Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGGCGGAGTCCTGGTTTGGCATCACCGAGGCAAAGTTTCTGTAGTTTTTTTGCAGTTCCTGTCAATTTCTTTCATGGCATTTGAAAATATGATGGAAAATTGGGAGAGATTCAGTCTCACCATTGAAGAGGACTCCACTGAAGTTGATGTGGATCGTCAGGCGACACTGATTACTAGTCAATCTTTAGGCCTCATAGGCAAATTGCTTGCCCCTCGGATCATCTCGGGGGAGGTGATGCGACGTACTTTCAAGTCGGCGTGGAACATCCCCAATGGCCTTATGGTGGGAAAATGGGATCAAATCTGTTTCTATTTACTTCAGTCGGAAGCTGACCAATCTCGGGTGCTGTGTCAGGAGCCTTGGCTCTTTGACAAGTTCTTGCTCGTCCTTTCGAAACCTATCCCGATGGTGAAGCCTACTGCCATGGTTTTCCAATTTGCAACCTTTTGGGTGCATTTTTGTGATCTTCTAATGGACCTCTATAATCGGTCAATGGCGAAGAGATTGGGTAACGCGATTGGCCAGTTTCAAGAGTATGACAACGGGGGTCGAGGATATGGCTGGAAGGAGAGTCTTAGAGTTCGAGTCATCTTTACAGATATCACGTGCCCTTTTCGTCGAGGTATTAAGGTTCGACTCGATGATTCATTGGGAAGTGTTTGGTCTCCTATTAAGTATGAAAGGCTGCCGAAAATATGCTCGTATTGTGGCCGGATAAGACATGGGACGAGGGATTGCTCTTTCTCGTTGGTTGATGATGGTTCATCATCACACCGGCAAGAGTACATGATGTGGATGTCATTTTCTAGGCGTTCTTCACATGTTTTCCGTTCAGTAACCAATAGTTCTATGGGTTCTAATAGGATCATGCCGGAGGTTTCACCAAATCCGATTGGCAATCTGGTGAGGAGTCAAGAAAAAACGGCGGGACAGGAAGTGGGTCTGGATCATTAG
mRNA sequence
ATGTGTGGCGGAGTCCTGGTTTGGCATCACCGAGGCAAAGTTTCTGTAGTTTTTTTGCAGTTCCTGTCAATTTCTTTCATGGCATTTGAAAATATGATGGAAAATTGGGAGAGATTCAGTCTCACCATTGAAGAGGACTCCACTGAAGTTGATGTGGATCGTCAGGCGACACTGATTACTAGTCAATCTTTAGGCCTCATAGGCAAATTGCTTGCCCCTCGGATCATCTCGGGGGAGGTGATGCGACGTACTTTCAAGTCGGCGTGGAACATCCCCAATGGCCTTATGGTGGGAAAATGGGATCAAATCTGTTTCTATTTACTTCAGTCGGAAGCTGACCAATCTCGGGTGCTGTGTCAGGAGCCTTGGCTCTTTGACAAGTTCTTGCTCGTCCTTTCGAAACCTATCCCGATGGTGAAGCCTACTGCCATGGTTTTCCAATTTGCAACCTTTTGGGTGCATTTTTGTGATCTTCTAATGGACCTCTATAATCGGTCAATGGCGAAGAGATTGGGTAACGCGATTGGCCAGTTTCAAGAGTATGACAACGGGGGTCGAGGATATGGCTGGAAGGAGAGTCTTAGAGTTCGAGTCATCTTTACAGATATCACGTGCCCTTTTCGTCGAGGTATTAAGGTTCGACTCGATGATTCATTGGGAAGTGTTTGGTCTCCTATTAAGTATGAAAGGCTGCCGAAAATATGCTCGTATTGTGGCCGGATAAGACATGGGACGAGGGATTGCTCTTTCTCGTTGGTTGATGATGGTTCATCATCACACCGGCAAGAGTACATGATGTGGATGTCATTTTCTAGGCGTTCTTCACATGTTTTCCGTTCAGTAACCAATAGTTCTATGGGTTCTAATAGGATCATGCCGGAGGTTTCACCAAATCCGATTGGCAATCTGGTGAGGAGTCAAGAAAAAACGGCGGGACAGGAAGTGGGTCTGGATCATTAG
Coding sequence (CDS)
ATGTGTGGCGGAGTCCTGGTTTGGCATCACCGAGGCAAAGTTTCTGTAGTTTTTTTGCAGTTCCTGTCAATTTCTTTCATGGCATTTGAAAATATGATGGAAAATTGGGAGAGATTCAGTCTCACCATTGAAGAGGACTCCACTGAAGTTGATGTGGATCGTCAGGCGACACTGATTACTAGTCAATCTTTAGGCCTCATAGGCAAATTGCTTGCCCCTCGGATCATCTCGGGGGAGGTGATGCGACGTACTTTCAAGTCGGCGTGGAACATCCCCAATGGCCTTATGGTGGGAAAATGGGATCAAATCTGTTTCTATTTACTTCAGTCGGAAGCTGACCAATCTCGGGTGCTGTGTCAGGAGCCTTGGCTCTTTGACAAGTTCTTGCTCGTCCTTTCGAAACCTATCCCGATGGTGAAGCCTACTGCCATGGTTTTCCAATTTGCAACCTTTTGGGTGCATTTTTGTGATCTTCTAATGGACCTCTATAATCGGTCAATGGCGAAGAGATTGGGTAACGCGATTGGCCAGTTTCAAGAGTATGACAACGGGGGTCGAGGATATGGCTGGAAGGAGAGTCTTAGAGTTCGAGTCATCTTTACAGATATCACGTGCCCTTTTCGTCGAGGTATTAAGGTTCGACTCGATGATTCATTGGGAAGTGTTTGGTCTCCTATTAAGTATGAAAGGCTGCCGAAAATATGCTCGTATTGTGGCCGGATAAGACATGGGACGAGGGATTGCTCTTTCTCGTTGGTTGATGATGGTTCATCATCACACCGGCAAGAGTACATGATGTGGATGTCATTTTCTAGGCGTTCTTCACATGTTTTCCGTTCAGTAACCAATAGTTCTATGGGTTCTAATAGGATCATGCCGGAGGTTTCACCAAATCCGATTGGCAATCTGGTGAGGAGTCAAGAAAAAACGGCGGGACAGGAAGTGGGTCTGGATCATTAG
Protein sequence
MCGGVLVWHHRGKVSVVFLQFLSISFMAFENMMENWERFSLTIEEDSTEVDVDRQATLITSQSLGLIGKLLAPRIISGEVMRRTFKSAWNIPNGLMVGKWDQICFYLLQSEADQSRVLCQEPWLFDKFLLVLSKPIPMVKPTAMVFQFATFWVHFCDLLMDLYNRSMAKRLGNAIGQFQEYDNGGRGYGWKESLRVRVIFTDITCPFRRGIKVRLDDSLGSVWSPIKYERLPKICSYCGRIRHGTRDCSFSLVDDGSSSHRQEYMMWMSFSRRSSHVFRSVTNSSMGSNRIMPEVSPNPIGNLVRSQEKTAGQEVGLDH
Homology
BLAST of Lag0038461 vs. NCBI nr
Match:
XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])
HSP 1 Score: 198.7 bits (504), Expect = 7.3e-47
Identity = 105/248 (42.34%), Postives = 139/248 (56.05%), Query Frame = 0
Query: 27 MAFENMMENWERFSLTIEEDSTEVDVDRQATLITSQSL--GLIGKLLAPRIISGEVMRRT 86
M EN++ +W++F LT EED +DVD A + Q L L+GKLLA RIIS +V+ R
Sbjct: 1 MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60
Query: 87 FKSAWNIPNGLMVGKWDQICF-YLLQSEADQSRVLCQEPWLFDKFLLVLSKPIPMVKPTA 146
AW + + L V + F + E D +RV+ PW FDK L+VL KP +
Sbjct: 61 LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120
Query: 147 MVFQFATFWVHFCDLLMDLYNRSMAKRLGNAIGQFQEYDNGGRGYGWKESLRVRVIFTDI 206
+ F FW+H DL M N++MA RLGNAIG F + D +G+ W SLR+RV+ DI
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLI-DI 180
Query: 207 TCPFRRGIKVRLDDSLGSVWSPIKYERLPKICSYCGRIRHGTRDCSFS-LVDDGSSSHRQ 266
T P RRGIK+ +D +G W PI+YERLP C +CG I H + DC L S
Sbjct: 181 TKPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATS 240
Query: 267 EYMMWMSF 271
EY W+ F
Sbjct: 241 EYGPWLRF 247
BLAST of Lag0038461 vs. NCBI nr
Match:
XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])
HSP 1 Score: 183.7 bits (465), Expect = 2.4e-42
Identity = 102/259 (39.38%), Postives = 147/259 (56.76%), Query Frame = 0
Query: 27 MAFENMMENWERFSLTIEEDSTEVDVDRQATLITSQ--SLGLIGKLLAPRIISGEVMRRT 86
MA N++E W+ F LT EED VD+D A T + L LI KLL+ R IS V++ T
Sbjct: 1 MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60
Query: 87 FKSAWNIP----NGLMVGKWDQICFYLLQSEADQSRVLCQEPWLFDKFLLVLSKPIPMVK 146
K AW + + ++G I + +D++R+L PW FD+ L+++ P+ + K
Sbjct: 61 LKIAWKLDCKAFSVDIIG--FNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTK 120
Query: 147 PTAMVFQFATFWVHFCDLLMDLYNRSMAKRLGNAIGQFQEYDNGGRGYGWKESLRVRVIF 206
P M F+ + WVHF DL + N++MA RLGNAIG F++ ++ + W LRVRV F
Sbjct: 121 PLDMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRF 180
Query: 207 TDITCPFRRGIKVRLDDSLGSVWSPIKYERLPKICSYCGRIRHGTRDCSFSLVDDGSSSH 266
D+ P RGIK+ LD +G W PI+YERLP +CGR+ H +DCS VD S S
Sbjct: 181 -DVMKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVD--SVSK 240
Query: 267 RQEYMMWMSFS--RRSSHV 278
+Y W+ F + SS++
Sbjct: 241 NLQYGPWLRFQGHKNSSNI 254
BLAST of Lag0038461 vs. NCBI nr
Match:
XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])
HSP 1 Score: 162.5 bits (410), Expect = 5.8e-36
Identity = 83/217 (38.25%), Postives = 122/217 (56.22%), Query Frame = 0
Query: 27 MAFENMMENWERFSLTIEEDSTEVDVDRQATLITSQSLG--LIGKLLAPRIISGEVMRRT 86
MA +++E W+ F LT EE+ T +DVD A T L L+GKL R I+ VM+ T
Sbjct: 1 MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60
Query: 87 FKSAWNIPNGL--MVGKWDQICFYLLQSEADQSRVLCQEPWLFDKFLLVLSKPIPMVKPT 146
++AW + N + + + D++++ PW FD+ L++++KP+ ++ P+
Sbjct: 61 MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120
Query: 147 AMVFQFATFWVHFCDLLMDLYNRSMAKRLGNAIGQFQEYDNGGRGYGWKESLRVRVIFTD 206
+ F WV F DL + R MA RLGNA+G F+E D W +LRVRV+ D
Sbjct: 121 ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVML-D 180
Query: 207 ITCPFRRGIKVRLDDSLGSVWSPIKYERLPKICSYCG 240
I+ P RRGIK+ LD +G W PI+YERLP C +CG
Sbjct: 181 ISKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCG 216
BLAST of Lag0038461 vs. NCBI nr
Match:
XP_028124075.1 (uncharacterized protein LOC114321128 [Camellia sinensis])
HSP 1 Score: 151.4 bits (381), Expect = 1.3e-32
Identity = 89/272 (32.72%), Postives = 138/272 (50.74%), Query Frame = 0
Query: 30 ENMMENWERFSLTIEEDS-TEVDVDRQATLITSQSLGLIGKLLAPRIISGEVMRRTFKSA 89
+++++ SLT EED+ + D + ++ + L+GKLL R + E M+ T S
Sbjct: 3 DSLVDLTRTLSLTSEEDAVVRIGGDSTSLMMGKSDMCLVGKLLTRRPFNVEAMKNTLLSV 62
Query: 90 WNIPNGLMVGK-WDQICFYLLQSEADQSRVLCQEPWLFDKFLLVLSKPIPMVKPTAMVFQ 149
W G+ V D + ++ D+ RVL PW FDK LL+L + P V+P+ +
Sbjct: 63 WQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSNGPWTFDKHLLMLGEMDPNVQPSDIQLT 122
Query: 150 FATFWVHFCDLLMDLYNRSMAKRLGNAIGQFQEYDNGGRGYGWKESLRVRVIFTDITCPF 209
FWVH C+L + L N+ + + +GNA+GQF + D G W ++R+RV D+ P
Sbjct: 123 GVQFWVHVCNLPLVLMNKQVGQIVGNAVGQFIDMDYEDGGIAWGRTMRIRVAI-DVRKPL 182
Query: 210 RRGIKVRLDDSLGSVWSPIKYERLPKICSYCGRIRHGTRDCSFSL-VDDGSSSHRQEYMM 269
RRG+K+ L S +W KYERLP C +CGR+ H R+C L DG+ +Y
Sbjct: 183 RRGMKLAL-SSADPIWVDFKYERLPIYCYFCGRLGHSDRECDDKLSFADGTRVDSLQYGA 242
Query: 270 WMSF-------SRRSSHVFRSVTNSSMGSNRI 292
W+ SRR+ + + V + G I
Sbjct: 243 WLRMDNIKSKGSRRAGSIDKGVGGTHPGGQGI 272
BLAST of Lag0038461 vs. NCBI nr
Match:
XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])
HSP 1 Score: 150.2 bits (378), Expect = 3.0e-32
Identity = 89/272 (32.72%), Postives = 138/272 (50.74%), Query Frame = 0
Query: 30 ENMMENWERFSLTIEEDS-TEVDVDRQATLITSQSLGLIGKLLAPRIISGEVMRRTFKSA 89
+++++ SLT EED+ + + + ++ + L+GKLL R + E M+ T S
Sbjct: 3 DSLLDLTRTLSLTSEEDAVVRIGGESTSLMMGKSDMCLVGKLLTRRPFNVEAMKNTLLSV 62
Query: 90 WNIPNGLMVGK-WDQICFYLLQSEADQSRVLCQEPWLFDKFLLVLSKPIPMVKPTAMVFQ 149
W G+ V D + ++ D+ RVL PW FDK LL+L + P V+P+ +
Sbjct: 63 WQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSDGPWTFDKHLLMLGEMDPNVQPSDIQLT 122
Query: 150 FATFWVHFCDLLMDLYNRSMAKRLGNAIGQFQEYDNGGRGYGWKESLRVRVIFTDITCPF 209
FWVH C+L + L N+ + + +GNA+GQF + D G W ++R+RV D+ P
Sbjct: 123 RVQFWVHVCNLPLVLMNKKVGEIVGNAVGQFIDMDYEDGGIVWGRTMRIRVAL-DVRKPL 182
Query: 210 RRGIKVRLDDSLGSVWSPIKYERLPKICSYCGRIRHGTRDCSFSLVD-DGSSSHRQEYMM 269
RRG+K+ L S +W KYERLP C +CGR+ H R+C L DGS +Y
Sbjct: 183 RRGMKLAL-SSAEPIWVDFKYERLPIYCYFCGRLGHSERECDDKLSSADGSRVDSLQYGA 242
Query: 270 WMSF-------SRRSSHVFRSVTNSSMGSNRI 292
W+ SRR+ + + V + G I
Sbjct: 243 WLRMDNIKSKGSRRAGSIDKGVGGTHPGGQGI 272
BLAST of Lag0038461 vs. ExPASy TrEMBL
Match:
A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)
HSP 1 Score: 198.7 bits (504), Expect = 3.6e-47
Identity = 105/248 (42.34%), Postives = 139/248 (56.05%), Query Frame = 0
Query: 27 MAFENMMENWERFSLTIEEDSTEVDVDRQATLITSQSL--GLIGKLLAPRIISGEVMRRT 86
M EN++ +W++F LT EED +DVD A + Q L L+GKLLA RIIS +V+ R
Sbjct: 1 MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60
Query: 87 FKSAWNIPNGLMVGKWDQICF-YLLQSEADQSRVLCQEPWLFDKFLLVLSKPIPMVKPTA 146
AW + + L V + F + E D +RV+ PW FDK L+VL KP +
Sbjct: 61 LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120
Query: 147 MVFQFATFWVHFCDLLMDLYNRSMAKRLGNAIGQFQEYDNGGRGYGWKESLRVRVIFTDI 206
+ F FW+H DL M N++MA RLGNAIG F + D +G+ W SLR+RV+ DI
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLI-DI 180
Query: 207 TCPFRRGIKVRLDDSLGSVWSPIKYERLPKICSYCGRIRHGTRDCSFS-LVDDGSSSHRQ 266
T P RRGIK+ +D +G W PI+YERLP C +CG I H + DC L S
Sbjct: 181 TKPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATS 240
Query: 267 EYMMWMSF 271
EY W+ F
Sbjct: 241 EYGPWLRF 247
BLAST of Lag0038461 vs. ExPASy TrEMBL
Match:
A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)
HSP 1 Score: 183.7 bits (465), Expect = 1.2e-42
Identity = 102/259 (39.38%), Postives = 147/259 (56.76%), Query Frame = 0
Query: 27 MAFENMMENWERFSLTIEEDSTEVDVDRQATLITSQ--SLGLIGKLLAPRIISGEVMRRT 86
MA N++E W+ F LT EED VD+D A T + L LI KLL+ R IS V++ T
Sbjct: 1 MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60
Query: 87 FKSAWNIP----NGLMVGKWDQICFYLLQSEADQSRVLCQEPWLFDKFLLVLSKPIPMVK 146
K AW + + ++G I + +D++R+L PW FD+ L+++ P+ + K
Sbjct: 61 LKIAWKLDCKAFSVDIIG--FNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTK 120
Query: 147 PTAMVFQFATFWVHFCDLLMDLYNRSMAKRLGNAIGQFQEYDNGGRGYGWKESLRVRVIF 206
P M F+ + WVHF DL + N++MA RLGNAIG F++ ++ + W LRVRV F
Sbjct: 121 PLDMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRF 180
Query: 207 TDITCPFRRGIKVRLDDSLGSVWSPIKYERLPKICSYCGRIRHGTRDCSFSLVDDGSSSH 266
D+ P RGIK+ LD +G W PI+YERLP +CGR+ H +DCS VD S S
Sbjct: 181 -DVMKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVD--SVSK 240
Query: 267 RQEYMMWMSFS--RRSSHV 278
+Y W+ F + SS++
Sbjct: 241 NLQYGPWLRFQGHKNSSNI 254
BLAST of Lag0038461 vs. ExPASy TrEMBL
Match:
A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)
HSP 1 Score: 162.5 bits (410), Expect = 2.8e-36
Identity = 83/217 (38.25%), Postives = 122/217 (56.22%), Query Frame = 0
Query: 27 MAFENMMENWERFSLTIEEDSTEVDVDRQATLITSQSLG--LIGKLLAPRIISGEVMRRT 86
MA +++E W+ F LT EE+ T +DVD A T L L+GKL R I+ VM+ T
Sbjct: 1 MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60
Query: 87 FKSAWNIPNGL--MVGKWDQICFYLLQSEADQSRVLCQEPWLFDKFLLVLSKPIPMVKPT 146
++AW + N + + + D++++ PW FD+ L++++KP+ ++ P+
Sbjct: 61 MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120
Query: 147 AMVFQFATFWVHFCDLLMDLYNRSMAKRLGNAIGQFQEYDNGGRGYGWKESLRVRVIFTD 206
+ F WV F DL + R MA RLGNA+G F+E D W +LRVRV+ D
Sbjct: 121 ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVML-D 180
Query: 207 ITCPFRRGIKVRLDDSLGSVWSPIKYERLPKICSYCG 240
I+ P RRGIK+ LD +G W PI+YERLP C +CG
Sbjct: 181 ISKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCG 216
BLAST of Lag0038461 vs. ExPASy TrEMBL
Match:
A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 8.2e-28
Identity = 77/223 (34.53%), Postives = 118/223 (52.91%), Query Frame = 0
Query: 30 ENMMENWERFSLTIEEDSTEVDVDRQATLITSQSLGL--IGKLLAPRIISGEVMRRTFKS 89
+ + + WE F T +E+ T V +DR ++T+ ++ L + KL + IS E +R KS
Sbjct: 2 DEITDLWEHFKSTNDENET-VTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKS 61
Query: 90 AWNIPNGLMVGKWD-QICFYLLQSEADQSRVLCQEPWLFDKFLLVLSKPIPMVKPTAMVF 149
W + N I L +S +++SRVL PW F+K LLVL+ P +P M F
Sbjct: 62 VWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNF 121
Query: 150 QFATFWVHFCDLLMDLYNRSMAKRLGNAIGQFQEYDNGGRGYGWK-ESLRVRVIFTDITC 209
F FW+ ++ + + MA LG +G +E + G GW +RVRV D++
Sbjct: 122 NFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGAD-GWAGPFIRVRVKI-DVSK 181
Query: 210 PFRRGIKVRLDDSLGSVWSPIKYERLPKICSYCGRIRHGTRDC 249
P RRGIK++ D +W P++YE+LP C CG+I H R+C
Sbjct: 182 PLRRGIKLKNSDG-KDIWCPLRYEKLPDFCYECGKIGHSGREC 220
BLAST of Lag0038461 vs. ExPASy TrEMBL
Match:
A0A2N9EV43 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6587 PE=4 SV=1)
HSP 1 Score: 132.1 bits (331), Expect = 4.1e-27
Identity = 83/241 (34.44%), Postives = 114/241 (47.30%), Query Frame = 0
Query: 30 ENMMENWERFSLTIEEDSTEVDVDRQATLITSQSLGLIGKLLAPRIISGEVMRRTFKSAW 89
E + W+ SLT +E S V +A L L PR+I+ E + R K W
Sbjct: 2 EEITGRWQDLSLTEKEGSLIVLTPEEA----DDGSMLAAWFLTPRMINMESVLRALKPLW 61
Query: 90 NIPNGLMV-GKWDQICFYLLQSEADQSRVLCQEPWLFDKFLLVLSKPIPMVKPTAMVFQF 149
G + ++ Q+EAD RVL PW FDK L++LS+ V + F F
Sbjct: 62 RPGTGFKARDMGNNKAMFVFQNEADAERVLINGPWSFDKHLIILSRLDDTVPFSKACFDF 121
Query: 150 ATFWVHFCDLLMDLYNRSMAKRLGNAIGQFQEYDNGGRGYGWKESLRVRVIFTDITCPFR 209
+FWV DL + + + R+G+ +G + ++ G G+ +RVRV DI P
Sbjct: 122 MSFWVQIHDLPVKMMKPAACARIGSTLGTLEHVEDVGEGHSKGSFMRVRVAI-DIRQPLC 181
Query: 210 RGIKVRLDDSLGSVWSPIKYERLPKICSYCGRIRHGTRDCSFSLVDDGS-SSHRQEYMMW 269
RG KV L G W +YERL C +CGRI HG +DC L GS SS +Q Y W
Sbjct: 182 RGRKVGLGGK-GECWVSFRYERLTNFCYWCGRITHGEKDCEIWLRSRGSLSSDQQPYGAW 236
BLAST of Lag0038461 vs. TAIR 10
Match:
AT2G13450.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02000.1); Has 247 Blast hits to 243 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 243; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 59.3 bits (142), Expect = 6.5e-09
Identity = 65/275 (23.64%), Postives = 110/275 (40.00%), Query Frame = 0
Query: 30 ENMMENWERFSLTIEEDSTEVDVDRQATLITSQSLGLIGKLLAPRIISGEVMRRTFKSAW 89
+ + + + L E+ + + + A + + L LI + L PR + + AW
Sbjct: 3 DELWDELQHLELGREDPALFIPHEAYAIVESRNRLSLIARPLNPRSQNLHAVISALPRAW 62
Query: 90 NIPN---GLMVGKWDQICFYLLQSEADQSRVLCQEPWLFDKFLLVLSKPIPMVKPTAMVF 149
+ N G ++ D ++ QSE D VL +EPWL++ + + + V T +
Sbjct: 63 GLTNRVHGRVLN--DTFVQFIFQSEIDLLSVLRREPWLYNNWFVTAQR--WEVNLTFHLL 122
Query: 150 QFATFWVHFCDLLMDLYNRSMAKRLGNAIGQFQEYDNGGRGYGWKESLRVRVIFTDITCP 209
WV + + A + + +G+ D +RVR+ F IT
Sbjct: 123 TSIELWVQMRGIPLLYVCEETALEIAHELGEIITLDFHDSTTTQIAYIRVRIRF-GITDR 182
Query: 210 FRRGIKVRLDDSLGSVWSPIKYERLPKICSYCGRIRHGTRDCSFSLVDDGSSSHRQEYMM 269
R +++ D ++ S +YERL +ICS C R+ H C + ++ S HR
Sbjct: 183 LRFFLRIIFDSGETALIS-FQYERLRRICSSCFRMTHHRNSCLYRQIE---SLHRVTNTT 242
Query: 270 WMSFSRRSSHVFRSVTNSSMGSNRIMPEVS-PNPI 301
R + SSM S M E S P PI
Sbjct: 243 AQRNVREEVFMRDENLRSSMNSQSQMSESSFPTPI 268
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022156185.1 | 7.3e-47 | 42.34 | uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... | [more] |
XP_022132681.1 | 2.4e-42 | 39.38 | uncharacterized protein LOC111005481 [Momordica charantia] | [more] |
XP_022158377.1 | 5.8e-36 | 38.25 | uncharacterized protein LOC111024874 [Momordica charantia] | [more] |
XP_028124075.1 | 1.3e-32 | 32.72 | uncharacterized protein LOC114321128 [Camellia sinensis] | [more] |
XP_028122006.1 | 3.0e-32 | 32.72 | uncharacterized protein LOC114319195 [Camellia sinensis] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DU55 | 3.6e-47 | 42.34 | uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1BSZ1 | 1.2e-42 | 39.38 | uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
A0A6J1DX30 | 2.8e-36 | 38.25 | uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A6J1D765 | 8.2e-28 | 34.53 | uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
A0A2N9EV43 | 4.1e-27 | 34.44 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
Match Name | E-value | Identity | Description | |
AT2G13450.1 | 6.5e-09 | 23.64 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |