Lag0038478 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0038478
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr2: 18437327 .. 18437907 (+)
RNA-Seq Expression	Lag0038478
Synteny	Lag0038478

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAAGAAAACAAACCTTCGAAAACCACCCTCACCAAGCTCGAAAGGACTCTGGCCAACCCCTACCACGCAAATTCGTCGTCTCAACCCATCGACTCCGCATGCAACATTGAGGAGACAAAGAAAACGGGCAAGAGGGGGAACAGTACTCAGAGCGGCGAGGGAATCGTAAGAAACGACTTCGACAACCCCTACCATGCAAATCCGAAGTCGTCTCCCCATGAAATCGCTCATGCAAAATCAAAGAGACGAAGGAAAACGGGCAAGAGGGGGAACCCTATTCAGAGCGGCGAGGGGATCTAGTAAAAGGGTTTCAGATCTGGCGGAAATTGCAGATCTGGTGGAAATTGCAGATCTGGAAACCAAGAGAGAAGAGATGCTGAGAAGAACAAACGACAAGAGAGAAGACGAGACATGGGAAGAACAAACGGTAAGAGAGAAGAAGAGTCATGGGAAGAACAAACGGTAAGAGAGAAGACGAAGCATGGGAAGAACAACCGGCGAGAGAGAATAAGAGGGACTGGAAGAAGAAACGGGAAGAAGACGAGGCACGAGAAGAAGAAAGGGCAAAAATCCTAG

mRNA sequence

ATGGGAAAGAAAACAAACCTTCGAAAACCACCCTCACCAAGCTCGAAAGGACTCTGGCCAACCCCTACCACGCAAATTCGTCGTCTCAACCCATCGACTCCGCATGCAACATTGAGGAGACAAAGAAAACGGGCAAGAGGGGGAACAGTACTCAGAGCGGCGAGGGAATCATCTGGTGGAAATTGCAGATCTGGAAACCAAGAGAGAAGAGATGCTGAGAAGAACAAACGACAAGAGAGAAGACGAGACATGGGAAGAACAAACGGTAAGAGAGAAGAAGAGTCATGGGAAGAACAAACGGTAAGAGAGAAGACGAAGCATGGGAAGAACAACCGGCGAGAGAGAATAAGAGGGACTGGAAGAAGAAACGGGAAGAAGACGAGGCACGAGAAGAAGAAAGGGCAAAAATCCTAG

Coding sequence (CDS)

ATGGGAAAGAAAACAAACCTTCGAAAACCACCCTCACCAAGCTCGAAAGGACTCTGGCCAACCCCTACCACGCAAATTCGTCGTCTCAACCCATCGACTCCGCATGCAACATTGAGGAGACAAAGAAAACGGGCAAGAGGGGGAACAGTACTCAGAGCGGCGAGGGAATCATCTGGTGGAAATTGCAGATCTGGAAACCAAGAGAGAAGAGATGCTGAGAAGAACAAACGACAAGAGAGAAGACGAGACATGGGAAGAACAAACGGTAAGAGAGAAGAAGAGTCATGGGAAGAACAAACGGTAAGAGAGAAGACGAAGCATGGGAAGAACAACCGGCGAGAGAGAATAAGAGGGACTGGAAGAAGAAACGGGAAGAAGACGAGGCACGAGAAGAAGAAAGGGCAAAAATCCTAG

Protein sequence

MGKKTNLRKPPSPSSKGLWPTPTTQIRRLNPSTPHATLRRQRKRARGGTVLRAARESSGGNCRSGNQERRDAEKNKRQERRRDMGRTNGKREEESWEEQTVREKTKHGKNNRRERIRGTGRRNGKKTRHEKKKGQKS

Homology

The following BLAST results are available for this feature:

BLAST of Lag0038478 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0038478 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 62..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..36

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0038478.1	Lag0038478.1	mRNA