Lag0039310 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0039310
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionMuDRA-like transposase
Locationchr2: 41110059 .. 41112223 (+)
RNA-Seq ExpressionLag0039310
SyntenyLag0039310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAACAGGATCTTATGCCCATTCATCAACAAAAGTTTCATCTAATAATTCTGAAGATGGAACTAAAGTTGAAAGTGATGCTCCTATAAATAGTGAGGGTTATGGTCAAAGTAGCATGAGCAAGATGTCTAGAAGAAAAAGAGGAGCATTAAGCGAGACTATGTCATCTTTTATAGATGCTTATGTAGAAAATTCAAAGAGAAGAAATGACATACCTGAGAAACGAATTCTTGGTTCGTCATCAGGTGATGTTAGTGAGAGTTCATCAAAATCAAAAGATTGTATTGATGAAGAATTGGACAAATGCTTAGAAATTTTAAATAACATGGAGGATATTGATGAAAAAAAACTTATACCAAAATATTGAAACGTTTGCTCGAGGACAAATTTTGGAGACAAGCATTTCTGCATATTCCTGAATCAAGGAGGAGAGGATTTATCAATTATCTTTGACTCAAATTATATCATTTGTTGGTTCATAATATTTTGTGTAAGGAAAAACTTTTAGTTTGTTAATGTTGACTGGTTGATACGATGTTGGTTCATTATATTTTGTGTAAGAAAACATATTTGGTTTGTTACATTGATTAATTGATATGTTGTTGGTTGATTATATTTTGTGCTAGAAAGATATATGGTTTTTTTTTACTAGTAGTTTATGTGATTTGAACATGATTAAAGCAGGTATCAATTATGGATTTACATCCCAATTGTTCTGAAATTCACTTACTTTCTAATAATGATGTGCTAGACTTGCTTGAAAAAGACGAATACGAGGATGAAGATCTCTTGATGTTTTTTTGTCTATTAAGGGAAGAGTTGCATAAAGCACAAATGATTAGACAACCATGCAGAACTTCTACACTCAGAGGTCATGATTATGTGGTTGAATTGTTAAATGCTAACGATACAAGATGCTTTGATTGTTTTAGGATGAAAAGAAATGAATTTGTAGTGTTCTGTGAAGAGTTGAAAAACACCACTAATCTAAAATCTTCTCGATATTTGACTGTACAAGAACAAGTGGCTATATTCTTGCTCACTATATCACACAATGAGTGGAATCGTCTCGTAGCAGAAAGAGTCCAACATTCTAGTCAGACAATCTCATGGTATTTTAATCATGTACTAAAGAAAGTTTGCCAACTTGGAACCAAGATTATTTCTCCATTAGAACTTGACAATGTCCCTCCAGAGATTATGTTCAAATCTAAATACTACCCTTTCTTTAAGGTAATTTTCTTGACTGATTATTATTTTATAAGTTGTTTTAATGAAAATTAGTTTGAAATATATACTTTTATTGAATAGGATTGTGTTGGTGCAATTGATGGAACTCACATTAACGCATGTATTCCACAACATGAGCAAATTCCATATCGTGGTAGGAAAACTATTCCGAATGGTTCAACTAAGTCAATCATTATGCCAAGTCAGTATTCTTCCAAAGATGTAGAAGTTGAAGAAATATTCATGCCTAAAAGAGACATGTACATGAGATTGTCTGTGATAGCAATAAGAAAAAACTTCGAGTTTAGGGTTAACAAATCGAAGAAAAATATGTTAGTCGCTTACTGTGTAACTAGGGGATGTAAATGGAAGGTTCGAGTAATGACTTTGAAGGGGTGTGATATATATAAGATCACAAATTGTAATATTCATACATACTAACATGAAATGTTGACTCACGATCATAGACAGGCAAAGAGTTGTGTTATTGAAAATTTGATCAAGACGAAGTTTGAAGATGTTGGTCGTACTTATAGGCCAAAACATATTATGAACGATATTCAACAAGACTTCGGTGTAAACTTAAGTTATGACAAGGCTTGGCGGGCAAGGGAAGAAACTTTTATTCTTGCTAAAGGATCTCCAGAAGAATCATACAGACTGTTACCGAGGTTTGGTGAAGCATTAAAAATCAAAAATCCGGATACAGTGTTTGACCTAGAACATAAAGACAATGGACATTTTAAGCACGTGTTTATGGCACTAGGTGCTTCTACTGGAGGGTTCAAGAGTTCTATTCGTTTAGTACTAGTGGTTGATGAAACTCACTTACGGGAAAAGTTCTGTGGGAAGCTCCTTCTTGCGGCAGGTGCTGATGGCAACAACCAAATATATCCTATAAATTCGGCCTTTGCCAATGGAGAAACTGGTTGA

mRNA sequence

ATGACAACAGGATCTTATGCCCATTCATCAACAAAAGTTTCATCTAATAATTCTGAAGATGGAACTAAAGTTGAAAGTGATGCTCCTATAAATAGTGAGGGTTATGGTCAAAGTAGCATGAGCAAGATGTCTAGAAGAAAAAGAGGAGCATTAAGCGAGACTATGTCATCTTTTATAGATGCTTATGTAGAAAATTCAAAGAGAAGAAATGACATACCTGAGAAACGAATTCTTGGTTCGTCATCAGACTTGCTTGAAAAAGACGAATACGAGGATGAAGATCTCTTGATGTTTTTTTGTCTATTAAGGGAAGAGTTGCATAAAGCACAAATGATTAGACAACCATGCAGAACTTCTACACTCAGAGGTCATGATTATGTGGTTGAATTGTTAAATGCTAACGATACAAGATGCTTTGATTGTTTTAGGATGAAAAGAAATGAATTTGTAGTGTTCTGTGAAGAGTTGAAAAACACCACTAATCTAAAATCTTCTCGATATTTGACTGTACAAGAACAAGTGGCTATATTCTTGCTCACTATATCACACAATGAGTGGAATCGTCTCGTAGCAGAAAGAGTCCAACATTCTAGTCAGACAATCTCATGGTATTTTAATCATGTACTAAAGAAAGTTTGCCAACTTGGAACCAAGATTATTTCTCCATTAGAACTTGACAATGTCCCTCCAGAGATTATGTTCAAATCTAAATACTACCCTTTCTTTAAGGATTGTGTTGGTGCAATTGATGGAACTCACATTAACGCATGTATTCCACAACATGAGCAAATTCCATATCGTGGTAGGAAAACTATTCCGAATGGTTCAACTAAGTCAATCATTATGCCAAGTCAGTATTCTTCCAAAGATGTAGAAGTTGAAGAAATATTCATGCCTAAAAGAGACATGTACATGAGATTGTCTGTGATAGCAATAAGAAAAAACTTCGAGTTTAGGGTTAACAAATCGAAGAAAAATATGTTAGTCGCTTACTGTGTAACTAGGGGATGTAAATGGAAGGCAAAGAGTTGTGTTATTGAAAATTTGATCAAGACGAAGTTTGAAGATGTTGGTCGTACTTATAGGCCAAAACATATTATGAACGATATTCAACAAGACTTCGGTGTAAACTTAAGTTATGACAAGGCTTGGCGGGCAAGGGAAGAAACTTTTATTCTTGCTAAAGGATCTCCAGAAGAATCATACAGACTGTTACCGAGGTTTGGTGAAGCATTAAAAATCAAAAATCCGGATACAGTGTTTGACCTAGAACATAAAGACAATGGACATTTTAAGCACGTGTTTATGGCACTAGGTGCTTCTACTGGAGGGTTCAAGAGTTCTATTCGTTTAGTACTAGTGGTTGATGAAACTCACTTACGGGAAAAGTTCTGTGGGAAGCTCCTTCTTGCGGCAGGTGCTGATGGCAACAACCAAATATATCCTATAAATTCGGCCTTTGCCAATGGAGAAACTGGTTGA

Coding sequence (CDS)

ATGACAACAGGATCTTATGCCCATTCATCAACAAAAGTTTCATCTAATAATTCTGAAGATGGAACTAAAGTTGAAAGTGATGCTCCTATAAATAGTGAGGGTTATGGTCAAAGTAGCATGAGCAAGATGTCTAGAAGAAAAAGAGGAGCATTAAGCGAGACTATGTCATCTTTTATAGATGCTTATGTAGAAAATTCAAAGAGAAGAAATGACATACCTGAGAAACGAATTCTTGGTTCGTCATCAGACTTGCTTGAAAAAGACGAATACGAGGATGAAGATCTCTTGATGTTTTTTTGTCTATTAAGGGAAGAGTTGCATAAAGCACAAATGATTAGACAACCATGCAGAACTTCTACACTCAGAGGTCATGATTATGTGGTTGAATTGTTAAATGCTAACGATACAAGATGCTTTGATTGTTTTAGGATGAAAAGAAATGAATTTGTAGTGTTCTGTGAAGAGTTGAAAAACACCACTAATCTAAAATCTTCTCGATATTTGACTGTACAAGAACAAGTGGCTATATTCTTGCTCACTATATCACACAATGAGTGGAATCGTCTCGTAGCAGAAAGAGTCCAACATTCTAGTCAGACAATCTCATGGTATTTTAATCATGTACTAAAGAAAGTTTGCCAACTTGGAACCAAGATTATTTCTCCATTAGAACTTGACAATGTCCCTCCAGAGATTATGTTCAAATCTAAATACTACCCTTTCTTTAAGGATTGTGTTGGTGCAATTGATGGAACTCACATTAACGCATGTATTCCACAACATGAGCAAATTCCATATCGTGGTAGGAAAACTATTCCGAATGGTTCAACTAAGTCAATCATTATGCCAAGTCAGTATTCTTCCAAAGATGTAGAAGTTGAAGAAATATTCATGCCTAAAAGAGACATGTACATGAGATTGTCTGTGATAGCAATAAGAAAAAACTTCGAGTTTAGGGTTAACAAATCGAAGAAAAATATGTTAGTCGCTTACTGTGTAACTAGGGGATGTAAATGGAAGGCAAAGAGTTGTGTTATTGAAAATTTGATCAAGACGAAGTTTGAAGATGTTGGTCGTACTTATAGGCCAAAACATATTATGAACGATATTCAACAAGACTTCGGTGTAAACTTAAGTTATGACAAGGCTTGGCGGGCAAGGGAAGAAACTTTTATTCTTGCTAAAGGATCTCCAGAAGAATCATACAGACTGTTACCGAGGTTTGGTGAAGCATTAAAAATCAAAAATCCGGATACAGTGTTTGACCTAGAACATAAAGACAATGGACATTTTAAGCACGTGTTTATGGCACTAGGTGCTTCTACTGGAGGGTTCAAGAGTTCTATTCGTTTAGTACTAGTGGTTGATGAAACTCACTTACGGGAAAAGTTCTGTGGGAAGCTCCTTCTTGCGGCAGGTGCTGATGGCAACAACCAAATATATCCTATAAATTCGGCCTTTGCCAATGGAGAAACTGGTTGA

Protein sequence

MTTGSYAHSSTKVSSNNSEDGTKVESDAPINSEGYGQSSMSKMSRRKRGALSETMSSFIDAYVENSKRRNDIPEKRILGSSSDLLEKDEYEDEDLLMFFCLLREELHKAQMIRQPCRTSTLRGHDYVVELLNANDTRCFDCFRMKRNEFVVFCEELKNTTNLKSSRYLTVQEQVAIFLLTISHNEWNRLVAERVQHSSQTISWYFNHVLKKVCQLGTKIISPLELDNVPPEIMFKSKYYPFFKDCVGAIDGTHINACIPQHEQIPYRGRKTIPNGSTKSIIMPSQYSSKDVEVEEIFMPKRDMYMRLSVIAIRKNFEFRVNKSKKNMLVAYCVTRGCKWKAKSCVIENLIKTKFEDVGRTYRPKHIMNDIQQDFGVNLSYDKAWRAREETFILAKGSPEESYRLLPRFGEALKIKNPDTVFDLEHKDNGHFKHVFMALGASTGGFKSSIRLVLVVDETHLREKFCGKLLLAAGADGNNQIYPINSAFANGETG
Homology
BLAST of Lag0039310 vs. NCBI nr
Match: KAF3433792.1 (hypothetical protein FNV43_RR24895 [Rhamnella rubrinervis])

HSP 1 Score: 262.3 bits (669), Expect = 8.4e-66
Identity = 151/341 (44.28%), Postives = 202/341 (59.24%), Query Frame = 0

Query: 1   MTTGSYAHSSTKVSSNNSE-----------DGTKVESDAPINSEGYGQSS-MSKMSRRKR 60
           M TG ++  ST++ S++ +           DG + +SD    SEG   SS  S+ +RRKR
Sbjct: 383 MATGEFSCPSTRIPSDSEDGNTINEMNVDGDGQEDKSDGMDKSEGNKNSSTSSRGTRRKR 442

Query: 61  GALSETMSSFIDAYVENSKRRNDIPEKRILGSSS--------------------DLLE-- 120
             +S  + SFI+ Y E++++RN+I E ++  SSS                    DLL   
Sbjct: 443 ENISGALISFINVYAESARKRNEILEHKVASSSSATSSTNDDGAVPSKRNDEDEDLLNQC 502

Query: 121 --------------------------------------KDEYEDEDLLMFFCLLREELHK 180
                                                 +D+ +DE + +F  L+  E  +
Sbjct: 503 FEILNTMDEIDGDSYSKAIKLLHDDVYMDLGDVDLSLFEDDDDDELIFIFLYLVCNEYAQ 562

Query: 181 AQMIRQPCRTSTLRGHDYVVELLNANDTRCFDCFRMKRNEFVVFCEELKNTTNLKSSRYL 240
              +RQPCRTS LRGHDYV+ELLN +++RC+DCFRM ++ F+ FCEELK+ TNLK+SR++
Sbjct: 563 IDSLRQPCRTSLLRGHDYVLELLNGHESRCYDCFRMDKSVFITFCEELKSKTNLKNSRFV 622

Query: 241 TVQEQVAIFLLTISHNEWNRLVAERVQHSSQTISWYFNHVLKKVCQLGTKIISPLELDNV 270
           TVQEQVAIFLLTI HNE NRLVAER QHS +TIS YFNHVLKKVC LG ++I     D V
Sbjct: 623 TVQEQVAIFLLTICHNERNRLVAERFQHSGETISRYFNHVLKKVCMLGVELICHSNSDVV 682

BLAST of Lag0039310 vs. NCBI nr
Match: KAF7148819.1 (hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii])

HSP 1 Score: 229.6 bits (584), Expect = 6.0e-56
Identity = 140/352 (39.77%), Postives = 183/352 (51.99%), Query Frame = 0

Query: 3   TGSYAHSSTKV-SSNNSEDGTKVESDAPINSEGYGQSSMSKMSRRKRGALSETMSSFIDA 62
           TG++AH S KV SS++S D      D P      G  +  K  ++KR + +  +SS +  
Sbjct: 461 TGAHAHPSNKVPSSSDSSDPEFQFKDEPEVESAEGSKAKPKAKKKKRDSFAANISSALSQ 520

Query: 63  YVENSKRRNDIPEKR----------------------------------ILGSSSDL--- 122
           + ENSKRR D+ E++                                  +L +  DL   
Sbjct: 521 FAENSKRRVDVMERKLHCSNPGCSVVSGSMSIGEVGIGPLAAGMKECQALLNTMDDLDED 580

Query: 123 -----LEK---------------------------------------DEYEDEDLLMFFC 182
                LEK                                       D+ EDE++++   
Sbjct: 581 SYNKVLEKLHGDILWRQMFMDMPEKRRIAWIKKFNFCNMDPICDHSDDDSEDEEVVVLLS 640

Query: 183 LLREELHKAQMIRQPCRTSTLRGHDYVVELLNANDTRCFDCFRMKRNEFVVFCEELKNTT 242
           L   E +   +  +PCRTS LRGHDYVVE+LN ++ RC   FRMK   F+ FCE LK   
Sbjct: 641 LALYEYYNMYIDHRPCRTSILRGHDYVVEVLNGHEDRCHQNFRMKPQVFIAFCEALKLHA 700

Query: 243 NLKSSRYLTVQEQVAIFLLTISHNEWNRLVAERVQHSSQTISWYFNHVLKKVCQLGTKII 273
           NLK SRYLT+QEQV IFLLTI HNE NR+V ER QHS  TIS YF+ VLK VC+LG  II
Sbjct: 701 NLKHSRYLTLQEQVCIFLLTIGHNERNRVVQERFQHSGHTISIYFHRVLKAVCKLGVVII 760

BLAST of Lag0039310 vs. NCBI nr
Match: KAF7123090.1 (hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii])

HSP 1 Score: 227.3 bits (578), Expect = 3.0e-55
Identity = 138/351 (39.32%), Postives = 183/351 (52.14%), Query Frame = 0

Query: 3   TGSYAHSSTKV-SSNNSEDGTKVESDAPINSEGYGQSSMSKMSRRKRGALSETMSSFIDA 62
           TG++AH S KV SS++S D      D P      G  +  K+  +KR + +  +SS +  
Sbjct: 109 TGAHAHPSNKVPSSSDSSDPEFQFKDEPEVESAEGSKAKPKVKNKKRDSFAANISSALSQ 168

Query: 63  YVENSKRRNDIPEKR----------------------------------ILGSSSDL--- 122
           + EN+KRR D+ E++                                  +L +  DL   
Sbjct: 169 FAENAKRRVDVMERKLHCSHPGCSGVSGSMSIGEVGIGPLAAGMKECQALLNTMDDLDED 228

Query: 123 -----LEK--------------------------------------DEYEDEDLLMFFCL 182
                LEK                                      D+ EDE++++   L
Sbjct: 229 SYNKVLEKLHGDVLWRQMFMDMPERRRIAWIKKFNFCNMDPISDSDDDSEDEEVVVLLSL 288

Query: 183 LREELHKAQMIRQPCRTSTLRGHDYVVELLNANDTRCFDCFRMKRNEFVVFCEELKNTTN 242
              E +   +  +PCRTS LRGHDYV+E+LN ++ RC   FRMK   F+ FCE LK   N
Sbjct: 289 ALYEYYDMYIDHRPCRTSMLRGHDYVLEVLNGHEDRCHQNFRMKPQVFIAFCEALKLHAN 348

Query: 243 LKSSRYLTVQEQVAIFLLTISHNEWNRLVAERVQHSSQTISWYFNHVLKKVCQLGTKIIS 273
           LK SRYLT+QEQV IFLLTI HNE NR+V ER QHS  TIS YF+ VLK VC+LG  II 
Sbjct: 349 LKHSRYLTLQEQVCIFLLTIGHNERNRVVQERFQHSGHTISIYFHRVLKAVCKLGVVIIQ 408

BLAST of Lag0039310 vs. NCBI nr
Match: KAG8371481.1 (hypothetical protein BUALT_Bualt13G0092200 [Buddleja alternifolia])

HSP 1 Score: 217.6 bits (553), Expect = 2.4e-52
Identity = 104/193 (53.89%), Postives = 134/193 (69.43%), Query Frame = 0

Query: 83  DLLEKDEYEDEDLLMFFCLL--REELHKAQMIRQPCRTSTLRGHDYVVELLNANDTRCFD 142
           D+ E+ E  +ED++M F +L   EE  +  +++ PCR S + GH YV+EL+NAN TRC+D
Sbjct: 10  DIFEELEQIEEDVMMMFLMLFCFEEYERLYLLKTPCRNSKMSGHAYVMELMNANPTRCYD 69

Query: 143 CFRMKRNEFVVFCEELKNTTNLKSSRYLTVQEQVAIFLLTISHNEWNRLVAERVQHSSQT 202
            FRMK N F+ F   L     LK SRYL+  EQVAIFL  I+H   +R+ AE+ QHS +T
Sbjct: 70  MFRMKPNVFITFSNTLMENCGLKHSRYLSAYEQVAIFLHIIAHGITSRVAAEKFQHSGET 129

Query: 203 ISWYFNHVLKKVCQLGTKIISPLELDNVPPEIMFKSKYYPFFKDCVGAIDGTHINACIPQ 262
           IS  F+ VLK +C+LG +II+P   D VPPEI+   KYYPFFKDC+GAIDGTHI ACIP 
Sbjct: 130 ISKVFHRVLKAICKLGVEIIAPPNFDEVPPEILHNPKYYPFFKDCIGAIDGTHIEACIPI 189

Query: 263 HEQIPYRGRKTIP 274
            +QIPYRG+K  P
Sbjct: 190 PQQIPYRGKKVEP 202

BLAST of Lag0039310 vs. NCBI nr
Match: KAG8372299.1 (hypothetical protein BUALT_Bualt12G0051800 [Buddleja alternifolia])

HSP 1 Score: 216.9 bits (551), Expect = 4.0e-52
Identity = 104/195 (53.33%), Postives = 137/195 (70.26%), Query Frame = 0

Query: 81  SSDLLEKDEYEDEDLLMFFCLL--REELHKAQMIRQPCRTSTLRGHDYVVELLNANDTRC 140
           S D++E+ E  +ED++M F +L   EE  +  +++ PCR S + GH YV+EL+NAN TRC
Sbjct: 8   SYDIIEELEQIEEDVMMMFLMLFCFEEYERLYLLKTPCRNSKMSGHAYVMELMNANPTRC 67

Query: 141 FDCFRMKRNEFVVFCEELKNTTNLKSSRYLTVQEQVAIFLLTISHNEWNRLVAERVQHSS 200
           +D FRMK + F+ F   L +   LK SRYL+  EQVAIFL  I+H   +R+ AE+ QHS 
Sbjct: 68  YDMFRMKPDVFITFSNTLIDKCGLKHSRYLSAYEQVAIFLHIIAHGIMSRVAAEKFQHSG 127

Query: 201 QTISWYFNHVLKKVCQLGTKIISPLELDNVPPEIMFKSKYYPFFKDCVGAIDGTHINACI 260
           +TIS  F+ VLK +C+LG +II+P   D VPPEI+   KYYPFFKDC+GAIDGTHI ACI
Sbjct: 128 ETISKVFHRVLKAICKLGVEIIAPPNFDEVPPEILHNPKYYPFFKDCIGAIDGTHIEACI 187

Query: 261 PQHEQIPYRGRKTIP 274
           P  +QIPYRG+K  P
Sbjct: 188 PIPQQIPYRGKKVEP 202

BLAST of Lag0039310 vs. ExPASy TrEMBL
Match: A0A6J1DJT1 (uncharacterized protein LOC111020715 OS=Momordica charantia OX=3673 GN=LOC111020715 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.8e-50
Identity = 107/239 (44.77%), Postives = 146/239 (61.09%), Query Frame = 0

Query: 288 SKDVEVEEIFMPKRDMYMRLSVIAIRKNFEFRVNKSKKNMLVAYCVTRGCKWK------- 347
           + DV+  E+F  K+++ +R+ ++ +R NF+F+V KS   + +  CV   C W+       
Sbjct: 68  TNDVKEGEVFDTKKELSLRMHLVVMRLNFQFKVKKSTPELYILCCVDTSCTWRLRATKLR 127

Query: 348 ---------------------------AKSCVIENLIKTKFEDVGRTYRPKHIMNDIQQD 407
                                      AKS V+ +L++ KF DV RTYRPK I+ D++++
Sbjct: 128 DCNLFKIKKYYSIHTCNGGVLKQDHRQAKSWVVGHLVQAKFTDVSRTYRPKDIIQDMRKE 187

Query: 408 FGVNLSYDKAWRAREETFILAKGSPEESYRLLPRFGEALKIKNPDTVFDLEHKDNGHFKH 467
           +GVNLSYDKAWR+ EE   L +G P  SY LLP +GEALKI NP T+F+LE K   +FK+
Sbjct: 188 YGVNLSYDKAWRSSEEALRLIRGDPASSYGLLPTYGEALKIMNPGTIFELELKGGKYFKY 247

Query: 468 VFMALGASTGGFKSSIRLVLVVDETHLREKFCGKLLLAAGADGNNQIYPINSAFANGET 493
           VFMALG S  GF + IR VLVVD  HL+ KF G LL+A+GAD NNQIYP+  A  +GET
Sbjct: 248 VFMALGKSIRGFLACIRPVLVVDGAHLKGKFIGVLLIASGADANNQIYPVAFAIVDGET 306

BLAST of Lag0039310 vs. ExPASy TrEMBL
Match: A0A5A7VNP6 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001920 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.3e-48
Identity = 103/240 (42.92%), Postives = 149/240 (62.08%), Query Frame = 0

Query: 287 SSKDVEVEEIFMPKRDMYMRLSVIAIRKNFEFRVNKSKKNMLVAYCVTRGCKWK------ 346
           +S++++V +IF  KRD+ MRLSV+A++KNF+F V KS K +L   C+   C W+      
Sbjct: 231 TSEELDVGQIFFCKRDLSMRLSVLAMKKNFQFVVKKSTKEVLFVRCIDNKCGWRLRAVRL 290

Query: 347 ----------------------------AKSCVIENLIKTKFEDVGRTYRPKHIMNDIQQ 406
                                       AKS V+  LIK+KF+  GR Y+P+ I+ D++Q
Sbjct: 291 KDSNIFKIKKYVKVHSCSLKFLNRDHRQAKSWVVGELIKSKFKGAGRIYKPRDIIEDMRQ 350

Query: 407 DFGVNLSYDKAWRAREETFILAKGSPEESYRLLPRFGEALKIKNPDTVFDLEHKDNGHFK 466
           D+G+N+SY+KAWRARE  +   +GSPEE Y LL R+GEALK  NP T+F +E +D+  FK
Sbjct: 351 DYGINMSYEKAWRARENAYERVRGSPEEPYNLLHRYGEALKFTNPGTIFHMELEDDRFFK 410

Query: 467 HVFMALGASTGGFKSSIRLVLVVDETHLREKFCGKLLLAAGADGNNQIYPINSAFANGET 493
           ++FMA+GA   GF + IR V+V+D T L+ K+ G+L++A   DGNNQIYP+     + ET
Sbjct: 411 YLFMAVGACVRGFLNCIRPVIVMDGTFLKNKYRGQLIVAVCLDGNNQIYPLAFGVVDRET 470

BLAST of Lag0039310 vs. ExPASy TrEMBL
Match: A0A5A7U1P5 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00140 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.3e-48
Identity = 104/240 (43.33%), Postives = 149/240 (62.08%), Query Frame = 0

Query: 287 SSKDVEVEEIFMPKRDMYMRLSVIAIRKNFEFRVNKSKKNMLVAYCVTRGCKWK------ 346
           +S++++V +IF  KRD+ MRLSV+A++KNF+F V KS K +L   C+   C W+      
Sbjct: 231 TSEELDVGQIFFCKRDLSMRLSVLAMKKNFQFVVKKSTKEVLFVRCIDNKCGWRLRAVRL 290

Query: 347 ----------------------------AKSCVIENLIKTKFEDVGRTYRPKHIMNDIQQ 406
                                       AKS V+  LIK+KF+  GR Y+P+ I+ D++Q
Sbjct: 291 KDSNIFKIKKYVKVHSCSLEFLNRDHRQAKSWVVGELIKSKFKGPGRIYKPRDIIEDMRQ 350

Query: 407 DFGVNLSYDKAWRAREETFILAKGSPEESYRLLPRFGEALKIKNPDTVFDLEHKDNGHFK 466
           D+G+N+SY+KAWRARE  +   +GS EESY LL R+GEALK  NP T+F +E +DN  FK
Sbjct: 351 DYGINMSYEKAWRARENAYERVRGSSEESYNLLRRYGEALKFTNPGTIFHMELEDNRFFK 410

Query: 467 HVFMALGASTGGFKSSIRLVLVVDETHLREKFCGKLLLAAGADGNNQIYPINSAFANGET 493
           ++FMA+GA   GF + IR V+V+D T L+ K+ G+L++A   DGNNQIYP+     + ET
Sbjct: 411 YLFMAVGACVRGFLNCIRPVIVMDGTFLKNKYRGQLIVAVCLDGNNQIYPLAFGVVDRET 470

BLAST of Lag0039310 vs. ExPASy TrEMBL
Match: A0A6J1D234 (uncharacterized protein LOC111016888 OS=Momordica charantia OX=3673 GN=LOC111016888 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.2e-48
Identity = 109/254 (42.91%), Postives = 149/254 (58.66%), Query Frame = 0

Query: 273 PNGSTKSIIMPSQYSSKDVEVEEIFMPKRDMYMRLSVIAIRKNFEFRVNKSKKNMLVAYC 332
           PN      ++ S   + DV+  E+F  K+++ +R+ ++A+R NF+F+V KS   + +  C
Sbjct: 10  PNDEKLQFMVQSS-GTNDVKEGEVFDMKKELSLRMHLVAMRLNFQFKVKKSTPELYILRC 69

Query: 333 VTRGCKWK----------------------------------AKSCVIENLIKTKFEDVG 392
           V   C W+                                  AKS V+ +L++ KF DV 
Sbjct: 70  VDTSCTWRLRATKLRDCNMFKIKKYYSIHTCNGGVLKQDHRQAKSWVVGHLVQAKFTDVS 129

Query: 393 RTYRPKHIMNDIQQDFGVNLSYDKAWRAREETFILAKGSPEESYRLLPRFGEALKIKNPD 452
           RTYRPK I+ D+++++GVNLSYDKAWR+ EE   L +  P  SY LL  +GEALKI NP 
Sbjct: 130 RTYRPKDIIQDMRKEYGVNLSYDKAWRSSEEALRLIREDPASSYGLLSAYGEALKIMNPG 189

Query: 453 TVFDLEHKDNGHFKHVFMALGASTGGFKSSIRLVLVVDETHLREKFCGKLLLAAGADGNN 493
           T+F+LE KD  +FK+VFMALG S   F + IR VLVVD  HL+ KF G LL A+GAD NN
Sbjct: 190 TIFELELKDGKYFKYVFMALGQSIRRFLACIRPVLVVDGAHLKWKFRGVLLTASGADANN 249

BLAST of Lag0039310 vs. ExPASy TrEMBL
Match: A0A2I7YUI4 (MuDRA-like transposase OS=Cucumis sativus OX=3659 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.8e-48
Identity = 109/279 (39.07%), Postives = 160/279 (57.35%), Query Frame = 0

Query: 258 IPQHEQIP---YRGRKTIPNGSTKSII-------MPSQYSSKDVEVEEIFMPKRDMYMRL 317
           IPQH   P    +G+  +   S+   +            +S++ +V +IF  K+D+ MRL
Sbjct: 191 IPQHRDGPTKDCKGKSKVRYSSSSQKLKTDMNDWSEESSTSEEFDVGQIFFSKKDLSMRL 250

Query: 318 SVIAIRKNFEFRVNKSKKNMLVAYCVTRGCKWK--------------------------- 377
           SV+A++KNF+F V KS K +L   C+   C W+                           
Sbjct: 251 SVLAMKKNFQFVVKKSTKEVLFVRCIDNKCGWRLRAMRLKDSNIFKIKKYVKVHSCSLDV 310

Query: 378 -------AKSCVIENLIKTKFEDVGRTYRPKHIMNDIQQDFGVNLSYDKAWRAREETFIL 437
                  AKS V+  LIK+KF+ VGR Y+P+ I+ D++QD+G+N+SY+KAWRARE  +  
Sbjct: 311 LNRDHRQAKSWVVGELIKSKFKGVGRLYKPRDIIEDMRQDYGINMSYEKAWRARENAYER 370

Query: 438 AKGSPEESYRLLPRFGEALKIKNPDTVFDLEHKDNGHFKHVFMALGASTGGFKSSIRLVL 493
            +G PEESY LL R+GEALK+ N  T+F +E +DN  FK++FMA+G    GF + IR V+
Sbjct: 371 VRGCPEESYNLLLRYGEALKLANVGTIFHMELEDNRFFKYLFMAVGPCVRGFLNCIRPVI 430

BLAST of Lag0039310 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 90.9 bits (224), Expect = 3.1e-18
Identity = 52/161 (32.30%), Postives = 81/161 (50.31%), Query Frame = 0

Query: 113 RQPCRTSTLRGHDYVVELLNANDTRCFDCFRMKRNEFVVFCEELKNTTNLKSSRYLTVQE 172
           ++  + S   G+ +V ++LN  + +CF+ FRM +  F   C+ L+    L+ +  + ++ 
Sbjct: 17  KEVSKISISDGNKFVYQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEA 76

Query: 173 QVAIFLLTISHNEWNRLVAERVQHSSQTISWYFNHVLKKVCQLGTKIISP------LELD 232
           Q+AIFL  I HN   R V E   +S +TIS +FN+VL  V  +      P      LE D
Sbjct: 77  QLAIFLFIIGHNLRTRAVQELFCYSGETISRHFNNVLNAVIAISKDFFQPNSNSDTLEND 136

Query: 233 NVPPEIMFKSKYYPFFKDCVGAIDGTHINACIPQHEQIPYR 268
           +            P+FKDCVG +D  HI   +   EQ P+R
Sbjct: 137 D------------PYFKDCVGVVDSFHIPVMVGVDEQGPFR 165

BLAST of Lag0039310 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 68.2 bits (165), Expect = 2.2e-11
Identity = 41/145 (28.28%), Postives = 64/145 (44.14%), Query Frame = 0

Query: 113 RQPCRTSTLRGHDYVVELLNANDTRCFDCFRMKRNEFVVFCEELKNTTNLKSSRYLTVQE 172
           R P +     G   +   L  +   C    RM    F   C  L+   +L+ +  ++++E
Sbjct: 41  RAPVQIDRGLGWRNIWRRLQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEE 100

Query: 173 QVAIFLLTISHNEWNRLVAERVQHSSQTISWYFNHVLKKVCQLGTKII---SPLELDNVP 232
            VA+FL    HNE  R V  R   + +T+   F  VL     L    I   +  EL  +P
Sbjct: 101 SVAMFLRICGHNEVYRDVGLRFGRNQETVQRKFREVLTATELLACDYIRTPTRQELYRIP 160

Query: 233 PEIMFKSKYYPFFKDCVGAIDGTHI 255
             +    +Y+P+F   VGA+DGTH+
Sbjct: 161 ERLQVDQRYWPYFSGFVGAMDGTHV 185

BLAST of Lag0039310 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 1.4e-10
Identity = 38/124 (30.65%), Postives = 62/124 (50.00%), Query Frame = 0

Query: 127 VVELLNANDTRCFDCFRMKRNEFVVFCEELKNTTNLKSSRYLTVQEQVAIFLLTISHNEW 186
           +   + +N+  C    RM    F   CE L     L+SS  +++ E VAIFL+  + N+ 
Sbjct: 13  IAHQIYSNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDT 72

Query: 187 NRLVAERVQHSSQTISWYFNHVLKKVCQLGTKIISPL---ELDNVPPEIMFKSKYYPFFK 246
            R +A R  H+ +TI   F+ VLK + +L  + I P    EL  +   +   ++Y+PF  
Sbjct: 73  QRDIALRFGHAQETIWRKFHDVLKAMERLAVEYIRPRKVEELRAISNRLQDDTRYWPFLM 132

Query: 247 DCVG 248
           D +G
Sbjct: 133 DLLG 136

BLAST of Lag0039310 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 2.1e-06
Identity = 22/43 (51.16%), Postives = 29/43 (67.44%), Query Frame = 0

Query: 228 VPPEIMFKSKYYPFFKDCVGAIDGTHINACIPQHEQIPYRGRK 271
           VP +I   ++ YP+FKDCVGAID THI A + Q +   +R RK
Sbjct: 8   VPRKIRESTRLYPYFKDCVGAIDDTHIFAMVSQKKMPSFRNRK 50

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAF3433792.18.4e-6644.28hypothetical protein FNV43_RR24895 [Rhamnella rubrinervis][more]
KAF7148819.16.0e-5639.77hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii][more]
KAF7123090.13.0e-5539.32hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii][more]
KAG8371481.12.4e-5253.89hypothetical protein BUALT_Bualt13G0092200 [Buddleja alternifolia][more]
KAG8372299.14.0e-5253.33hypothetical protein BUALT_Bualt12G0051800 [Buddleja alternifolia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DJT11.8e-5044.77uncharacterized protein LOC111020715 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A5A7VNP61.3e-4842.92MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2... [more]
A0A5A7U1P51.3e-4843.33MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1... [more]
A0A6J1D2342.2e-4842.91uncharacterized protein LOC111016888 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A2I7YUI43.8e-4839.07MuDRA-like transposase OS=Cucumis sativus OX=3659 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G41980.13.1e-1832.30CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... [more]
AT1G43722.12.2e-1128.28unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G28730.11.4e-1030.65unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G28950.12.1e-0651.16unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004332Transposase, MuDR, plantPFAMPF03108DBD_Tnp_Mutcoord: 301..341
e-value: 2.8E-6
score: 27.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 111..296
NoneNo IPR availablePANTHERPTHR22930:SF218DUAL SPECIFICITY PHOSPHATASE DOMAIN PROTEINcoord: 111..296

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0039310.1Lag0039310.1mRNA