Lag0039247 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0039247
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUlp1-like peptidase
Locationchr2: 39807552 .. 39807860 (-)
RNA-Seq ExpressionLag0039247
SyntenyLag0039247
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGGACTCTGGAGGAGCCCCGCTCCTCGAGTTCAACGGGACGATGTACCCAGATTGGGGTTGGAGAGGAGGTACTTTGCAGAGACCAATCCGTCGGTTCCACTCAAATTGGACAAGTTGGAGGAGAAGTACAAGAAACTACAGTTCGAGACGGACGAGGATGCAGTCAGGGTCACCTTGGTTGTTTACACGGAGGTGGCAATGATGGGGAAGAACAAGAGCAAGAGTTTTGTTGATAGAACGTTGTTCGACGACGTTGAAGACCTGGATTATTATAACAACAGGGACTGGGGTAATATCATATGA

mRNA sequence

ATGACAGGACTCTGGAGGAGCCCCGCTCCTCGAGTTCAACGGGACGATGTACCCAGATTGGGGTTGGAGAGGAGGTACTTTGCAGAGACCAATCCGTCGGTTCCACTCAAATTGGACAAGTTGGAGGAGAAGTACAAGAAACTACAGTTCGAGACGGACGAGGATGCAGTCAGGGTCACCTTGGTTGTTTACACGGAGGTGGCAATGATGGGGAAGAACAAGAGCAAGAGTTTTGTTGATAGAACGTTGTTCGACGACGTTGAAGACCTGGATTATTATAACAACAGGGACTGGGGTAATATCATATGA

Coding sequence (CDS)

ATGACAGGACTCTGGAGGAGCCCCGCTCCTCGAGTTCAACGGGACGATGTACCCAGATTGGGGTTGGAGAGGAGGTACTTTGCAGAGACCAATCCGTCGGTTCCACTCAAATTGGACAAGTTGGAGGAGAAGTACAAGAAACTACAGTTCGAGACGGACGAGGATGCAGTCAGGGTCACCTTGGTTGTTTACACGGAGGTGGCAATGATGGGGAAGAACAAGAGCAAGAGTTTTGTTGATAGAACGTTGTTCGACGACGTTGAAGACCTGGATTATTATAACAACAGGGACTGGGGTAATATCATATGA

Protein sequence

MTGLWRSPAPRVQRDDVPRLGLERRYFAETNPSVPLKLDKLEEKYKKLQFETDEDAVRVTLVVYTEVAMMGKNKSKSFVDRTLFDDVEDLDYYNNRDWGNII
Homology
BLAST of Lag0039247 vs. NCBI nr
Match: XP_038891634.1 (uncharacterized protein LOC120081026 [Benincasa hispida])

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-22
Identity = 60/102 (58.82%), Postives = 71/102 (69.61%), Query Frame = 0

Query: 1   MTGLWRSPAPRVQRDDVPRLGLERRYFAETNPSVPLKLDKLEEKYKKLQFETDEDAVRVT 60
           +TGLWR P  +V R +     L  RYF   +      L+ LEE+YKKL FE D DAV++T
Sbjct: 57  ITGLWRFPT-QVVRSEKSSQELFTRYFGNRSILDAFHLNLLEEEYKKLVFENDNDAVKIT 116

Query: 61  LVVYTEVAMMGKNKSKSFVDRTLFDDVEDLDYYNNRDWGNII 103
           LV YTEVAM+GKNK K+ VD TLFDDVED+DYYNN DWG II
Sbjct: 117 LVYYTEVAMIGKNKQKNVVDGTLFDDVEDIDYYNNLDWGTII 157

BLAST of Lag0039247 vs. NCBI nr
Match: XP_038885931.1 (uncharacterized protein LOC120076239 [Benincasa hispida])

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-22
Identity = 58/102 (56.86%), Postives = 71/102 (69.61%), Query Frame = 0

Query: 1   MTGLWRSPAPRVQRDDVPRLGLERRYFAETNPSVPLKLDKLEEKYKKLQFETDEDAVRVT 60
           +TGLWRSP  RV R +     L  RYF   + S    L+ LEE+YK L FE D+D V++T
Sbjct: 33  ITGLWRSPT-RVVRSEESSQELATRYFGNQSTSNTFHLNLLEEEYKNLVFENDDDVVKIT 92

Query: 61  LVVYTEVAMMGKNKSKSFVDRTLFDDVEDLDYYNNRDWGNII 103
           L+ YT+VAMMGKNK KS  DRTLF+DVED+DYYNN +W  II
Sbjct: 93  LIYYTKVAMMGKNKQKSVDDRTLFEDVEDIDYYNNLNWDTII 133

BLAST of Lag0039247 vs. NCBI nr
Match: XP_038888550.1 (uncharacterized protein LOC120078361 isoform X1 [Benincasa hispida])

HSP 1 Score: 115.5 bits (288), Expect = 2.6e-22
Identity = 60/102 (58.82%), Postives = 71/102 (69.61%), Query Frame = 0

Query: 1   MTGLWRSPAPRVQRDDVPRLGLERRYFAETNPSVPLKLDKLEEKYKKLQFETDEDAVRVT 60
           +TGLWRS   RV R +     L  +YF     S    L  LEE+YK+L FE D+DAV++T
Sbjct: 97  ITGLWRS-LTRVGRSEESSHELFTKYFGSRLASDTFHLHLLEEEYKELVFENDDDAVKIT 156

Query: 61  LVVYTEVAMMGKNKSKSFVDRTLFDDVEDLDYYNNRDWGNII 103
           LV YTEVAMM KNK K+ VDRTLFDDVED+DYYN+ DWG II
Sbjct: 157 LVYYTEVAMMSKNKQKNVVDRTLFDDVEDIDYYNSLDWGTII 197

BLAST of Lag0039247 vs. NCBI nr
Match: XP_038882418.1 (uncharacterized protein LOC120073687 [Benincasa hispida])

HSP 1 Score: 110.9 bits (276), Expect = 6.4e-21
Identity = 55/102 (53.92%), Postives = 70/102 (68.63%), Query Frame = 0

Query: 1   MTGLWRSPAPRVQRDDVPRLGLERRYFAETNPSVPLKLDKLEEKYKKLQFETDEDAVRVT 60
           +TGLWRSP  RV R +     L  +YF     S    L  LE+++K+L FE D+D V++T
Sbjct: 75  ITGLWRSPT-RVGRSEKSSHELFTKYFGSRLASDAFHLHLLEKEFKELVFENDDDVVKIT 134

Query: 61  LVVYTEVAMMGKNKSKSFVDRTLFDDVEDLDYYNNRDWGNII 103
           LV YTEVAMMGK   K+ +DRTLFDD+ED+DYYN+ DWG II
Sbjct: 135 LVYYTEVAMMGKTNQKNVMDRTLFDDIEDIDYYNSLDWGTII 175

BLAST of Lag0039247 vs. NCBI nr
Match: XP_038875066.1 (uncharacterized protein LOC120067593 [Benincasa hispida])

HSP 1 Score: 109.8 bits (273), Expect = 1.4e-20
Identity = 56/102 (54.90%), Postives = 69/102 (67.65%), Query Frame = 0

Query: 1   MTGLWRSPAPRVQRDDVPRLGLERRYFAETNPSVPLKLDKLEEKYKKLQFETDEDAVRVT 60
           +TGLW+SP   V R +     L  RYF     S     + L+E+YK L FE D+D V++T
Sbjct: 97  ITGLWQSPT-LVVRSEESSQELATRYFGNRLTSDTFHPNLLKEEYKNLVFENDDDVVKIT 156

Query: 61  LVVYTEVAMMGKNKSKSFVDRTLFDDVEDLDYYNNRDWGNII 103
           LV YTE+AMMGKNK KS VDRTLF+DVED+ YYN+ DWG II
Sbjct: 157 LVYYTEIAMMGKNKQKSVVDRTLFEDVEDIYYYNSLDWGTII 197

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038891634.11.2e-2258.82uncharacterized protein LOC120081026 [Benincasa hispida][more]
XP_038885931.11.5e-2256.86uncharacterized protein LOC120076239 [Benincasa hispida][more]
XP_038888550.12.6e-2258.82uncharacterized protein LOC120078361 isoform X1 [Benincasa hispida][more]
XP_038882418.16.4e-2153.92uncharacterized protein LOC120073687 [Benincasa hispida][more]
XP_038875066.11.4e-2054.90uncharacterized protein LOC120067593 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0039247.1Lag0039247.1mRNA