Lag0039257 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0039257
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr2: 40070483 .. 40071310 (-)
RNA-Seq Expression	Lag0039257
Synteny	Lag0039257

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAAACGAGAGCGAGAAAAGAGAGAGATAACGAGGAAGAGGAGGTACCCGTTACCCCCGAGGTTCAGAAAGCAAAAACGAAAAAGAAGAGGACACCGGAGGAGAAAGAAGCTAAAAGAAGAAGACGACAACAAATAGTTGAAGAACAAGAAAAGGCAACAGAGGATGCGGCTGCTGCAGTGATTGAAGAAGGCCCGCAAGAACCGCAAGAACAGACCGCGGGAGAGGCTGATCGGAGAATTGCGGATACCGAACAACATACAGAGGTTGTGCCTGAAGGAGATACGGAGCCAGTACAGGAGGCTCGAGTGGAAGTAGTCATGCCGGAGGTGCCCAGACGTCGCCGAATTAAGCGGAAAGCCGGCCGTATTCAGGTAGTACGAACTGATACCCCCTCGCCTCCGACTACTGACTCTGAAAAAGACAATACAGAGAGAGAGGAACAAGAGAAGAAGGAAGCTGAAGAGAAGACGAGAGAAGAAGAAGCAAAAAGGGTTGAGGAAGAGATTCTGCCCAAACAAAGAGAAGACAAGGGCAAAGGAATTGCTGAAGCATCGAGTGAGGCTGACGAGATTGAGGAACAAAGGTTGCCTTTTATCCGCTTCATCAATGACCTTGCTCGAGCAAAATACCAGGAGGTGCTGAAACGGGACTTCTTATTCGAACGAGGATTTGGTAGTGATTTGCCCAGGTTCTTGGAGTCTGGAATCGTGAACCTCGGGTGGAGGCAATTTTGTGCGAAACCAGAACCTGTCAATTCCAACATTGTTCGGGAATTTTACGCCAACCTTGACGTTAAGGATGATTTTGAAGTTATTGTGTGA

mRNA sequence

ATGGCTAAAACGAGAGCGAGAAAAGAGAGAGATAACGAGGAAGAGGAGGTACCCGTTACCCCCGAGGTTCAGAAAGCAAAAACGAAAAAGAAGAGGACACCGGAGGAGAAAGAAGCTAAAAGAAGAAGACGACAACAAATAGTTGAAGAACAAGAAAAGGCAACAGAGGATGCGGCTGCTGCAGTGATTGAAGAAGGCCCGCAAGAACCGCAAGAACAGACCGCGGGAGAGGCTGATCGGAGAATTGCGGATACCGAACAACATACAGAGGTTGTGCCTGAAGGAGATACGGAGCCAGTACAGGAGGCTCGAGTGGAAGTAGTCATGCCGGAGGTGCCCAGACGTCGCCGAATTAAGCGGAAAGCCGGCCGTATTCAGGTAGTACGAACTGATACCCCCTCGCCTCCGACTACTGACTCTGAAAAAGACAATACAGAGAGAGAGGAACAAGAGAAGAAGGAAGCTGAAGAGAAGACGAGAGAAGAAGAAGCAAAAAGGGTTGAGGAAGAGATTCTGCCCAAACAAAGAGAAGACAAGGGCAAAGGAATTGCTGAAGCATCGAGTGAGGCTGACGAGATTGAGGAACAAAGGTTGCCTTTTATCCGCTTCATCAATGACCTTGCTCGAGCAAAATACCAGGAGGTGCTGAAACGGGACTTCTTATTCGAACGAGGATTTGGTAGTGATTTGCCCAGGTTCTTGGAGTCTGGAATCGTGAACCTCGGGTGGAGGCAATTTTGTGCGAAACCAGAACCTGTCAATTCCAACATTGTTCGGGAATTTTACGCCAACCTTGACGTTAAGGATGATTTTGAAGTTATTGTGTGA

Coding sequence (CDS)

ATGGCTAAAACGAGAGCGAGAAAAGAGAGAGATAACGAGGAAGAGGAGGTACCCGTTACCCCCGAGGTTCAGAAAGCAAAAACGAAAAAGAAGAGGACACCGGAGGAGAAAGAAGCTAAAAGAAGAAGACGACAACAAATAGTTGAAGAACAAGAAAAGGCAACAGAGGATGCGGCTGCTGCAGTGATTGAAGAAGGCCCGCAAGAACCGCAAGAACAGACCGCGGGAGAGGCTGATCGGAGAATTGCGGATACCGAACAACATACAGAGGTTGTGCCTGAAGGAGATACGGAGCCAGTACAGGAGGCTCGAGTGGAAGTAGTCATGCCGGAGGTGCCCAGACGTCGCCGAATTAAGCGGAAAGCCGGCCGTATTCAGGTAGTACGAACTGATACCCCCTCGCCTCCGACTACTGACTCTGAAAAAGACAATACAGAGAGAGAGGAACAAGAGAAGAAGGAAGCTGAAGAGAAGACGAGAGAAGAAGAAGCAAAAAGGGTTGAGGAAGAGATTCTGCCCAAACAAAGAGAAGACAAGGGCAAAGGAATTGCTGAAGCATCGAGTGAGGCTGACGAGATTGAGGAACAAAGGTTGCCTTTTATCCGCTTCATCAATGACCTTGCTCGAGCAAAATACCAGGAGGTGCTGAAACGGGACTTCTTATTCGAACGAGGATTTGGTAGTGATTTGCCCAGGTTCTTGGAGTCTGGAATCGTGAACCTCGGGTGGAGGCAATTTTGTGCGAAACCAGAACCTGTCAATTCCAACATTGTTCGGGAATTTTACGCCAACCTTGACGTTAAGGATGATTTTGAAGTTATTGTGTGA

Protein sequence

MAKTRARKERDNEEEEVPVTPEVQKAKTKKKRTPEEKEAKRRRRQQIVEEQEKATEDAAAAVIEEGPQEPQEQTAGEADRRIADTEQHTEVVPEGDTEPVQEARVEVVMPEVPRRRRIKRKAGRIQVVRTDTPSPPTTDSEKDNTEREEQEKKEAEEKTREEEAKRVEEEILPKQREDKGKGIAEASSEADEIEEQRLPFIRFINDLARAKYQEVLKRDFLFERGFGSDLPRFLESGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKDDFEVIV

Homology

The following BLAST results are available for this feature:

BLAST of Lag0039257 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0039257 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0039257 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0039257 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 37..57
None	No IPR available	COILS	Coil	Coil	coord: 138..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0039257.1	Lag0039257.1	mRNA