Lag0038641 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0038641
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Ribonuclease H
Location	chr2: 22147712 .. 22148780 (-)
RNA-Seq Expression	Lag0038641
Synteny	Lag0038641

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCTAGTAATTGTATCTGGTCAACAGGATATCTTGGTTTCTAGGTCAGCTTCAATGCCATATATTGATGCAGCAGAGGAAGCTTTTGAGTCATCATTTCAAACATTTGAGGTGGCTAGTGCCACGGATCTATATGGAGAAAGCAAGAAATCTAAGTCTCGATCTTCAGTCATGACATTCAAGGAAAGCAACAGTCGTTTAGATGATGTTATAAGCCTATCAAAAAATACAAAAAGATTTGGGCTTGGGTATAAGCCGGATAAAGCAGATATGATTAGGGTACAGAAGCGAGAAAAAGAGAGGCGTTTGGCCAGATTTGAAAGTCGTGAACCAGAATATGGAGAAAAAGTCATTCCTCATCTCTACCACTCGTTTGAAAGTGTTGGTATAATTCGTCTAAGTGATTTTGCAGTTGCAATAGTGACTAAAGAGGAAGAAATGGGTCCATGGATCTACCCGTGCCCAGAAAACTTCGAGCTCAACAATTGGGGTACTATTGAATTACCATCATTTGCTGTTAAGATGTCAAAGTAATTGACCACTTTTTATTGTTTTTAGCAATTTCAATTTTCAATTTCAAGTTAGGTTAGTCATTTTACTCATTTCATTTTTCAGACTTCCTTCTATGTGTTCAAGTAAATTTCATCATTCAATGAAGATTTTAGTTCATTTCCCTTTGCTATTGCATATTACACTCTCCATGGCAAAACATTTACTCTTCTTTTCTTTTCTTTTCTCTCTATGTCAAATTATCAACATCTTAAGTAGTAATACTGAGATTGAATGTGCAAACGATTCTCAATACGAACTTGACATTCCTATACACAATGTTGAGTCTGACGAGGAAGAAGAAGATCTTGAACCTAGTGCTGAGTTGTTAGAAATGATAGAGGAAGCGGAAAAAGCGTTGGGCCTCCATGAAGAGTTAACAGAGATAATTAACCTGGGATCACAAGCGGAAGTCAAGGAGGTTCAAATTGGCACTAATGTCTCTACAGAAACTCGCAAAAAGCTTAGGCCCCGTTTGGTTCGTGATCCGTTTTCGTTTTTATGTTTTCGAAAATAA

mRNA sequence

ATGAGCCTAGTAATTGTATCTGGTCAACAGGATATCTTGGTTTCTAGGTCAGCTTCAATGCCATATATTGATGCAGCAGAGGAAGCTTTTGAGTCATCATTTCAAACATTTGAGGTGGCTAGTGCCACGGATCTATATGGAGAAAGCAAGAAATCTAAGTCTCGATCTTCAGTCATGACATTCAAGGAAAGCAACAGTCGTTTAGATGATGTTATAAGCCTATCAAAAAATACAAAAAGATTTGGGCTTGGGTATAAGCCGGATAAAGCAGATATGATTAGGGTACAGAAGCGAGAAAAAGAGAGGCGTTTGGCCAGATTTGAAAGTCGTGAACCAGAATATGGAGAAAAAGTCATTCCTCATCTCTACCACTCGTTTGAAAGTGTTGGTATAATTCGTCTAAGTGATTTTGCAGTTGCAATAGTGACTAAAGAGGAAGAAATGGGTCCATGGATCTACCCGTGCCCAGAAAACTTCGAGCTCAACAATTGGGGTACTATTGAATTACCATCATTTGCTGTTAAGATGTCAAATAATACTGAGATTGAATGTGCAAACGATTCTCAATACGAACTTGACATTCCTATACACAATGTTGAGTCTGACGAGGAAGAAGAAGATCTTGAACCTAGTGCTGAGTTGTTAGAAATGATAGAGGAAGCGGAAAAAGCGTTGGGCCTCCATGAAGAGTTAACAGAGATAATTAACCTGGGATCACAAGCGGAAGTCAAGGAGGTTCAAATTGGCACTAATGTCTCTACAGAAACTCGCAAAAAGCTTAGGCCCCGTTTGGTTCGTGATCCGTTTTCGTTTTTATGTTTTCGAAAATAA

Coding sequence (CDS)

ATGAGCCTAGTAATTGTATCTGGTCAACAGGATATCTTGGTTTCTAGGTCAGCTTCAATGCCATATATTGATGCAGCAGAGGAAGCTTTTGAGTCATCATTTCAAACATTTGAGGTGGCTAGTGCCACGGATCTATATGGAGAAAGCAAGAAATCTAAGTCTCGATCTTCAGTCATGACATTCAAGGAAAGCAACAGTCGTTTAGATGATGTTATAAGCCTATCAAAAAATACAAAAAGATTTGGGCTTGGGTATAAGCCGGATAAAGCAGATATGATTAGGGTACAGAAGCGAGAAAAAGAGAGGCGTTTGGCCAGATTTGAAAGTCGTGAACCAGAATATGGAGAAAAAGTCATTCCTCATCTCTACCACTCGTTTGAAAGTGTTGGTATAATTCGTCTAAGTGATTTTGCAGTTGCAATAGTGACTAAAGAGGAAGAAATGGGTCCATGGATCTACCCGTGCCCAGAAAACTTCGAGCTCAACAATTGGGGTACTATTGAATTACCATCATTTGCTGTTAAGATGTCAAATAATACTGAGATTGAATGTGCAAACGATTCTCAATACGAACTTGACATTCCTATACACAATGTTGAGTCTGACGAGGAAGAAGAAGATCTTGAACCTAGTGCTGAGTTGTTAGAAATGATAGAGGAAGCGGAAAAAGCGTTGGGCCTCCATGAAGAGTTAACAGAGATAATTAACCTGGGATCACAAGCGGAAGTCAAGGAGGTTCAAATTGGCACTAATGTCTCTACAGAAACTCGCAAAAAGCTTAGGCCCCGTTTGGTTCGTGATCCGTTTTCGTTTTTATGTTTTCGAAAATAA

Protein sequence

MSLVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKERRLARFESREPEYGEKVIPHLYHSFESVGIIRLSDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSNNTEIECANDSQYELDIPIHNVESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLGSQAEVKEVQIGTNVSTETRKKLRPRLVRDPFSFLCFRK

Homology

[Close]

BLAST of Lag0038641 vs. NCBI nr
Match: XP_022147189.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia])

HSP 1 Score: 288.1 bits (736), Expect = 8.0e-74
Identity = 151/262 (57.63%), Postives = 197/262 (75.19%), Query Frame = 0


Query: 3    LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFK 62
            LVI+SGQ+DILVSR ASM Y++ AEEAFESSFQ+FE+A+AT L+G+  + K R     FK
Sbjct: 941  LVIISGQEDILVSRFASMSYVEVAEEAFESSFQSFEIANATTLHGKFGRPKPRLLETAFK 1000

Query: 63   ESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKERRLARFESREPEYGEKVIPHL 122
              N  LD ++ ++KNTK+FGLGYKP + D+IRV+  EK +RL+RFE+ E +Y  +++P L
Sbjct: 1001 GDNGSLDKLLRMAKNTKKFGLGYKPSRGDIIRVRSLEKAKRLSRFENEERDYPRRIVPPL 1060

Query: 123  YHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSN 182
             HSF S G I      S    A+  + E++GP++Y CP+ FEL+NW  I+LPSF    SN
Sbjct: 1061 THSFRSAGTIHQEYDESSVVAAVTEEREQVGPFVYLCPDGFELSNWSVIKLPSFVNNKSN 1120

Query: 183  NTEIECANDSQYELDIPIHNVESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLG 242
            NTEIEC NDS+YELD PI+ +ESDEE +D EPSAELL M+EE EK LG HEELTE +NLG
Sbjct: 1121 NTEIECDNDSKYELDTPIYIIESDEEIDD-EPSAELLRMLEEEEKMLGPHEELTETLNLG 1180

Query: 243  SQAEVKEVQIGTNVSTETRKKL 261
            SQAE KE++IGT++S+E+RKKL
Sbjct: 1181 SQAEAKEIKIGTHMSSESRKKL 1201

[Close]

BLAST of Lag0038641 vs. NCBI nr
Match: XP_022147181.1 (uncharacterized protein LOC111016192 [Momordica charantia])

HSP 1 Score: 287.0 bits (733), Expect = 1.8e-73
Identity = 152/262 (58.02%), Postives = 194/262 (74.05%), Query Frame = 0


Query: 3   LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFK 62
           LVI+ GQ+DILVSR ASMPY++AAEEAFESSFQ+FE+A+AT L+G+  + K R     FK
Sbjct: 148 LVIIXGQEDILVSRLASMPYVEAAEEAFESSFQSFEIANATTLHGKFGRPKPRLLETAFK 207

Query: 63  ESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKERRLARFESREPEYGEKVIPHL 122
             N+ LD ++ ++KNTK+FGLGYKP + D+IRV   EK +RL+RFE+ E +Y  + +P L
Sbjct: 208 GDNASLDKLLMMAKNTKKFGLGYKPSRGDIIRVWSLEKAKRLSRFENEERDYPRRTVPPL 267

Query: 123 YHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSN 182
            HSF S GII      S     +  + E++GP++YPCP+ FEL+NW  +ELPSF    SN
Sbjct: 268 SHSFRSAGIIHQEYDESSVVAGVTEEREQVGPFVYPCPDGFELSNWSVLELPSFVNNKSN 327

Query: 183 NTEIECANDSQYELDIPIHNVESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLG 242
             EIEC NDS+YELD PI+N+ESDEE +D E S ELL M+ E EK LG HEELTE INLG
Sbjct: 328 XXEIECDNDSKYELDTPIYNIESDEEIDD-EFSXELLRMLAEEEKMLGPHEELTETINLG 387

Query: 243 SQAEVKEVQIGTNVSTETRKKL 261
           SQAE KEV+IGTN+S+E+RKKL
Sbjct: 388 SQAEAKEVKIGTNMSSESRKKL 408

[Close]

BLAST of Lag0038641 vs. NCBI nr
Match: XP_022150030.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111018303 [Momordica charantia])

HSP 1 Score: 272.7 bits (696), Expect = 3.5e-69
Identity = 147/262 (56.11%), Postives = 194/262 (74.05%), Query Frame = 0


Query: 3   LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFK 62
           LVI+SGQ+DILVSR ASMPY++AAEEAFESSFQ+FE+A+AT L+G+  + K R     FK
Sbjct: 373 LVIISGQEDILVSRLASMPYVEAAEEAFESSFQSFEIANATTLHGKFGRPKPRLLEAAFK 432

Query: 63  ESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKERRLARFESREPEYGEKVIPHL 122
            +N  LD ++ ++KNT+RFGLGYKP++ D+IRV+  EK +RL+RFE+ E +Y  + +P L
Sbjct: 433 VNNGSLDKLLRMAKNTRRFGLGYKPNRGDIIRVRSMEKAKRLSRFENGERDYSRRTVPPL 492

Query: 123 YHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSN 182
            HS  S G I      S  A A+  + E++ P++YPCP+ F+L+NW            S 
Sbjct: 493 SHSLRSAGTIHQEYDESSVAAAVTEEREQVEPFVYPCPDGFKLSNW------------SV 552

Query: 183 NTEIECANDSQYELDIPIHNVESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLG 242
           NTEIEC NDS+YELD PI+N+ESDEE +D EPSAELL M+EE EK LG HEELTE +NLG
Sbjct: 553 NTEIECDNDSKYELDTPIYNIESDEEIDD-EPSAELLRMLEEEEKMLGPHEELTETLNLG 612

Query: 243 SQAEVKEVQIGTNVSTETRKKL 261
           SQAE KE++IGT++S+E+RKKL
Sbjct: 613 SQAEAKEIKIGTHMSSESRKKL 621

[Close]

BLAST of Lag0038641 vs. NCBI nr
Match: XP_022143495.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia])

HSP 1 Score: 272.3 bits (695), Expect = 4.5e-69
Identity = 147/262 (56.11%), Postives = 192/262 (73.28%), Query Frame = 0


Query: 3    LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFK 62
            LVI+SGQ+DILVSR ASMPY++AAEEAFESSFQ+FE+A+AT L+G+  + K R     FK
Sbjct: 843  LVIISGQEDILVSRLASMPYVEAAEEAFESSFQSFEIANATTLHGKFGRPKPRLLETAFK 902

Query: 63   ESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKERRLARFESREPEYGEKVIPHL 122
              N  LD ++ ++KNTK+FGLGYKP + D+IRV+  EK +RL+RFE+ E +Y  + +P L
Sbjct: 903  GDNESLDKLLRMAKNTKKFGLGYKPSRGDIIRVRSLEKAKRLSRFENEERDYPRRTVPPL 962

Query: 123  YHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSN 182
             HSF S G I      S    A+  + E++ P++YPCP+ FEL+NW            S 
Sbjct: 963  SHSFRSAGTIHQEYDGSSVVAAVTEEREQVRPFVYPCPDGFELSNW------------SV 1022

Query: 183  NTEIECANDSQYELDIPIHNVESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLG 242
            NTEIEC NDS+YELD PI+N+ESD+E +D EPSAELL M+EE EK LG HEELTE +NLG
Sbjct: 1023 NTEIECDNDSKYELDTPIYNIESDKEIDD-EPSAELLRMLEEEEKMLGPHEELTETLNLG 1082

Query: 243  SQAEVKEVQIGTNVSTETRKKL 261
            SQAE KE++IGT++S+E+RKKL
Sbjct: 1083 SQAEAKEIKIGTHMSSESRKKL 1091

[Close]

BLAST of Lag0038641 vs. NCBI nr
Match: XP_022155744.1 (uncharacterized protein LOC111022791 [Momordica charantia])

HSP 1 Score: 182.2 bits (461), Expect = 6.2e-42
Identity = 91/174 (52.30%), Postives = 124/174 (71.26%), Query Frame = 0


Query: 3   LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFK 62
           LVI+SGQ+DILVSR ASMPY++A EEAFESSFQ+FE+ +AT L+G+  + KSR     FK
Sbjct: 357 LVIISGQEDILVSRLASMPYVEATEEAFESSFQSFEIENATTLHGKFGRPKSRLLETAFK 416

Query: 63  ESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKERRLARFESREPEYGEKVIPHL 122
             N  LD ++ ++KNTK+FGLGYK  + D+IRV+  EK +RL+RFE+ E +Y  +++P L
Sbjct: 417 GDNESLDKLLRMAKNTKKFGLGYKLSRGDIIRVRSLEKAKRLSRFENEERDYPRRIVPPL 476

Query: 123 YHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSF 173
            HSF S G I      S    A+  + E++GP++Y CP+ FEL+NW  IELPSF
Sbjct: 477 THSFRSAGTIHQEYDESSVVAAVTEEREQVGPFVYLCPDGFELSNWSVIELPSF 530

[Close]

BLAST of Lag0038641 vs. ExPASy TrEMBL
Match: A0A6J1D099 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 3.9e-74
Identity = 151/262 (57.63%), Postives = 197/262 (75.19%), Query Frame = 0


Query: 3    LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFK 62
            LVI+SGQ+DILVSR ASM Y++ AEEAFESSFQ+FE+A+AT L+G+  + K R     FK
Sbjct: 941  LVIISGQEDILVSRFASMSYVEVAEEAFESSFQSFEIANATTLHGKFGRPKPRLLETAFK 1000

Query: 63   ESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKERRLARFESREPEYGEKVIPHL 122
              N  LD ++ ++KNTK+FGLGYKP + D+IRV+  EK +RL+RFE+ E +Y  +++P L
Sbjct: 1001 GDNGSLDKLLRMAKNTKKFGLGYKPSRGDIIRVRSLEKAKRLSRFENEERDYPRRIVPPL 1060

Query: 123  YHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSN 182
             HSF S G I      S    A+  + E++GP++Y CP+ FEL+NW  I+LPSF    SN
Sbjct: 1061 THSFRSAGTIHQEYDESSVVAAVTEEREQVGPFVYLCPDGFELSNWSVIKLPSFVNNKSN 1120

Query: 183  NTEIECANDSQYELDIPIHNVESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLG 242
            NTEIEC NDS+YELD PI+ +ESDEE +D EPSAELL M+EE EK LG HEELTE +NLG
Sbjct: 1121 NTEIECDNDSKYELDTPIYIIESDEEIDD-EPSAELLRMLEEEEKMLGPHEELTETLNLG 1180

Query: 243  SQAEVKEVQIGTNVSTETRKKL 261
            SQAE KE++IGT++S+E+RKKL
Sbjct: 1181 SQAEAKEIKIGTHMSSESRKKL 1201

[Close]

BLAST of Lag0038641 vs. ExPASy TrEMBL
Match: A0A6J1D1K4 (uncharacterized protein LOC111016192 OS=Momordica charantia OX=3673 GN=LOC111016192 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 8.6e-74
Identity = 152/262 (58.02%), Postives = 194/262 (74.05%), Query Frame = 0


Query: 3   LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFK 62
           LVI+ GQ+DILVSR ASMPY++AAEEAFESSFQ+FE+A+AT L+G+  + K R     FK
Sbjct: 148 LVIIXGQEDILVSRLASMPYVEAAEEAFESSFQSFEIANATTLHGKFGRPKPRLLETAFK 207

Query: 63  ESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKERRLARFESREPEYGEKVIPHL 122
             N+ LD ++ ++KNTK+FGLGYKP + D+IRV   EK +RL+RFE+ E +Y  + +P L
Sbjct: 208 GDNASLDKLLMMAKNTKKFGLGYKPSRGDIIRVWSLEKAKRLSRFENEERDYPRRTVPPL 267

Query: 123 YHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSN 182
            HSF S GII      S     +  + E++GP++YPCP+ FEL+NW  +ELPSF    SN
Sbjct: 268 SHSFRSAGIIHQEYDESSVVAGVTEEREQVGPFVYPCPDGFELSNWSVLELPSFVNNKSN 327

Query: 183 NTEIECANDSQYELDIPIHNVESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLG 242
             EIEC NDS+YELD PI+N+ESDEE +D E S ELL M+ E EK LG HEELTE INLG
Sbjct: 328 XXEIECDNDSKYELDTPIYNIESDEEIDD-EFSXELLRMLAEEEKMLGPHEELTETINLG 387

Query: 243 SQAEVKEVQIGTNVSTETRKKL 261
           SQAE KEV+IGTN+S+E+RKKL
Sbjct: 388 SQAEAKEVKIGTNMSSESRKKL 408

[Close]

BLAST of Lag0038641 vs. ExPASy TrEMBL
Match: A0A6J1D7C7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111018303 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.7e-69
Identity = 147/262 (56.11%), Postives = 194/262 (74.05%), Query Frame = 0


Query: 3   LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFK 62
           LVI+SGQ+DILVSR ASMPY++AAEEAFESSFQ+FE+A+AT L+G+  + K R     FK
Sbjct: 373 LVIISGQEDILVSRLASMPYVEAAEEAFESSFQSFEIANATTLHGKFGRPKPRLLEAAFK 432

Query: 63  ESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKERRLARFESREPEYGEKVIPHL 122
            +N  LD ++ ++KNT+RFGLGYKP++ D+IRV+  EK +RL+RFE+ E +Y  + +P L
Sbjct: 433 VNNGSLDKLLRMAKNTRRFGLGYKPNRGDIIRVRSMEKAKRLSRFENGERDYSRRTVPPL 492

Query: 123 YHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSN 182
            HS  S G I      S  A A+  + E++ P++YPCP+ F+L+NW            S 
Sbjct: 493 SHSLRSAGTIHQEYDESSVAAAVTEEREQVEPFVYPCPDGFKLSNW------------SV 552

Query: 183 NTEIECANDSQYELDIPIHNVESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLG 242
           NTEIEC NDS+YELD PI+N+ESDEE +D EPSAELL M+EE EK LG HEELTE +NLG
Sbjct: 553 NTEIECDNDSKYELDTPIYNIESDEEIDD-EPSAELLRMLEEEEKMLGPHEELTETLNLG 612

Query: 243 SQAEVKEVQIGTNVSTETRKKL 261
           SQAE KE++IGT++S+E+RKKL
Sbjct: 613 SQAEAKEIKIGTHMSSESRKKL 621

[Close]

BLAST of Lag0038641 vs. ExPASy TrEMBL
Match: A0A6J1CNY7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 2.2e-69
Identity = 147/262 (56.11%), Postives = 192/262 (73.28%), Query Frame = 0


Query: 3    LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFK 62
            LVI+SGQ+DILVSR ASMPY++AAEEAFESSFQ+FE+A+AT L+G+  + K R     FK
Sbjct: 843  LVIISGQEDILVSRLASMPYVEAAEEAFESSFQSFEIANATTLHGKFGRPKPRLLETAFK 902

Query: 63   ESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKERRLARFESREPEYGEKVIPHL 122
              N  LD ++ ++KNTK+FGLGYKP + D+IRV+  EK +RL+RFE+ E +Y  + +P L
Sbjct: 903  GDNESLDKLLRMAKNTKKFGLGYKPSRGDIIRVRSLEKAKRLSRFENEERDYPRRTVPPL 962

Query: 123  YHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSN 182
             HSF S G I      S    A+  + E++ P++YPCP+ FEL+NW            S 
Sbjct: 963  SHSFRSAGTIHQEYDGSSVVAAVTEEREQVRPFVYPCPDGFELSNW------------SV 1022

Query: 183  NTEIECANDSQYELDIPIHNVESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLG 242
            NTEIEC NDS+YELD PI+N+ESD+E +D EPSAELL M+EE EK LG HEELTE +NLG
Sbjct: 1023 NTEIECDNDSKYELDTPIYNIESDKEIDD-EPSAELLRMLEEEEKMLGPHEELTETLNLG 1082

Query: 243  SQAEVKEVQIGTNVSTETRKKL 261
            SQAE KE++IGT++S+E+RKKL
Sbjct: 1083 SQAEAKEIKIGTHMSSESRKKL 1091

[Close]

BLAST of Lag0038641 vs. ExPASy TrEMBL
Match: A0A6J1DR66 (uncharacterized protein LOC111022791 OS=Momordica charantia OX=3673 GN=LOC111022791 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.0e-42
Identity = 91/174 (52.30%), Postives = 124/174 (71.26%), Query Frame = 0


Query: 3   LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFK 62
           LVI+SGQ+DILVSR ASMPY++A EEAFESSFQ+FE+ +AT L+G+  + KSR     FK
Sbjct: 357 LVIISGQEDILVSRLASMPYVEATEEAFESSFQSFEIENATTLHGKFGRPKSRLLETAFK 416

Query: 63  ESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKERRLARFESREPEYGEKVIPHL 122
             N  LD ++ ++KNTK+FGLGYK  + D+IRV+  EK +RL+RFE+ E +Y  +++P L
Sbjct: 417 GDNESLDKLLRMAKNTKKFGLGYKLSRGDIIRVRSLEKAKRLSRFENEERDYPRRIVPPL 476

Query: 123 YHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSF 173
            HSF S G I      S    A+  + E++GP++Y CP+ FEL+NW  IELPSF
Sbjct: 477 THSFRSAGTIHQEYDESSVVAAVTEEREQVGPFVYLCPDGFELSNWSVIELPSF 530

The following BLAST results are available for this feature:

BLAST of Lag0038641 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147189.1	8.0e-74	57.63	LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]	[more]
XP_022147181.1	1.8e-73	58.02	uncharacterized protein LOC111016192 [Momordica charantia]	[more]
XP_022150030.1	3.5e-69	56.11	LOW QUALITY PROTEIN: uncharacterized protein LOC111018303 [Momordica charantia]	[more]
XP_022143495.1	4.5e-69	56.11	LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]	[more]
XP_022155744.1	6.2e-42	52.30	uncharacterized protein LOC111022791 [Momordica charantia]	[more]

BLAST of Lag0038641 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0038641 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D099	3.9e-74	57.63	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1	[more]
A0A6J1D1K4	8.6e-74	58.02	uncharacterized protein LOC111016192 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1D7C7	1.7e-69	56.11	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111018303 PE=4 SV=1	[more]
A0A6J1CNY7	2.2e-69	56.11	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1	[more]
A0A6J1DR66	3.0e-42	52.30	uncharacterized protein LOC111022791 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of Lag0038641 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 90..110
None	No IPR available	PANTHER	PTHR24559:SF322	RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE), RIBONUCLEASE H-LIKE PROTEIN	coord: 3..260
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 3..260

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0038641.1	Lag0038641.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0034061	DNA polymerase activity
molecular_function	GO:0003676	nucleic acid binding