Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGAAGAGAGCCCTGACGAGAATCAAGAAAATCAGACTGACGAGGTGCGAGGCGAGCAGACGGAGGTAGTGCTTGAAAAGAGAATGAACAAGAGCAAACGGTGCGTGTTGAGGTCATCATGCCCGAAGCACCTAAACGAAGTCGCGTTAAGCGAAAGGCTGGGGGTATTCAGGTGATTCGAACTGATACCCATCACCACCAACGTCGGACTCTGAATGAGAGAATGTAGGAAGAGAAGAACGAGAAAAGAAGGAAGCTGAGGATAAGGCAAGAGAGGAAGAAGCAAAGAAGGCGGAGGAAGAGATTTTGCTCAAACGAAGGGAAGACAGAGGCAAAGGAATTGCTGAAGCATCGGATGAACCTGTGGAGGGACCTTTATCCGCTTCATTAATGAGCTTGCTCGAGCAAAATACCAAGAGATGCTACGTAGGGATATTTTTATTCGAAAGAGGGTTCGGTGATGATCTCCCCATTTCTTACGAGCAGGAATAGCGAATCTTGGGTGGAGCCAGTTCTGTGCGAAACCAGACCCAGTGACTTCGAATATTGTTCGAGAATTCTATGTGAATATTGATAATGCAGAGGAGTTTCAGGCCATAGTTCGAGGAGTATCTGTTGACTGGAGCCCAGGAGCTATCAACTCGTTATTCAACCTTCAGGACTTCCCACACGCAGGCTTTAATGAAATGGTCGTGGCACCGCCTAGTGATCAGTTGAATGCGGCGGTCCAAGAGGTTGGAATTGATGGGGCTCAGTGGAGGCTATCTAAGACGGAGAAACACACGTTTCAAGCTGCATATCTAAAGAGTGAAGTCAATACTTGGTTGGGCTTCATCAAGCTGCGTTTGCTGCCGACTACGCATGATTCAACAATGTCTCGTGAACAGGTGCTTCTGATATTCGCTATTCTTTGA
mRNA sequence
ATGCAGGAAGAGAGCCCTGACGAGAATCAAGAAAATCAGACTGACGAGGTGCGAGGCGAGCAGACGGAGGTAGTGCTTGAAAAGAGAATGAACAAGAGCAAACGGTGCGTGTTGAGGTCATCATGCCCGAAGCACCTAAACGAAGTCGCGTTAAGCGAAAGGCTGGGGGTATTCAGAGAAGAACGAGAAAAGAAGGAAGCTGAGGATAAGGCAAGAGAGGAAGAAGCAAAGAAGGCGGAGGAAGAGATTTTGCTCAAACGAAGGGAAGACAGAGGCAAAGGAATTGCTGAAGCATCGGATGAACCTGTGGAGGGACCTTTATCCGCTTCATTAATGAGCTTGCTCGAGCAAAATACCAAGAGATGCTACTTCTGTGCGAAACCAGACCCAGTGACTTCGAATATTGTTCGAGAATTCTATGTGAATATTGATAATGCAGAGGAGTTTCAGGCCATAGTTCGAGGAGTATCTGTTGACTGGAGCCCAGGAGCTATCAACTCGTTATTCAACCTTCAGGACTTCCCACACGCAGGCTTTAATGAAATGGTCGTGGCACCGCCTAGTGATCAGTTGAATGCGGCGGTCCAAGAGGTTGGAATTGATGGGGCTCAGTGGAGGCTATCTAAGACGGAGAAACACACGTTTCAAGCTGCATATCTAAAGAGTGAAGTCAATACTTGGTTGGGCTTCATCAAGCTGCGTTTGCTGCCGACTACGCATGATTCAACAATGTCTCGTGAACAGGTGCTTCTGATATTCGCTATTCTTTGA
Coding sequence (CDS)
ATGCAGGAAGAGAGCCCTGACGAGAATCAAGAAAATCAGACTGACGAGGTGCGAGGCGAGCAGACGGAGGTAGTGCTTGAAAAGAGAATGAACAAGAGCAAACGGTGCGTGTTGAGGTCATCATGCCCGAAGCACCTAAACGAAGTCGCGTTAAGCGAAAGGCTGGGGGTATTCAGAGAAGAACGAGAAAAGAAGGAAGCTGAGGATAAGGCAAGAGAGGAAGAAGCAAAGAAGGCGGAGGAAGAGATTTTGCTCAAACGAAGGGAAGACAGAGGCAAAGGAATTGCTGAAGCATCGGATGAACCTGTGGAGGGACCTTTATCCGCTTCATTAATGAGCTTGCTCGAGCAAAATACCAAGAGATGCTACTTCTGTGCGAAACCAGACCCAGTGACTTCGAATATTGTTCGAGAATTCTATGTGAATATTGATAATGCAGAGGAGTTTCAGGCCATAGTTCGAGGAGTATCTGTTGACTGGAGCCCAGGAGCTATCAACTCGTTATTCAACCTTCAGGACTTCCCACACGCAGGCTTTAATGAAATGGTCGTGGCACCGCCTAGTGATCAGTTGAATGCGGCGGTCCAAGAGGTTGGAATTGATGGGGCTCAGTGGAGGCTATCTAAGACGGAGAAACACACGTTTCAAGCTGCATATCTAAAGAGTGAAGTCAATACTTGGTTGGGCTTCATCAAGCTGCGTTTGCTGCCGACTACGCATGATTCAACAATGTCTCGTGAACAGGTGCTTCTGATATTCGCTATTCTTTGA
Protein sequence
MQEESPDENQENQTDEVRGEQTEVVLEKRMNKSKRCVLRSSCPKHLNEVALSERLGVFREEREKKEAEDKAREEEAKKAEEEILLKRREDRGKGIAEASDEPVEGPLSASLMSLLEQNTKRCYFCAKPDPVTSNIVREFYVNIDNAEEFQAIVRGVSVDWSPGAINSLFNLQDFPHAGFNEMVVAPPSDQLNAAVQEVGIDGAQWRLSKTEKHTFQAAYLKSEVNTWLGFIKLRLLPTTHDSTMSREQVLLIFAIL
Homology
BLAST of Lag0038505 vs. NCBI nr
Match:
PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])
HSP 1 Score: 90.9 bits (224), Expect = 1.7e-14
Identity = 67/203 (33.00%), Postives = 101/203 (49.75%), Query Frame = 0
Query: 54 RLGVFREEREKKEAEDKAREEEAKKAEEEILLKRREDRGKGIAEASDEPVEGPLSASLMS 113
R+G+ R R+ +A K E A E + R + KG + E + G L
Sbjct: 9 RMGIKRVARKAHKAV-KFETEAAATRYENNIQNRPLNAEKGFVLDNSETM-GQLPFIAQV 68
Query: 114 LLEQNTKRCYFCAKPDPVTSNIVREFYVNIDNAEEFQAIVRGVSVDWSPGAINSLFNLQD 173
+ + N K+ FCA P+ +VREFY N+ + EE VRGV V WS AIN++F L D
Sbjct: 69 ITQHNWKQ--FCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD 128
Query: 174 FPHAGFNEMVVAPPSDQLNAAVQEVGIDGAQWRLSKTEKHTFQAAYLKSEVNTWLGFIKL 233
P +E + L ++ V GA+W +S +T + L W F+K
Sbjct: 129 -PVDEHSEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKS 188
Query: 234 RLLPTTHDSTMSREQVLLIFAIL 257
RLLPTTH T+S++++LL+ ++L
Sbjct: 189 RLLPTTHGKTVSKDRMLLLHSML 206
BLAST of Lag0038505 vs. NCBI nr
Match:
PON50458.1 (hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii])
HSP 1 Score: 87.4 bits (215), Expect = 1.9e-13
Identity = 47/124 (37.90%), Postives = 71/124 (57.26%), Query Frame = 0
Query: 135 IVREFYVNIDNAEEFQAIVRGVSVDWSPGAINSLFNLQDF--PHAGFNEMVVAPPSDQLN 194
+VREFY N+ N ++ VRGV V S AIN+++ L D H+ F E + P +L
Sbjct: 3 LVREFYTNLTNPDDDTVYVRGVQVPLSAEAINTIYGLGDLVDEHSEFVEDITEP---ELA 62
Query: 195 AAVQEVGIDGAQWRLSKTEKHTFQAAYLKSEVNTWLGFIKLRLLPTTHDSTMSREQVLLI 254
++ V I GA+W +S +T + L W F+K RLLPTTH +S+E+VLL+
Sbjct: 63 MVLETVAIAGAEWNVSSQGVYTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKERVLLL 122
Query: 255 FAIL 257
+++L
Sbjct: 123 YSML 123
BLAST of Lag0038505 vs. NCBI nr
Match:
PON70375.1 (hypothetical protein PanWU01x14_080440 [Parasponia andersonii])
HSP 1 Score: 87.0 bits (214), Expect = 2.5e-13
Identity = 68/201 (33.83%), Postives = 106/201 (52.74%), Query Frame = 0
Query: 61 EREKKEAEDKAREEEAKKAE---EEILLKRREDRGKGIAEASDEPVEGPLSASLMSLLEQ 120
ER + A KA + E+K AE EE + R K + +P+E P + + +++
Sbjct: 34 ERVARNA-SKAVKFESKAAEIRYEENIQNRPLSVEKEFVWDNSKPLEQPPFIADV-IIQH 93
Query: 121 NTKRCYFCAKPDPVTSNIVREFYVNIDNAEEFQAIVRGVSVDWSPGAINSLFNLQD--FP 180
N + FCA P+ +VREFY N+ N ++ +RGV V S AIN++F+L D
Sbjct: 94 NWQ--LFCAHPEDPIVPLVREFYTNMTNPDDDTVYIRGVQVPLSVEAINTIFSLGDPIDE 153
Query: 181 HAGFNEMVVAPPSDQLNAAVQEVGIDGAQWRLSKTEKHTFQAAYLKSEVNTWLGFIKLRL 240
H+ F E + P +L ++ V I GA+W +S +T + L W F+K RL
Sbjct: 154 HSEFVEDITKP---ELVIVLETVAIVGAEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRL 213
Query: 241 LPTTHDSTMSREQVLLIFAIL 257
LPTTH T+S+E V L++++L
Sbjct: 214 LPTTHGKTVSKEHVSLLYSML 227
BLAST of Lag0038505 vs. NCBI nr
Match:
PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])
HSP 1 Score: 87.0 bits (214), Expect = 2.5e-13
Identity = 64/202 (31.68%), Postives = 100/202 (49.50%), Query Frame = 0
Query: 55 LGVFREEREKKEAEDKAREEEAKKAEEEILLKRREDRGKGIAEASDEPVEGPLSASLMSL 114
+G+ R R+ +A K E A+ E + R + KG + E + G L +
Sbjct: 1 MGIKRVARKAHKAV-KFETEAAETRYENNIQNRPLNAEKGFVLDNSETM-GQLPFIAQVI 60
Query: 115 LEQNTKRCYFCAKPDPVTSNIVREFYVNIDNAEEFQAIVRGVSVDWSPGAINSLFNLQDF 174
+ N K+ FCA P+ +VREFY N+ + E VRGV V WS AIN++F L D
Sbjct: 61 TQHNWKQ--FCAHPEDPIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGD- 120
Query: 175 PHAGFNEMVVAPPSDQLNAAVQEVGIDGAQWRLSKTEKHTFQAAYLKSEVNTWLGFIKLR 234
P +E + L ++ V + GA+W +S +T + L W F+K
Sbjct: 121 PVDEHSEFIENITEHDLITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSH 180
Query: 235 LLPTTHDSTMSREQVLLIFAIL 257
LLPTTH T+S++++LL+ ++L
Sbjct: 181 LLPTTHGKTVSKDRMLLLHSML 197
BLAST of Lag0038505 vs. NCBI nr
Match:
PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])
HSP 1 Score: 86.7 bits (213), Expect = 3.3e-13
Identity = 47/124 (37.90%), Postives = 70/124 (56.45%), Query Frame = 0
Query: 135 IVREFYVNIDNAEEFQAIVRGVSVDWSPGAINSLFNLQD--FPHAGFNEMVVAPPSDQLN 194
+VREFY N+ + EE VRGV V WS AIN++F L D H+ F E + P +L
Sbjct: 16 LVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEP---ELI 75
Query: 195 AAVQEVGIDGAQWRLSKTEKHTFQAAYLKSEVNTWLGFIKLRLLPTTHDSTMSREQVLLI 254
++ V GA+W +S +T + L W F+K RLLPTTH +S++++LL+
Sbjct: 76 TVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLL 135
Query: 255 FAIL 257
++L
Sbjct: 136 HSML 136
BLAST of Lag0038505 vs. ExPASy TrEMBL
Match:
A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)
HSP 1 Score: 90.9 bits (224), Expect = 8.4e-15
Identity = 67/203 (33.00%), Postives = 101/203 (49.75%), Query Frame = 0
Query: 54 RLGVFREEREKKEAEDKAREEEAKKAEEEILLKRREDRGKGIAEASDEPVEGPLSASLMS 113
R+G+ R R+ +A K E A E + R + KG + E + G L
Sbjct: 9 RMGIKRVARKAHKAV-KFETEAAATRYENNIQNRPLNAEKGFVLDNSETM-GQLPFIAQV 68
Query: 114 LLEQNTKRCYFCAKPDPVTSNIVREFYVNIDNAEEFQAIVRGVSVDWSPGAINSLFNLQD 173
+ + N K+ FCA P+ +VREFY N+ + EE VRGV V WS AIN++F L D
Sbjct: 69 ITQHNWKQ--FCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD 128
Query: 174 FPHAGFNEMVVAPPSDQLNAAVQEVGIDGAQWRLSKTEKHTFQAAYLKSEVNTWLGFIKL 233
P +E + L ++ V GA+W +S +T + L W F+K
Sbjct: 129 -PVDEHSEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKS 188
Query: 234 RLLPTTHDSTMSREQVLLIFAIL 257
RLLPTTH T+S++++LL+ ++L
Sbjct: 189 RLLPTTHGKTVSKDRMLLLHSML 206
BLAST of Lag0038505 vs. ExPASy TrEMBL
Match:
A0A2P5BNT0 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_223230 PE=4 SV=1)
HSP 1 Score: 87.4 bits (215), Expect = 9.3e-14
Identity = 47/124 (37.90%), Postives = 71/124 (57.26%), Query Frame = 0
Query: 135 IVREFYVNIDNAEEFQAIVRGVSVDWSPGAINSLFNLQDF--PHAGFNEMVVAPPSDQLN 194
+VREFY N+ N ++ VRGV V S AIN+++ L D H+ F E + P +L
Sbjct: 3 LVREFYTNLTNPDDDTVYVRGVQVPLSAEAINTIYGLGDLVDEHSEFVEDITEP---ELA 62
Query: 195 AAVQEVGIDGAQWRLSKTEKHTFQAAYLKSEVNTWLGFIKLRLLPTTHDSTMSREQVLLI 254
++ V I GA+W +S +T + L W F+K RLLPTTH +S+E+VLL+
Sbjct: 63 MVLETVAIAGAEWNVSSQGVYTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKERVLLL 122
Query: 255 FAIL 257
+++L
Sbjct: 123 YSML 123
BLAST of Lag0038505 vs. ExPASy TrEMBL
Match:
A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 1.2e-13
Identity = 64/202 (31.68%), Postives = 100/202 (49.50%), Query Frame = 0
Query: 55 LGVFREEREKKEAEDKAREEEAKKAEEEILLKRREDRGKGIAEASDEPVEGPLSASLMSL 114
+G+ R R+ +A K E A+ E + R + KG + E + G L +
Sbjct: 1 MGIKRVARKAHKAV-KFETEAAETRYENNIQNRPLNAEKGFVLDNSETM-GQLPFIAQVI 60
Query: 115 LEQNTKRCYFCAKPDPVTSNIVREFYVNIDNAEEFQAIVRGVSVDWSPGAINSLFNLQDF 174
+ N K+ FCA P+ +VREFY N+ + E VRGV V WS AIN++F L D
Sbjct: 61 TQHNWKQ--FCAHPEDPIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGD- 120
Query: 175 PHAGFNEMVVAPPSDQLNAAVQEVGIDGAQWRLSKTEKHTFQAAYLKSEVNTWLGFIKLR 234
P +E + L ++ V + GA+W +S +T + L W F+K
Sbjct: 121 PVDEHSEFIENITEHDLITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSH 180
Query: 235 LLPTTHDSTMSREQVLLIFAIL 257
LLPTTH T+S++++LL+ ++L
Sbjct: 181 LLPTTHGKTVSKDRMLLLHSML 197
BLAST of Lag0038505 vs. ExPASy TrEMBL
Match:
A0A2P5DAQ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE=4 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 1.2e-13
Identity = 68/201 (33.83%), Postives = 106/201 (52.74%), Query Frame = 0
Query: 61 EREKKEAEDKAREEEAKKAE---EEILLKRREDRGKGIAEASDEPVEGPLSASLMSLLEQ 120
ER + A KA + E+K AE EE + R K + +P+E P + + +++
Sbjct: 34 ERVARNA-SKAVKFESKAAEIRYEENIQNRPLSVEKEFVWDNSKPLEQPPFIADV-IIQH 93
Query: 121 NTKRCYFCAKPDPVTSNIVREFYVNIDNAEEFQAIVRGVSVDWSPGAINSLFNLQD--FP 180
N + FCA P+ +VREFY N+ N ++ +RGV V S AIN++F+L D
Sbjct: 94 NWQ--LFCAHPEDPIVPLVREFYTNMTNPDDDTVYIRGVQVPLSVEAINTIFSLGDPIDE 153
Query: 181 HAGFNEMVVAPPSDQLNAAVQEVGIDGAQWRLSKTEKHTFQAAYLKSEVNTWLGFIKLRL 240
H+ F E + P +L ++ V I GA+W +S +T + L W F+K RL
Sbjct: 154 HSEFVEDITKP---ELVIVLETVAIVGAEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRL 213
Query: 241 LPTTHDSTMSREQVLLIFAIL 257
LPTTH T+S+E V L++++L
Sbjct: 214 LPTTHGKTVSKEHVSLLYSML 227
BLAST of Lag0038505 vs. ExPASy TrEMBL
Match:
A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)
HSP 1 Score: 86.7 bits (213), Expect = 1.6e-13
Identity = 47/124 (37.90%), Postives = 70/124 (56.45%), Query Frame = 0
Query: 135 IVREFYVNIDNAEEFQAIVRGVSVDWSPGAINSLFNLQD--FPHAGFNEMVVAPPSDQLN 194
+VREFY N+ + EE VRGV V WS AIN++F L D H+ F E + P +L
Sbjct: 16 LVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEP---ELI 75
Query: 195 AAVQEVGIDGAQWRLSKTEKHTFQAAYLKSEVNTWLGFIKLRLLPTTHDSTMSREQVLLI 254
++ V GA+W +S +T + L W F+K RLLPTTH +S++++LL+
Sbjct: 76 TVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLL 135
Query: 255 FAIL 257
++L
Sbjct: 136 HSML 136
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
PON46472.1 | 1.7e-14 | 33.00 | hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii] | [more] |
PON50458.1 | 1.9e-13 | 37.90 | hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii] | [more] |
PON70375.1 | 2.5e-13 | 33.83 | hypothetical protein PanWU01x14_080440 [Parasponia andersonii] | [more] |
PON35554.1 | 2.5e-13 | 31.68 | hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii] | [more] |
PON78020.1 | 3.3e-13 | 37.90 | hypothetical protein PanWU01x14_023740 [Parasponia andersonii] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2P5BCG4 | 8.4e-15 | 33.00 | Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... | [more] |
A0A2P5BNT0 | 9.3e-14 | 37.90 | Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... | [more] |
A0A2P5AGA5 | 1.2e-13 | 31.68 | Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... | [more] |
A0A2P5DAQ2 | 1.2e-13 | 33.83 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE... | [more] |
A0A2P5DXM3 | 1.6e-13 | 37.90 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE... | [more] |
Match Name | E-value | Identity | Description | |