Lag0038631 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0038631
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Ribonuclease H
Location	chr2: 21896086 .. 21901803 (+)
RNA-Seq Expression	Lag0038631
Synteny	Lag0038631

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAAATTTGTTATCTGTTTCAGAGTAAGTGCTCACACGATTGCATTATGATTTACTCTGTGATTGTTGTGTTTTGTTTACTTGATTTCGAATCTTTTTGCTGCAATGTGAAAGAACCTGAGGTAGATCTAGGATTGTTTGAGAAAACGTGAAGAATTGCTTTCTATGCTTAAAACAAACGTATTTGCAGATTTTTTTTTTCATTATCTGTTTCAGAGCAAGTTAAGTTTTGAGTTTTGAGTTTTGAGTTCAGGATAAATTTATGAGTTTTGAGCTTCCCAATACATCTTTGAATTCTTTTCCTTTGCACACTTCTACTTTCCTCGGAAACTATCAATGAAATCAACACAAAGTCGAATTGGATTACAATCCTAGGTAATTATCGATTTATTGTACTCTGATTTTGTTATATATGGATTTCTTTTTTAAAAATTGCCATGTTTACAATATTTGATCTAACTCGTTTGCAGTTGCATCTTGTAAGAGAACCTTTTGTAGCTCTGAAATTACCATATCAATGGCTCTCTTTCGAATCTCTTGCTCCCGATCATCATCATTTCATCTCAGGATCTCCACCTTATCTACCTTGTAGCTAAGTATAATCTCTTCTGCTGGTCTATTCTACAACCATCTGCAGAAAAACAATGGTAATGTGGAGAAAACCCTTGCTACTGTAAAGACCAAGTTGGATTCTAGGTGTGTCGACGAAGTGTTGCATAAATGTTCCTTCGAACTATCGCAAATGGGTCTTAGATTTTTTATATGGGTTGGTCCACAACTTAATTATAGGCATAGTTCTTTTATGTACAGTACAACTTGTGAAATGATTGGAATTAATCGAAGCCCATGCTTGCTTTTTAATGTTATTGAAGATTATAGAAGGGAGGGTTGCCTTGTTGATATTAGGATGTTTAAGGTTATTTTAAATTTGTGTAAAGAAGCCAAGCTTGCCAAAGAGTCTTTGTCGATATTAGGGAAAGTGCCTGAATTTCATTTGCAGGCTGACACTACAATGTATAATCTGATTATAAGGTTATTTACTGAGTTTAAATTTATGAGTTTTGAGTTCATGTCCTAAGTTAAGTTTTAAGTGAATGTGTTTGTAATTTTTGTTTTGGAAAATGTTATTTAGATAGTTTTGTAACTTTTATTTACTTAGTAAAGTTAGATTAATTTGGTTCGTTTTGTTAAACTTGATGTTATGCTTATAAATATGTGTTCGTTATAGTTTGATGAGTTTATTATTTGTTTACTTAGTAAAGTTAGAGATGCTACTTCAATATCTTCATAAGACCCAAACCACAGTGATACTTGGGATTATCAATGAACACATCAACTTCTAAGGTCTCTTGCCTTTTCACACTTGCTTCACATTGTTTTGTTTTTATGCAAGCTCTAGGTGTTTTATCTTTTAATCTCTATTGATTCTTCTTGCTATTGATTTGTTGTGTTGATTTCTTTCAGTTCAATGGAGGTGGAACAATTTGTTCTTGAAGACTTGAGAAATCGTGTGCAGTTGAGTTATGTTGTCCTGCCATAAGTCAACTTTTATACCTTCATTAATACACACAACGGGTATCTATCTAGTTTCCTTTCTGTCTCTGTTAACGCTTAACAGTTTATTCAGTCTCAATGTGCATGCTGTTGATATCATCGATTCTATGTAGTTTAAACTGTTCGTCAATATCACATGATGGAACTTTAGTTGTTGGTGGATTTTCAGACTCTTCTTTGAAGGTAAGTCTTCTTTTAAAGTTACTTAAAACAACCTAATTATTGGTTGCTCACCTCCAAATCCTTTTTAGGTGGCTTGTGGAGAGTAAGGGTTATTATACAACTTTCACATATCCTTTTTAGGTGGCTTGTGGTGAGCAAAGAATTGTCTCTTGCAAGTTTCACTGAATTTACTGAAGAATCAAAAGCTGATAAGCTGCTGGGTGGTGGAATAGGTTCAAACCTTTTCTCATTAATGCATTTGGCATCATTTCCTATCTTGCTTAGACAACTTCAACCGTTATTAAGTTGGATTTTCTGATTTCAACTTGTGGACCTTGTGTTCTCTTGATTGCATTTCATAACTTTAAAAATGAAAAATGTTCCTGTTCATAATTTTTGCATTTCATAACCACGGTTAATAACTTTTTGTAATTTGATAAAGTTTTGATTAACCTTTGAATTATAATTAGTCTTTGTGAGGCAGAAACAAAGTAAAAACAAATAAAAACGTTGAAGGATTTTTAAAGTTATTACGTTTTTTTTACTTTAAGATGGCAACTGGGATGATATTGGTTCATATATCTTATATACATGTAGGTGGAGTGCAGCTGCCAGGTAGTTGGACACTTGATTGGATTCTGGAACTAGAAGGATAGGACTCAAAAGGTTTGTATTATGAGTAATGTATAAAATGAGTGTACTGAATGACCTTTTAAGTATGATGTCGTCTGTATTGGCAAATAAAACTACTATATTTCAAAGATGATTTAACACAACTTAGAAAACAATTATCTACAAGGTTGCATTATAAATTTATCCTTAAACTTGAATGGTGCAAGTGTAAGTTACTTTTTTTGAACTATGAATTGCGATTTTAGGTAGAAGTAGAACCATCAAGAATCATGACAAAAATAAAGGGCTTAGAAGTAATGAATTCAATACATGATGACCACTTACCTATGATTTAAAAACCTTGTCTTTGTCTCCTTGCATATTTGATTATGAATCATAAATTACAAAGTGGACCTCTTTTAGCCTTTAAAGTTTCACATGGTGGTGGTTGGTATGTGTTGACAAGCATCTTATTTGGATTATTCCCTCCAACTTGTCCACTGGCTGCTCATTTTTTATGTTTTTCCATTAGTTCTCAAATATCTCTCTCTATTTATGGTTGTGTTTACTCACACGTGTATGTTATAACTAGAGTTGATATTGTGTTTAATAAGCACAAATGAAAAGATGTGAGATTTTGCCCTCTGCATTAGTAGGTTAGGTGATATACAATCTTCGTCTTTTCTTTTATCTCGAAAAGAAAAGTTATTGGATTATTTTCTTGAGTTTAGTGGGAGAGGTGTTGAGAATTACTTGGAGGGGTTGAGAAATACTCGAATTATGATTTCAAATTGGTTGTCTTAGTTTATGTTTTTAGTTGAGTTTAGGTGGAAGTTGAGAAGTACTTGAATTAAGTTTTGAAATTGTTTGTGTTAGTTTATAAATTTAGTTGAGTTGGAGGTTGCGAAATACTTGGTTATGCTTTGAAATTGTTTATTTATGTTGGTTTAAAAGTTTACTTTAGTTGGTGGTTGAGAAATACATGTGTTATAGCTTTGAAATTGTTTGTGTGAGTTTATGTTTTTAGTTGGAACTTTTTTTGAAACTTTTTTCTGAGTGATTTTAGTAAAGCTTGTGCATTTTTTATGCATTATGTTCCATGTTTGTTTGTTAAATTGAGTAGGCATTAGAAGCAAAGTTGGGAGCCAAGACACTCAAATCACTACTTTGCTTCAGGTTGGTAATGCTTCTTTACTTTTACACTAATGCATATTACTCCTTGAGAATGGTCGTGTAATGCATCTTGTAGTTCTTTTATGGATTGGTAATTGGCTTCTTGCTTGTAAGACAAAATTGAAGATTATATACTTAAAGTGTGCAGTGAAACCCTTTAAGATTAGATTATACACTTTAATGAAATTTAAAGTGTGCAATGATGGTCGTGTAATGCATCTTGTAGTTCTTTTCCAGGCTTGATTGTTGATTATTTGTGTTATCTTACCAAACTTTGCTTTTAATCTTTTGGTATTTTGTGGAGATTTGTAGAGAAGTGATGTTTTAATTGGTTGTTGTTTGCTTGGACTTTGTTCTTAGGGATTGAAGATCTGGAACCATTTTGTTGTTCTTAGGGGATTGAATCATAATGAAAAGTTTGTTTCTTGTTTAGTTTTAGGATATTTGAGACCTTGTTGTGAACCTGAAGTATTGTGAGGTTGTAGTTGGATGATTTTTTTCATATAGAAGTGTGTTTATCTTGTTTAACAAGTTTAAAAATTTTTGGGTTAGTCATATGTATGTCGTTATGCTGTCGAAATTTTTAGAGCTACCAAGTTAGAATTAGGATAGATGATTTAGTAATGTCTCTAGGTTAAGTATAGAAACCTAGAGCATTACAGGTTCTCTGAAGGGGTTAAACTTGATATCTTGAAGTTTGTAAGCTTTTGGAGTTTATTGAGTTTTCTAACAATTTTTTCCAATACTCATCGAGATTGGTAGTTTTTTTTTGTGTATTTTATTGTTAACTAAATTTGTTTTTCTTAGGTTCTTCGAGTTGTTGGACATATGTTTGTTATGTGAGTTCTTGTTTTGGTGTTGTATCGAACCTAATTACAATTTGTTTTTCTTAGGTTCTTCAAGTTTGATGTACGAGCAAAATTATGGTGACAGGAATGAAAGCGGTATGTACGAGAATTTTTGTTTTTTAGTGTAGATGTAGACTTTAAATCATAGGTGTTTAGTAATTTTGAGGCTCTTAAGTGTAAGTGTTTGTAATTTTATTTTTATATCAAACTTATATGAATAAAAATTGCATGAACAAGTTTGATTCATTGGCTTATTGAAATGAAATTTGACAAATATTTGATTTCTATACAATTTTGCACATTTAAAATTAAGATTACTTCCTTTACAGGTTGACAAATGAAGAAAATATTGTTGGTTTGCCACCGGGCAACCAACAAATGCAAAATAATGACGGGCAATGCCTGTCATAAAAAATGACATTTAATGACGAACCTTTAATGACGGACATTTAGTTCGCAAAAACCCTTTTAATGACGGACTTTTCATGACAGACGTCTTTTAATGACGGAGGTCTAACACGAAGCGGGAAGTGCTATACACCGGAAGACCTATTGAAACCCAAGGGTAAAGAAAAATGGAAAGTCAAGATCATTGAAGATATCAAGAAAAAGACAGAAGAGCCCATTGCAGTGAAAAACCTGGATGTTAAAAAACCAACATCTGAAGAGGACATCCAAGAATTTTTTAAGTTGGTTAAACAAAGTGATTATAAAGTGGTTGAACAGTTAGGTCGAACCCCTGCAAAGATTTTCGTATTGGCTTTCTTATTAGCTTCAGATACGCATCGTAAGACTTTGTTGGACATATTGAATCAAACTTATGTTCCGCAGGTTATTACGGTGGACAACTTGGATAACATTGTTGGAAACATAACTGCATCCAGTTCAGTAACTTTCACAGATGATGAGTTATCACCAGAAGGCACCAGACACACTAAAGTCTTGCACATTACAGTTAAGTGCAAAAATTTTGTTGTGGCAAAAGTTCTAGTTGATAATGGTTCTTCCTTGAACATAATGCCTAAATCCACGTTGGAGAAATTGCCTGTTGATATGTCTCATGTAAGACCTAGCACTATGATTGTACGAGCTTTTGATGGGGCACGTAGTGAAGTTGTTGGAGACATAGAAGTGCCCATTCAGATAGGTCCATGCACCTTCGATATAACCTTTCAGGTTATGAACATTAATTCGGCCTACAGCTTCTTGTTAGGGCGTCCCTGGATTCACTCAGCTGGAGTGGTCCCATCATCATTACACCAAAAGCTTAAATTTGTGGTCGACCGCAAACTAGTAATCATATCTAGGCAAGAGGATATCTTAGTGTCAAGACTCTCTTCAATGCTCTACATAGAAGCAACATAA

mRNA sequence

ATGGAGGAAATTTGTTATCTGTTTCAGAGTAAGTGCTCACACGATTGCATTATGATTTACTCTGTGATTGTTGTGTTTTGTTTACTTGATTTCGAATCTTTTTGCTGCAATGTGAAAGAACCTGAGCTAAGTATAATCTCTTCTGCTGGTCTATTCTACAACCATCTGCAGAAAAACAATGGTAATGTGGAGAAAACCCTTGCTACTGTAAAGACCAAGTTGGATTCTAGGTGTGTCGACGAAGTGTTGCATAAATGTTCCTTCGAACTATCGCAAATGGGTCTTAGATTTTTTATATGGGTTGGTCCACAACTTAATTATAGGCATAGTTCTTTTATGTACAGTACAACTTGTGAAATGATTGGAATTAATCGAAGCCCATGCTTGCTTTTTAATGTTATTGAAGATTATAGAAGGGAGGGTTGCCTTGTTGATATTAGGATGTTTAAGGTTATTTTAAATTTGTGTAAAGAAGCCAAGCTTGCCAAAGAGTCTTTGTCGATATTAGGGAAAGTGCCTGAATTTCATTTGCAGGCTGACACTACAATGTATAATCTGATTATAAGGTGGCTTGTGGTGAGCAAAGAATTGTCTCTTGCAAGTTTCACTGAATTTACTGAAGAATCAAAAGCTGATAAGCTGCTGGGTGGTGGAATAGGCATTAGAAGCAAAGTTGGGAGCCAAGACACTCAAATCACTACTTTGCTTCAGACGTCTTTTAATGACGGAGGTCTAACACGAAGCGGGAAGTGCTATACACCGGAAGACCTATTGAAACCCAAGGGTAAAGAAAAATGGAAAGTCAAGATCATTGAAGATATCAAGAAAAAGACAGAAGAGCCCATTGCAGTGAAAAACCTGGATGTTAAAAAACCAACATCTGAAGAGGACATCCAAGAATTTTTTAAGTTGGTTAAACAAAGTGATTATAAAGTGGTTGAACAGTTAGGTCGAACCCCTGCAAAGATTTTCGTATTGGCTTTCTTATTAGCTTCAGATACGCATCGTAAGACTTTGTTGGACATATTGAATCAAACTTATGTTCCGCAGGTTATTACGGTGGACAACTTGGATAACATTGTTGGAAACATAACTGCATCCAGTTCAGTAACTTTCACAGATGATGAGTTATCACCAGAAGGCACCAGACACACTAAAGTCTTGCACATTACAGTTAAGTGCAAAAATTTTGTTGTGGCAAAAGTTCTAGTTGATAATGGTTCTTCCTTGAACATAATGCCTAAATCCACGTTGGAGAAATTGCCTGTTGATATGTCTCATGTAAGACCTAGCACTATGATTGTACGAGCTTTTGATGGGGCACGTAGTGAAGTTGTTGGAGACATAGAAGTGCCCATTCAGATAGGTCCATGCACCTTCGATATAACCTTTCAGGTTATGAACATTAATTCGGCCTACAGCTTCTTGTTAGGGCGTCCCTGGATTCACTCAGCTGGAGTGGTCCCATCATCATTACACCAAAAGCTTAAATTTGTGGTCGACCGCAAACTAGTAATCATATCTAGGCAAGAGGATATCTTAGTGTCAAGACTCTCTTCAATGCTCTACATAGAAGCAACATAA

Coding sequence (CDS)

ATGGAGGAAATTTGTTATCTGTTTCAGAGTAAGTGCTCACACGATTGCATTATGATTTACTCTGTGATTGTTGTGTTTTGTTTACTTGATTTCGAATCTTTTTGCTGCAATGTGAAAGAACCTGAGCTAAGTATAATCTCTTCTGCTGGTCTATTCTACAACCATCTGCAGAAAAACAATGGTAATGTGGAGAAAACCCTTGCTACTGTAAAGACCAAGTTGGATTCTAGGTGTGTCGACGAAGTGTTGCATAAATGTTCCTTCGAACTATCGCAAATGGGTCTTAGATTTTTTATATGGGTTGGTCCACAACTTAATTATAGGCATAGTTCTTTTATGTACAGTACAACTTGTGAAATGATTGGAATTAATCGAAGCCCATGCTTGCTTTTTAATGTTATTGAAGATTATAGAAGGGAGGGTTGCCTTGTTGATATTAGGATGTTTAAGGTTATTTTAAATTTGTGTAAAGAAGCCAAGCTTGCCAAAGAGTCTTTGTCGATATTAGGGAAAGTGCCTGAATTTCATTTGCAGGCTGACACTACAATGTATAATCTGATTATAAGGTGGCTTGTGGTGAGCAAAGAATTGTCTCTTGCAAGTTTCACTGAATTTACTGAAGAATCAAAAGCTGATAAGCTGCTGGGTGGTGGAATAGGCATTAGAAGCAAAGTTGGGAGCCAAGACACTCAAATCACTACTTTGCTTCAGACGTCTTTTAATGACGGAGGTCTAACACGAAGCGGGAAGTGCTATACACCGGAAGACCTATTGAAACCCAAGGGTAAAGAAAAATGGAAAGTCAAGATCATTGAAGATATCAAGAAAAAGACAGAAGAGCCCATTGCAGTGAAAAACCTGGATGTTAAAAAACCAACATCTGAAGAGGACATCCAAGAATTTTTTAAGTTGGTTAAACAAAGTGATTATAAAGTGGTTGAACAGTTAGGTCGAACCCCTGCAAAGATTTTCGTATTGGCTTTCTTATTAGCTTCAGATACGCATCGTAAGACTTTGTTGGACATATTGAATCAAACTTATGTTCCGCAGGTTATTACGGTGGACAACTTGGATAACATTGTTGGAAACATAACTGCATCCAGTTCAGTAACTTTCACAGATGATGAGTTATCACCAGAAGGCACCAGACACACTAAAGTCTTGCACATTACAGTTAAGTGCAAAAATTTTGTTGTGGCAAAAGTTCTAGTTGATAATGGTTCTTCCTTGAACATAATGCCTAAATCCACGTTGGAGAAATTGCCTGTTGATATGTCTCATGTAAGACCTAGCACTATGATTGTACGAGCTTTTGATGGGGCACGTAGTGAAGTTGTTGGAGACATAGAAGTGCCCATTCAGATAGGTCCATGCACCTTCGATATAACCTTTCAGGTTATGAACATTAATTCGGCCTACAGCTTCTTGTTAGGGCGTCCCTGGATTCACTCAGCTGGAGTGGTCCCATCATCATTACACCAAAAGCTTAAATTTGTGGTCGACCGCAAACTAGTAATCATATCTAGGCAAGAGGATATCTTAGTGTCAAGACTCTCTTCAATGCTCTACATAGAAGCAACATAA

Protein sequence

MEEICYLFQSKCSHDCIMIYSVIVVFCLLDFESFCCNVKEPELSIISSAGLFYNHLQKNNGNVEKTLATVKTKLDSRCVDEVLHKCSFELSQMGLRFFIWVGPQLNYRHSSFMYSTTCEMIGINRSPCLLFNVIEDYRREGCLVDIRMFKVILNLCKEAKLAKESLSILGKVPEFHLQADTTMYNLIIRWLVVSKELSLASFTEFTEESKADKLLGGGIGIRSKVGSQDTQITTLLQTSFNDGGLTRSGKCYTPEDLLKPKGKEKWKVKIIEDIKKKTEEPIAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPAKIFVLAFLLASDTHRKTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKLPVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSMLYIEAT

Homology

[Close]

BLAST of Lag0038631 vs. NCBI nr
Match: XP_022147189.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia])

HSP 1 Score: 399.8 bits (1026), Expect = 3.6e-107
Identity = 208/304 (68.42%), Postives = 244/304 (80.26%), Query Frame = 0


Query: 243 GGLTRSGKCYTPEDLL-----------KPKGKEKWKVKIIEDIKKKTE----------EP 302
           GGLTR+G+CYTP+ LL           K K  EK K K+ ED K K +          E 
Sbjct: 659 GGLTRTGRCYTPDSLLKRVNETTSEKNKEKASEKKKEKVEEDKKGKAKLHEDARDELVEA 718

Query: 303 IAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPAKIFVLAFLLASDTHRKTLLD 362
           I VK++  K+P SEE+ QEF KLVKQS+YKV+EQLGRTPA I +L+ LL+S+ H+  LL+
Sbjct: 719 IVVKDVSPKQPMSEEETQEFLKLVKQSEYKVIEQLGRTPANISILSLLLSSEAHQNALLE 778

Query: 363 ILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAK 422
            L Q +V Q ITVDNL N+VGNITASSS++FTD+E+ PEGT HTK LHI+VKCKNF++AK
Sbjct: 779 ALKQAFVSQDITVDNLSNVVGNITASSSISFTDEEIPPEGTGHTKALHISVKCKNFLIAK 838

Query: 423 VLVDNGSSLNIMPKSTLEKLPVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFD 482
           VLVDNGSSLNIMP+STLEKLPVDMSH+RPST+IVRAFDGARS VVGDIE+PIQIGPCTFD
Sbjct: 839 VLVDNGSSLNIMPRSTLEKLPVDMSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFD 898

Query: 483 ITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSM 526
           ITFQVM+I SAYSFLLGRPWIHSAG VPS+LHQK+KF VD+KLVIIS QEDILVSR +SM
Sbjct: 899 ITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRFASM 958

[Close]

BLAST of Lag0038631 vs. NCBI nr
Match: XP_022143495.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia])

HSP 1 Score: 397.1 bits (1019), Expect = 2.3e-106
Identity = 209/305 (68.52%), Postives = 243/305 (79.67%), Query Frame = 0


Query: 243 GGLTRSGKCYTPEDLLK-------PKGKE--------------KWKVKIIEDIKKKTEEP 302
           GGLT +G+CYTP+ LLK        K KE              K K K+ ED+  +  E 
Sbjct: 561 GGLTXTGRCYTPDSLLKRVSETTSEKNKEKASEKKKEKVEEDKKGKAKLHEDVHDELVEA 620

Query: 303 IAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPAKIFVLAFLLASDTHRKTLLD 362
           I VK++  K+   EE+IQEF KLVKQS+YKV EQLGRTPAKI +L+ LL+S+ HR TLL+
Sbjct: 621 IVVKDVSPKQHVFEEEIQEFLKLVKQSEYKVTEQLGRTPAKISILSLLLSSEAHRNTLLE 680

Query: 363 ILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAK 422
            L Q +V Q ITVDNL N+VGNITASSS+TFTD+E+ PEGT HTK LHI+VKCKNF++AK
Sbjct: 681 XLKQAFVSQDITVDNLSNVVGNITASSSITFTDEEIPPEGTGHTKALHISVKCKNFLIAK 740

Query: 423 VLVDNGSSLNIMPKSTLEKLPVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFD 482
           VLVDNGSSLNIMP+STLEKLPVDMSH+RPST+IVRAFDGARS VVGDIE+PIQIGPCTFD
Sbjct: 741 VLVDNGSSLNIMPRSTLEKLPVDMSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFD 800

Query: 483 ITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSM 527
           ITFQVM+I S YSFLLGR WIHSAG VPS+LHQK+KF VD+KLVIIS QEDILVSRL+SM
Sbjct: 801 ITFQVMDITSTYSFLLGRLWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASM 860

[Close]

BLAST of Lag0038631 vs. NCBI nr
Match: XP_022155744.1 (uncharacterized protein LOC111022791 [Momordica charantia])

HSP 1 Score: 393.7 bits (1010), Expect = 2.6e-105
Identity = 206/306 (67.32%), Postives = 243/306 (79.41%), Query Frame = 0


Query: 243 GGLTRSGKCYTPEDLLK-------PKGKE--------------KWKVKIIEDIKKKTEEP 302
           GGLTR+G+CYTP+ LLK        K KE              K K K+ ED+  +  E 
Sbjct: 75  GGLTRTGRCYTPDSLLKRVNETTSEKNKEKASEKKKEKVEEDKKGKAKLHEDVHDELVEA 134

Query: 303 IAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPAKIFVLAFLLASDTHRKTLLD 362
           I VK++  K+P SEE+ QEF KLVKQS+YKV+EQLGRTPAKI +L+ LL+S+ HR  LL+
Sbjct: 135 IVVKDVSPKQPVSEEETQEFLKLVKQSEYKVIEQLGRTPAKISILSLLLSSEAHRNALLE 194

Query: 363 ILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAK 422
            L Q +V Q ITVDNL N+VGNI  SSS+TFT++E+ PEGT HTK LHI+VKCKNF++AK
Sbjct: 195 ALKQAFVSQDITVDNLSNVVGNIMTSSSITFTNEEIPPEGTGHTKALHISVKCKNFLIAK 254

Query: 423 VLVDNGSSLNIMPKSTLEKLPVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFD 482
           VLVDNGSSLNIMP+STLEKLPVDMSH+RPST+IVRAFDGARS  VGDIE+PIQIGPCTFD
Sbjct: 255 VLVDNGSSLNIMPRSTLEKLPVDMSHMRPSTVIVRAFDGARSAFVGDIEIPIQIGPCTFD 314

Query: 483 ITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSM 528
            TFQVM+I SAYSFLLGRP IHSAG VPS+LHQK+KF +D+KLVIIS QEDILVSRL+SM
Sbjct: 315 RTFQVMDITSAYSFLLGRPRIHSAGAVPSTLHQKIKFAIDQKLVIISGQEDILVSRLASM 374

[Close]

BLAST of Lag0038631 vs. NCBI nr
Match: XP_022150030.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111018303 [Momordica charantia])

HSP 1 Score: 384.8 bits (987), Expect = 1.2e-102
Identity = 203/290 (70.00%), Postives = 237/290 (81.72%), Query Frame = 0


Query: 243 GGLTRSGKCYTPEDLLKPKGK---EKWKVKIIEDIKKKTEEPIAVK---NLDVKKPTSEE 302
           GGLTR+G+CYTP+ LLK   +   EK K K  E  K+K EE    K   + DV     EE
Sbjct: 106 GGLTRTGRCYTPDSLLKRVNETTSEKNKEKASEKKKEKVEEDKKGKAKLHEDVHDELVEE 165

Query: 303 DIQEFFKLVKQSDYKVVEQLGRTPAKIFVLAFLLASDTHRKTLLDILNQTYVPQVITVDN 362
           + QEF KLVKQ++YKV+EQLGRTPAKI +L+ LL+S+ HR  LL+ L Q +V Q ITVDN
Sbjct: 166 ETQEFLKLVKQNEYKVIEQLGRTPAKISILSLLLSSEAHRNALLEALKQAFVSQDITVDN 225

Query: 363 LDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKS 422
           L N+VGNI ASS +TFTD+E+ PEGT HTK LHI+VKCKNF++AKVLV NGSSLNIMP+S
Sbjct: 226 LSNVVGNIMASSCITFTDEEIPPEGTGHTKALHISVKCKNFLIAKVLVGNGSSLNIMPRS 285

Query: 423 TLEKLPVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFL 482
           TLEKLPVDMSH+RPST+IVRAFDGAR+ VVGDIE+PIQIG CTFDITFQVM+I SAYSFL
Sbjct: 286 TLEKLPVDMSHMRPSTVIVRAFDGARNAVVGDIEIPIQIGLCTFDITFQVMDITSAYSFL 345

Query: 483 LGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSMLYIEA 527
           LGRPWIHSAG VPS+LHQK+KF VD+KLVIIS QEDILVSRL+SM Y+EA
Sbjct: 346 LGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYVEA 395

[Close]

BLAST of Lag0038631 vs. NCBI nr
Match: XP_022158986.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia])

HSP 1 Score: 367.9 bits (943), Expect = 1.5e-97
Identity = 187/283 (66.08%), Postives = 224/283 (79.15%), Query Frame = 0


Query: 243 GGLTRSGKCYTPEDLLK-------PKGKE--------------KWKVKIIEDIKKKTEEP 302
           GGLTR+G+CYTP+ LLK        K KE              K K K+ ED+  +  E 
Sbjct: 621 GGLTRTGRCYTPDSLLKCVNETTSEKNKEKASEKKKEKVEEDKKGKAKLHEDVHDELVEA 680

Query: 303 IAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPAKIFVLAFLLASDTHRKTLLD 362
           I VK++  K+P SEE+ QE  KLVKQS+YKV+EQLGRTPAKI +L+ LL+S+ HR  LL+
Sbjct: 681 IVVKDVSPKQPMSEEETQEILKLVKQSEYKVIEQLGRTPAKISILSLLLSSEAHRNALLE 740

Query: 363 ILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAK 422
            L Q +V Q ITVDNL N+VGNI+ +SS+TFTD+E+ PEGT HTK LHI++KCKNF++AK
Sbjct: 741 ALKQAFVSQDITVDNLSNVVGNISXASSITFTDEEIPPEGTGHTKALHISIKCKNFLIAK 800

Query: 423 VLVDNGSSLNIMPKSTLEKLPVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFD 482
           VLVDNGSSLNIMP+STLEKLPVDMSH+RPST+IVRAFDGARS VVGDIE+PIQIGPCTFD
Sbjct: 801 VLVDNGSSLNIMPRSTLEKLPVDMSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFD 860

Query: 483 ITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKL 505
           ITFQVM+I SAYSFLLGRPWIHSAG VPS+LHQK+KF VD+ +
Sbjct: 861 ITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQNV 903

[Close]

BLAST of Lag0038631 vs. ExPASy Swiss-Prot
Match: Q9LVS3 (Pentatricopeptide repeat-containing protein At5g47360 OS=Arabidopsis thaliana OX=3702 GN=At5g47360 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.6e-33
Identity = 68/158 (43.04%), Postives = 102/158 (64.56%), Query Frame = 0


Query: 43  LSIISSAGLFYNHLQKNNGNVEKTLATVKTKLDSRCVDEVLHKCSFELSQMGLRFFIWVG 102
           L+ +S+A   Y  LQ    N+EK LA+   +LDS C++EVL +C     Q GLRFFIW G
Sbjct: 27  LTTVSAAERLYGQLQGCTSNLEKELASANVQLDSSCINEVLRRCDPNQFQSGLRFFIWAG 86

Query: 103 PQLNYRHSSFMYSTTCEMIGINRSPCLLFNVIEDYRREGCLVDIRMFKVILNLCKEAKLA 162
              ++RHS++MY+  C+++ I   P L+  VIE YR+E C V+++  +++L LC +A LA
Sbjct: 87  TLSSHRHSAYMYTKACDILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLA 146

Query: 163 KESLSILGKVPEFHLQADTTMYNLIIRWLVVSKELSLA 201
            E+L +L K PEF++ ADT  YNL+IR      +L++A
Sbjct: 147 DEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIA 184

[Close]

BLAST of Lag0038631 vs. ExPASy TrEMBL
Match: A0A6J1D099 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 1.7e-107
Identity = 208/304 (68.42%), Postives = 244/304 (80.26%), Query Frame = 0


Query: 243 GGLTRSGKCYTPEDLL-----------KPKGKEKWKVKIIEDIKKKTE----------EP 302
           GGLTR+G+CYTP+ LL           K K  EK K K+ ED K K +          E 
Sbjct: 659 GGLTRTGRCYTPDSLLKRVNETTSEKNKEKASEKKKEKVEEDKKGKAKLHEDARDELVEA 718

Query: 303 IAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPAKIFVLAFLLASDTHRKTLLD 362
           I VK++  K+P SEE+ QEF KLVKQS+YKV+EQLGRTPA I +L+ LL+S+ H+  LL+
Sbjct: 719 IVVKDVSPKQPMSEEETQEFLKLVKQSEYKVIEQLGRTPANISILSLLLSSEAHQNALLE 778

Query: 363 ILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAK 422
            L Q +V Q ITVDNL N+VGNITASSS++FTD+E+ PEGT HTK LHI+VKCKNF++AK
Sbjct: 779 ALKQAFVSQDITVDNLSNVVGNITASSSISFTDEEIPPEGTGHTKALHISVKCKNFLIAK 838

Query: 423 VLVDNGSSLNIMPKSTLEKLPVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFD 482
           VLVDNGSSLNIMP+STLEKLPVDMSH+RPST+IVRAFDGARS VVGDIE+PIQIGPCTFD
Sbjct: 839 VLVDNGSSLNIMPRSTLEKLPVDMSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFD 898

Query: 483 ITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSM 526
           ITFQVM+I SAYSFLLGRPWIHSAG VPS+LHQK+KF VD+KLVIIS QEDILVSR +SM
Sbjct: 899 ITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRFASM 958

[Close]

BLAST of Lag0038631 vs. ExPASy TrEMBL
Match: A0A6J1CNY7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 1.1e-106
Identity = 209/305 (68.52%), Postives = 243/305 (79.67%), Query Frame = 0


Query: 243 GGLTRSGKCYTPEDLLK-------PKGKE--------------KWKVKIIEDIKKKTEEP 302
           GGLT +G+CYTP+ LLK        K KE              K K K+ ED+  +  E 
Sbjct: 561 GGLTXTGRCYTPDSLLKRVSETTSEKNKEKASEKKKEKVEEDKKGKAKLHEDVHDELVEA 620

Query: 303 IAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPAKIFVLAFLLASDTHRKTLLD 362
           I VK++  K+   EE+IQEF KLVKQS+YKV EQLGRTPAKI +L+ LL+S+ HR TLL+
Sbjct: 621 IVVKDVSPKQHVFEEEIQEFLKLVKQSEYKVTEQLGRTPAKISILSLLLSSEAHRNTLLE 680

Query: 363 ILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAK 422
            L Q +V Q ITVDNL N+VGNITASSS+TFTD+E+ PEGT HTK LHI+VKCKNF++AK
Sbjct: 681 XLKQAFVSQDITVDNLSNVVGNITASSSITFTDEEIPPEGTGHTKALHISVKCKNFLIAK 740

Query: 423 VLVDNGSSLNIMPKSTLEKLPVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFD 482
           VLVDNGSSLNIMP+STLEKLPVDMSH+RPST+IVRAFDGARS VVGDIE+PIQIGPCTFD
Sbjct: 741 VLVDNGSSLNIMPRSTLEKLPVDMSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFD 800

Query: 483 ITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSM 527
           ITFQVM+I S YSFLLGR WIHSAG VPS+LHQK+KF VD+KLVIIS QEDILVSRL+SM
Sbjct: 801 ITFQVMDITSTYSFLLGRLWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASM 860

[Close]

BLAST of Lag0038631 vs. ExPASy TrEMBL
Match: A0A6J1DR66 (uncharacterized protein LOC111022791 OS=Momordica charantia OX=3673 GN=LOC111022791 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.2e-105
Identity = 206/306 (67.32%), Postives = 243/306 (79.41%), Query Frame = 0


Query: 243 GGLTRSGKCYTPEDLLK-------PKGKE--------------KWKVKIIEDIKKKTEEP 302
           GGLTR+G+CYTP+ LLK        K KE              K K K+ ED+  +  E 
Sbjct: 75  GGLTRTGRCYTPDSLLKRVNETTSEKNKEKASEKKKEKVEEDKKGKAKLHEDVHDELVEA 134

Query: 303 IAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPAKIFVLAFLLASDTHRKTLLD 362
           I VK++  K+P SEE+ QEF KLVKQS+YKV+EQLGRTPAKI +L+ LL+S+ HR  LL+
Sbjct: 135 IVVKDVSPKQPVSEEETQEFLKLVKQSEYKVIEQLGRTPAKISILSLLLSSEAHRNALLE 194

Query: 363 ILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAK 422
            L Q +V Q ITVDNL N+VGNI  SSS+TFT++E+ PEGT HTK LHI+VKCKNF++AK
Sbjct: 195 ALKQAFVSQDITVDNLSNVVGNIMTSSSITFTNEEIPPEGTGHTKALHISVKCKNFLIAK 254

Query: 423 VLVDNGSSLNIMPKSTLEKLPVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFD 482
           VLVDNGSSLNIMP+STLEKLPVDMSH+RPST+IVRAFDGARS  VGDIE+PIQIGPCTFD
Sbjct: 255 VLVDNGSSLNIMPRSTLEKLPVDMSHMRPSTVIVRAFDGARSAFVGDIEIPIQIGPCTFD 314

Query: 483 ITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSM 528
            TFQVM+I SAYSFLLGRP IHSAG VPS+LHQK+KF +D+KLVIIS QEDILVSRL+SM
Sbjct: 315 RTFQVMDITSAYSFLLGRPRIHSAGAVPSTLHQKIKFAIDQKLVIISGQEDILVSRLASM 374

[Close]

BLAST of Lag0038631 vs. ExPASy TrEMBL
Match: A0A6J1D7C7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111018303 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 5.8e-103
Identity = 203/290 (70.00%), Postives = 237/290 (81.72%), Query Frame = 0


Query: 243 GGLTRSGKCYTPEDLLKPKGK---EKWKVKIIEDIKKKTEEPIAVK---NLDVKKPTSEE 302
           GGLTR+G+CYTP+ LLK   +   EK K K  E  K+K EE    K   + DV     EE
Sbjct: 106 GGLTRTGRCYTPDSLLKRVNETTSEKNKEKASEKKKEKVEEDKKGKAKLHEDVHDELVEE 165

Query: 303 DIQEFFKLVKQSDYKVVEQLGRTPAKIFVLAFLLASDTHRKTLLDILNQTYVPQVITVDN 362
           + QEF KLVKQ++YKV+EQLGRTPAKI +L+ LL+S+ HR  LL+ L Q +V Q ITVDN
Sbjct: 166 ETQEFLKLVKQNEYKVIEQLGRTPAKISILSLLLSSEAHRNALLEALKQAFVSQDITVDN 225

Query: 363 LDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKS 422
           L N+VGNI ASS +TFTD+E+ PEGT HTK LHI+VKCKNF++AKVLV NGSSLNIMP+S
Sbjct: 226 LSNVVGNIMASSCITFTDEEIPPEGTGHTKALHISVKCKNFLIAKVLVGNGSSLNIMPRS 285

Query: 423 TLEKLPVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFL 482
           TLEKLPVDMSH+RPST+IVRAFDGAR+ VVGDIE+PIQIG CTFDITFQVM+I SAYSFL
Sbjct: 286 TLEKLPVDMSHMRPSTVIVRAFDGARNAVVGDIEIPIQIGLCTFDITFQVMDITSAYSFL 345

Query: 483 LGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSMLYIEA 527
           LGRPWIHSAG VPS+LHQK+KF VD+KLVIIS QEDILVSRL+SM Y+EA
Sbjct: 346 LGRPWIHSAGAVPSTLHQKIKFAVDQKLVIISGQEDILVSRLASMPYVEA 395

[Close]

BLAST of Lag0038631 vs. ExPASy TrEMBL
Match: A0A6J1E2J7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 7.3e-98
Identity = 187/283 (66.08%), Postives = 224/283 (79.15%), Query Frame = 0


Query: 243 GGLTRSGKCYTPEDLLK-------PKGKE--------------KWKVKIIEDIKKKTEEP 302
           GGLTR+G+CYTP+ LLK        K KE              K K K+ ED+  +  E 
Sbjct: 621 GGLTRTGRCYTPDSLLKCVNETTSEKNKEKASEKKKEKVEEDKKGKAKLHEDVHDELVEA 680

Query: 303 IAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPAKIFVLAFLLASDTHRKTLLD 362
           I VK++  K+P SEE+ QE  KLVKQS+YKV+EQLGRTPAKI +L+ LL+S+ HR  LL+
Sbjct: 681 IVVKDVSPKQPMSEEETQEILKLVKQSEYKVIEQLGRTPAKISILSLLLSSEAHRNALLE 740

Query: 363 ILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAK 422
            L Q +V Q ITVDNL N+VGNI+ +SS+TFTD+E+ PEGT HTK LHI++KCKNF++AK
Sbjct: 741 ALKQAFVSQDITVDNLSNVVGNISXASSITFTDEEIPPEGTGHTKALHISIKCKNFLIAK 800

Query: 423 VLVDNGSSLNIMPKSTLEKLPVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFD 482
           VLVDNGSSLNIMP+STLEKLPVDMSH+RPST+IVRAFDGARS VVGDIE+PIQIGPCTFD
Sbjct: 801 VLVDNGSSLNIMPRSTLEKLPVDMSHMRPSTVIVRAFDGARSAVVGDIEIPIQIGPCTFD 860

Query: 483 ITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKL 505
           ITFQVM+I SAYSFLLGRPWIHSAG VPS+LHQK+KF VD+ +
Sbjct: 861 ITFQVMDITSAYSFLLGRPWIHSAGAVPSTLHQKIKFAVDQNV 903

[Close]

BLAST of Lag0038631 vs. TAIR 10
Match: AT5G47360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 145.6 bits (366), Expect = 1.1e-34
Identity = 68/158 (43.04%), Postives = 102/158 (64.56%), Query Frame = 0


Query: 43  LSIISSAGLFYNHLQKNNGNVEKTLATVKTKLDSRCVDEVLHKCSFELSQMGLRFFIWVG 102
           L+ +S+A   Y  LQ    N+EK LA+   +LDS C++EVL +C     Q GLRFFIW G
Sbjct: 27  LTTVSAAERLYGQLQGCTSNLEKELASANVQLDSSCINEVLRRCDPNQFQSGLRFFIWAG 86

Query: 103 PQLNYRHSSFMYSTTCEMIGINRSPCLLFNVIEDYRREGCLVDIRMFKVILNLCKEAKLA 162
              ++RHS++MY+  C+++ I   P L+  VIE YR+E C V+++  +++L LC +A LA
Sbjct: 87  TLSSHRHSAYMYTKACDILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLA 146

Query: 163 KESLSILGKVPEFHLQADTTMYNLIIRWLVVSKELSLA 201
            E+L +L K PEF++ ADT  YNL+IR      +L++A
Sbjct: 147 DEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIA 184

The following BLAST results are available for this feature:

BLAST of Lag0038631 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147189.1	3.6e-107	68.42	LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]	[more]
XP_022143495.1	2.3e-106	68.52	LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]	[more]
XP_022155744.1	2.6e-105	67.32	uncharacterized protein LOC111022791 [Momordica charantia]	[more]
XP_022150030.1	1.2e-102	70.00	LOW QUALITY PROTEIN: uncharacterized protein LOC111018303 [Momordica charantia]	[more]
XP_022158986.1	1.5e-97	66.08	LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]	[more]

BLAST of Lag0038631 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVS3	1.6e-33	43.04	Pentatricopeptide repeat-containing protein At5g47360 OS=Arabidopsis thaliana OX...	[more]

BLAST of Lag0038631 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D099	1.7e-107	68.42	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1	[more]
A0A6J1CNY7	1.1e-106	68.52	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1	[more]
A0A6J1DR66	1.2e-105	67.32	uncharacterized protein LOC111022791 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1D7C7	5.8e-103	70.00	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111018303 PE=4 SV=1	[more]
A0A6J1E2J7	7.3e-98	66.08	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1	[more]

BLAST of Lag0038631 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47360.1	1.1e-34	43.04	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 526..527
None	No IPR available	PANTHER	PTHR33240	OS08G0508500 PROTEIN	coord: 273..525
None	No IPR available	PANTHER	PTHR33240:SF7	GAG-PRO-LIKE PROTEIN	coord: 273..525
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 390..483 e-value: 3.68374E-16 score: 71.984
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 373..511 e-value: 3.0E-15 score: 58.1
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 386..487
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 53..208 e-value: 8.7E-8 score: 33.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0038631.1	Lag0038631.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0030430	host cell cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity