Lag0038494 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0038494
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr2: 18712875 .. 18714506 (+)
RNA-Seq ExpressionLag0038494
SyntenyLag0038494
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGACCAAGACGACCTCATAATAAGGGTCCAAAGGTCTTTCGATTTGAAGAAGTGTGGGCTCAACAACCAGAATGCAAGCACATCATTGATGGTGAAGGTAGTTGGAAGGTTGGGTCGTCAGGTACTCCACGCCTTGAATATTGTCTCACCAACTGCAGAAGGAGGTTGCAAAGGTGGGGCAAAGGTACAATTGCTACAATTCACAGAGACATCCATCGATTACAGGCAAGTCTTCAAGAGCTGTATAGTAGACCACCCCCTTGGGACTTTGATGCGATTAAATTGACTGAAAACCAATTAGACAGAGTTTTGGAGGAGGATGAAATATACTGGAAACAGAGATCTCGGGAGAACTGGCAAAGTGGAGCGACCGAAACACTAGATGGTTTCACTCACGAGCCACTACCAGAAGACGACGAAACAAAATTAGTGTTATAGAAGATGGATACGGTGGATGGATAACGGATAGACAACAATTGGAGGGGGCCTTCCAATCTTATTTTCAAACTTTATTTTCATTTATTAACCCATCTTCTGATGTTATGGCTAATGCTTTACCGGACATACAGGAGAAGGTAACTGCGGATATGAATGCAAAGTTATTAACACCTTTTTAAGAGCGAAGATTGAAAGAGCAATTAAGCAGATGCACCCGTCAAAAGCGCCTGGCCCAGATGGTTTTCCATCAATTTTCTATCAGAAGTTCTGGTCTGAGGTTGGTGACACAACTATTTTAAATTGCCTGAAATTTTTAAATCAATCTCGTTCTGTTGGTGCCTGGAATCATACTTATGTTGCGCTCATTCCTAAATTAAATACTCCTAAAAAGTTGTAAGATTATCGTCCCATCAGTTTATGCAATGTGGCATACAAAATATTAGCAAATGTTCTAGTTAATAGGATGAAAGGGGTCCTTTAAGATGTTATTTCGAAAAACCAATCTGCTTTTGTTTTTGGGAAGTCTATTTTTTATAATATTATTGTGGGTCATGAATGTTTGCATACTATTAAATCTAGAAGAAAGTGTCATAAGGGGTGGATAGCATTAAAACTTGATATGAGCAAAGCATATGATCAGGTCGAATGGAGTTTTCTGGAAAGTCTGATGCTGAAGATTTGTTTTCACCCAAATTGGGTGGCTCTGATTATCGGCTGTGTAAAAACTGCAAAATTTTCAGTCTTATTAAATGAGGTGCCGTCAGGACACATAGTACCGCAACAGGGTCTTCGACAAGGTGACCCACTCTCACCCTATTTATTTTTGCTTTGTTCGAAAACCCTCTCTTCTATGATAAATGGGGCTATGGTTTTGTAACGCCTGTAATTTAAGATAAATTTCAAATTTCCTAGGTTGGAGTTAATTTGGAATTTAGAGGGAAATTTTCAAAATTTAAGATAAATTTTCTGAAAATTTAAAAATTTGGGCTAGAGTGACATTTTTGTAAATAAACTGATGTTTAAGCCAAGCCCAAGCCTTTTAAAAGGCTGCACGCAACCTTAGGGCTCATCCGTATCTTTTTCCCTTATCTTCTCCATGAAAACCAACAACCTCTTCTCTCACATCAAGCACCCGACGACAGCCACATTTCAGCAACAACTCTGGTGACATATCTTCTCCGACGACGGTAA

mRNA sequence

ATGGGACCAAGACGACCTCATAATAAGGGTCCAAAGGTCTTTCGATTTGAAGAAGTGTGGGCTCAACAACCAGAATGCAAGCACATCATTGATGGTGAAGGTAGTTGGAAGGTTGGGTCGTCAGGTACTCCACGCCTTGAATATTGTCTCACCAACTGCAGAAGGAGGTTGCAAAGGTGGGGCAAAGGTACAATTGCTACAATTCACAGAGACATCCATCGATTACAGGCAAGTCTTCAAGAGCTGTATAGTAGACCACCCCCTTGGGACTTTGATGCGATTAAATTGACTGAAAACCAATTAGACAGAGTTTTGGAGGAGGATGAAATATACTGGAAACAGAGATCTCGGGAGAACTGGCAAAGTGGAGCGACCGAAACACTAGATGGAGAAGGTAACTGCGGATATGAATGCAAAGTTATTAACACCTTTTTAAGAGCGAAGATTGAAAGAGCAATTAAGCAGATGCACCCGTCAAAAGCGCCTGGCCCAGATGGTTTTCCATCAATTTTCTATCAGAAGTTCTGGTCTGAGGTCGAATGGAGTTTTCTGGAAAGTCTGATGCTGAAGATTTGTTTTCACCCAAATTGGGTGGCTCTGATTATCGGCTGTGTAAAAACTGCAAAATTTTCAGTCTTATTAAATGAGGTGCCGTCAGGACACATAGTACCGCAACAGGGTCTTCGACAAGCCAAGCCCAAGCCTTTTAAAAGGCTGCACGCAACCTTAGGGCTCATCCGTATCTTTTTCCCTTATCTTCTCCATGAAAACCAACAACCTCTTCTCTCACATCAAGCACCCGACGACAGCCACATTTCAGCAACAACTCTGGTGACATATCTTCTCCGACGACGGTAA

Coding sequence (CDS)

ATGGGACCAAGACGACCTCATAATAAGGGTCCAAAGGTCTTTCGATTTGAAGAAGTGTGGGCTCAACAACCAGAATGCAAGCACATCATTGATGGTGAAGGTAGTTGGAAGGTTGGGTCGTCAGGTACTCCACGCCTTGAATATTGTCTCACCAACTGCAGAAGGAGGTTGCAAAGGTGGGGCAAAGGTACAATTGCTACAATTCACAGAGACATCCATCGATTACAGGCAAGTCTTCAAGAGCTGTATAGTAGACCACCCCCTTGGGACTTTGATGCGATTAAATTGACTGAAAACCAATTAGACAGAGTTTTGGAGGAGGATGAAATATACTGGAAACAGAGATCTCGGGAGAACTGGCAAAGTGGAGCGACCGAAACACTAGATGGAGAAGGTAACTGCGGATATGAATGCAAAGTTATTAACACCTTTTTAAGAGCGAAGATTGAAAGAGCAATTAAGCAGATGCACCCGTCAAAAGCGCCTGGCCCAGATGGTTTTCCATCAATTTTCTATCAGAAGTTCTGGTCTGAGGTCGAATGGAGTTTTCTGGAAAGTCTGATGCTGAAGATTTGTTTTCACCCAAATTGGGTGGCTCTGATTATCGGCTGTGTAAAAACTGCAAAATTTTCAGTCTTATTAAATGAGGTGCCGTCAGGACACATAGTACCGCAACAGGGTCTTCGACAAGCCAAGCCCAAGCCTTTTAAAAGGCTGCACGCAACCTTAGGGCTCATCCGTATCTTTTTCCCTTATCTTCTCCATGAAAACCAACAACCTCTTCTCTCACATCAAGCACCCGACGACAGCCACATTTCAGCAACAACTCTGGTGACATATCTTCTCCGACGACGGTAA

Protein sequence

MGPRRPHNKGPKVFRFEEVWAQQPECKHIIDGEGSWKVGSSGTPRLEYCLTNCRRRLQRWGKGTIATIHRDIHRLQASLQELYSRPPPWDFDAIKLTENQLDRVLEEDEIYWKQRSRENWQSGATETLDGEGNCGYECKVINTFLRAKIERAIKQMHPSKAPGPDGFPSIFYQKFWSEVEWSFLESLMLKICFHPNWVALIIGCVKTAKFSVLLNEVPSGHIVPQQGLRQAKPKPFKRLHATLGLIRIFFPYLLHENQQPLLSHQAPDDSHISATTLVTYLLRRR
Homology
BLAST of Lag0038494 vs. NCBI nr
Match: XP_022841874.1 (uncharacterized protein LOC111365549 [Olea europaea var. sylvestris])

HSP 1 Score: 127.1 bits (318), Expect = 2.4e-25
Identity = 89/376 (23.67%), Postives = 145/376 (38.56%), Query Frame = 0

Query: 9    KGPKVFRFEEVWAQQPECKHIIDGEGSWKVGSSGTPRLEYCLTN---CRRRLQRWGKGTI 68
            KGPK FRFE +W  +  C  I+  + S     + +  LE  + N   C  +LQ W +   
Sbjct: 668  KGPKPFRFESMWIGEKACSDIVLNQWS----DTKSQNLESIMRNISCCSSQLQLWNRSKF 727

Query: 69   ATIHRDIHRLQASLQELYSRPPPW-DFDAIKLTENQLDRVLEEDEIYWKQRSRENW---- 128
              +  ++++ +  L ++  + P   + +A++ +  ++   ++ +E+ WKQ+ R  W    
Sbjct: 728  GRVQAELNKARTKLSQIQKKDPATINTEALRTSAEKVQTWMDREELMWKQQPRAAWLEQG 787

Query: 129  ----------------QSGATETLDGE------GNC------------------------ 188
                             +  T+ LD +      G C                        
Sbjct: 788  DQNTRYFHAKASQRRKTNSITKLLDDQGCWQDGGACNRLITNYFSDLFSSTGSRNHAAVL 847

Query: 189  -GYECK--------VINTFLRAKIERAIKQMHPSKAPGPDGFPSIFYQKFW--------- 248
               ECK        +I TF   ++ +A+K+MHP+KAPGPD  P +F+Q+FW         
Sbjct: 848  DNLECKLTYDMNIDLIQTFTEIEVSQALKEMHPTKAPGPDSMPPLFFQQFWPLIGSSVTN 907

BLAST of Lag0038494 vs. NCBI nr
Match: XP_039791740.1 (uncharacterized protein LOC120657488 isoform X1 [Panicum virgatum])

HSP 1 Score: 117.9 bits (294), Expect = 1.5e-22
Identity = 78/277 (28.16%), Postives = 125/277 (45.13%), Query Frame = 0

Query: 14  FRFEEVWAQQPECKHIIDGEGSWKVGSSGTPRLEYCLTNCRR---RLQRWGKGTIATIHR 73
           F++E +WA+ P+   I+  E  WK    G   L+   +N  R    L+ W   T  +I +
Sbjct: 247 FKYEAMWARAPDYNDIV--EKKWKEDFEGPRNLQSFWSNLSRMATSLKHWSSRTFGSIRK 306

Query: 74  DIHRLQASLQEL--YSRPPPWDFDAIKLTENQLDRVLEEDEIYWKQRSRENW-QSGATET 133
           +I +L+  L  L   S  P +  +  ++ E +L  + E +EI  +QRSR +W Q+G   T
Sbjct: 307 EIKKLERQLAMLRSSSATPAFSVEERRI-ERKLCDLFECEEIMARQRSRVDWLQAGDRNT 366

Query: 134 LDGEGNC----------------GYECKVINTFLRAKIERAIKQMHPSKAPGPDGFPSIF 193
                                  G  C+        +I  A+ QM P+KAPGPDGFP++F
Sbjct: 367 SFFHARASARRKTNRISYLLREDGTRCEDREELKDEEIREALFQMGPTKAPGPDGFPALF 426

Query: 194 YQKFW----------------------SEVEWSFLESLMLKICFHPNWVALIIGCVKTAK 246
           YQ+ W                        VEW +L+ ++ K+ F   W+  ++ CV   +
Sbjct: 427 YQRHWDFLQADICTAVRDFLQDMMKAYDRVEWKYLQGVLSKMGFADGWIQTVMKCVTKVR 486

BLAST of Lag0038494 vs. NCBI nr
Match: XP_039791741.1 (uncharacterized protein LOC120657488 isoform X2 [Panicum virgatum])

HSP 1 Score: 117.9 bits (294), Expect = 1.5e-22
Identity = 78/277 (28.16%), Postives = 125/277 (45.13%), Query Frame = 0

Query: 14  FRFEEVWAQQPECKHIIDGEGSWKVGSSGTPRLEYCLTNCRR---RLQRWGKGTIATIHR 73
           F++E +WA+ P+   I+  E  WK    G   L+   +N  R    L+ W   T  +I +
Sbjct: 247 FKYEAMWARAPDYNDIV--EKKWKEDFEGPRNLQSFWSNLSRMATSLKHWSSRTFGSIRK 306

Query: 74  DIHRLQASLQEL--YSRPPPWDFDAIKLTENQLDRVLEEDEIYWKQRSRENW-QSGATET 133
           +I +L+  L  L   S  P +  +  ++ E +L  + E +EI  +QRSR +W Q+G   T
Sbjct: 307 EIKKLERQLAMLRSSSATPAFSVEERRI-ERKLCDLFECEEIMARQRSRVDWLQAGDRNT 366

Query: 134 LDGEGNC----------------GYECKVINTFLRAKIERAIKQMHPSKAPGPDGFPSIF 193
                                  G  C+        +I  A+ QM P+KAPGPDGFP++F
Sbjct: 367 SFFHARASARRKTNRISYLLREDGTRCEDREELKDEEIREALFQMGPTKAPGPDGFPALF 426

Query: 194 YQKFW----------------------SEVEWSFLESLMLKICFHPNWVALIIGCVKTAK 246
           YQ+ W                        VEW +L+ ++ K+ F   W+  ++ CV   +
Sbjct: 427 YQRHWDFLQADICTAVRDFLQDMMKAYDRVEWKYLQGVLSKMGFADGWIQTVMKCVTKVR 486

BLAST of Lag0038494 vs. NCBI nr
Match: XP_039791742.1 (uncharacterized protein LOC120657488 isoform X3 [Panicum virgatum])

HSP 1 Score: 117.9 bits (294), Expect = 1.5e-22
Identity = 78/277 (28.16%), Postives = 125/277 (45.13%), Query Frame = 0

Query: 14  FRFEEVWAQQPECKHIIDGEGSWKVGSSGTPRLEYCLTNCRR---RLQRWGKGTIATIHR 73
           F++E +WA+ P+   I+  E  WK    G   L+   +N  R    L+ W   T  +I +
Sbjct: 247 FKYEAMWARAPDYNDIV--EKKWKEDFEGPRNLQSFWSNLSRMATSLKHWSSRTFGSIRK 306

Query: 74  DIHRLQASLQEL--YSRPPPWDFDAIKLTENQLDRVLEEDEIYWKQRSRENW-QSGATET 133
           +I +L+  L  L   S  P +  +  ++ E +L  + E +EI  +QRSR +W Q+G   T
Sbjct: 307 EIKKLERQLAMLRSSSATPAFSVEERRI-ERKLCDLFECEEIMARQRSRVDWLQAGDRNT 366

Query: 134 LDGEGNC----------------GYECKVINTFLRAKIERAIKQMHPSKAPGPDGFPSIF 193
                                  G  C+        +I  A+ QM P+KAPGPDGFP++F
Sbjct: 367 SFFHARASARRKTNRISYLLREDGTRCEDREELKDEEIREALFQMGPTKAPGPDGFPALF 426

Query: 194 YQKFW----------------------SEVEWSFLESLMLKICFHPNWVALIIGCVKTAK 246
           YQ+ W                        VEW +L+ ++ K+ F   W+  ++ CV   +
Sbjct: 427 YQRHWDFLQADICTAVRDFLQDMMKAYDRVEWKYLQGVLSKMGFADGWIQTVMKCVTKVR 486

BLAST of Lag0038494 vs. NCBI nr
Match: XP_039802490.1 (uncharacterized protein LOC120666657 [Panicum virgatum])

HSP 1 Score: 117.9 bits (294), Expect = 1.5e-22
Identity = 78/277 (28.16%), Postives = 125/277 (45.13%), Query Frame = 0

Query: 14  FRFEEVWAQQPECKHIIDGEGSWKVGSSGTPRLEYCLTNCRR---RLQRWGKGTIATIHR 73
           F++E +WA+ P+   I+  E  WK    G   L+   +N  R    L+ W   T  +I +
Sbjct: 247 FKYEAMWARAPDYNDIV--EKKWKEDFEGPRNLQSFWSNLSRMATSLKHWSSRTFGSIRK 306

Query: 74  DIHRLQASLQEL--YSRPPPWDFDAIKLTENQLDRVLEEDEIYWKQRSRENW-QSGATET 133
           +I +L+  L  L   S  P +  +  ++ E +L  + E +EI  +QRSR +W Q+G   T
Sbjct: 307 EIKKLERQLAMLRSSSATPAFSVEERRI-ERKLCDLFECEEIMARQRSRVDWLQAGDRNT 366

Query: 134 LDGEGNC----------------GYECKVINTFLRAKIERAIKQMHPSKAPGPDGFPSIF 193
                                  G  C+        +I  A+ QM P+KAPGPDGFP++F
Sbjct: 367 SFFHARASAKRKTNRISYLLREDGTRCEDREELKDEEIREALFQMGPTKAPGPDGFPALF 426

Query: 194 YQKFW----------------------SEVEWSFLESLMLKICFHPNWVALIIGCVKTAK 246
           YQ+ W                        VEW +L+ ++ K+ F   W+  ++ CV   +
Sbjct: 427 YQRHWDFLQADICTAVRDFLQDMMKAYDRVEWKYLQGVLSKMGFADGWIQTVMKCVTKVR 486

BLAST of Lag0038494 vs. ExPASy TrEMBL
Match: A0A2N9HXE3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44924 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 9.6e-28
Identity = 92/352 (26.14%), Postives = 147/352 (41.76%), Query Frame = 0

Query: 5   RPHNKGPKVFRFEEVWAQQPECKHIIDGEGSWKVGSSGTPRLEYC--LTNCRRRLQRWGK 64
           +PH+   K FRFEE+W     C+  I  + +W     GT   +    L NC++ L  W +
Sbjct: 556 QPHSL-RKPFRFEEIWTSDSGCESTI--QTAWDKRCDGTAMFQVWSKLKNCKKDLGNWSR 615

Query: 65  GTIATIHRDIHRLQASLQELYSRPPPWD-FDAIKLTENQLDRVLEEDEIYWKQRSRENWQ 124
            +   + R + + +  L+E  +     D    +K  +++++ +LE++E  W+QRSR +W 
Sbjct: 616 QSFGNVTRQLAQKRQQLKEAEADAIQGDGLGRMKSLKSEVNFLLEKEERIWRQRSRTSWL 675

Query: 125 SGATETLDGEGNCGYECKVINT----------------------------FLRAKIERAI 184
               +    E    Y   +  T                            F   ++E A+
Sbjct: 676 KDDKKEEVAEIFIDYYETIFQTSHPSLIEEAVAHVPQVVTSSMNESLTREFTAVEVEEAL 735

Query: 185 KQMHPSKAPGPDGFPSIFYQKFW------------------------------------- 244
           KQM P KAPGPDG P +FYQ+FW                                     
Sbjct: 736 KQMAPLKAPGPDGLPPLFYQRFWPVVGQDVTRGVLSCLNSDNVLVAFETLHHMHTTKMGR 795

Query: 245 --------------SEVEWSFLESLMLKICFHPNWVALIIGCVKTAKFSVLLNEVPSGHI 273
                           VEW++LES+M K+ FHP WV++I+ C+ T  +S+L+N  P G++
Sbjct: 796 DGAMALKLDMSKAYDRVEWAYLESIMRKMGFHPRWVSIIMQCISTVSYSLLVNGEPHGYL 855

BLAST of Lag0038494 vs. ExPASy TrEMBL
Match: A0A2N9FJZ7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15395 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 5.3e-26
Identity = 81/301 (26.91%), Postives = 133/301 (44.19%), Query Frame = 0

Query: 3   PRRPHNKGPKVFRFEEVWAQQPECKHIIDGEGSWKVGSSGTPRLEYC--LTNCRRRLQRW 62
           P+    +  + FRFEE+W Q   C+  I    +W   S GT   +    L +C+++L  W
Sbjct: 634 PKNSRRQRRRPFRFEEMWMQDSRCEKTI--MEAWSSNSPGTAMFQVSSKLRDCKQKLGSW 693

Query: 63  GKGTIATIHRDIHRLQASLQELYSRPPPWD-FDAIKLTENQLDRVLEEDEIYWKQRSREN 122
            + +   I++ I   +  L++  +     D  + +++   +L+ + E++E  W+QRSR  
Sbjct: 694 SRDSFGNINKKIEAAKLELKQAETCAIQGDSHENLQILRRRLNSLFEKEEKMWRQRSRSL 753

Query: 123 W-QSGATETLDGEGNCGYECK-------------------------VINTFLRAKIERAI 182
           W  +G   T          C+                         +I  F   ++E A+
Sbjct: 754 WLANGDRNTKYFHSRATQRCRTEPYPWIAEVVAQVPQVVTEDMNKALIREFTAPEVELAL 813

Query: 183 KQMHPSKAPGPDG----------FPSIFY------------------QKFWSEVEWSFLE 242
            QM P+KAPGPDG          F ++ Y                   K +  VEW FLE
Sbjct: 814 NQMAPTKAPGPDGRLITDNVLVAFETLHYMHHNRVGRDGAMALKLDMSKAYDRVEWHFLE 873

Query: 243 SLMLKICFHPNWVALIIGCVKTAKFSVLLNEVPSGHIVPQQGLRQAKP-KPFKRLHATLG 246
            +M+++ FH  W++LI  C+ T  +S+L+N  P G+I P +GLRQ  P  P+  L    G
Sbjct: 874 KIMIQLGFHHKWISLITECISTVSYSILVNGEPHGYIQPSRGLRQGDPLSPYLFLLCAEG 932

BLAST of Lag0038494 vs. ExPASy TrEMBL
Match: A0A2N9IXK4 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57484 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 4.5e-25
Identity = 75/290 (25.86%), Postives = 120/290 (41.38%), Query Frame = 0

Query: 12  KVFRFEEVWAQQPECKHIIDGEGSWKVGSSGTPRLEY--CLTNCRRRLQRWGKGTIATIH 71
           ++FRFEE+W   P CK  I    +W+    GT   +    L  CR  L++W + +   + 
Sbjct: 560 RIFRFEEMWLSHPGCKETI--TSAWQTQKHGTAMFQVHDKLRTCRNSLRQWSRDSFGNVT 619

Query: 72  RDIHRLQASLQELYSRPPPWDFDA-IKLTENQLDRVLEEDEIYWKQRSRENW-------- 131
            ++ +    L+E  S        A     + +++ +L  +E  W+QRSR+ W        
Sbjct: 620 SELKKKTQMLREAESESMKGKGHAKAHALKREVNTLLNREECMWRQRSRKKWLRWGDKNT 679

Query: 132 ------------QSGATETLDGEGNC---------------------------------- 191
                       ++  +E  D  GNC                                  
Sbjct: 680 SFFHHSATQRRRRNLISEIQDNHGNCYNSEEDIARTFEDHFVSLFSSSHPTEFDSVLSGV 739

Query: 192 ------GYECKVINTFLRAKIERAIKQMHPSKAPGPDGFPSIF-----YQKFWSEVEWSF 234
                     +++  F   +++ A+KQM PS APGPDG P          K +  VEW+F
Sbjct: 740 HRVVTDEMNAELVREFTAEEVDTALKQMAPSTAPGPDGRPGFMALKLDMSKAYDRVEWAF 799

BLAST of Lag0038494 vs. ExPASy TrEMBL
Match: A0A2N9F7C1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10641 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.9e-24
Identity = 82/329 (24.92%), Postives = 131/329 (39.82%), Query Frame = 0

Query: 12  KVFRFEEVWAQQPECKHIIDGEGSWKVGSSGTPRLEYCLTNCRRRLQRWGKGTIATIHRD 71
           K+FRFE++W   P+C+ ++      K   S   ++   +  C   L RW +     I + 
Sbjct: 645 KLFRFEDMWRMHPDCEPVVTQAWVPKTRGSPLAQVRTKIQRCGEELSRWSRAQFGNITKI 704

Query: 72  I-HRLQASLQELYSRPPPWDFDAIKLTENQLDRVLEEDEIYWKQRSRENW---------- 131
           +  + +   Q        +  D +     +++ +L ++E  W+QRSR +W          
Sbjct: 705 LKEKTELLRQAEVDSTLGYGHDTVISIRQEVNVLLLKEEKMWQQRSRVSWLKEGDRNTKY 764

Query: 132 ---------QSGATETL---DGEGNCGYEC------------------------------ 191
                    +  + +TL   DGE   G E                               
Sbjct: 765 FHNRASQRRRRNSIQTLIREDGEIVTGSEAIGTQFTDYYQALFTANPLEDVEVVLDGIQP 824

Query: 192 --------KVINTFLRAKIERAIKQMHPSKAPGPDGFPSIFYQKFW-------------- 246
                    +I+ F   ++  A+KQM P KAPGPDG P IFYQ +W              
Sbjct: 825 CVTQAMNQNLISQFTEEEVITAMKQMAPLKAPGPDGMPPIFYQSYWHVVGKDISSAVLYC 884

BLAST of Lag0038494 vs. ExPASy TrEMBL
Match: A0A2N9GPD6 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29161 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.9e-24
Identity = 82/329 (24.92%), Postives = 131/329 (39.82%), Query Frame = 0

Query: 12  KVFRFEEVWAQQPECKHIIDGEGSWKVGSSGTPRLEYCLTNCRRRLQRWGKGTIATIHRD 71
           K+FRFE++W   P+C+ ++      K   S   ++   +  C   L RW +     I + 
Sbjct: 612 KLFRFEDMWRMHPDCEPVVTQAWVPKTRGSPLAQVRTKIQRCGEELSRWSRAQFGNITKI 671

Query: 72  I-HRLQASLQELYSRPPPWDFDAIKLTENQLDRVLEEDEIYWKQRSRENW---------- 131
           +  + +   Q        +  D +     +++ +L ++E  W+QRSR +W          
Sbjct: 672 LKEKTELLRQAEVDSTLGYGHDTVISIRQEVNVLLLKEEKMWQQRSRVSWLKEGDRNTKY 731

Query: 132 ---------QSGATETL---DGEGNCGYEC------------------------------ 191
                    +  + +TL   DGE   G E                               
Sbjct: 732 FHNRASQRRRRNSIQTLIREDGEIVTGSEAIGTQFTDYYQALFTANPLEDVEVVLDGIQP 791

Query: 192 --------KVINTFLRAKIERAIKQMHPSKAPGPDGFPSIFYQKFW-------------- 246
                    +I+ F   ++  A+KQM P KAPGPDG P IFYQ +W              
Sbjct: 792 CVTQAMNQNLISQFTEEEVITAMKQMAPLKAPGPDGMPPIFYQSYWHVVGKDISSAVLYC 851

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022841874.12.4e-2523.67uncharacterized protein LOC111365549 [Olea europaea var. sylvestris][more]
XP_039791740.11.5e-2228.16uncharacterized protein LOC120657488 isoform X1 [Panicum virgatum][more]
XP_039791741.11.5e-2228.16uncharacterized protein LOC120657488 isoform X2 [Panicum virgatum][more]
XP_039791742.11.5e-2228.16uncharacterized protein LOC120657488 isoform X3 [Panicum virgatum][more]
XP_039802490.11.5e-2228.16uncharacterized protein LOC120666657 [Panicum virgatum][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9HXE39.6e-2826.14Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44924 PE=4 SV=1[more]
A0A2N9FJZ75.3e-2626.91Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15395 PE=4 SV=1[more]
A0A2N9IXK44.5e-2525.86RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57484 ... [more]
A0A2N9F7C12.9e-2424.92Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10641 PE=4 SV=1[more]
A0A2N9GPD62.9e-2424.92RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29161 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR19446:SF440SUBFAMILY NOT NAMEDcoord: 11..177
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 11..177
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 179..253
NoneNo IPR availablePANTHERPTHR19446:SF440SUBFAMILY NOT NAMEDcoord: 179..253

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0038494.1Lag0038494.1mRNA