
Lag0039312 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAAGGAGTTCTTAACCTTGATGCAAGGAGAAAAGTCAGGAGAAAAGTCAGGAGAAAAGTCAGTAGAACAGTACGAACTGGAATTCACCCGATTATCCCGTTTCTCCCCTGAAATGGTGGATACGGAAGCAAAGAAGACAAAGAGGTTCATCTCGGGCCTCAAAGATGACGTCCAGAAGGTTGTTGGAGCCCTTGGCCCAACGGACTACGCAACGGCCCTTCGAGCGACCACCTTTATGGGCATGCCAACAGTCAATACAACTCCAGTAGCCAAGGAGTCGGAGCCCGACGCAGGACAGAAGAGGAAACACGAGTAG ATGGAGAAGGAGTTCTTAACCTTGATGCAAGGAGAAAAGTCAGGAGAAAAGTCAGGAGAAAAGTCAGTAGAACAGTACGAACTGGAATTCACCCGATTATCCCGTTTCTCCCCTGAAATGGTGGATACGGAAGCAAAGAAGACAAAGAGGTTCATCTCGGGCCTCAAAGATGACGTCCAGAAGGTTGTTGGAGCCCTTGGCCCAACGGACTACGCAACGGCCCTTCGAGCGACCACCTTTATGGGCATGCCAACAGTCAATACAACTCCAGTAGCCAAGGAGTCGGAGCCCGACGCAGGACAGAAGAGGAAACACGAGTAG ATGGAGAAGGAGTTCTTAACCTTGATGCAAGGAGAAAAGTCAGGAGAAAAGTCAGGAGAAAAGTCAGTAGAACAGTACGAACTGGAATTCACCCGATTATCCCGTTTCTCCCCTGAAATGGTGGATACGGAAGCAAAGAAGACAAAGAGGTTCATCTCGGGCCTCAAAGATGACGTCCAGAAGGTTGTTGGAGCCCTTGGCCCAACGGACTACGCAACGGCCCTTCGAGCGACCACCTTTATGGGCATGCCAACAGTCAATACAACTCCAGTAGCCAAGGAGTCGGAGCCCGACGCAGGACAGAAGAGGAAACACGAGTAG MEKEFLTLMQGEKSGEKSGEKSVEQYELEFTRLSRFSPEMVDTEAKKTKRFISGLKDDVQKVVGALGPTDYATALRATTFMGMPTVNTTPVAKESEPDAGQKRKHE Homology
BLAST of Lag0039312 vs. NCBI nr
Match: XP_038880159.1 (uncharacterized protein LOC120071839 [Benincasa hispida]) HSP 1 Score: 83.2 bits (204), Expect = 1.5e-12 Identity = 46/97 (47.42%), Postives = 64/97 (65.98%), Query Frame = 0
BLAST of Lag0039312 vs. NCBI nr
Match: XP_022156662.1 (uncharacterized protein LOC111023512 [Momordica charantia]) HSP 1 Score: 72.4 bits (176), Expect = 2.6e-09 Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0
BLAST of Lag0039312 vs. NCBI nr
Match: KAA0062178.1 (gag protease polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 71.2 bits (173), Expect = 5.9e-09 Identity = 41/85 (48.24%), Postives = 53/85 (62.35%), Query Frame = 0
BLAST of Lag0039312 vs. NCBI nr
Match: KAG6579028.1 (hypothetical protein SDJN03_23476, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 70.9 bits (172), Expect = 7.7e-09 Identity = 46/106 (43.40%), Postives = 60/106 (56.60%), Query Frame = 0
BLAST of Lag0039312 vs. NCBI nr
Match: XP_023550797.1 (uncharacterized protein LOC111808829 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 70.9 bits (172), Expect = 7.7e-09 Identity = 46/106 (43.40%), Postives = 60/106 (56.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|