGAGTTAGAGATGGTAGGTTCTTTCCATTTACTTTAATTTCCCCAAAGTATAGTATAAATAAATAGAGTTCAAGCTAGAAAATTGAGAGGTGGTAGTGACAAGTGAGCATCAACAATGCCCCTTCTGGACCTCTGATTAAATTGGGACAATATAGAGAATATTAGCATCTGGGAGTGACAAATTAAGAAAGGGACCAAAAAAGACTAGCGAGCATCGTGCCTAACCACTCGAAAGGGCAGCATGATTGATAGAAATGACAACTAACAAGTAGGATTTGATTGCGCCTTGCTTTCAATGTGTTCCTAATCAAAATTCAAATGATAAATGAAGTTTGAGAAAATTTCATCTTGATCTAGAATGGAGCAATGTTTATTCTCTCCCTTTCTCTATCTCTTTGTGTGTGTTTGACTGGAATACAAAGTGAGGTGAGTAATTTAAATCTTGAATGGAAAATTTGAATCAATTAGATTTTGTTTGTTGGGTTATCTCTAATGAACTACTACAACCTACACTCTGGCTAAATTTTACTAAATTACGTTGAGAGAGAGAGAGATCATTTTCTGAAGCATTTTGACAACCATGAACTTTGGGAGCTCTCCTTCCCTTTCTCCTTTTAGAATCTCCTTCCCTTTCTCATTTTCTTGGTCGAGTAATAATATACCATTTCTTCGAGTGGAATGCGTACAATCTGCATAAAAATCTCTGTAGTTTTGAAGAAAACTTTCCTAAGCTGTCTCTATCCAACTGCACCCAGGAAACTTCTTCAGCTTCCTCTTATCATCATCCTCTTCAGCTTCCTCTTATTCATCATCCTCTTCAGCTTCACAACATGTCCCCAGCTCCCTGCATTAGCATACAGATCTGACAACAGCAGGCTATTCCCAACACCCCAGGTTCCAATTATGATAAATGTTTGGCTACTTCCTCAGCAAGTTCTATTTCTCCATGTTTCCTACAGAGAAAATGTTTGTGTTGTAGTTGGAGGTTATTTGATCTCTATTTTTGCTTGAAATTTAGTGATTAATTTTGTTTGTTGAAACTTGTGCTTTATGGGTGTGAATCTTAAAGATGGTTGGCTTTAGACTCTGAATTTGTTACAGCTTAGTTGAGTGGTCAGGTCACTCCTTCGATCTACAATCTCACCTCACTTAGAAACCTTTCTTTTCCAGTAAATCAACTCCAATGCCAAACTTAGGACATCAACTTCCAAACATCGAAATGTTGAGACTCCATACGAACCAATTACATACGAGGAGATTTGATTAATTCTAAGGTTAAATAATTTGGAGGGAAACATACCACCAAGTATTGGACAATGCCAACAATTGGTAGAGATGTCTCTTTCCAATAATTAACCTAATGGCTCCATACCAAAAGAGGTTTTTGTTACATCCGTGTTTGCTTTTGATTGGTCTGAAAATCATTTGATTGGTTCCATTCCCATGGAAGTGGGCAAGTTGGTCAACATCTACACCATTGTTAGTTACTCTTGTTTGCATTTATGTTTACTATATTAAATGAACTGTTCTCGAAGATGCTAAGTTGAAGCCAGTTTGATTATTTACATTCGACGGCATGCAGTCTCTGAAATTCGCAGCAACTGATTTGCTCTGGTGGCGAGGTCTTGCAAGAATTTTGGAAGCTAAAGGTTACTTGAAAGGAGATAACAGGGTATGCAATCAGCAATTGTAATTTTGAATAGATTTACTTTTTCTGTATCATTAATAAATATTCAAAACCATGTTTAGTCCTTGATGTGTATGTGTGTGTATTTTTTTTCTTGTTGTAAATTATTTAACATAGCCTATGTAGGTATGTGTTTTGTTTGTTTGTTTTTTCTCAGAGACTTGGTTAATCAACTCATGCAGTCCCGAGGACCATCTAACTAGGTATGAAATTGCTAATTTACATTATGCAGCAATTGCCAAGTATTGTCTATAATAGAGACTAGTGTTGTTGCTATCCTGCAGTTATGGTAGCACTATACTTATGTTGGTAACTATTTATAGGTAATAGTAATAGTTGTATGGGCTATCCTGCAGTTATGGTAG

mRNA sequence

ATGTTGGAACAACTACTAGAAGCGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAAAAGAGAGGGAGAAAGTCGATGATCCCAAGCATTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAAGATGTTTCGTCTTAAAGGACTTAATTCTAAAGCTAGTTGTGGAAGGAAAAATTGAGCTCGACCTTTATGAAGTAGCTCAATCAAATCTTGCTACAATCAAAGAAAAGAGCAAGCATCAAAGAAAGAATGATCCTAAGAAACCTCAACCCAAGAGGAAGAGAAGTAAAAAGTGTTCTCAACCTCGACAACCGGTGACTGTGAAAGAGATCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGAGAACTTTGCAACTTCCTACTACATCGACGTAGAAGAAGTTGACAATTCCAAGAAGGGCTCCGGATTATTCAAATCGACGACCGATTTAGAAGTTTCGGAACTCTCTTCTGCCGCTATAGATCGTCTCGTTCCGAGATTTGGTTCTGCATCGCGAGTTTCGACGAGTTTTGTGCCGATCAGATTTTTTGAGCAAACGACATCTATGGTGCGTCATTTTCATTCTTTGAGCTTCCAAAAGCAGCCATTATTCGGTGTTGTTTATGGCTGTAGGGTAGTTTGTTTCCTGCATCCTGGAGTTAGAGATGTTTTGAAGAAAACTTTCCTAAGCTGTCTCTATCCAACTGCACCCAGGAAACTTCTTCAGCTTCCTCTTATCATCATCCTCTTCAGCTTCCTCTTATTCATCATCCTCTTCAGCTTCACAACATGTCCCCAGCTCCCTGCATTAGCATACAGATCTGACAACAGCAGGCTATTCCCAACACCCCAGTCTCTGAAATTCGCAGCAACTGATTTGCTCTGGTGGCGAGGTCTTGCAAGAATTTTGGAAGCTAAAGGTTACTTGAAAGGAGATAACAGGGTAATAGTAATAGTTGTATGGGCTATCCTGCAGTTATGGTAG

Coding sequence (CDS)

ATGTTGGAACAACTACTAGAAGCGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAAAAGAGAGGGAGAAAGTCGATGATCCCAAGCATTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAAGATGTTTCGTCTTAAAGGACTTAATTCTAAAGCTAGTTGTGGAAGGAAAAATTGAGCTCGACCTTTATGAAGTAGCTCAATCAAATCTTGCTACAATCAAAGAAAAGAGCAAGCATCAAAGAAAGAATGATCCTAAGAAACCTCAACCCAAGAGGAAGAGAAGTAAAAAGTGTTCTCAACCTCGACAACCGGTGACTGTGAAAGAGATCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGAGAACTTTGCAACTTCCTACTACATCGACGTAGAAGAAGTTGACAATTCCAAGAAGGGCTCCGGATTATTCAAATCGACGACCGATTTAGAAGTTTCGGAACTCTCTTCTGCCGCTATAGATCGTCTCGTTCCGAGATTTGGTTCTGCATCGCGAGTTTCGACGAGTTTTGTGCCGATCAGATTTTTTGAGCAAACGACATCTATGGTGCGTCATTTTCATTCTTTGAGCTTCCAAAAGCAGCCATTATTCGGTGTTGTTTATGGCTGTAGGGTAGTTTGTTTCCTGCATCCTGGAGTTAGAGATGTTTTGAAGAAAACTTTCCTAAGCTGTCTCTATCCAACTGCACCCAGGAAACTTCTTCAGCTTCCTCTTATCATCATCCTCTTCAGCTTCCTCTTATTCATCATCCTCTTCAGCTTCACAACATGTCCCCAGCTCCCTGCATTAGCATACAGATCTGACAACAGCAGGCTATTCCCAACACCCCAGTCTCTGAAATTCGCAGCAACTGATTTGCTCTGGTGGCGAGGTCTTGCAAGAATTTTGGAAGCTAAAGGTTACTTGAAAGGAGATAACAGGGTAATAGTAATAGTTGTATGGGCTATCCTGCAGTTATGGTAG

Protein sequence

MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKIELDLYEVAQSNLATIKEKSKHQRKNDPKKPQPKRKRSKKCSQPRQPVTVKEIFSKTFHKKEKENFATSYYIDVEEVDNSKKGSGLFKSTTDLEVSELSSAAIDRLVPRFGSASRVSTSFVPIRFFEQTTSMVRHFHSLSFQKQPLFGVVYGCRVVCFLHPGVRDVLKKTFLSCLYPTAPRKLLQLPLIIILFSFLLFIILFSFTTCPQLPALAYRSDNSRLFPTPQSLKFAATDLLWWRGLARILEAKGYLKGDNRVIVIVVWAILQLW
Homology
[Close]
BLAST of Lag0039391 vs. NCBI nr
Match: TYK15207.1 (Retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 114.8 bits (286), Expect = 1.4e-21
Identity = 54/76 (71.05%), Postives = 65/76 (85.53%), Query Frame = 0 

Query: 1   MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKI 60
           MLEQLLE QLI+LPKCKRPK+  KVDDP +CKYHRVI HPVE+CF+LK++ILKL  E KI
Sbjct: 137 MLEQLLENQLIQLPKCKRPKQARKVDDPNYCKYHRVISHPVEKCFLLKEMILKLAREKKI 196

Query: 61  ELDLYEVAQSNLATIK 77
           ELD+YEVAQ+N   ++
Sbjct: 197 ELDIYEVAQTNHVAVE 212

[Close]
BLAST of Lag0039391 vs. NCBI nr
Match: KAA0066166.1 (Retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 113.6 bits (283), Expect = 3.2e-21
Identity = 54/76 (71.05%), Postives = 64/76 (84.21%), Query Frame = 0 

Query: 1   MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKI 60
           MLEQLLE QLI+LPKCKRPK+  KVDDP +CKYHRVI HPVE+CF+LK +ILKL  E KI
Sbjct: 137 MLEQLLENQLIQLPKCKRPKQARKVDDPNYCKYHRVISHPVEKCFLLKKMILKLAREKKI 196

Query: 61  ELDLYEVAQSNLATIK 77
           ELD+YEVAQ+N   ++
Sbjct: 197 ELDIYEVAQTNHVAVE 212

[Close]
BLAST of Lag0039391 vs. NCBI nr
Match: TYK03695.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 112.8 bits (281), Expect = 5.5e-21
Identity = 57/79 (72.15%), Postives = 66/79 (83.54%), Query Frame = 0 

Query: 1   MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKI 60
           MLEQLLE QLI+LPKCKRPK+ EKVDDP +CKYHRVI HPVE+CFVLK+LILKL  E KI
Sbjct: 448 MLEQLLENQLIQLPKCKRPKQAEKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKI 507

Query: 61  ELDLYEVAQSNLATIKEKS 80
           EL++ EVAQ+N   I+  S
Sbjct: 508 ELNIDEVAQTNHVAIEMTS 526

[Close]
BLAST of Lag0039391 vs. NCBI nr
Match: KAA0025376.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-20
Identity = 56/79 (70.89%), Postives = 66/79 (83.54%), Query Frame = 0 

Query: 1   MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKI 60
           MLEQLLE QLI+LP+CKRP++ EKVDDP +CKYHRVI HPVE+CFVLK+LILKL  E KI
Sbjct: 101 MLEQLLENQLIQLPECKRPEQAEKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKI 160

Query: 61  ELDLYEVAQSNLATIKEKS 80
           ELD+ EVAQ+N   I+  S
Sbjct: 161 ELDIDEVAQTNHVAIEMTS 179

[Close]
BLAST of Lag0039391 vs. NCBI nr
Match: TYK09793.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-20
Identity = 56/79 (70.89%), Postives = 66/79 (83.54%), Query Frame = 0 

Query: 1   MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKI 60
           MLEQLLE QLI+LP+CKRP++ EKVDDP +CKYHRVI HPVE+CFVLK+LILKL  E KI
Sbjct: 236 MLEQLLENQLIQLPECKRPEQAEKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKI 295

Query: 61  ELDLYEVAQSNLATIKEKS 80
           ELD+ EVAQ+N   I+  S
Sbjct: 296 ELDIDEVAQTNHVAIEMTS 314

[Close]
BLAST of Lag0039391 vs. ExPASy TrEMBL
Match: A0A5D3CTF5 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00840 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 7.0e-22
Identity = 54/76 (71.05%), Postives = 65/76 (85.53%), Query Frame = 0 

Query: 1   MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKI 60
           MLEQLLE QLI+LPKCKRPK+  KVDDP +CKYHRVI HPVE+CF+LK++ILKL  E KI
Sbjct: 137 MLEQLLENQLIQLPKCKRPKQARKVDDPNYCKYHRVISHPVEKCFLLKEMILKLAREKKI 196

Query: 61  ELDLYEVAQSNLATIK 77
           ELD+YEVAQ+N   ++
Sbjct: 197 ELDIYEVAQTNHVAVE 212

[Close]
BLAST of Lag0039391 vs. ExPASy TrEMBL
Match: A0A5A7VII4 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G001730 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.6e-21
Identity = 54/76 (71.05%), Postives = 64/76 (84.21%), Query Frame = 0 

Query: 1   MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKI 60
           MLEQLLE QLI+LPKCKRPK+  KVDDP +CKYHRVI HPVE+CF+LK +ILKL  E KI
Sbjct: 137 MLEQLLENQLIQLPKCKRPKQARKVDDPNYCKYHRVISHPVEKCFLLKKMILKLAREKKI 196

Query: 61  ELDLYEVAQSNLATIK 77
           ELD+YEVAQ+N   ++
Sbjct: 197 ELDIYEVAQTNHVAVE 212

[Close]
BLAST of Lag0039391 vs. ExPASy TrEMBL
Match: A0A5D3BX77 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00570 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.6e-21
Identity = 57/79 (72.15%), Postives = 66/79 (83.54%), Query Frame = 0 

Query: 1   MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKI 60
           MLEQLLE QLI+LPKCKRPK+ EKVDDP +CKYHRVI HPVE+CFVLK+LILKL  E KI
Sbjct: 448 MLEQLLENQLIQLPKCKRPKQAEKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKI 507

Query: 61  ELDLYEVAQSNLATIKEKS 80
           EL++ EVAQ+N   I+  S
Sbjct: 508 ELNIDEVAQTNHVAIEMTS 526

[Close]
BLAST of Lag0039391 vs. ExPASy TrEMBL
Match: A0A5D3CD55 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00850 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 5.9e-21
Identity = 56/79 (70.89%), Postives = 66/79 (83.54%), Query Frame = 0 

Query: 1   MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKI 60
           MLEQLLE QLI+LP+CKRP++ EKVDDP +CKYHRVI HPVE+CFVLK+LILKL  E KI
Sbjct: 236 MLEQLLENQLIQLPECKRPEQAEKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKI 295

Query: 61  ELDLYEVAQSNLATIKEKS 80
           ELD+ EVAQ+N   I+  S
Sbjct: 296 ELDIDEVAQTNHVAIEMTS 314

[Close]
BLAST of Lag0039391 vs. ExPASy TrEMBL
Match: A0A5A7SHQ6 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1220G00030 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 5.9e-21
Identity = 56/79 (70.89%), Postives = 66/79 (83.54%), Query Frame = 0 

Query: 1   MLEQLLEAQLIELPKCKRPKEREKVDDPKHCKYHRVIGHPVERCFVLKDLILKLVVEGKI 60
           MLEQLLE QLI+LP+CKRP++ EKVDDP +CKYHRVI HPVE+CFVLK+LILKL  E KI
Sbjct: 101 MLEQLLENQLIQLPECKRPEQAEKVDDPNYCKYHRVISHPVEKCFVLKELILKLAREKKI 160

Query: 61  ELDLYEVAQSNLATIKEKS 80
           ELD+ EVAQ+N   I+  S
Sbjct: 161 ELDIDEVAQTNHVAIEMTS 179

[Close]
BLAST of Lag0039391 vs. TAIR 10
Match: AT5G27680.1 (RECQ helicase SIM )

HSP 1 Score: 45.1 bits (105), Expect = 1.3e-04
Identity = 18/27 (66.67%), Postives = 22/27 (81.48%), Query Frame = 0 

Query: 286 QSLKFAATDLLWWRGLARILEAKGYLK 313
           Q  KF  TD LWW+GLARI+EA+GY+K
Sbjct: 729 QCEKFKETDCLWWKGLARIMEAEGYIK 755

The following BLAST results are available for this feature:
BLAST of Lag0039391 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK15207.11.4e-2171.05Retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0066166.13.2e-2171.05Retrotransposon gag protein [Cucumis melo var. makuwa][more]
TYK03695.15.5e-2172.15retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0025376.11.2e-2070.89retrotransposon gag protein [Cucumis melo var. makuwa][more]
TYK09793.11.2e-2070.89ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
BLAST of Lag0039391 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0039391 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CTF57.0e-2271.05Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5A7VII41.6e-2171.05Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5D3BX772.6e-2172.15Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A5D3CD555.9e-2170.89Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7SHQ65.9e-2170.89Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
BLAST of Lag0039391 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G27680.11.3e-0466.67RECQ helicase SIM [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0039391.1Lag0039391.1mRNA