Lag0038519 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0038519
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	CCHC-type domain-containing protein
Location	chr2: 19324264 .. 19325442 (+)
RNA-Seq Expression	Lag0038519
Synteny	Lag0038519

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTCCGATTCGTGACTTTTTGGGTTCATTTTTGCGAGCTTCCGATGGATCTCTATAATTTGTCTATGGCTGAGCGCCTGGGAAATGCGATTGGGAGCTTTGAAGAGTATGATAAAGGTAACAGAGGATATGGATGGCGGGAGAGCCTTCGTGTTCGGGTACGACTTGACATAACGAAGCTGTTCCAACATGGAATCAAGGTAATTCTGGGTGGGGGATTGGGGAGTTGTTGGACTCCAATTAGGTATGAGAAACTTCCTGAGATATGTTCTTTCTGTGGTGTTATTGGCCACAACTTCAAAAGCTGCAGTCAGTATCTCAATGAAGTGTTCTCAGTGTCTCCAAAGCATGAATATGGGCCCTGGATGCAATATTCAGGCAGAACCACGATGATGTACCGATCAGCGAGCAACAGTCCATTATCTAAGCACAAAAATATGAGTACGAATTTAGGGGGCGCGGGCATGTCTGTGCAGAATATGATTGTTGACGACATCGAAACTACTTCCCTGACAGCGGTTTCTGAGGCCAAATTGATGGATATCTTGCCAGCGGCAATGATCGAACCTCAGATGCCACCATTAATGGAGAATAATATCGCAATTAATGATGGCCAAATTAGCGCAACGATGGAGGCTGCAACTAAGGTAAAAAAACACTTGGAATATGATTTTGTCATTAATGAATCTTCGGATATGCAGGCGATTACGAAAATATTGGAATTTAAATCCCCAAAAAATCAGGGGCCAAAATTTAGTTTCTCAGCTATTCCTGTAACCGACTGAAAGACCCACGTGGCTATGGAGGTGAAAGACGATAAAGGCACGCAAAATGTTGACCATTTCCAATTGGGCTCACAACTTAAAAGTACATCAAAGGCCCAGACTTTTTCCCACTTCCATCAAGTTGGGCCAGACCTGAATCAAGTTATCAACACACATGAATCCAATGGGCAGCAAGTGGGGCCGGAACCAGTGGTATTGCAGAATCCGAATGTCAAAGTCTGAAAGCGTAGAGCACGTTCTTCAGCTACTGGACCATCTGGTAATGCTGACATGGATCTTTCAAAGAAAAGAGCTGGAGTGGGCCTCACTGGAGGTTCAAAGAAAAGAGCTATAAATGAAGATGACTGTTTGAATTATTCAAATGACAAATCGGTGGAGGCTGAATCTTAG

mRNA sequence

ATGGAGTTCCGATTCGTGACTTTTTGGGTTCATTTTTGCGAGCTTCCGATGGATCTCTATAATTTGTCTATGGCTGAGCGCCTGGGAAATGCGATTGGGAGCTTTGAAGAGTATGATAAAGGTAACAGAGGATATGGATGGCGGGAGAGCCTTCGTGTTCGGGTACGACTTGACATAACGAAGCTGTTCCAACATGGAATCAAGGTAATTCTGGGTGGGGGATTGGGGAGTTGTTGGACTCCAATTAGGTATGAGAAACTTCCTGAGATATGTTCTTTCTGTGGTGTTATTGGCCACAACTTCAAAAGCTGCAGTCAGTATCTCAATGAAGTGTTCTCAGTGTCTCCAAAGCATGAATATGGGCCCTGGATGCAATATTCAGGCAGAACCACGATGATGTACCGATCAGCGAGCAACAGTCCATTATCTAAGCACAAAAATATGAGTACGAATTTAGGGGGCGCGGGCATGTCTGTGCAGAATATGATTGTTGACGACATCGAAACTACTTCCCTGACAGCGGTTTCTGAGGCCAAATTGATGGATATCTTGCCAGCGGCAATGATCGAACCTCAGATGCCACCATTAATGGAGAATAATATCGCAATTAATGATGGCCAAATTAGCGCAACGATGGAGGCTGCAACTAAGACCCACGTGGCTATGGAGGTGAAAGACGATAAAGGCACGCAAAATGTTGACCATTTCCAATTGGGCTCACAACTTAAAACTACTGGACCATCTGGTAATGCTGACATGGATCTTTCAAAGAAAAGAGCTGGAGTGGGCCTCACTGGAGGTTCAAAGAAAAGAGCTATAAATGAAGATGACTGTTTGAATTATTCAAATGACAAATCGGTGGAGGCTGAATCTTAG

Coding sequence (CDS)

ATGGAGTTCCGATTCGTGACTTTTTGGGTTCATTTTTGCGAGCTTCCGATGGATCTCTATAATTTGTCTATGGCTGAGCGCCTGGGAAATGCGATTGGGAGCTTTGAAGAGTATGATAAAGGTAACAGAGGATATGGATGGCGGGAGAGCCTTCGTGTTCGGGTACGACTTGACATAACGAAGCTGTTCCAACATGGAATCAAGGTAATTCTGGGTGGGGGATTGGGGAGTTGTTGGACTCCAATTAGGTATGAGAAACTTCCTGAGATATGTTCTTTCTGTGGTGTTATTGGCCACAACTTCAAAAGCTGCAGTCAGTATCTCAATGAAGTGTTCTCAGTGTCTCCAAAGCATGAATATGGGCCCTGGATGCAATATTCAGGCAGAACCACGATGATGTACCGATCAGCGAGCAACAGTCCATTATCTAAGCACAAAAATATGAGTACGAATTTAGGGGGCGCGGGCATGTCTGTGCAGAATATGATTGTTGACGACATCGAAACTACTTCCCTGACAGCGGTTTCTGAGGCCAAATTGATGGATATCTTGCCAGCGGCAATGATCGAACCTCAGATGCCACCATTAATGGAGAATAATATCGCAATTAATGATGGCCAAATTAGCGCAACGATGGAGGCTGCAACTAAGACCCACGTGGCTATGGAGGTGAAAGACGATAAAGGCACGCAAAATGTTGACCATTTCCAATTGGGCTCACAACTTAAAACTACTGGACCATCTGGTAATGCTGACATGGATCTTTCAAAGAAAAGAGCTGGAGTGGGCCTCACTGGAGGTTCAAAGAAAAGAGCTATAAATGAAGATGACTGTTTGAATTATTCAAATGACAAATCGGTGGAGGCTGAATCTTAG

Protein sequence

MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHNFKSCSQYLNEVFSVSPKHEYGPWMQYSGRTTMMYRSASNSPLSKHKNMSTNLGGAGMSVQNMIVDDIETTSLTAVSEAKLMDILPAAMIEPQMPPLMENNIAINDGQISATMEAATKTHVAMEVKDDKGTQNVDHFQLGSQLKTTGPSGNADMDLSKKRAGVGLTGGSKKRAINEDDCLNYSNDKSVEAES

Homology

[Close]

BLAST of Lag0038519 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 143.3 bits (360), Expect = 3.3e-30
Identity = 62/129 (48.06%), Postives = 85/129 (65.89%), Query Frame = 0


Query: 1   MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDIT 60
           +EF  V FW+H  +LPM   N +MA RLGNAIG+F + D   +G+ W  SLR+RV +DIT
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 61  KLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHNFKSC-SQYLNEVFSVSPKHE 120
           K  + GIK+ + G +G CW PI+YE+LP+ C FCGVIGH+   C ++YL          E
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

Query: 121 YGPWMQYSG 129
           YGPW+++ G
Sbjct: 241 YGPWLRFVG 249

[Close]

BLAST of Lag0038519 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 127.1 bits (318), Expect = 2.5e-25
Identity = 59/128 (46.09%), Postives = 78/128 (60.94%), Query Frame = 0


Query: 1   MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDIT 60
           M+FR V+ WVHF +L +   N +MA RLGNAIG FE+ +     + W   LRVRVR D+ 
Sbjct: 122 MDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVM 181

Query: 61  KLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHNFKSCSQYLNEVFSVSPKHEY 120
           K    GIK+ L G +G CW PI+YE+LP+    CG + H  K CS     V SVS   +Y
Sbjct: 182 KPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCC--VDSVSKNLQY 241

Query: 121 GPWMQYSG 129
           GPW+++ G
Sbjct: 242 GPWLRFQG 247

[Close]

BLAST of Lag0038519 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 104.0 bits (258), Expect = 2.2e-18
Identity = 65/210 (30.95%), Postives = 97/210 (46.19%), Query Frame = 0


Query: 1   MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDIT 60
           ++F  +  WV F +LP+      MA RLGNA+G FEE D  +    W  +LRVRV LDI+
Sbjct: 122 LDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDIS 181

Query: 61  KLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHNFKSCSQYLNEVFSVSPKHEY 120
           K  + GIK+ L G +G  W PI+YE+LP+ C  CG               + S   KH+Y
Sbjct: 182 KPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCG---------------LSSSRKKHQY 241

Query: 121 GPWMQYSGR---TTMMYRSASNSPLSKHKNMSTNLGGAGMSVQNMIVDDIETTSLTAVSE 180
           G W++Y G    T    +      L K  N S +   + +   +  V     T   A+  
Sbjct: 242 GSWLRYQGTVKPTMPQMKQPQEDLLDKSGNNSFSSSTSPVGAGSQGVQSAPATGPIAIPM 301

Query: 181 AKLMDILPAAMIEPQMPPLMENNIAINDGQ 208
              +   P    EP      ++ + I++G+
Sbjct: 302 ESPVTETPKKGAEPSQQG--KSPVLIDEGE 314

[Close]

BLAST of Lag0038519 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 98.6 bits (244), Expect = 9.4e-17
Identity = 52/140 (37.14%), Postives = 78/140 (55.71%), Query Frame = 0


Query: 1   MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWR-ESLRVRVRLDI 60
           M F F  FW+    +P +  +  MA  LG  +G  EE + G+   GW    +RVRV++D+
Sbjct: 118 MNFNFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIE-GDGADGWAGPFIRVRVKIDV 177

Query: 61  TKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHNFKSCSQYLNEVFSVSPKHE 120
           +K  + GIK+    G    W P+RYEKLP+ C  CG IGH+ + C Q    V + SP+ +
Sbjct: 178 SKPLRRGIKLKNSDG-KDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPE-Q 237

Query: 121 YGPWMQYSGRTTMMYRSASN 140
           YG W+    R T++ +S S+
Sbjct: 238 YGDWL----RATLLKKSVSH 250

[Close]

BLAST of Lag0038519 vs. NCBI nr
Match: XP_042952131.1 (uncharacterized protein LOC122289219 [Carya illinoinensis])

HSP 1 Score: 98.6 bits (244), Expect = 9.4e-17
Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 0


Query: 7   TFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHG 66
           +FW+   E+P++  N  +   +GN IG  EE D+      W E +R+RVR+DI++    G
Sbjct: 125 SFWIRMYEMPLNAMNEEVGRIIGNKIGFVEEVDEEQGEAAWGEFMRIRVRMDISQPLMRG 184

Query: 67  IKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHNFKSCSQYLNEVFSVSPKHEYGPWM-- 126
           ++V L G  G CW    YE+LP  C +CG +GH FK C    ++    S    +G W+  
Sbjct: 185 VRVKL-GQYGICWIRFAYERLPNFCYWCGKLGHQFKDCEGVGHQEIRASANLPFGAWLLA 244

Query: 127 --------QYSGRTTMMYRSAS-NSPLSKHK 147
                   +  G  T ++R++S  +PL   K
Sbjct: 245 GSLMGSGEKNVGIQTFVHRNSSPEAPLESEK 274

[Close]

BLAST of Lag0038519 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.6e-30
Identity = 62/129 (48.06%), Postives = 85/129 (65.89%), Query Frame = 0


Query: 1   MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDIT 60
           +EF  V FW+H  +LPM   N +MA RLGNAIG+F + D   +G+ W  SLR+RV +DIT
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 61  KLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHNFKSC-SQYLNEVFSVSPKHE 120
           K  + GIK+ + G +G CW PI+YE+LP+ C FCGVIGH+   C ++YL          E
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

Query: 121 YGPWMQYSG 129
           YGPW+++ G
Sbjct: 241 YGPWLRFVG 249

[Close]

BLAST of Lag0038519 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.2e-25
Identity = 59/128 (46.09%), Postives = 78/128 (60.94%), Query Frame = 0


Query: 1   MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDIT 60
           M+FR V+ WVHF +L +   N +MA RLGNAIG FE+ +     + W   LRVRVR D+ 
Sbjct: 122 MDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVM 181

Query: 61  KLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHNFKSCSQYLNEVFSVSPKHEY 120
           K    GIK+ L G +G CW PI+YE+LP+    CG + H  K CS     V SVS   +Y
Sbjct: 182 KPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCC--VDSVSKNLQY 241

Query: 121 GPWMQYSG 129
           GPW+++ G
Sbjct: 242 GPWLRFQG 247

[Close]

BLAST of Lag0038519 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-18
Identity = 65/210 (30.95%), Postives = 97/210 (46.19%), Query Frame = 0


Query: 1   MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDIT 60
           ++F  +  WV F +LP+      MA RLGNA+G FEE D  +    W  +LRVRV LDI+
Sbjct: 122 LDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDIS 181

Query: 61  KLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHNFKSCSQYLNEVFSVSPKHEY 120
           K  + GIK+ L G +G  W PI+YE+LP+ C  CG               + S   KH+Y
Sbjct: 182 KPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCG---------------LSSSRKKHQY 241

Query: 121 GPWMQYSGR---TTMMYRSASNSPLSKHKNMSTNLGGAGMSVQNMIVDDIETTSLTAVSE 180
           G W++Y G    T    +      L K  N S +   + +   +  V     T   A+  
Sbjct: 242 GSWLRYQGTVKPTMPQMKQPQEDLLDKSGNNSFSSSTSPVGAGSQGVQSAPATGPIAIPM 301

Query: 181 AKLMDILPAAMIEPQMPPLMENNIAINDGQ 208
              +   P    EP      ++ + I++G+
Sbjct: 302 ESPVTETPKKGAEPSQQG--KSPVLIDEGE 314

[Close]

BLAST of Lag0038519 vs. ExPASy TrEMBL
Match: A0A803QQH9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.7e-17
Identity = 49/134 (36.57%), Postives = 71/134 (52.99%), Query Frame = 0


Query: 2   EFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITK 61
           + +F  FWV    LP      ++A  LGN IG FE+  + +   GW   LR+RV +D+TK
Sbjct: 41  DLKFTPFWVQVYRLPFLSKTKTLAVALGNIIGKFEDVFEDSLNEGWGPFLRIRVLMDVTK 100

Query: 62  LFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHNFKSCSQYLNEVFS-VSPKHEY 121
             + G  + LG      W   RYE+LPE C  CG+IGH +  CS +L ++ +   P  EY
Sbjct: 101 PLKRGRMISLGHVKDKFWVDFRYERLPEYCMECGIIGHPYNKCSVFLEKLDNGEEPALEY 160

Query: 122 GPWMQYSGRTTMMY 135
            P+++ S   T  Y
Sbjct: 161 QPFIKGSPLPTSSY 174

[Close]

BLAST of Lag0038519 vs. ExPASy TrEMBL
Match: A0A2N9GWE9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31787 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.7e-17
Identity = 48/128 (37.50%), Postives = 68/128 (53.12%), Query Frame = 0


Query: 1   MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDIT 60
           ++F +  FWV F  +P+        E++G+  G  EE D    G GW   LRVR+ LDIT
Sbjct: 120 VQFSWCCFWVQFYGVPLSYMTKQTGEQVGSVFGKVEEVDVSEDGVGWGTYLRVRICLDIT 179

Query: 61  KLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHNFKSC-SQYLNEVFSVSPKHE 120
           K    G +V+    LG  W   +YE+LP +C  CG+IGH  + C S+  N   S     +
Sbjct: 180 KPIPRG-RVVTFNSLGQMWVSFKYERLPWLCFHCGLIGHLERDCVSRGKNNSSSPGGVQQ 239

Query: 121 YGPWMQYS 128
           YGPW++ S
Sbjct: 240 YGPWLRAS 246

[Close]

BLAST of Lag0038519 vs. TAIR 10
Match: AT2G01050.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 43.5 bits (101), Expect = 3.4e-04
Identity = 28/107 (26.17%), Postives = 46/107 (42.99%), Query Frame = 0


Query: 9   WVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIK 68
           WV    +P + Y+  +   +   +G   + D     +      RV + +++ K  + G  
Sbjct: 167 WVRLSNIPYNYYHRCLLMEIARGLGRPLKVDMNTINFDKGRFARVCIEVNLAKPLK-GTV 226

Query: 69  VILGGGLGSCWTPIRYEKLPEICSFCGVIGHNFKSCSQYLNEVFSVS 116
           +I G         + YE L +ICS CG+ GH   SC +  N V  VS
Sbjct: 227 LINGDRYF-----VAYEGLSKICSSCGIYGHLVHSCPR--NVVVKVS 265

The following BLAST results are available for this feature:

BLAST of Lag0038519 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156185.1	3.3e-30	48.06	uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha...	[more]
XP_022132681.1	2.5e-25	46.09	uncharacterized protein LOC111005481 [Momordica charantia]	[more]
XP_022158377.1	2.2e-18	30.95	uncharacterized protein LOC111024874 [Momordica charantia]	[more]
XP_022149484.1	9.4e-17	37.14	uncharacterized protein LOC111017902 [Momordica charantia]	[more]
XP_042952131.1	9.4e-17	32.45	uncharacterized protein LOC122289219 [Carya illinoinensis]	[more]

BLAST of Lag0038519 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0038519 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DU55	1.6e-30	48.06	uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1BSZ1	1.2e-25	46.09	uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1DX30	1.1e-18	30.95	uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A803QQH9	2.7e-17	36.57	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A2N9GWE9	2.7e-17	37.50	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31787 PE=4 SV=1	[more]

BLAST of Lag0038519 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01050.1	3.4e-04	26.17	zinc ion binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 2..55 e-value: 3.9E-8 score: 32.9
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 57..105 e-value: 4.1E-10 score: 39.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..270
None	No IPR available	PANTHER	PTHR31286:SF84	SUBFAMILY NOT NAMED	coord: 5..162
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 5..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0038519.1	Lag0038519.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding