Lag0039310 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAACAGGATCTTATGCCCATTCATCAACAAAAGTTTCATCTAATAATTCTGAAGATGGAACTAAAGTTGAAAGTGATGCTCCTATAAATAGTGAGGGTTATGGTCAAAGTAGCATGAGCAAGATGTCTAGAAGAAAAAGAGGAGCATTAAGCGAGACTATGTCATCTTTTATAGATGCTTATGTAGAAAATTCAAAGAGAAGAAATGACATACCTGAGAAACGAATTCTTGGTTCGTCATCAGGTGATGTTAGTGAGAGTTCATCAAAATCAAAAGATTGTATTGATGAAGAATTGGACAAATGCTTAGAAATTTTAAATAACATGGAGGATATTGATGAAAAAAAACTTATACCAAAATATTGAAACGTTTGCTCGAGGACAAATTTTGGAGACAAGCATTTCTGCATATTCCTGAATCAAGGAGGAGAGGATTTATCAATTATCTTTGACTCAAATTATATCATTTGTTGGTTCATAATATTTTGTGTAAGGAAAAACTTTTAGTTTGTTAATGTTGACTGGTTGATACGATGTTGGTTCATTATATTTTGTGTAAGAAAACATATTTGGTTTGTTACATTGATTAATTGATATGTTGTTGGTTGATTATATTTTGTGCTAGAAAGATATATGGTTTTTTTTTACTAGTAGTTTATGTGATTTGAACATGATTAAAGCAGGTATCAATTATGGATTTACATCCCAATTGTTCTGAAATTCACTTACTTTCTAATAATGATGTGCTAGACTTGCTTGAAAAAGACGAATACGAGGATGAAGATCTCTTGATGTTTTTTTGTCTATTAAGGGAAGAGTTGCATAAAGCACAAATGATTAGACAACCATGCAGAACTTCTACACTCAGAGGTCATGATTATGTGGTTGAATTGTTAAATGCTAACGATACAAGATGCTTTGATTGTTTTAGGATGAAAAGAAATGAATTTGTAGTGTTCTGTGAAGAGTTGAAAAACACCACTAATCTAAAATCTTCTCGATATTTGACTGTACAAGAACAAGTGGCTATATTCTTGCTCACTATATCACACAATGAGTGGAATCGTCTCGTAGCAGAAAGAGTCCAACATTCTAGTCAGACAATCTCATGGTATTTTAATCATGTACTAAAGAAAGTTTGCCAACTTGGAACCAAGATTATTTCTCCATTAGAACTTGACAATGTCCCTCCAGAGATTATGTTCAAATCTAAATACTACCCTTTCTTTAAGGTAATTTTCTTGACTGATTATTATTTTATAAGTTGTTTTAATGAAAATTAGTTTGAAATATATACTTTTATTGAATAGGATTGTGTTGGTGCAATTGATGGAACTCACATTAACGCATGTATTCCACAACATGAGCAAATTCCATATCGTGGTAGGAAAACTATTCCGAATGGTTCAACTAAGTCAATCATTATGCCAAGTCAGTATTCTTCCAAAGATGTAGAAGTTGAAGAAATATTCATGCCTAAAAGAGACATGTACATGAGATTGTCTGTGATAGCAATAAGAAAAAACTTCGAGTTTAGGGTTAACAAATCGAAGAAAAATATGTTAGTCGCTTACTGTGTAACTAGGGGATGTAAATGGAAGGTTCGAGTAATGACTTTGAAGGGGTGTGATATATATAAGATCACAAATTGTAATATTCATACATACTAACATGAAATGTTGACTCACGATCATAGACAGGCAAAGAGTTGTGTTATTGAAAATTTGATCAAGACGAAGTTTGAAGATGTTGGTCGTACTTATAGGCCAAAACATATTATGAACGATATTCAACAAGACTTCGGTGTAAACTTAAGTTATGACAAGGCTTGGCGGGCAAGGGAAGAAACTTTTATTCTTGCTAAAGGATCTCCAGAAGAATCATACAGACTGTTACCGAGGTTTGGTGAAGCATTAAAAATCAAAAATCCGGATACAGTGTTTGACCTAGAACATAAAGACAATGGACATTTTAAGCACGTGTTTATGGCACTAGGTGCTTCTACTGGAGGGTTCAAGAGTTCTATTCGTTTAGTACTAGTGGTTGATGAAACTCACTTACGGGAAAAGTTCTGTGGGAAGCTCCTTCTTGCGGCAGGTGCTGATGGCAACAACCAAATATATCCTATAAATTCGGCCTTTGCCAATGGAGAAACTGGTTGA ATGACAACAGGATCTTATGCCCATTCATCAACAAAAGTTTCATCTAATAATTCTGAAGATGGAACTAAAGTTGAAAGTGATGCTCCTATAAATAGTGAGGGTTATGGTCAAAGTAGCATGAGCAAGATGTCTAGAAGAAAAAGAGGAGCATTAAGCGAGACTATGTCATCTTTTATAGATGCTTATGTAGAAAATTCAAAGAGAAGAAATGACATACCTGAGAAACGAATTCTTGGTTCGTCATCAGACTTGCTTGAAAAAGACGAATACGAGGATGAAGATCTCTTGATGTTTTTTTGTCTATTAAGGGAAGAGTTGCATAAAGCACAAATGATTAGACAACCATGCAGAACTTCTACACTCAGAGGTCATGATTATGTGGTTGAATTGTTAAATGCTAACGATACAAGATGCTTTGATTGTTTTAGGATGAAAAGAAATGAATTTGTAGTGTTCTGTGAAGAGTTGAAAAACACCACTAATCTAAAATCTTCTCGATATTTGACTGTACAAGAACAAGTGGCTATATTCTTGCTCACTATATCACACAATGAGTGGAATCGTCTCGTAGCAGAAAGAGTCCAACATTCTAGTCAGACAATCTCATGGTATTTTAATCATGTACTAAAGAAAGTTTGCCAACTTGGAACCAAGATTATTTCTCCATTAGAACTTGACAATGTCCCTCCAGAGATTATGTTCAAATCTAAATACTACCCTTTCTTTAAGGATTGTGTTGGTGCAATTGATGGAACTCACATTAACGCATGTATTCCACAACATGAGCAAATTCCATATCGTGGTAGGAAAACTATTCCGAATGGTTCAACTAAGTCAATCATTATGCCAAGTCAGTATTCTTCCAAAGATGTAGAAGTTGAAGAAATATTCATGCCTAAAAGAGACATGTACATGAGATTGTCTGTGATAGCAATAAGAAAAAACTTCGAGTTTAGGGTTAACAAATCGAAGAAAAATATGTTAGTCGCTTACTGTGTAACTAGGGGATGTAAATGGAAGGCAAAGAGTTGTGTTATTGAAAATTTGATCAAGACGAAGTTTGAAGATGTTGGTCGTACTTATAGGCCAAAACATATTATGAACGATATTCAACAAGACTTCGGTGTAAACTTAAGTTATGACAAGGCTTGGCGGGCAAGGGAAGAAACTTTTATTCTTGCTAAAGGATCTCCAGAAGAATCATACAGACTGTTACCGAGGTTTGGTGAAGCATTAAAAATCAAAAATCCGGATACAGTGTTTGACCTAGAACATAAAGACAATGGACATTTTAAGCACGTGTTTATGGCACTAGGTGCTTCTACTGGAGGGTTCAAGAGTTCTATTCGTTTAGTACTAGTGGTTGATGAAACTCACTTACGGGAAAAGTTCTGTGGGAAGCTCCTTCTTGCGGCAGGTGCTGATGGCAACAACCAAATATATCCTATAAATTCGGCCTTTGCCAATGGAGAAACTGGTTGA ATGACAACAGGATCTTATGCCCATTCATCAACAAAAGTTTCATCTAATAATTCTGAAGATGGAACTAAAGTTGAAAGTGATGCTCCTATAAATAGTGAGGGTTATGGTCAAAGTAGCATGAGCAAGATGTCTAGAAGAAAAAGAGGAGCATTAAGCGAGACTATGTCATCTTTTATAGATGCTTATGTAGAAAATTCAAAGAGAAGAAATGACATACCTGAGAAACGAATTCTTGGTTCGTCATCAGACTTGCTTGAAAAAGACGAATACGAGGATGAAGATCTCTTGATGTTTTTTTGTCTATTAAGGGAAGAGTTGCATAAAGCACAAATGATTAGACAACCATGCAGAACTTCTACACTCAGAGGTCATGATTATGTGGTTGAATTGTTAAATGCTAACGATACAAGATGCTTTGATTGTTTTAGGATGAAAAGAAATGAATTTGTAGTGTTCTGTGAAGAGTTGAAAAACACCACTAATCTAAAATCTTCTCGATATTTGACTGTACAAGAACAAGTGGCTATATTCTTGCTCACTATATCACACAATGAGTGGAATCGTCTCGTAGCAGAAAGAGTCCAACATTCTAGTCAGACAATCTCATGGTATTTTAATCATGTACTAAAGAAAGTTTGCCAACTTGGAACCAAGATTATTTCTCCATTAGAACTTGACAATGTCCCTCCAGAGATTATGTTCAAATCTAAATACTACCCTTTCTTTAAGGATTGTGTTGGTGCAATTGATGGAACTCACATTAACGCATGTATTCCACAACATGAGCAAATTCCATATCGTGGTAGGAAAACTATTCCGAATGGTTCAACTAAGTCAATCATTATGCCAAGTCAGTATTCTTCCAAAGATGTAGAAGTTGAAGAAATATTCATGCCTAAAAGAGACATGTACATGAGATTGTCTGTGATAGCAATAAGAAAAAACTTCGAGTTTAGGGTTAACAAATCGAAGAAAAATATGTTAGTCGCTTACTGTGTAACTAGGGGATGTAAATGGAAGGCAAAGAGTTGTGTTATTGAAAATTTGATCAAGACGAAGTTTGAAGATGTTGGTCGTACTTATAGGCCAAAACATATTATGAACGATATTCAACAAGACTTCGGTGTAAACTTAAGTTATGACAAGGCTTGGCGGGCAAGGGAAGAAACTTTTATTCTTGCTAAAGGATCTCCAGAAGAATCATACAGACTGTTACCGAGGTTTGGTGAAGCATTAAAAATCAAAAATCCGGATACAGTGTTTGACCTAGAACATAAAGACAATGGACATTTTAAGCACGTGTTTATGGCACTAGGTGCTTCTACTGGAGGGTTCAAGAGTTCTATTCGTTTAGTACTAGTGGTTGATGAAACTCACTTACGGGAAAAGTTCTGTGGGAAGCTCCTTCTTGCGGCAGGTGCTGATGGCAACAACCAAATATATCCTATAAATTCGGCCTTTGCCAATGGAGAAACTGGTTGA MTTGSYAHSSTKVSSNNSEDGTKVESDAPINSEGYGQSSMSKMSRRKRGALSETMSSFIDAYVENSKRRNDIPEKRILGSSSDLLEKDEYEDEDLLMFFCLLREELHKAQMIRQPCRTSTLRGHDYVVELLNANDTRCFDCFRMKRNEFVVFCEELKNTTNLKSSRYLTVQEQVAIFLLTISHNEWNRLVAERVQHSSQTISWYFNHVLKKVCQLGTKIISPLELDNVPPEIMFKSKYYPFFKDCVGAIDGTHINACIPQHEQIPYRGRKTIPNGSTKSIIMPSQYSSKDVEVEEIFMPKRDMYMRLSVIAIRKNFEFRVNKSKKNMLVAYCVTRGCKWKAKSCVIENLIKTKFEDVGRTYRPKHIMNDIQQDFGVNLSYDKAWRAREETFILAKGSPEESYRLLPRFGEALKIKNPDTVFDLEHKDNGHFKHVFMALGASTGGFKSSIRLVLVVDETHLREKFCGKLLLAAGADGNNQIYPINSAFANGETG Homology
BLAST of Lag0039310 vs. NCBI nr
Match: KAF3433792.1 (hypothetical protein FNV43_RR24895 [Rhamnella rubrinervis]) HSP 1 Score: 262.3 bits (669), Expect = 8.4e-66 Identity = 151/341 (44.28%), Postives = 202/341 (59.24%), Query Frame = 0
BLAST of Lag0039310 vs. NCBI nr
Match: KAF7148819.1 (hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii]) HSP 1 Score: 229.6 bits (584), Expect = 6.0e-56 Identity = 140/352 (39.77%), Postives = 183/352 (51.99%), Query Frame = 0
BLAST of Lag0039310 vs. NCBI nr
Match: KAF7123090.1 (hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii]) HSP 1 Score: 227.3 bits (578), Expect = 3.0e-55 Identity = 138/351 (39.32%), Postives = 183/351 (52.14%), Query Frame = 0
BLAST of Lag0039310 vs. NCBI nr
Match: KAG8371481.1 (hypothetical protein BUALT_Bualt13G0092200 [Buddleja alternifolia]) HSP 1 Score: 217.6 bits (553), Expect = 2.4e-52 Identity = 104/193 (53.89%), Postives = 134/193 (69.43%), Query Frame = 0
BLAST of Lag0039310 vs. NCBI nr
Match: KAG8372299.1 (hypothetical protein BUALT_Bualt12G0051800 [Buddleja alternifolia]) HSP 1 Score: 216.9 bits (551), Expect = 4.0e-52 Identity = 104/195 (53.33%), Postives = 137/195 (70.26%), Query Frame = 0
BLAST of Lag0039310 vs. ExPASy TrEMBL
Match: A0A6J1DJT1 (uncharacterized protein LOC111020715 OS=Momordica charantia OX=3673 GN=LOC111020715 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 1.8e-50 Identity = 107/239 (44.77%), Postives = 146/239 (61.09%), Query Frame = 0
BLAST of Lag0039310 vs. ExPASy TrEMBL
Match: A0A5A7VNP6 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001920 PE=4 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 1.3e-48 Identity = 103/240 (42.92%), Postives = 149/240 (62.08%), Query Frame = 0
BLAST of Lag0039310 vs. ExPASy TrEMBL
Match: A0A5A7U1P5 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00140 PE=4 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 1.3e-48 Identity = 104/240 (43.33%), Postives = 149/240 (62.08%), Query Frame = 0
BLAST of Lag0039310 vs. ExPASy TrEMBL
Match: A0A6J1D234 (uncharacterized protein LOC111016888 OS=Momordica charantia OX=3673 GN=LOC111016888 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 2.2e-48 Identity = 109/254 (42.91%), Postives = 149/254 (58.66%), Query Frame = 0
BLAST of Lag0039310 vs. ExPASy TrEMBL
Match: A0A2I7YUI4 (MuDRA-like transposase OS=Cucumis sativus OX=3659 PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 3.8e-48 Identity = 109/279 (39.07%), Postives = 160/279 (57.35%), Query Frame = 0
BLAST of Lag0039310 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 90.9 bits (224), Expect = 3.1e-18 Identity = 52/161 (32.30%), Postives = 81/161 (50.31%), Query Frame = 0
BLAST of Lag0039310 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 68.2 bits (165), Expect = 2.2e-11 Identity = 41/145 (28.28%), Postives = 64/145 (44.14%), Query Frame = 0
BLAST of Lag0039310 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.5 bits (158), Expect = 1.4e-10 Identity = 38/124 (30.65%), Postives = 62/124 (50.00%), Query Frame = 0
BLAST of Lag0039310 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 51.6 bits (122), Expect = 2.1e-06 Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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