Lag0039319 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0039319
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionkeratin, type II cytoskeletal 3 isoform X2
Locationchr2: 41270839 .. 41274361 (+)
RNA-Seq ExpressionLag0039319
SyntenyLag0039319
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCGAAATATGAACGGGAACAGACAGGAAGGCGGAGAAGATGAAAATGGAGTAATATGGAAGCTTCCAGTTCTGAAATCTTCCCGTATCGGAAAGCTAGGTCCCGCCTTCGGTCTGGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTCGTCGGAGGTTACTTCTTCATCCTCTCTCTTTCCTTTTTTTAGTCCCAATTAACTTGTTATTCCCCTGTTGGATTCATTTCAATTTTGTTGCTTAAAATCAATTAGATTAGCGGAATCGATTTGTTTAATGCGTAATAATCAACTCCTTTGGCGGGGCTTAGCTTTTGGTGAATTGAAAATTTTGCCTCATCGATTGTTCTACCCTACAACTTGCTCTGATTGCTTTAGTTGGAAGTATTATTATTGAATTGGAGGGTGAGGTAGGTTAGGTGGGGTTATTCAGTCTGTAGTGCTAATTTGGTTTAGCCTGATAATCGTTTCACGATTATTTAATTCGTTTTTGTGCCTTCTACTGCCATTGACTGTCGCCCTTCTTCAATATTTTGTGTTTCTTGCATTCCGGTTGAAAGAATATAGGGGTTTGGATTGTATATTTATTGTTATGCCTCCTGCTGAAATTCTGTGGCCTTGTGATTTTCCTCCCTAAGTTTAGTTAGCGTTTGACCTTGTTCTGAAGAAGCTGACAGATGGACGCCATACAAGATCACAGCATTTCTACTTTTCAAAAAGTTACGATGAAAAGATGCTTTGGTAAAATATGTTTCAACACATTGCAACTTATTGTGTATGGTAAAATATATAGAAGTTTAGACTTGAGAAAGGGAATGCTATTTTCTAGGATGCAATATAATCCGAATATTACCAAAAGGAATATAGTGTACCACTAAGCAAATAACAAAATTTCCTTCAAAATAGCTCAAATATGAATCCCAAATAGGCTCAGATGTAATACAATTCTGGTTGGTATCTTTTCTTTATCGTTATGATCTTCTTCTTCTTCTTCTTTTTTGTTTGTTTTTCTTCATTTGTTTCTTCTGTTTTATTTAGACTATCTGTAGTGAACTATATGTTTGTTTACGTGATTGTAATCAACATGAAAAGCTGTTACCATCTCAATTTTGGAGTGTACAAGCGTTATTCGGCAGCATGTTTTAAGTTCCATCAATCTTTTTAGAAGGGTTTTTGGGGACCAAAAGCTCAAAATATACTAAGCTTTAAAAACGAACTAATTTCTAAGTTGATGGGGAATTATTCTCTCAATCCTTTGTGATAGTATGTTTTTAGTCTATAAGAAACAACGTTGATTTTCCTTTTGGTATTAGACTTTATATTAATGAGAAAAAATAGAACACGAGGAGTTGGGAAGACAAAGCATTCTTTGTGTCTCCCATATGCACGTGCATACACACTTAAAAGAAGAAGAAGAAGCTATAATGGATTTTGAGTTTTTATAGAAGGTAGGGCTTGAGTTTCAACTAATAAATATTATCACCATGCAAATTTTATCTTGAACTTTACACTGTAGTGAACCATCCTTGTTTTATTAAACTACTTAAATAGATGTATTTGTAAACATTGTTCTCCACTCTAGGTGCTGGATTTGGGCCCGGAATTCCTGGCTTACAACTTGGCTTTGGTCTTGGTGCTGGATGTGGAGTTGGCTTAGGATTTGGTTATGGTGTTGGCAGAGGCATTGCCCAAGATGACAAACGGAGATACTCTAATGTTGGGGATCTATTACATGGTCATCAAAGTATTTTTCCTCAGTAAGTTCTAAAAACTAATTGTTTTCAACTTGTGATCAGACCAACTGACCATCATGTTCTGTTTTTTTTTTTTTTCTTTTTTTGAAGAAGACCATCATGTTCTGTTGATGCATGCATTATTGCAAGTTAGGGACAAATACCTTTTTGCTTCTAATGTTGATTTGGTGACATGCCTTTTCTCCAACCATATACATACTTAGGTGCCAAAGTGAGTATAGCTCAACAGTAATTGGCATGTACTCTCGACCAAGAGGTCAAAGGTTCAAATCCCCCACCCTCAAAATGTTGTTGAACTCAAAAAAAAAAAAAAAAAACGTATACTTACTTAGGTGGCAGTTTTTTATGACATGCTTCAAAATAGTCTCTCTCTTTATTATCTTCTCTCTCTTCTCTCTCTTCCCACTCTATTCTCCTCTCTCTCTATCCCATTTCTCTCTCTTTTTGCTTAGTTTCTCCCTTCATGTTCTCTCTCCCTCTATTTTTTTTCTCTCTTATCTGTCTGTCCCTTTTCTGTGTTGTGATTTTCTATCCACATCTACCCCTTTCAAAGGATGCGTTACGATAAATATATCTTTAGTTGGTCATTTCATCTTGATCAAATTTAGCTGATCTTCTTTAGTAACTTGGAATAATTGGGGTTAACTTAGACATAGGTCTTGAACTCTTTTTCATTTTTCTCATTTCTAATACATTTCTATGGCTATTTGAATGAATATCCCAACAAAAATTTGGGCTTAACATTTATCTGTAGTTTAAAGAGTGCTTCAGATTTGAACAAAACCTCACAAGCATTCATTGTTTTGGCTTTATTTGGACCCATTCATTGTTGTGGGGTGTTTCGGACAAGACCATGAGTGCATCAGTGCAAAAGTCAAGCAAAAACATATACTGTATACTGCCTTGAAGAGTTGCCTTTCTCTATTTATTTGGAGGTTCATTGGATAAGTCTATGTTCTCATTTGCGTTGGTAATGATAAAGCAAGCAAGAAGAGTGAGAATGGGAGATGGAGAGAATAGAGAGAAAAGGAAGGAGAGGAGGGAGAGGAGGGAAAGAGTGAGATGAAAAAGAGATGAGAGAGAAATCTATAAGTCTTGAGCTGTTGTTTAATGGGGACGAGAAGACATAGGAGAACCAAGATCAATCTAATACTGGGAGTGGAAAGGAGTCGAAGCAGTCAAGCAGGAGTTGGAGAATCCAGAAACTAATCTTGAACAGGTGATAGTCTTGGTATCGAATTGAAGACACGACGGGTTTCATCTAATCCTTCGACGATGGCTGAGGTCCTTTTGTCGGCTTCCGCAAGTCAGTAACAGATTGGTCTATCTTCAGAGGGTCCATCTTGACTGATGGTCGAGGTAAATTCAGATGGGATGCCAAACTAGATACACTTCTCTTCTTTGGATTCTTTGCCTACCACTTTGGGTCTTGGGGATGTGAGAGGTTTGCCTTATCTGAGTGTGTTGTCCTATCCGTCCCGTGCTTCGATGGGTCAAGTAGGAAGTGCTTTGTCGTCTGTTTGCCCCTTTTTTGTTAACCCTGGTTCTTTTTTCGTTAACCCTGGTTCTTTTCTTTTATTTTGTGTTCTAATGCTTTGAGTAGTGGGTTCGATGGGAATGGTCATCCATGTGTGGGGGGGTTGGTTATAGGAGATTCGGGTTGTTGCTCTCAATCCCTAGGTTATCAAGCTGCTCCATTCTTTGGAGGTGTTATTGGTCAATGGCCGTCTGGATGGGCTGCTTTAGTCTCAGTTGGCATTTAG

mRNA sequence

ATGCCTCGAAATATGAACGGGAACAGACAGGAAGGCGGAGAAGATGAAAATGGAGTAATATGGAAGCTTCCAGTTCTGAAATCTTCCCGTATCGGAAAGCTAGGTCCCGCCTTCGGTCTGGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTCGTCGGAGGTGCTGGATTTGGGCCCGGAATTCCTGGCTTACAACTTGGCTTTGGTCTTGGTGCTGGATGTGGAGTTGGCTTAGGATTTGGTTATGGTGTTGGCAGAGGCATTGCCCAAGATGACAAACGGAGATACTCTAATGTTGGGGATCTATTACATGGTCATCAAAGTATTTTTCCTCAAGGGTCCATCTTGACTGATGGTCGAGGTAAATTCAGATGGGATGCCAAACTAGATACACTTCTCTTCTTTGGATTCTTTGCCTACCACTTTGGGTCTTGGGGATGTGAGAGGTTTGCCTTATCTGAGTGTGTTGTCCTATCCGTCCCGTGCTTCGATGGGTCAAGAGATTCGGGTTGTTGCTCTCAATCCCTAGGTTATCAAGCTGCTCCATTCTTTGGAGGTGTTATTGGTCAATGGCCGTCTGGATGGGCTGCTTTAGTCTCAGTTGGCATTTAG

Coding sequence (CDS)

ATGCCTCGAAATATGAACGGGAACAGACAGGAAGGCGGAGAAGATGAAAATGGAGTAATATGGAAGCTTCCAGTTCTGAAATCTTCCCGTATCGGAAAGCTAGGTCCCGCCTTCGGTCTGGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTCGTCGGAGGTGCTGGATTTGGGCCCGGAATTCCTGGCTTACAACTTGGCTTTGGTCTTGGTGCTGGATGTGGAGTTGGCTTAGGATTTGGTTATGGTGTTGGCAGAGGCATTGCCCAAGATGACAAACGGAGATACTCTAATGTTGGGGATCTATTACATGGTCATCAAAGTATTTTTCCTCAAGGGTCCATCTTGACTGATGGTCGAGGTAAATTCAGATGGGATGCCAAACTAGATACACTTCTCTTCTTTGGATTCTTTGCCTACCACTTTGGGTCTTGGGGATGTGAGAGGTTTGCCTTATCTGAGTGTGTTGTCCTATCCGTCCCGTGCTTCGATGGGTCAAGAGATTCGGGTTGTTGCTCTCAATCCCTAGGTTATCAAGCTGCTCCATTCTTTGGAGGTGTTATTGGTCAATGGCCGTCTGGATGGGCTGCTTTAGTCTCAGTTGGCATTTAG

Protein sequence

MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQGSILTDGRGKFRWDAKLDTLLFFGFFAYHFGSWGCERFALSECVVLSVPCFDGSRDSGCCSQSLGYQAAPFFGGVIGQWPSGWAALVSVGI
Homology
[Close]
BLAST of Lag0039319 vs. NCBI nr
Match: XP_038889093.1 (ctenidin-1 isoform X1 [Benincasa hispida])

HSP 1 Score: 216.1 bits (549), Expect = 2.8e-52
Identity = 105/113 (92.92%), Postives = 108/113 (95.58%), Query Frame = 0 

Query: 1   MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRN NGNR +GGEDE G++W LPVLKSSR GKLGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNTNGNRHQGGEDEGGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQ 114
           GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQ
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQ 113

[Close]
BLAST of Lag0039319 vs. NCBI nr
Match: XP_038889094.1 (glycine-rich cell wall structural protein 1 isoform X2 [Benincasa hispida])

HSP 1 Score: 216.1 bits (549), Expect = 2.8e-52
Identity = 105/113 (92.92%), Postives = 108/113 (95.58%), Query Frame = 0 

Query: 1   MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRN NGNR +GGEDE G++W LPVLKSSR GKLGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNTNGNRHQGGEDEGGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQ 114
           GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQ
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQ 113

[Close]
BLAST of Lag0039319 vs. NCBI nr
Match: XP_022974026.1 (keratin, type II cytoskeletal 3 isoform X2 [Cucurbita maxima])

HSP 1 Score: 214.9 bits (546), Expect = 6.3e-52
Identity = 105/116 (90.52%), Postives = 112/116 (96.55%), Query Frame = 0 

Query: 1   MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNG+R+EGGEDE+G++WKLPVLKSSRIG+LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGSRREGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQGSI 117
           GIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNVGDLL+G QSIFPQ  I
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPQDEI 116

[Close]
BLAST of Lag0039319 vs. NCBI nr
Match: XP_023521209.1 (fibroin heavy chain isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.5 bits (545), Expect = 8.3e-52
Identity = 105/116 (90.52%), Postives = 111/116 (95.69%), Query Frame = 0 

Query: 1   MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNG+R EG EDE+G++WKLPVLKSSRIG+LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGSRHEGREDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQGSI 117
           GIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNVGDLL+GHQSIFPQ  I
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGHQSIFPQDEI 116

[Close]
BLAST of Lag0039319 vs. NCBI nr
Match: XP_022932820.1 (keratin, type II cytoskeletal 2 epidermal isoform X2 [Cucurbita moschata])

HSP 1 Score: 214.5 bits (545), Expect = 8.3e-52
Identity = 105/116 (90.52%), Postives = 111/116 (95.69%), Query Frame = 0 

Query: 1   MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNG+R EGGEDE+G++WKLPVLKSSRIG+LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQGSI 117
           GIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNVGDLL+G QSIFPQ  I
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPQDEI 116

[Close]
BLAST of Lag0039319 vs. ExPASy TrEMBL
Match: A0A6J1IA95 (keratin, type II cytoskeletal 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472645 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 3.1e-52
Identity = 105/116 (90.52%), Postives = 112/116 (96.55%), Query Frame = 0 

Query: 1   MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNG+R+EGGEDE+G++WKLPVLKSSRIG+LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGSRREGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQGSI 117
           GIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNVGDLL+G QSIFPQ  I
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPQDEI 116

[Close]
BLAST of Lag0039319 vs. ExPASy TrEMBL
Match: A0A6J1F360 (keratin, type II cytoskeletal 2 epidermal isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439279 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 4.0e-52
Identity = 105/116 (90.52%), Postives = 111/116 (95.69%), Query Frame = 0 

Query: 1   MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNG+R EGGEDE+G++WKLPVLKSSRIG+LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFPQGSI 117
           GIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNVGDLL+G QSIFPQ  I
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFPQDEI 116

[Close]
BLAST of Lag0039319 vs. ExPASy TrEMBL
Match: A0A6J1ICW2 (keratin, type II cytoskeletal 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472645 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 3.4e-51
Identity = 103/112 (91.96%), Postives = 110/112 (98.21%), Query Frame = 0 

Query: 1   MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNG+R+EGGEDE+G++WKLPVLKSSRIG+LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGSRREGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFP 113
           GIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNVGDLL+G QSIFP
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFP 112

[Close]
BLAST of Lag0039319 vs. ExPASy TrEMBL
Match: A0A6J1EY31 (keratin, type II cytoskeletal 2 epidermal isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439279 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 4.4e-51
Identity = 103/112 (91.96%), Postives = 109/112 (97.32%), Query Frame = 0 

Query: 1   MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNG+R EGGEDE+G++WKLPVLKSSRIG+LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGSRHEGGEDESGMLWKLPVLKSSRIGRLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFP 113
           GIPGLQLGFGLGAGCGVGLGFGYG GRGIAQDDKRRYSNVGDLL+G QSIFP
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGAGRGIAQDDKRRYSNVGDLLNGRQSIFP 112

[Close]
BLAST of Lag0039319 vs. ExPASy TrEMBL
Match: A0A1S4E347 (glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103498610 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 8.4e-50
Identity = 101/112 (90.18%), Postives = 104/112 (92.86%), Query Frame = 0 

Query: 1   MPRNMNGNRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGP 60
           MPRNMNGNR   GEDE G++W LPVLKSSR G LGPAFGLGVGCGVGFGIGLVGGAGFGP
Sbjct: 1   MPRNMNGNRNRDGEDERGLLWNLPVLKSSRFGNLGPAFGLGVGCGVGFGIGLVGGAGFGP 60

Query: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDLLHGHQSIFP 113
           GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGD+L GHQSIFP
Sbjct: 61  GIPGLQLGFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSIFP 112

[Close]
BLAST of Lag0039319 vs. TAIR 10
Match: AT4G10330.1 (glycine-rich protein )

HSP 1 Score: 134.8 bits (338), Expect = 7.8e-32
Identity = 63/94 (67.02%), Postives = 75/94 (79.79%), Query Frame = 0 

Query: 8   NRQEGGEDENGVIWKLPVLKSSRIGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQL 67
           NR+  G+D+ G++WKLP ++   IGK+GPAFGLGVGCG GFG GL+GG GFGPG+PGLQ 
Sbjct: 3   NRRRTGDDDKGLLWKLPQVRIRDIGKVGPAFGLGVGCGFGFGAGLIGGVGFGPGVPGLQF 62

Query: 68  GFGLGAGCGVGLGFGYGVGRGIAQDDKRRYSNVG 102
           G G GAGCG+G+GFGYGVGRG A D  R Y NVG
Sbjct: 63  GLGFGAGCGIGVGFGYGVGRGAAYDHSRSYYNVG 96

[Close]
BLAST of Lag0039319 vs. TAIR 10
Match: AT1G66820.1 (glycine-rich protein )

HSP 1 Score: 55.1 bits (131), Expect = 7.8e-08
Identity = 36/70 (51.43%), Postives = 43/70 (61.43%), Query Frame = 0 

Query: 34  LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQ-----LGFGLGAGCGVGLGFGYGVGRG 93
           +GP  G G+GCG G GIGL GG G G    GL      LGFG+G G G G G+G+GVG G
Sbjct: 39  VGPGIGGGIGCGAGIGIGLSGGLGIGAS-EGLDHSNVVLGFGIGCGIGFGFGYGFGVGGG 98

Query: 94  IAQDD-KRRY 98
            + DD K R+
Sbjct: 99  YSFDDIKERF 107

[Close]
BLAST of Lag0039319 vs. TAIR 10
Match: AT4G14301.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23450.1); Has 101 Blast hits to 93 proteins in 34 species: Archae - 0; Bacteria - 27; Metazoa - 16; Fungi - 5; Plants - 34; Viruses - 3; Other Eukaryotes - 16 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 8.9e-04
Identity = 32/58 (55.17%), Postives = 36/58 (62.07%), Query Frame = 0 

Query: 31  IGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGVGLGFGYGVGRG 89
           IGK G  FG G+G G GFG G+  G GFG GI G   G G G G G G GFG G+G+G
Sbjct: 53  IGKGGGIFGHGIGKGGGFGGGISKGGGFGGGI-GKGGGIGGGIGKGKGWGFGGGIGKG 109

The following BLAST results are available for this feature:
BLAST of Lag0039319 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038889093.12.8e-5292.92ctenidin-1 isoform X1 [Benincasa hispida][more]
XP_038889094.12.8e-5292.92glycine-rich cell wall structural protein 1 isoform X2 [Benincasa hispida][more]
XP_022974026.16.3e-5290.52keratin, type II cytoskeletal 3 isoform X2 [Cucurbita maxima][more]
XP_023521209.18.3e-5290.52fibroin heavy chain isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022932820.18.3e-5290.52keratin, type II cytoskeletal 2 epidermal isoform X2 [Cucurbita moschata][more]
BLAST of Lag0039319 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0039319 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IA953.1e-5290.52keratin, type II cytoskeletal 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1F3604.0e-5290.52keratin, type II cytoskeletal 2 epidermal isoform X2 OS=Cucurbita moschata OX=36... [more]
A0A6J1ICW23.4e-5191.96keratin, type II cytoskeletal 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1EY314.4e-5191.96keratin, type II cytoskeletal 2 epidermal isoform X1 OS=Cucurbita moschata OX=36... [more]
A0A1S4E3478.4e-5090.18glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103498... [more]
BLAST of Lag0039319 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G10330.17.8e-3267.02glycine-rich protein [more]
AT1G66820.17.8e-0851.43glycine-rich protein [more]
AT4G14301.18.9e-0455.17unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34201:SF1GLYCINE-RICH PROTEINcoord: 5..111
NoneNo IPR availablePANTHERPTHR34201GLYCINE-RICH PROTEINcoord: 5..111

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0039319.1Lag0039319.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane