Lag0038652 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0038652
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRibonuclease H
Locationchr2: 22351687 .. 22352966 (-)
RNA-Seq ExpressionLag0038652
SyntenyLag0038652
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACCTCCGAGGGATGACCGAGTCCAGAAGGAGGTCGGGCCGAGCCGTAAAAAGGCCCGCAGGAGTTCTCCGCTAACCCAGGCACCAGGTATGAATACGGGAAACAATGGCAGGTCGGAGGCTCGGCAAAAGTCCGAGCAGGGTCAAAAACGGAGAGAGACGTCCGGATGGTTAAAAGGGGAAGGTAGTTACGAGACCTCCCAAAAGAAAGTAGAGAACGAGGATATAGAAGGTTTGATTGGACAGGAGGGGCCAGTCTTCACCGACGAGATCATGAAGGGGAGGTGCCGCACAAATTCAGGGTGCCAAACTTTCCGCAATACGATGGGAAAAAGGATCCGAAACAGCACCTAGATGCATACCGAACTTGGATGGACTTTCCCGGGGCAAACGAAGCGACAAGGTGCCGAGCCTTTGCACTTACACTCACGGGCTTAGCAAGGCAGTGGTTTGGGAAGATCCCGCGGAGGTCAATAGGCTCGTTAAGAGAGTTGGCCCGGGTGTTTGTCACGCAGTTCCTAGGAGCCCGTAGTCGACAGAAACCTCAAATCAACTTGCTAACGGTGAAGCAGGGGCCCCGAGAAAGCCTAAGGGATTACATTAACAGATTTAGTAACGAGGTTTTGCAGGTAGAAAGTTACGATGATGGAGTTGCCTTGACTGCAGTGATTTCAGGTTTACAGGACGAAAGACTACTCAATTCAATCGGAGAAAGCCAGCCACGAACGTACGTAGAGTTCATGACTCGGGCTCAAAGATATATAAGCGCCGAGGAGCTGTTGAAATCCAAGCAGGAAGAAAGAGAGAGTCGGGGAATGTCAACATCGGACCGGCGCCGCGAGGACAAGGGAAAGAGGCACCAAGCCGAGGGAAGAAGCCGGAGCCGACCTGAGCACTCCTCGGCCAATGGTCGAGGCCGACCAGAGGCAAAGGAGCTGCAAGGTCGAGCAGAGCCTAAGTCCAGGTACGATAGGTATACCCCACTGACAGCTTCGCTTGAACAGGTCTTGACCGCAATCCAGGACACGAATCTGTTGAAACGCCCGGAGAAGCTGAGATCGGGCCCCGACAGGAGAAACCGAAACAAATATTGCATGTTTCACGGGGATCACGGCCATACAACTCTAGAGTGCATCCAGTTGCGGGATGAGATAGAAACCCTGATCCGAGAAGGTTACCTCAAGGAGTTCGTGGGGGCGATAGAAACAAGAGGCCGCTACCAGCGGACCAAGGCAAAGGAGGAGCCAACCCGCCGCTTGAGATTCGAACCATTTTAG

mRNA sequence

ATGCCACCTCCGAGGGATGACCGAGTCCAGAAGGAGGTCGGGCCGAGCCGTAAAAAGGCCCGCAGGAGTTCTCCGCTAACCCAGGCACCAGGTATGAATACGGGAAACAATGGCAGGTCGGAGGCTCGGCAAAAGTCCGAGCAGGGTCAAAAACGGAGAGAGACGTCCGGATGGTTAAAAGGGGAAGGAGGGGCCAGTCTTCACCGACGAGATCATGAAGGGGAGGTGCCGCACAAATTCAGGGTGCCAAACTTTCCGCAATACGATGGGAAAAAGGATCCGAAACAGCACCTAGATGCATACCGAACTTGGATGGACTTTCCCGGGGCAAACGAAGCGACAAGGTGCCGAGCCTTTGCACTTACACTCACGGGCTTAGCAAGGCAGTGGTTTGGGAAGATCCCGCGGAGGTCAATAGGCTCGTTAAGAGAGTTGGCCCGGGTGTTTGTCACGCAGTTCCTAGGAGCCCGTAGTCGACAGAAACCTCAAATCAACTTGCTAACGGTGAAGCAGGGGCCCCGAGAAAGCCTAAGGGATTACATTAACAGATTTAGTAACGAGGTTTTGCAGGTAGAAAGTTACGATGATGGAGTTGCCTTGACTGCAGTGATTTCAGGTTTACAGGACGAAAGACTACTCAATTCAATCGGAGAAAGCCAGCCACGAACGTACGTAGAGTTCATGACTCGGGCTCAAAGATATATAAGCGCCGAGGAGCTGTTGAAATCCAAGCAGGAAGAAAGAGAGAGTCGGGGAATGTCAACATCGGACCGGCGCCGCGAGGACAAGGGAAAGAGGCACCAAGCCGAGGGAAGAAGCCGGAGCCGACCTGAGCACTCCTCGGCCAATGGTCGAGGCCGACCAGAGGCAAAGGAGCTGCAAGGTCGAGCAGAGCCTAAGTCCAGGTACGATAGGTATACCCCACTGACAGCTTCGCTTGAACAGGTCTTGACCGCAATCCAGGACACGAATCTGTTGAAACGCCCGGAGAAGCTGAGATCGGGCCCCGACAGGAGAAACCGAAACAAATATTGCATGTTTCACGGGGATCACGGCCATACAACTCTAGAGTGCATCCAGTTGCGGGATGAGATAGAAACCCTGATCCGAGAAGGTTACCTCAAGGAGTTCGTGGGGGCGATAGAAACAAGAGGCCGCTACCAGCGGACCAAGGCAAAGGAGGAGCCAACCCGCCGCTTGAGATTCGAACCATTTTAG

Coding sequence (CDS)

ATGCCACCTCCGAGGGATGACCGAGTCCAGAAGGAGGTCGGGCCGAGCCGTAAAAAGGCCCGCAGGAGTTCTCCGCTAACCCAGGCACCAGGTATGAATACGGGAAACAATGGCAGGTCGGAGGCTCGGCAAAAGTCCGAGCAGGGTCAAAAACGGAGAGAGACGTCCGGATGGTTAAAAGGGGAAGGAGGGGCCAGTCTTCACCGACGAGATCATGAAGGGGAGGTGCCGCACAAATTCAGGGTGCCAAACTTTCCGCAATACGATGGGAAAAAGGATCCGAAACAGCACCTAGATGCATACCGAACTTGGATGGACTTTCCCGGGGCAAACGAAGCGACAAGGTGCCGAGCCTTTGCACTTACACTCACGGGCTTAGCAAGGCAGTGGTTTGGGAAGATCCCGCGGAGGTCAATAGGCTCGTTAAGAGAGTTGGCCCGGGTGTTTGTCACGCAGTTCCTAGGAGCCCGTAGTCGACAGAAACCTCAAATCAACTTGCTAACGGTGAAGCAGGGGCCCCGAGAAAGCCTAAGGGATTACATTAACAGATTTAGTAACGAGGTTTTGCAGGTAGAAAGTTACGATGATGGAGTTGCCTTGACTGCAGTGATTTCAGGTTTACAGGACGAAAGACTACTCAATTCAATCGGAGAAAGCCAGCCACGAACGTACGTAGAGTTCATGACTCGGGCTCAAAGATATATAAGCGCCGAGGAGCTGTTGAAATCCAAGCAGGAAGAAAGAGAGAGTCGGGGAATGTCAACATCGGACCGGCGCCGCGAGGACAAGGGAAAGAGGCACCAAGCCGAGGGAAGAAGCCGGAGCCGACCTGAGCACTCCTCGGCCAATGGTCGAGGCCGACCAGAGGCAAAGGAGCTGCAAGGTCGAGCAGAGCCTAAGTCCAGGTACGATAGGTATACCCCACTGACAGCTTCGCTTGAACAGGTCTTGACCGCAATCCAGGACACGAATCTGTTGAAACGCCCGGAGAAGCTGAGATCGGGCCCCGACAGGAGAAACCGAAACAAATATTGCATGTTTCACGGGGATCACGGCCATACAACTCTAGAGTGCATCCAGTTGCGGGATGAGATAGAAACCCTGATCCGAGAAGGTTACCTCAAGGAGTTCGTGGGGGCGATAGAAACAAGAGGCCGCTACCAGCGGACCAAGGCAAAGGAGGAGCCAACCCGCCGCTTGAGATTCGAACCATTTTAG

Protein sequence

MPPPRDDRVQKEVGPSRKKARRSSPLTQAPGMNTGNNGRSEARQKSEQGQKRRETSGWLKGEGGASLHRRDHEGEVPHKFRVPNFPQYDGKKDPKQHLDAYRTWMDFPGANEATRCRAFALTLTGLARQWFGKIPRRSIGSLRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVESYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESRGMSTSDRRREDKGKRHQAEGRSRSRPEHSSANGRGRPEAKELQGRAEPKSRYDRYTPLTASLEQVLTAIQDTNLLKRPEKLRSGPDRRNRNKYCMFHGDHGHTTLECIQLRDEIETLIREGYLKEFVGAIETRGRYQRTKAKEEPTRRLRFEPF
Homology
BLAST of Lag0038652 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 254.6 bits (649), Expect = 1.4e-63
Identity = 158/389 (40.62%), Postives = 219/389 (56.30%), Query Frame = 0

Query: 14  GPSRKKARRSSPLTQAPGMNTGNNGRSEARQK-SEQGQKRRETSGWLKGEGGASLHRRDH 73
           G S    R S P++   G        SE R    E+G    E    L  +  +       
Sbjct: 130 GKSDHDDRNSEPISLDKGKPADRPESSEKRHSHKEKGFDLEE----LLDQADSPFTEEIM 189

Query: 74  EGEVPHKFRVPNFPQYDGKKDPKQHLDAYRTWMDFPGANEATRCRAFALTLTGLARQWFG 133
             +VP KF++P   Q+D   DP  HLDAYR WMD  G +EA RCR F+ TL G AR WF 
Sbjct: 190 REKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLNGSARIWFR 249

Query: 134 KIPRRSIGSLRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVE 193
           ++ R SI S + LAR FVTQF+G R R +P   LLT+KQ   ESLRDY+ RF+ E LQVE
Sbjct: 250 QLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLRDYVARFNEEKLQVE 309

Query: 194 SYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESRG 253
              D V+L A +SG++DE L  S G+  P T+ E ++RAQRY+SA E   SK+E    R 
Sbjct: 310 GLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFYSKREPDGKR- 369

Query: 254 MSTSDRRREDKGKRHQAEGRSRSRPEHSSANGRGRPEAKELQGRAEPKSRYDRYTPLTAS 313
              +D +RE          RS  +P+ S      R E ++   + +P  ++++YTP T  
Sbjct: 370 ---TDPKRE----------RSGDKPQGS------RWEKRDRSSQKDPPRKFEKYTPTTVP 429

Query: 314 LEQVLTAIQDTNLLKRPEKLRSGPDRRNRNKYCMFHGDHGHTTLECIQLRDEIETLIREG 373
           +EQVL  I+D  LLK PE++++   +R++ +YC+FH DHGH T +C  L++E+E LIR G
Sbjct: 430 IEQVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRG 489

Query: 374 YLKEFVGAIETRGRYQRTKAKEEPTRRLR 402
           YLKE+V   E     Q  ++ + P R +R
Sbjct: 490 YLKEYV---EEPKATQNGESDKSPAREIR 491

BLAST of Lag0038652 vs. NCBI nr
Match: XP_024041095.1 (uncharacterized protein LOC112098853 [Citrus clementina])

HSP 1 Score: 240.0 bits (611), Expect = 3.7e-59
Identity = 128/321 (39.88%), Postives = 201/321 (62.62%), Query Frame = 0

Query: 77  PHKFRVPNFPQYDGKKDPKQHLDAYRTWMDFPGANEATRCRAFALTLTGLARQWFGKIPR 136
           P +F +P    YDG++DP +HL+ YRT M+  GA++A  CRAF LTL G AR+WF ++  
Sbjct: 187 PPRFHLPQMEPYDGQRDPTEHLELYRTLMEVQGASQAILCRAFPLTLVGAARRWFRRLQP 246

Query: 137 RSIGSLRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVESYDD 196
            SI S  +L+R F + F  AR R KP   LLTVKQ   E+LRDYI R++NE+ QV+ YDD
Sbjct: 247 HSISSFGDLSREFTSHFRSARQRGKPVTYLLTVKQQEGETLRDYIRRYNNEITQVDGYDD 306

Query: 197 GVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESRGMSTS 256
           G+AL+ ++ GL+  +L  S+ +  P +Y E + RA++Y +AEE  K++ +E   +G ST 
Sbjct: 307 GIALSGIMEGLRMGKLWWSVSKRPPTSYSEMLARAEKYANAEERFKNRNQE---KGESTK 366

Query: 257 DRRREDKGKRHQAEGRSRSRPEHSSANGRGRP-EAKELQG-RAEPKSRYDRYTPLTASLE 316
            ++++D  +      R   RP+ S    + RP E  E++  R    S++  +T L    E
Sbjct: 367 GKKKKDDQRE-----RRVVRPDQSLRRNQFRPGERSEVRDTRPRLASQFTNFTELNTPRE 426

Query: 317 QVLTAIQDTNLLKRPEKLRSGPDRRNRNKYCMFHGDHGHTTLECIQLRDEIETLIREGYL 376
           Q+L  +++  L + P  +++ P RRN NKYC FH DHGH T EC +L+++IE+L+R+G L
Sbjct: 427 QILMQVRNPTLFRTPPPMKTNPSRRNPNKYCHFHKDHGHDTSECFELKEQIESLVRQGQL 486

Query: 377 KEFVGAIETRGRYQRTKAKEE 396
           +E+V   E R + ++ ++ ++
Sbjct: 487 QEYVRNPEDRVKSEQPESSKK 499

BLAST of Lag0038652 vs. NCBI nr
Match: XP_023916366.1 (uncharacterized protein LOC112027956 [Quercus suber])

HSP 1 Score: 223.0 bits (567), Expect = 4.6e-54
Identity = 119/304 (39.14%), Postives = 182/304 (59.87%), Query Frame = 0

Query: 76  VPHKFRVPNFPQYDGKKDPKQHLDAYRTWMDFPGANEATRCRAFALTLTGLARQWFGKIP 135
           +P KF++P+   YDG +DP  H+  ++T M   G  +   CRAF  TL G AR WF KIP
Sbjct: 147 LPPKFKMPSLDSYDGTRDPFDHIATFKTTMHLQGVPDEIMCRAFPTTLKGPARVWFSKIP 206

Query: 136 RRSIGSLRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVESYD 195
             S+ S  EL+++FV  F+G +  ++   +LLT++QG  ESLR +I RF+ + L V+  D
Sbjct: 207 PNSVTSFEELSKLFVNNFIGGQRHKRSSSSLLTIEQGENESLRSFITRFNRDALAVDEVD 266

Query: 196 DGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESRGMST 255
           D + L A  +G+  +  ++ + E  P+T  E +  AQ +++AE+ + +K+ +R  R +  
Sbjct: 267 DKLLLAAFHNGVHSDLFIHKLYEQAPQTMAELVHSAQNFMNAEDAIIAKKRKRLER-VEA 326

Query: 256 SDRRREDKGKRHQAEGRSRSRPEHSSANGRGRPEAKELQGRAEPKSRYDRYTPLTASLEQ 315
           +  R+ ++G R + +GR++ R              K+   +A P +R  +YTPL   LEQ
Sbjct: 327 NPMRQSEQGPRPK-KGRTKDR--------------KDRDKKAGPSARNQQYTPLNMPLEQ 386

Query: 316 VLTAIQDTNLLKRPEKLRSGPDRRNRNKYCMFHGDHGHTTLECIQLRDEIETLIREGYLK 375
           VL  I+D   LK PEK+R  P++RNR+KYC FH DHGH T EC  L+ +IE LIR+G LK
Sbjct: 387 VLMQIKDEPSLKWPEKMRGDPNKRNRSKYCRFHRDHGHDTDECFDLKQQIENLIRQGKLK 434

Query: 376 EFVG 380
            F+G
Sbjct: 447 NFLG 434

BLAST of Lag0038652 vs. NCBI nr
Match: XP_024042801.1 (uncharacterized protein LOC112099618 [Citrus clementina])

HSP 1 Score: 221.9 bits (564), Expect = 1.0e-53
Identity = 121/297 (40.74%), Postives = 183/297 (61.62%), Query Frame = 0

Query: 82  VPNFPQYDGKKDPKQHLDAYRTWMDFPGANEATRCRAFALTLTGLARQWFGKIPRRSIGS 141
           +P    Y GK+D  +HL  YR+WM+  GA+ A  CRAF+LTL   AR+W+ K+   SI S
Sbjct: 1   MPQIKLYGGKRDSTEHLKTYRSWMELQGASGAAMCRAFSLTLIEAARRWYRKLRPGSISS 60

Query: 142 LRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVESYDDGVALT 201
             +L+++ V QF+GAR +Q P    L VKQG  ESL+D I RF+ EV++VE+Y D VALT
Sbjct: 61  FAQLSQILVNQFVGARDQQFPPTYFLLVKQGKDESLKDCITRFNKEVVRVENYSDAVALT 120

Query: 202 AVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESRGMSTSDRRRE 261
            ++ GLQ  +   S+ ++  RT+ E ++RAQ+Y + +EL  +K      RG ++   R  
Sbjct: 121 TIMVGLQPGKFHYSLAKNPARTFTELLSRAQKYSNVDELTNAK------RGANSDSPRVA 180

Query: 262 DKGKRHQAEGRSRSRPEHSSANGRGRPEAKELQGRAEPKSRYDRYTPLTASLEQVLTAIQ 321
           +K K  + + +++ +       G      K LQ      SR+ RYTPL    EQVL  I+
Sbjct: 181 EKRKIKEEQIKNKEKTSRLEKKG-----PKILQ------SRFPRYTPLNLPEEQVLMQIR 240

Query: 322 DTNLLKRPEKLRSGPDRRNRNKYCMFHGDHGHTTLECIQLRDEIETLIREGYLKEFV 379
           + +LL++P+ ++  P+RR+R+KYC +H DH H   +C  L++EI++LI+ GYLKEFV
Sbjct: 241 NLDLLRKPKDIKIAPNRRDRSKYCRYHRDHRHNIEDCFDLKEEIKSLIQRGYLKEFV 280

BLAST of Lag0038652 vs. NCBI nr
Match: XP_030968695.1 (uncharacterized protein LOC115989173 [Quercus lobata])

HSP 1 Score: 220.3 bits (560), Expect = 3.0e-53
Identity = 126/326 (38.65%), Postives = 184/326 (56.44%), Query Frame = 0

Query: 76  VPHKFRVPNFPQYDGKKDPKQHLDAYRTWMDFPGANEATRCRAFALTLTGLARQWFGKIP 135
           +P KF++P+   YDG +DP  H+  ++T M   G  +   CRAF  TL G AR WF KIP
Sbjct: 87  LPSKFKLPSLDSYDGTRDPFDHIAIFKTTMHLQGVPDEIMCRAFPTTLKGPARVWFSKIP 146

Query: 136 RRSIGSLRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVESYD 195
             S+ S  EL+++FV  F+G +  ++   +LLT++QG  ESLR +I RF+ E L V+  D
Sbjct: 147 PSSVSSFEELSKLFVNNFIGGQRHKRSSSSLLTIEQGENESLRSFITRFNREALSVDEVD 206

Query: 196 DGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESRGMST 255
           D + L A  +G+  +  ++ + E +P+T  E +  AQ +++AE+ + +K+          
Sbjct: 207 DKLLLAAFHNGINSDLFIHKLYEKEPQTMAELVHSAQNFMNAEDAIIAKK---------- 266

Query: 256 SDRRREDKGKRHQAEGRSRSRPEHSSANGRGRPE-AKELQGR-AEPKSRYDRYTPLTASL 315
             R+R ++ + H A        E +    +GR E  KE  GR   P  R   YTPL A L
Sbjct: 267 --RKRAERMEAHPAR-----HSEQAPCPKKGRTEDRKERDGRKTGPLGRSQNYTPLNAPL 326

Query: 316 EQVLTAIQDTNLLKRPEKLRSGPDRRNRNKYCMFHGDHGHTTLECIQLRDEIETLIREGY 375
            QVL  I+D   LK PEK++  P++RN+NKYC FH DHGH   EC  L+ +IE LIR+G 
Sbjct: 327 NQVLMQIKDDPSLKWPEKMKGDPNKRNKNKYCRFHRDHGHDMDECYDLKQQIENLIRQGK 386

Query: 376 LKEFVGAIETRGRYQRTKAKEEPTRR 400
           LK FVG   T    ++ K K E + R
Sbjct: 387 LKHFVGRDRTD---EKQKGKMEESSR 392

BLAST of Lag0038652 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 6.9e-64
Identity = 158/389 (40.62%), Postives = 219/389 (56.30%), Query Frame = 0

Query: 14  GPSRKKARRSSPLTQAPGMNTGNNGRSEARQK-SEQGQKRRETSGWLKGEGGASLHRRDH 73
           G S    R S P++   G        SE R    E+G    E    L  +  +       
Sbjct: 130 GKSDHDDRNSEPISLDKGKPADRPESSEKRHSHKEKGFDLEE----LLDQADSPFTEEIM 189

Query: 74  EGEVPHKFRVPNFPQYDGKKDPKQHLDAYRTWMDFPGANEATRCRAFALTLTGLARQWFG 133
             +VP KF++P   Q+D   DP  HLDAYR WMD  G +EA RCR F+ TL G AR WF 
Sbjct: 190 REKVPPKFKLPTVKQFDXTTDPVDHLDAYREWMDIYGVSEAVRCRVFSTTLNGSARIWFR 249

Query: 134 KIPRRSIGSLRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVE 193
           ++ R SI S + LAR FVTQF+G R R +P   LLT+KQ   ESLRDY+ RF+ E LQVE
Sbjct: 250 QLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLRDYVARFNEEKLQVE 309

Query: 194 SYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSKQEERESRG 253
              D V+L A +SG++DE L  S G+  P T+ E ++RAQRY+SA E   SK+E    R 
Sbjct: 310 GLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFYSKREPDGKR- 369

Query: 254 MSTSDRRREDKGKRHQAEGRSRSRPEHSSANGRGRPEAKELQGRAEPKSRYDRYTPLTAS 313
              +D +RE          RS  +P+ S      R E ++   + +P  ++++YTP T  
Sbjct: 370 ---TDPKRE----------RSGDKPQGS------RWEKRDRSSQKDPPRKFEKYTPTTVP 429

Query: 314 LEQVLTAIQDTNLLKRPEKLRSGPDRRNRNKYCMFHGDHGHTTLECIQLRDEIETLIREG 373
           +EQVL  I+D  LLK PE++++   +R++ +YC+FH DHGH T +C  L++E+E LIR G
Sbjct: 430 IEQVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRG 489

Query: 374 YLKEFVGAIETRGRYQRTKAKEEPTRRLR 402
           YLKE+V   E     Q  ++ + P R +R
Sbjct: 490 YLKEYV---EEPKATQNGESDKSPAREIR 491

BLAST of Lag0038652 vs. ExPASy TrEMBL
Match: A0A6J1D9W7 (uncharacterized protein LOC111018708 OS=Momordica charantia OX=3673 GN=LOC111018708 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.5e-53
Identity = 129/362 (35.64%), Postives = 201/362 (55.52%), Query Frame = 0

Query: 43  RQKSEQGQKRRETSGWLKGEGGASLHRRD-HEGEVPHKFRVPNFPQYDGKKDPKQHLDAY 102
           R+  E G    +      G+ G S    D  E  +P KF+ P    YDG KDPK +++ +
Sbjct: 33  RRLKESGSAPAKDDSLNDGDLGESSFTSDVLEAPIPPKFKAPTVKPYDGSKDPKDYVEVF 92

Query: 103 RTWMDFPGANEATRCRAFALTLTGLARQWFGKIPRRSIGSLRELARVFVTQFLGARSRQK 162
              MDF  A++A +CRAF + LTG AR W+ ++P RSI +  +L R F+ QF   +  +K
Sbjct: 93  EGLMDFHAASDAIKCRAFQIALTGSARLWYRRLPARSISTYSQLRREFLAQFSSRQYGKK 152

Query: 163 PQINLLTVKQGPRESLRDYINRFSNEVLQVESYDDGVALTAVISGLQDERLLNSIGESQP 222
            + +L T++Q    +LR+Y+ RF  E L+V    D  A+   ++GL DE L   +GE  P
Sbjct: 153 TETHLATIRQKEGGTLREYVTRFQEEQLKVAHCSDDSAMCYFLTGLADEALTVKLGEKAP 212

Query: 223 RTYVEFMTRAQRYISAEELLKSK---QEERESRGMSTSDRRREDKGKRHQAEGRSRSRPE 282
            T+ E + +A++ I  +ELL++K    + +  RG S  D  R        A+ +S+ +  
Sbjct: 213 TTFAEVLQKAKKVIDGQELLRTKTGRPDRKIGRGRSGKDVER--------ADPKSKDKGS 272

Query: 283 HSSANGRGRPEAKELQGRAEPKSRYDRYTPLTASLEQVLTAIQDT---NLLKRPEKLRSG 342
            SS    GR E +  +        Y+R+TP T  + ++LT I+++    LLKRPEKLR  
Sbjct: 273 FSS----GRAEYRRAESGPTKSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKLRGA 332

Query: 343 PDRRNRNKYCMFHGDHGHTTLECIQLRDEIETLIREGYLKEFVGAIETRGRYQRTKAKEE 398
           P+RR+++KYC FH +HGH T +C +L+ +IE LI++GY K+FVG   T    ++ + K  
Sbjct: 333 PERRSKDKYCRFHREHGHNTSDCWELKRQIEDLIQDGYFKKFVGKPRTSSAEKKEERKRS 382

BLAST of Lag0038652 vs. ExPASy TrEMBL
Match: A0A6J1DS95 (uncharacterized protein LOC111023421 OS=Momordica charantia OX=3673 GN=LOC111023421 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.2e-53
Identity = 123/331 (37.16%), Postives = 189/331 (57.10%), Query Frame = 0

Query: 73  EGEVPHKFRVPNFPQYDGKKDPKQHLDAYRTWMDFPGANEATRCRAFALTLTGLARQWFG 132
           E  +P KF+ P    YDG KDPK +++ +   MDF  A++A +CRAF + LTG AR W+ 
Sbjct: 74  EAPIPPKFKAPTVKPYDGTKDPKDYVEVFEGLMDFQAASDAIKCRAFQIALTGSARLWYR 133

Query: 133 KIPRRSIGSLRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVE 192
           ++P RSI +  +L R F+ QF      +K   +L T++Q   E+LR+Y+ RF  E L+V 
Sbjct: 134 RLPXRSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLKVA 193

Query: 193 SYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSK---QEERE 252
              D  A+   ++GL DE L   +GE  P T+ E + +A++ I  +ELL++K    E + 
Sbjct: 194 HCSDDSAMCYFLTGLADEALTVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTGRPERKI 253

Query: 253 SRGMSTSDRRREDKGKRHQAEGRSRSRPEHSSANGRGRPEAKELQGRAEPKSRYDRYTPL 312
            RG S  D  R        A+ +S+ +   SS    GR E +  +        Y+R+TP 
Sbjct: 254 GRGRSGKDVER--------ADPKSKDKGSFSS----GRAEYRRAENGPTRSRPYERFTPT 313

Query: 313 TASLEQVLTAIQDT---NLLKRPEKLRSGPDRRNRNKYCMFHGDHGHTTLECIQLRDEIE 372
           T  + ++LT I+++    LLKRPEKLR  P+RR+++KYC FH +HGH T +  +L+ +IE
Sbjct: 314 TIPIFEILTNIEESGMEKLLKRPEKLRGAPERRSKDKYCRFHREHGHNTSDFWELKRQIE 373

Query: 373 TLIREGYLKEFVGAIETRGRYQRTKAKEEPT 398
            LI++GY K+FVG   T    ++ + K   T
Sbjct: 374 DLIQDGYFKKFVGKPRTSSAEKKEERKRSRT 392

BLAST of Lag0038652 vs. ExPASy TrEMBL
Match: A0A6J1CKB3 (uncharacterized protein LOC111012081 OS=Momordica charantia OX=3673 GN=LOC111012081 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.6e-52
Identity = 121/331 (36.56%), Postives = 186/331 (56.19%), Query Frame = 0

Query: 73  EGEVPHKFRVPNFPQYDGKKDPKQHLDAYRTWMDFPGANEATRCRAFALTLTGLARQWFG 132
           E  +P KF+ P    YDG KDPK +++ +   MDF   ++A +CRAF + LTG AR W+ 
Sbjct: 48  EAPIPPKFKAPTVKPYDGSKDPKDYVEVFEGLMDFQATSDAIKCRAFQIALTGSARLWYR 107

Query: 133 KIPRRSIGSLRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVE 192
           ++P RSI +  +L R F+ QF      +K   +L T++Q   E+LR+Y+ RF  E L+V 
Sbjct: 108 RLPARSISTYSQLRREFLAQFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLKVA 167

Query: 193 SYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSK---QEERE 252
              D  A+   ++GL DE L   +GE  P T+ E + + ++ I   ELL++K    E + 
Sbjct: 168 HCSDDSAMCYFLTGLADEALTVKLGEEAPSTFTEVLQKTKKVIDGHELLRTKTGRPERKI 227

Query: 253 SRGMSTSDRRREDKGKRHQAEGRSRSRPEHSSANGRGRPEAKELQGRAEPKSRYDRYTPL 312
           SRG S  D  + D         +S+ +   SS    GR E +  +        Y+R+TP 
Sbjct: 228 SRGRSGKDIEKTDP--------KSKDKGSFSS----GRXEYRRAENGPTRSRPYERFTPT 287

Query: 313 TASLEQVLTAIQDT---NLLKRPEKLRSGPDRRNRNKYCMFHGDHGHTTLECIQLRDEIE 372
           T  + ++LT I+++    LLKRPEKLR   +RR+++KYC FH +HGH T +C +L+ +IE
Sbjct: 288 TIPIXEILTXIEESGMEKLLKRPEKLRXXXERRSKDKYCRFHREHGHNTSDCWELKRQIE 347

Query: 373 TLIREGYLKEFVGAIETRGRYQRTKAKEEPT 398
            LI++GY K+FVG   T    ++ + K   T
Sbjct: 348 DLIQDGYFKKFVGKPRTSSAEKKEERKRSRT 366

BLAST of Lag0038652 vs. ExPASy TrEMBL
Match: A0A6J1C7X5 (uncharacterized protein LOC111008813 OS=Momordica charantia OX=3673 GN=LOC111008813 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.1e-52
Identity = 120/331 (36.25%), Postives = 187/331 (56.50%), Query Frame = 0

Query: 73  EGEVPHKFRVPNFPQYDGKKDPKQHLDAYRTWMDFPGANEATRCRAFALTLTGLARQWFG 132
           E  +P KF+ P    YDG KDPK +++ + + MDF  A++A +CRAF + LTG AR W+ 
Sbjct: 63  EAPIPPKFKAPTVKPYDGSKDPKDYVEVFESLMDFQAASDAIKCRAFRIALTGSARLWYR 122

Query: 133 KIPRRSIGSLRELARVFVTQFLGARSRQKPQINLLTVKQGPRESLRDYINRFSNEVLQVE 192
           ++P  SI +  +L R F+  F      +K   +L T++Q   E+LR+Y+ RF  E L+V 
Sbjct: 123 RLPAXSISTYSQLRREFLAXFSSRHYDKKTATHLATIRQKEGETLREYVTRFQEEQLKVA 182

Query: 193 SYDDGVALTAVISGLQDERLLNSIGESQPRTYVEFMTRAQRYISAEELLKSK---QEERE 252
              D  A+   ++GL DE L   +GE  P T+ E + +A++ I  +ELL++K    E + 
Sbjct: 183 HCSDDSAMCYFLTGLADEALTVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTGRPERKI 242

Query: 253 SRGMSTSDRRREDKGKRHQAEGRSRSRPEHSSANGRGRPEAKELQGRAEPKSRYDRYTPL 312
            RG S  D           A+ +S+ +   SS    GR E +  +        Y+R+TP 
Sbjct: 243 GRGRSGKD--------IENADPKSKDKGSFSS----GRAEYRRAENGPTRSRPYERFTPT 302

Query: 313 TASLEQVLTAIQDT---NLLKRPEKLRSGPDRRNRNKYCMFHGDHGHTTLECIQLRDEIE 372
           T  + ++LT I+++    LLKRPEKLR  P+RR+++KYC FH +HGH T +  +L+ +IE
Sbjct: 303 TIPISEILTNIEESGMEKLLKRPEKLRGAPERRSKDKYCRFHREHGHNTSDYWELKRQIE 362

Query: 373 TLIREGYLKEFVGAIETRGRYQRTKAKEEPT 398
            LI++GY K+FVG   T    ++ + K   T
Sbjct: 363 NLIQDGYFKKFVGKPRTSSAEKKEERKRSRT 381

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022158830.11.4e-6340.62uncharacterized protein LOC111025293 [Momordica charantia][more]
XP_024041095.13.7e-5939.88uncharacterized protein LOC112098853 [Citrus clementina][more]
XP_023916366.14.6e-5439.14uncharacterized protein LOC112027956 [Quercus suber][more]
XP_024042801.11.0e-5340.74uncharacterized protein LOC112099618 [Citrus clementina][more]
XP_030968695.13.0e-5338.65uncharacterized protein LOC115989173 [Quercus lobata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DWY06.9e-6440.62uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1D9W72.5e-5335.64uncharacterized protein LOC111018708 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1DS953.2e-5337.16uncharacterized protein LOC111023421 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1CKB31.6e-5236.56uncharacterized protein LOC111012081 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A6J1C7X52.1e-5236.25uncharacterized protein LOC111008813 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 118..209
e-value: 2.4E-10
score: 40.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..303
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0038652.1Lag0038652.1mRNA