Lag0038569 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0038569
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Ulp1-like peptidase
Location	chr2: 20627221 .. 20629092 (+)
RNA-Seq Expression	Lag0038569
Synteny	Lag0038569

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATACAACCCCCTAGTTGAGATTCCTGAGAAGCTTGATAGACGTTTCCAAAACTGGTTGGACGACACAGAGGTGGACAATGCTCCAAGGAAGACGACATATGCTTTTAGGAACAAAGTGTGGTTTCAAAACCTTTTGAAACCCTGCTATTGGATGAGCGATGAGGTAAAGTCTGAAGTTCTTAATTTAGTTTATTTATTGTAATGTCATCGACTGATGCAGGTCATTGACTCACTTTTTATGTTTGTCCGGAAGAAACTGCAACAACGAGTAGACTTATGTTGTTGGAAGTTTGTCACTGCAGATATTGTTGTTACCGTAAGTGTCTCTTCACTAGCACATTAACTCAATTTTTAGTTACAAATACTTTATGATTTTCTTAAACAGGATTTTCTGAGGCGTAGCGACGACATAGTTGAAGAGTTGAAGAAAGTGCAAGATCCTAAGTTGATTACGTACGACTGGAGTACGACCAATACTGTGATAGACTATTTAGGTATTAGATATTCTCGTATTTGTATTAGATATCCTTCGTTGATCACGTTCCTTCGTTGATTTTTCAACTATTTAGGTATTAGATATTCTTGTATTGTGATGTAAAGTTTGTAAACTTTTTGAACGACAAGGCAATACATCAATTTTTTTGGAGTTGTTGTTTCTGATGTGTTGTGGAGCTTGTGGTGATAAATTTGGGAGTGTATTTTTCGTTTTTCAGGTAAAGAAAAATTTTTGGGTTATTATACCTACGCCATTATGCTGTAGAATTTTTTGTGACCAAAATTTCATATCGATCAAATGGGACATATTTAAATTAAAGCTAATGAGAAGTGGCCAGATGAATTTCTTGATAAGTAAAGAAATAAAGAAGTAAAGGGATACTATACCTACACTTTGAGAAGTATTGTAGTCATTTCTTTATAATAAGTAAAAAAAGTAAAGGGATAGAGGAAGAAGGGAAGAAAAGGAAAAAGAAAGATAGAGAAGAGAGAGAGAGAGATTTAAACAAAAAAAAACATACTGTTTTTTTTCTTGGTCAATTTCCTGACCGGGAAATTGACCAAGAAAAAAAAACAGCAAGCGTTATTGCTTGCTAGTGCTTGCTGTTTTTTTCCTGGTCGGTTTCCCGGGAAACCGACCAGGAAAAAAAACAGCGACTGTTTTAAGCTTGTTCTTTCAAATTTTTTTGTTTGTCCTATACAAATGTGGTCAACACCTAATAACCAATTTCATCCATACATCTTTTTATAATAATAAGTACAAAATCAAGCGGTTCTTAATACTCAATTTCATCCATCCATACACAAGATGCTTATATTTACATATTAAATACAACATACAAAATATCGCATAAAGTAAGAGATCTCATGTCGTTGAGAGCGGTTCACGACAAGTTTGTAAATTCGTCTTACATCCTCGAATTTCGATTTAATCAAATGACCTACCACCCGACTCTTCGCTTGTCTATGGTGGTGATTTAGTAATTCATGGGAGCATGTATGAACATTATAATATTTCGAAATCTTGAATACGTCATAACCCTTCGGTTTTATAGCTCTAACTTTCCATTTGCAAGATTCGATTATACATTTCACCACGAACAAAGACTTCGTGGATTTCTTAACCCTAAACTCGAAATTTTTCTTCATGGCCATTACAGACAACCTCGTTTTCAATTCTTCCTTACAATCATATAGTTGTCCAAGTTCAACATCACCAGTAGAATACGAACACTGACCTGATGTGATCAATTCCTGGCTAGAAGCACCTTCCATTCTAGAAGCAAGAGGAGCAACATCTTCCTCAACTTCGTTGCCTCCATCTGTCCCACCATCTGCCTCAACTTCATCGCCAGCAACGTCATCATCATAA

mRNA sequence

ATGCCATACAACCCCCTAGTTGAGATTCCTGAGAAGCTTGATAGACGTTTCCAAAACTGGTTGGACGACACAGAGGTGGACAATGCTCCAAGGAAGACGACATATGCTTTTAGGAACAAAGTGTGGTTTCAAAACCTTTTGAAACCCTGCTATTGGATGAGCGATGAGGTCATTGACTCACTTTTTATGTTTGTCCGGAAGAAACTGCAACAACGAGTAGACTTATGTTGTTGGAAGTTTGTCACTGCAGATATTGTTGTTACCGATTTTCTGAGGCGTAGCGACGACATAGTTGAAGAGTTGAAGAAAGTGCAAGATCCTAAGTTGATTACGTACGACTGGAGTACGACCAATACTGTGATAGACTATTTAGAAGCACCTTCCATTCTAGAAGCAAGAGGAGCAACATCTTCCTCAACTTCGTTGCCTCCATCTGTCCCACCATCTGCCTCAACTTCATCGCCAGCAACGTCATCATCATAA

Coding sequence (CDS)

ATGCCATACAACCCCCTAGTTGAGATTCCTGAGAAGCTTGATAGACGTTTCCAAAACTGGTTGGACGACACAGAGGTGGACAATGCTCCAAGGAAGACGACATATGCTTTTAGGAACAAAGTGTGGTTTCAAAACCTTTTGAAACCCTGCTATTGGATGAGCGATGAGGTCATTGACTCACTTTTTATGTTTGTCCGGAAGAAACTGCAACAACGAGTAGACTTATGTTGTTGGAAGTTTGTCACTGCAGATATTGTTGTTACCGATTTTCTGAGGCGTAGCGACGACATAGTTGAAGAGTTGAAGAAAGTGCAAGATCCTAAGTTGATTACGTACGACTGGAGTACGACCAATACTGTGATAGACTATTTAGAAGCACCTTCCATTCTAGAAGCAAGAGGAGCAACATCTTCCTCAACTTCGTTGCCTCCATCTGTCCCACCATCTGCCTCAACTTCATCGCCAGCAACGTCATCATCATAA

Protein sequence

MPYNPLVEIPEKLDRRFQNWLDDTEVDNAPRKTTYAFRNKVWFQNLLKPCYWMSDEVIDSLFMFVRKKLQQRVDLCCWKFVTADIVVTDFLRRSDDIVEELKKVQDPKLITYDWSTTNTVIDYLEAPSILEARGATSSSTSLPPSVPPSASTSSPATSSS

Homology

[Close]

BLAST of Lag0038569 vs. NCBI nr
Match: XP_022148308.1 (uncharacterized protein LOC111016993 [Momordica charantia])

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-15
Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 0


Query: 25  EVDNAPRKTTYAFRNKVWFQNLLKPCYWMSDEVIDSLFMFVRKKLQQRVDLCCWKFVTAD 84
           +V  A RKT Y+ +NK WF+NLL+P  W + EV+D LFM +RKKL+QR DLC  KF T D
Sbjct: 105 QVTGATRKTVYSIKNKAWFRNLLRPGNWCTAEVVDELFMLLRKKLEQRPDLCSRKFTTGD 164

Query: 85  IVVTDFLRRSDDI---VEELKKVQDPKLITYDW 115
           +V+ ++ RR DD+   ++    +       YDW
Sbjct: 165 LVLANYFRRKDDJYACMQSDSSLPSKVAAEYDW 197

[Close]

BLAST of Lag0038569 vs. NCBI nr
Match: XP_022155476.1 (uncharacterized protein LOC111022607 [Momordica charantia])

HSP 1 Score: 92.4 bits (228), Expect = 3.7e-15
Identity = 43/122 (35.25%), Postives = 68/122 (55.74%), Query Frame = 0


Query: 3   YNPLVEIPEKLDRRFQNWLDDTEVDNAPRKTTYAFRNKVWFQNLLKPCYWMSDEVIDSLF 62
           Y+P   IP +LD +FQ W+DD ++D   R T    + K W+++LL P   + DEV+D+L 
Sbjct: 149 YDPACPIPPQLDGQFQTWMDDLDIDGRTRSTAAGLQGKEWYRDLLDPTVQLKDEVVDALV 208

Query: 63  MFVRKKLQQRVDLCCWKFVTADIVVTDFLRRSDDIVEELKKVQDPKLITYDWSTTNTVID 122
           +F  KKL++ + LC  KF   D++++  L R+D     +K       I Y  S  NT+  
Sbjct: 209 LFTAKKLEKCIYLCRKKFAIGDVLLSTLLNRTDGPYAAMKPGVLSTRIEYPCSQENTIFR 268

Query: 123 YL 125
           Y+
Sbjct: 269 YV 270

[Close]

BLAST of Lag0038569 vs. NCBI nr
Match: XP_022158807.1 (uncharacterized protein LOC111025273 [Momordica charantia])

HSP 1 Score: 68.9 bits (167), Expect = 4.4e-08
Identity = 34/104 (32.69%), Postives = 54/104 (51.92%), Query Frame = 0


Query: 21  LDDTEVDNAPRKTTYAFRNKVWFQNLLKPCYWMSDEVIDSLFMFVRKKLQQRVDLCCWKF 80
           +DD   D+  R T+   + K WF  LL P + + DE IDSL M   +K+++   L   +F
Sbjct: 1   MDDPSTDDNSRSTSVGIKYKSWFGLLLDPQFQLDDEYIDSLMMLTARKVEKCKHLLRVQF 60

Query: 81  VTADIVVTDFLRRSDDIVEELKKVQDPKLITYDWSTTNTVIDYL 125
              D+++++ LRR+D     +K    P   TYDW    T+  Y+
Sbjct: 61  AIGDVLLSNLLRRTDGPYAAMKPGVLPSKCTYDWRQERTIFRYV 104

[Close]

BLAST of Lag0038569 vs. NCBI nr
Match: KAA0040918.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 6.4e-07
Identity = 35/122 (28.69%), Postives = 64/122 (52.46%), Query Frame = 0


Query: 3   YNPLVEIPEKLDRRFQNWLDDTEVDNAPRKTTYAFRNKVWFQNLLKPCYWMSDEVIDSLF 62
           Y+P+ +I +    R + W+ D   D+  R+T +  ++KV+F++L     W++DE +D+LF
Sbjct: 288 YDPMHKILDVHLDRLRAWITDKRTDDEVRETFHGKKSKVFFRDLFMCRQWLADEHLDALF 347

Query: 63  MFVRKKLQQRVDLCCWKFVTADIVVTDFLRRSDDIVEELKKVQDPKLITYDWSTTNTVID 122
           +F+R K++         F TAD + T  L     + +E  K   P    +DW     ++D
Sbjct: 348 LFIRLKIKAVGIPSSQNFTTADTIFTGILVAKWPLYKECIKENRP----FDWEEEYMLVD 405

Query: 123 YL 125
           Y+
Sbjct: 408 YV 405

[Close]

BLAST of Lag0038569 vs. NCBI nr
Match: KAA0040437.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-06
Identity = 36/122 (29.51%), Postives = 65/122 (53.28%), Query Frame = 0


Query: 3   YNPLVEIPEKLDRRFQNWLDDTEVDNAPRKTTYAFRNKVWFQNLLKPCYWMSDEVIDSLF 62
           Y+P+ +I +    R + W+ D   D+  R+T +  ++K +F++L     W++DE +D+LF
Sbjct: 247 YDPMHKILDVHLDRLRAWITDKRTDDELRETFHGKKSKAFFRDLFMCRRWLADEHLDALF 306

Query: 63  MFVRKKLQQRVDLCCWKFVTADIVVTDFLRRSDDIVEELKKVQDPKLITYDWSTTNTVID 122
           +F+R K++         F TAD V   F+ RS  + +E  K   P    +DW     ++D
Sbjct: 307 LFIRLKIKAAEIPSSQNFTTADTV---FMFRSGPLYKECIKENRP----FDWDEEYRLVD 361

Query: 123 YL 125
           Y+
Sbjct: 367 YV 361

The following BLAST results are available for this feature:

BLAST of Lag0038569 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148308.1	1.7e-15	45.16	uncharacterized protein LOC111016993 [Momordica charantia]	[more]
XP_022155476.1	3.7e-15	35.25	uncharacterized protein LOC111022607 [Momordica charantia]	[more]
XP_022158807.1	4.4e-08	32.69	uncharacterized protein LOC111025273 [Momordica charantia]	[more]
KAA0040918.1	6.4e-07	28.69	Ulp1-like peptidase [Cucumis melo var. makuwa]	[more]
KAA0040437.1	1.1e-06	29.51	Ulp1-like peptidase [Cucumis melo var. makuwa]	[more]

BLAST of Lag0038569 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0038569.1	Lag0038569.1	mRNA