Lag0039325 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGAAGTGCTTTACATTCGACATGTTTGACTTAACCCCCATGATCGAGGAATACCAAGCATTAATCTCCATATCGTCCAACGCTGGAATCAAAGTGTATAAGTGGGATCGGAGGTTGACTTTGCAGAGATCGTTATCTAAGTTTTTGGAAAATGTCCATGCATCCAACATAAAGAAGCGGATGAAGACCAAAGGAGAGAGGAATTGTATTCCTATCGATTATTTGATAGGCCTCACACGTTCGAGCCAGCCTGAGAGAAAAGGTCTATCTCTTTTGGCAATGTGTATATACGACATGGTGATTTTTCTGAGGGTCAAAGGTAGGGCTGTTCGCCGGTCGGTCGGAGTCGGTTTTGGACGAAAACCGACGCCGACAACCGACCCTTCGGTTTTCGGTCGTTCGGTGATGATTAGTTTTGGGATGCTTCATGAAACCGACCGACCAAATACACGGTCAGTCGGTCGGTTTCGTCGATTTTTTAAATTTAATTGATGAAATGCGATTTTGTTCATGGAGAGTTTGAAACATGGTGAGAAGGAGAAGAAGGAAGAGACGAGAGAGAAGAGGAGATCGGTTACGAAGAGGGAAAAATAGAGAGAAAATAGTAAAAGAAAAGGGAGAAAAATAGTTTGGTGAGGAAGAGAGAGAGAGACGGACGACAGACGGCGCCGAACGGTGAGGAAGAGAGAGAGAGAGACGGACGACGGCACCGAACTGTGAGGAAGAGAGAGATAGACGGACGACGGCGCCGGACGGTGAGGAAGACAGTGAAGAAGACATTGAGGAAGAGAAAATGGAGAAGGAAAAAGAAAGAGAGAGAAATGAGCTGAAAAAATGAAAAGAAGAGAAAAGAAAAGAGGGGCAAGAAACGAGAGATGGAAAGAGAGAAGAATAAAAAATAATAAATTTAAAAAAAGTTATCATTACTTTTTCTGAAAAATGTGACATTTTGAAAAGACTACATGGCAGTCATGACATGTGCATACTGTACTTTTTGTGTGTAAAGTAAGTTTTCTTTTAATTAACAGAGTTTACATATTTTTTTTTATTAATAAACTAAAATCGGTCGGTCGGTCGGTTTTCTCTATTTTTGGGTGGACCGACCGACCGACGGTCGGTTTTTCCAATGAAAAAAACAGACTCTGACCGACAGTGGTAGAAAACCGACCAACCGACGTCGGTTCGGTCAGTTTTGGTCGGTCGGATCGGTTTTCGGTCTCATTTTGAACACCCCTAGTCAAAGGGTATGTAGAAGAAGAGGTCATCAAACTCTTCGTTGGAATAGAGCGTGGGATAAATCCAGTTGTCCCGATTTTAGCAAAAACTTTTAGATCATTGAGTTATTGTAGAGCCCAAGGCAAAGGAAAGTTTTTCAGTTGTGCACCAAAACTCTTTATTTGGCTTTCTAGTCATGTGAAGTATCCGCGTATCCGCACGAGTTTAATTATCCTCCAGTCAAGTTTAGCAATTCATGGAATAGTTCAAGGAATGTGGTTAATGACTTCATTAGTGCACATTGGAGCCCGAACGTTCCCAATGTCGATGCGTGGCTGTCTTTTCTGTGCCACATCACCTTAGAAGAAGTGATCTGGAGGGCACCATGATTACCTTCAAGGCCTATAACATATCGATGTGGACAATTACCTTTCGTCCCATTGTTAGGGCCCTGGGGAGGTGTCGCTTACACGCCTTTATTAGCATTGTGTCAAGTATGGCTGAAACAATTCGTCCCAACTATCCATGGGTTGGAAGACTGGGAATTCTCGTATGATTCTGATGCGACAAGTGCCCAGATTCATCAGGCAGTGGAGGCATGGAAAGTAGTGAGAAAGATGAAAAACGCACCTATGAGGGCACAACGATGTCATATGAGAATTGGAGAGCATCTCGAAATGGATTCGAGGTTTCATTGCACCAAAATCAATAG ATGCTGAAGTGCTTTACATTCGACATGTTTGACTTAACCCCCATGATCGAGGAATACCAAGCATTAATCTCCATATCGTCCAACGCTGGAATCAAAGTGTATAAGTGGGATCGGAGGTTGACTTTGCAGAGATCGTTATCTAAGTTTTTGGAAAATGTCCATGCATCCAACATAAAGAAGCGGATGAAGACCAAAGGAGAGAGGAATTGTATTCCTATCGATTATTTGATAGGCCTCACACGTTCGAGCCAGCCTGAGAGAAAAGGTCTATCTCTTTTGGCAATGTGTATATACGACATGGTGATTTTTCTGAGGGTCAAAGGTAGGGCTGTTCGCCGGTCGGTCGGAGTCGGTTTTGGACGAAAACCGACGCCGACAACCGACCCTTCGGTTTTCGGTCGTTCGGTGATGATTAGTTTTGGGATGCTTCATGAAACCGACCGACCAAATACACGAAGAAGTGATCTGGAGGGCACCATGATTACCTTCAAGGCCTATAACATATCGATGTGGACAATTACCTTTCGTCCCATTGTTAGGGCCCTGGGGAGGTGTCGCTTACACGCCTTTATTAGCATTGTGTCAAATTCATCAGGCAGTGGAGGCATGGAAAGTAGTGAGAAAGATGAAAAACGCACCTATGAGGGCACAACGATGTCATATGAGAATTGGAGAGCATCTCGAAATGGATTCGAGGTTTCATTGCACCAAAATCAATAG ATGCTGAAGTGCTTTACATTCGACATGTTTGACTTAACCCCCATGATCGAGGAATACCAAGCATTAATCTCCATATCGTCCAACGCTGGAATCAAAGTGTATAAGTGGGATCGGAGGTTGACTTTGCAGAGATCGTTATCTAAGTTTTTGGAAAATGTCCATGCATCCAACATAAAGAAGCGGATGAAGACCAAAGGAGAGAGGAATTGTATTCCTATCGATTATTTGATAGGCCTCACACGTTCGAGCCAGCCTGAGAGAAAAGGTCTATCTCTTTTGGCAATGTGTATATACGACATGGTGATTTTTCTGAGGGTCAAAGGTAGGGCTGTTCGCCGGTCGGTCGGAGTCGGTTTTGGACGAAAACCGACGCCGACAACCGACCCTTCGGTTTTCGGTCGTTCGGTGATGATTAGTTTTGGGATGCTTCATGAAACCGACCGACCAAATACACGAAGAAGTGATCTGGAGGGCACCATGATTACCTTCAAGGCCTATAACATATCGATGTGGACAATTACCTTTCGTCCCATTGTTAGGGCCCTGGGGAGGTGTCGCTTACACGCCTTTATTAGCATTGTGTCAAATTCATCAGGCAGTGGAGGCATGGAAAGTAGTGAGAAAGATGAAAAACGCACCTATGAGGGCACAACGATGTCATATGAGAATTGGAGAGCATCTCGAAATGGATTCGAGGTTTCATTGCACCAAAATCAATAG MLKCFTFDMFDLTPMIEEYQALISISSNAGIKVYKWDRRLTLQRSLSKFLENVHASNIKKRMKTKGERNCIPIDYLIGLTRSSQPERKGLSLLAMCIYDMVIFLRVKGRAVRRSVGVGFGRKPTPTTDPSVFGRSVMISFGMLHETDRPNTRRSDLEGTMITFKAYNISMWTITFRPIVRALGRCRLHAFISIVSNSSGSGGMESSEKDEKRTYEGTTMSYENWRASRNGFEVSLHQNQ Homology
BLAST of Lag0039325 vs. NCBI nr
Match: KAA0032013.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 153.3 bits (386), Expect = 2.7e-33 Identity = 97/260 (37.31%), Postives = 143/260 (55.00%), Query Frame = 0
BLAST of Lag0039325 vs. NCBI nr
Match: KAA0033221.1 (uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]) HSP 1 Score: 147.5 bits (371), Expect = 1.5e-31 Identity = 107/290 (36.90%), Postives = 146/290 (50.34%), Query Frame = 0
BLAST of Lag0039325 vs. NCBI nr
Match: KAA0046606.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 142.9 bits (359), Expect = 3.6e-30 Identity = 73/127 (57.48%), Postives = 92/127 (72.44%), Query Frame = 0
BLAST of Lag0039325 vs. NCBI nr
Match: KAA0065295.1 (uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa]) HSP 1 Score: 141.4 bits (355), Expect = 1.0e-29 Identity = 74/127 (58.27%), Postives = 92/127 (72.44%), Query Frame = 0
BLAST of Lag0039325 vs. NCBI nr
Match: TYK16834.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 129.0 bits (323), Expect = 5.4e-26 Identity = 64/119 (53.78%), Postives = 86/119 (72.27%), Query Frame = 0
BLAST of Lag0039325 vs. ExPASy TrEMBL
Match: A0A5A7SNY0 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G001110 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 1.3e-33 Identity = 97/260 (37.31%), Postives = 143/260 (55.00%), Query Frame = 0
BLAST of Lag0039325 vs. ExPASy TrEMBL
Match: A0A5A7SUT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00100 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 7.0e-32 Identity = 107/290 (36.90%), Postives = 146/290 (50.34%), Query Frame = 0
BLAST of Lag0039325 vs. ExPASy TrEMBL
Match: A0A5A7TXA1 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001520 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 1.7e-30 Identity = 73/127 (57.48%), Postives = 92/127 (72.44%), Query Frame = 0
BLAST of Lag0039325 vs. ExPASy TrEMBL
Match: A0A5A7VHI3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00080 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 5.0e-30 Identity = 74/127 (58.27%), Postives = 92/127 (72.44%), Query Frame = 0
BLAST of Lag0039325 vs. ExPASy TrEMBL
Match: A0A5D3D0S2 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G001090 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 2.6e-26 Identity = 64/119 (53.78%), Postives = 86/119 (72.27%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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