Lag0038443 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0038443
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Ribonuclease H
Location	chr2: 17604098 .. 17613871 (-)
RNA-Seq Expression	Lag0038443
Synteny	Lag0038443

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCAATCTACTGAGTATGGGAGAGGTGACGCAAACTTGGACGCTCTTTGTAGATGGGTCCTCCAATACCAAGGGCTGCAGAGCAGGAATTTTACTGGAATCCCCAGATGGAGGAAGATTCGAGTACGCCTTGAGGTTTAATTTCAAGGCCTTGAATAATGAGGCTGAGTACGAGGCACTCCTTACAGGATTGAAGTTGGCCAGGGAGATCGGAGTATCAGACCTCCTGGTTCAGAGCGATTCACAACTAATTGTAAAGCAAGTGATGGCGGAGTATCAAACTAGGGAACAGAGAATGAGTAAATACTTATCCAAGGCTAGAGAAGTGCTGTCCAAATTTGAGAAGTGGGAGATCAAACAAATCCCAAGGTCTCAGAACGCCAACGCAGATTCACTAGTCCGCTTGGCGGCTGCCTACGATACAGAGTCGAGTAGGATTGTACCAGTTGAGGTTTTGTCTGAGCCAACTGTATGTACTAAGGAGGTTCTTGAGACAAATGGCCGAGCAGAGGCCGAGGCCGAGGATCTTGCAGATGGGGAGGGCACCCCATCAATTGAAACCGAGCCCTCCACTAAAGTAAGAGAAGTTTCATGGATGGATCCGATACTTGATTATTTAGGAAAAGGTGAATTGCCAGCAGAGAAGATAAGGCTAAAAATGTGCAAAAGCGAGCATCACATTTTGTGTTAAGGGAAGGGAAGCTATATAAGAGAGAATACTCAATGTCGTTGCTTAAATGCCTTCCCCCAGGTGATGCTAACTATGTTATGACAGAGATACATGAGGGGGTGTGTGGCAATCATTCAAGAGGGAGGTCACTGTGTCACAAGATCGTCACGCAAGGTTACTACTGGCCAACGATGTTGCAAGACGCTAAATATTTCATGAGATCTTGCGACCAGTGCCAAAGGTTTGCGCCTATTCCAAGGCAACCACCTGATAAGGGTAAAAAATATGCCTATATTTAGCTCATTTCTTGGTCAAATATTGAGTGTTTAGGTCAATTTTACTATTTCCGAGCTCAAAATATGTTAATTTGATAAGTTAGGGTGTTGAGAGTCACTTTTGTTGAATTATGCTTATTTGTGCTTAAAAAGACTTGATTTTAAGAAAATTTGACTTAGTTTGCAGTTGTGCAGAAAAATAGAGGAAAAGTTGGAATTCCCCAGAAATGTGACTGCATTTCTGGGAAGGCAAAATTGAAATGCAACCGCATTTCTGGAAAATAAGAGGTCGTTCCGAGTCGCACGTGGGTCGTTGTTGACGAGTCTTCTTCGCACCTAACCGGTTGTTTTGACCTCGAAACTGACTAGGCAACCTTCCAGCACCTATTTCGCAGCTCCTCAACCAATTTCTACACTATATAAGCTCGGGATTCGAAGTCAAATGCAAACATAACTCACTTGGAAGAAAAGGGTGGTGACAGAACCTTGGCTCGACGCCAATGAGTAGGGATGCCTGAGGTCCTTCTTAGATGACCAAGTTCTAACCCGAGAGAGAGTTAGACATCAAACCTTGTGGTTTGTAGAGAGTTTCACTCATTCCCATCTTGTAAAAGTGAGAGAGTGGAGTGTCTTAGCGAACTCTAGAAGGATTGTGTAAACAAAAAACCCATAATATATTAGCTATCTCCTTTATTTCCAACTCTTGAATCTTTTCATTATTTTGTATTCTTTACGTCATTATTTCAATGAAAATGTGTTCATTTGCTTTTTATCCCATCATGAGTAGCTAAATCCCATTGAGGGGTTCAATGTGGTGAATTCCCTTAGGGTTTAATGGCTTGAAAGTGTTTTATTTGCTTAAGCAGGGTTTAATGCATGTCATTCTTTATTGATTATCACTCCAATCTTGTTGAGTTTAATTTGATCACTTAGACTTTGCATGCTATGTGAGTTTGATCTCGAAAGGGACAAATGATATCGGTTCTCATAAAGGTGATATAGGAGAAAAAGCTCGAAAGAGATTGTTCGACAATATAGGGCGCTGCCTAAGGCACCCTATATCGACTATAAGGTTATAGGTTGCCTTCGTGAATTATCTATGTTGGAGTCGAGTCACATAAATGTGCATAACGGTACTTGCTTAGTTTTTTAACGGTTTTTGGAAACAAGGGCCAAATGGAAGTTAAATTGACCCAATGCAGTAAATACTCCTAAGTTAGATATTGCATAAGTATGGTTGTTACCTTAGAGATGAATCCATGTTGAATACCTCGTTTCTTTATTATTGTTATTCTTTATTATTTTATTACTTGTTTTATTTATTTTTCAAAACCCAATCAATCAACTTATTTCCTTTGGTTACCTTTTTCAAAAGCAATCCAAGACATATCTTGGTCTTCAAATATTTTCCTTTTTGACATTTACAGTTGATCTAATCAAAAGTATAAATCTAATACCAACAAATATGCCTAAATAATCAATTTTGTAAATTAAAACAATATCACATATATGAAATTAAAATACCCACCATTGAACCAATGCTAATTTTAGAGAAACGAAATTAAATCTACGATCGGCTCTGATACCAATTGAAGGATTGGAATTCCCAATTCCGTTACAGCGGAAGCAATTGGACCGTTCGTAAATTAATTTTGTTCTACAAAATACCAATACATTGGCAAAAAGTTAAGCGGAGAAAAACATACCTCCGTTGACGACTCTGAATACTTCAACGGACACCACCATGAGGCTACCCTGCGTCGTTGTCGTCTCTGAAATATAAAGAACTCCTTTCTTGATTTTGGACCAAGCATCAACAATTGGCACACCACCAATTGATCTTCCCCGTTATAACTCTGAGATTAGGAGCGTAGTTGTGAGACTACCTAATCTTGAATGGGAAAAACTCTAGAGAGAAACTTATCCCTAGAGTTCTTGGGTTGAGAGAATATGAGAGGGAGGCTAGAGAGAATGCAAGAATGCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCTTGAGAAATTCTCCCATCTGAAGTCTTGGAGGCGGACATTCAATATGCGAATTTTCTGTGAGTTTTCTTCTTCTTCGATTGTACTAATTAATTTTGTTAATTCCCTATTTCAATCGCAATGATCAACATCTTGGTTTTCAAGTTGAGGGGAAAATTAAGTTATGTCTCTGCGTGGAAGAAGGGTAGTTTGGATTTTCCCAAAATAGAAAGAAACTGCGTTTTGGAAGGGGATACAAATGCAAGCTATTGTCTGTTTAGGTTTTGATGATGCCTTTTTTAAATGTATGATTCTTTTTGTTAGATTTTTGGCTTTCTAGGGCAGCTGCAATCCCCATGGCAAAATGGGTACCTATATTCAAATGAATTTGGTTTACAATCACTTGGCTTCGATTGTTCTTGGTTTTATATCTATGTGTTATATTATTGAAGAATATTTTCTTATTTTAATCTTTATTAATTATTTACCTCGGGAAGAACTACAAATCAAGTTATTAATCATATTCAAGTTTTTGACTTAACTTGTCCTATATGATCTTGTTATTGAAGAATATTTTCTTATTTTAATCTTTATGGGCTATTTTTATTTACTTCTCTGGAGGATATGGTTCATTTTCCCATAGAGGCCTCTGCATATACTGTCAATGTGTTTTTTCTCATCATCCACGTTTTTCTCCTCAGCCATTTTGATAGTATTTTTATTTTCAATTATTTGTGGAAAAGAACTGTGGACAATACAAATATTTTTCTCTTCATCTGTCTTCCATTAGTGTCTGAAGATTTGCTAGTCTATAGGGTCGTTTAGTTTTAGTTTGATATCTAGCTAGTTGATTCTTCTTTTTTTTGTTTTCTGTTTATCCCTCCTTACAGATCCAAAAGTAGAGGTCAAGATCAAATGTTGTTTGGTTTTTATTTATGGTGTCTTGTTCTTTTGTGATATGTGGATCAATCATTGTGGTGGATATTGAAACGTTGTAATGCTTATCAATTTGATTTACGAACTAAGAATTGGAGTGGATTTTGTTCTCAATGAATAGCGTTTTCTCAAGTGCAGGTGTCAACCATATCAGCCTCAGATTTTGTCAAATCGTTAAAAGGGTAAATTCGTTTTTCATTCAAACGATATGTGGAAACTATAAGATATTTATTGACTTCAGTCACTGTTATTGTGATATTTCCTTCAAATTTCATTCGACTTCTTTACACATTAATTACAATATTTACTCATTGTTCTTTTTCTCGCTCCTTTCTCTGGACCTCGAATTTCTTGCTATCTAATTTGGCAGTTTTTTTTCTTCCTTAAAGCATGTTTTAGTTCAAAATTCATCTACTCTTGCTATCTAATAAAGGATTATTTTCCAGACGAATTAGAGAAATTGGAGTAACAAGGATTGCTGACAAGATTAGAGGAGGTTTGGTAATTAATAATCCATTTTCTTTGTGTATTTTATTTGTTGTTTTGTTTATACTTTGAATATGCTCTAACCATGCATTTTGTCTCCATATAATTGCCCTAAAAGTTAATGACATAAGAAAAAAAAACTACAGAAGAACTTTTGACTTTAGTTTCTCATTGATCCTATAATAGTAATGCACTCTCCTCAATAAGATTCTGGCTACTGCTCTGGAAGAAGATTGTGAAAGTAGATTAATTGCATTTTCAAAAGACATTTGACAATAATTTTGTTTATTAGACATGTTTCTTGTCATTGTTTTGTATGTTTTCAATTAACGAGCCTAGACTTCAAAAGCTACTTCACTTAAGAGGCAATATCTATTCTCCTCAACCTCATACACACTAACAATGATCTGGTCTGTCTCTTCCTATTTTCTTTCTCTACTGATTTTTCTATGTACTAACGTCTCTTTTTTTTTTCTTTTGTAACATTGTGTAAACTATCTCTTGCTCAAATATAATTTTGTAAATTTGTAGGATTGTATGTTTCAAAGAAAATATTGAAGATTGATTCAAATGGATTTTTACAGCAGCATAAATGAGTTGAGAGCAACACAACTTCAACGTAAGTGTTTTTTTTTAAAAAAAAAAATTGATTTATTCTTTGTGGTTTAGTCTGAAAGGTTCTGCTTTTGCTTTTACATTTTTCAAATCTAATGTGATTAAGTCTGCAAGGTTTTGTTTCTGCTTTTGCATTTTGCATTCTTTAAATGATGCAATTTTGGCAACTCAAATATGCTTAATGAAAACAAAAAATCGTGTCCGTGTCGTGTTGCATGTTCGTGCTTAGATTAGAGATAATATCCCTAGTTTGAGTTTTTAGGAGTTTGTTTGGACCTTGAAGTTAACTTTGACTTTTTTAATTCAAAATTGAGTTTAGGTATTGTTCGTGTTTTTTGTTGGAGTTCTCGTTTGATTTGTTTGTTCCTAGGGTTCCAAAATATGGTTTTGAGACTTCTGAGTTTTCAAAGAAACATGGTTTCTAGTTTGAGGGTTAATTTCAAAACGGGGAGGGGTGAGGATCTTAAGTTTGAGGAGAAAATGGAAGTTTATTGATCTTTCTTTTCTTTTTTATTGATCTCTTCTTTTCTTCAAGTTTAAAGTCTCATTGCGGACTTTAGACTTGAAGAAAAGAAGAGATCAATAAAAAGGATTTATTTCATAATCTTATTATTTACATGTTTGTTCATTTTCATCTAGGAGCTATATCTTTTTGTTGTTCATTTACGAGAAATGTTTGATCCTCTCCATTTGAGGTCAACCATGGCCCATAACAAAAACCAGTTTTCCCTATAAACTGTGCAGATTATTCGAATTGATCTTTATCGAGCAAAATCACGAACCATTTGGCTTATTCTTTGGACTAATTACTGAATGTTGTAGTGTAGGAACTTTTGTGAATCATTTGGGTGATTTGAATGATGTATTGGATCGAACTCTTTTGCATTGTTGCTTGAGATATGGATATCCTTTTTAGGAATCAAGAACTTCATTATCAAAAGCCTTAACTATGCAACTCTCATGGGTATAAATTTTTTAAATATGTATCGATCATAATAAATCAAAAGTTTTTTAGACTGATAAATGCTCATTCGTTAATGTTAGGTATGAGATGTGGTTGGGAAGATTAACTGATGTGAGCTTAAGACAGTGCAGGATATGACCTTTGGAATTTTAGCTTCAATTTTCTTTATCATGCGACACAGGTTTAACTCTTTTGTTGTTTTTACTTAGAATTGCAAAATGAATATTCCCTTTTTTTTCATTCAATTTATAATTTTGTTGTAAGTCTTCCCAGTTAGCTACATGATAATTTGCTCATGTTTTATCTCTTTTCTGATAAACATTGGACTATGTATGTATGTATGAAGGAAAAGTTTTCTATTTGTTACGATGCATTTGAAAAATGACTTGCTAAGTAGAGTATGTAAAAAGAAATCTATCAGTAGGTACTACTTGATGGGAATCTTGTCTGCCTGCTCAAACTTAGTTATTACCCATATTCCAACTGCAGATGGAGAAAGCTAATTTCAGTTTGATGTCTGAGTTTTTCATTCAGCTATCTGTTATACGTTAAAGGCTTACTTAGTACGGGTTGTAAAGTTTGTTAAAGAGAGTATAGTATAGTTTGCAGGGCAAGGCAGTTTTATGGAAAATGAGAGACTACGAGTGTTAGCTTTACGACTTTCTTCTTGATTTATTGTGTTTTTAGTGGTAGTTTAGTTTATGACATGGTAGTTTTTCTTAAAAGAAGTAAAGTTTATAGTATTGTGGTTTGTACTAATTACCCACCACTAAATTTTGCAGGTGAAGAAGATTACTACGAATTGGGTGATGTTGAGGAGGAGGTCTGAGGAGGAATAACTTTCTAAGTCTTAATTTCATTCTTATCTTTTACTGAAATAGTGGTTGTTAGAAGGACTTAGTCGTTTTATTCAGTTTAGTGTTATTTAATTTGAGGGATGTATCTTATTCTTGTAGTTAGCATTGTGTTAGACTTATAAGATTATTCGAGTTATTGAAATGGAATTTGTTACAAGATCTGACTCGTAATTCTATTTGGAATTCTCTGGAGTTATTTGTTGTCTTAGTAGGTGGTTGAACTTTTGGTTAGCTACAGTTATGTCATTACGTTGCCGAAATTTTTGGTAGTCTTTTAGTGAATAATATGATTAAGTTTGGTAATGTCACTTATAGTTAGTAAATTTTGTGGGTGTTACACTATACATTATAAGACAAGTGACTTCGACAGATATATATGTTTTTACTTCTAAAAATGTATTTAAATATATTATAAACTAATTTAAGTTGATTTTTTAATATAATAACATTTGAAAAAATGGTATAAAACAACATAATATTAAAAAAAAAAACCTATTAAAAGTCAATTAGTGTCTATCATAGCAAGATTAAAAATGTTATGCTATACTTTCTATAACATTATTTCAATGTTATAAAAAATGTTATTAAAGACCAATCATAGCATTTTTCTAATGCTGTGAAATTTTTTCATAACATTAGAATTATGCAATAAAAAATGGACATTTTATAGCATATTCTATAGCGTTGAAAAAACGCTATGAAAAGTTAGAGACTTTCAATAACATCGGCTACAACAACGTGACAAAAAACGCTATGATATGTCTTTTATAGCATTGTTTAACTGCTATAAAAACGCTATAAAAGAGAAACCATAATGGTATTTTAACGCTATGAAAGGTTTCCATAACATTAGAATAACGCAATAGATATAGACTTTCTACAGCGATTTTGATAGCGAGAAAAAAACGCTATTAAAAGTCTCAGACTTTCAATAACATGGGCTACGACAGCGTTTCATAAAACGCTATCGTAGCCTTACGATAGCGTTTTTTGAATGCTATCGTATGTGATTTTTCTTGTAGTGTGGAGCAATACTTTACTAAGAATGATAAGGTGGAGGCGAGTAGCCTTATGGCAAAACTCACCTCTTCAAGATACATTGGTAAAGGGAATATAAGGGAATACATAATGCACATGTCCAACATGGCAACAAAACTCAAGGCATTAAAATTGGATGTCTCTGAAGACTTTTTGGTGCATTTGGTTTTGAACTCTCTTCCAGCGGAATATAGCCATTTCCGATTGAGTTACAACACTCAAAAGGAAAAAAGGACCCTGAATGAGCTGATTTTTCTCATTGTGTTCAAGAGGTAGAGAGATTGCAGCGGGAAAAGACAGAAAGTGTTCATATGACATCTACCTCAAAGAGTGTAAAGAGGAAAAAGAACAAATGATGTTGCAGAGTCTTCTAAGCAGAAAAAGGAAAAGAAGCAGGATTCAGGACATACTTGTTTCTTCTGCAAGAAGTTTGGGCACATGAAAAGGCAGTGTGGCAAGTATGTAGCCTAGCTACTAAAGAATGGTATGTTTCTCTCCCTTGTTTGTTCTGAGGTTAATTTAGCTTCTGTACCTATGCATACTTGGTGGGTAGATTCAGGTGCTACTACTCACATAAGTGTATCTATGCAGGGTTGCATTTGGAGCCAACCACCAAAGTGATGTTGAGGCTTTGATTTATGTGGCTGACGACAATAGAGCAAAAGTATAAGCTATAGGAACATTTAGATTATCTTTAGGAACTAGATTTCATTTGGATTTGTTTGAGACTTTTGTTGTTTCGTCATTTAGACAAAATTTAATTATGTTTCCTCTTTGGAAAAATTTGGTTACACTTGTGGCATAGTTCCTTGATGACCGCAAAGTGCACGGGCCGCAAGTAATATAAAACGGAAATTATTCCGAGTATCGAATCCTCAGGGATTGGATTTATTCAATTAATTACCATGAATAATCTTGCTTAGCTTTATTTAGAGAACAAAATCTAATGCCGAACAGAATAACAAAAAGCTAATCTAGAAAGCAAAAGATAAATGGCGACACAATTTGGAGGGATAATTCTAGAGTTGTTGATTTCGACAATTGGACCTTTAATGCGTAATCAATTAACTAATATGGATTAACAAATCATTTGATTCATAAGTCTAGAAGCCTAATGACAAGGACTCTCCTGTCGGTCTCCTCCTATCTCATACCTTTCAATAAAGAATCTCCTTTCAGTCTCATCTTTATTTACTTAGCATGGCATTACGACCCTTCAGTACAACCTCTAACGTTATTTATTTTATCCCGTGTCACCTGGGTAAATAACCGTTAGTCATGCATTCAGTTCTAGTCTAAGCTTCTCTCCTTCGAGTTTCCACTTAGTAACGATTCATTTAATCAGTGATCAGTTGATAAAAAGCATTACGGACAAAATGCACAAATGAACAATAATGACAATTAAACCACATCAATTCATTAATTCAGCAGAGGTTCAACATCTAAATCAATCTCATAGAATTTAGGAATTTACTACTCATAATCACTAAAATTCAATAATTCCTAATCACAACAATTCTAGAAACTAAAACATAAAGGAAAAGGGAAGAGAAATGCTCATAAAAGTGTCGATCTCCTCGATCCCGTGCCGACCTCTTTCGATCCCGAGCTCCAAAGATCTTCAACAAAGCTCCAAAACTCTCCCAAAAATCCCCAATTTTAGAGTGGATTCTAGAATGGGGTGAAAACCCACAAATTGGCACACCAAATATGGATGCAAAATGCTCCTTTTATAGGCTCCCAGCAGGCGTAGCGTCGAGACGCTAGATGGACAGCGTCGCGACGCTTTGACATCATCTTTTCTTGGGCTCCAAGACGTCGCAGCGTCGAGACGCTATCTAGACAGCGTCGCAACGCTATCGTGA

mRNA sequence

ATGGTCAATCTACTGAGTATGGGAGAGGTGACGCAAACTTGGACGCTCTTTGTAGATGGGTCCTCCAATACCAAGGGCTGCAGAGCAGGAATTTTACTGGAATCCCCAGATGGAGGAAGATTCGAGTACGCCTTGAGGTTTAATTTCAAGGCCTTGAATAATGAGGCTGAGTACGAGGCACTCCTTACAGGATTGAAGTTGGCCAGGGAGATCGGAGTATCAGACCTCCTGGTTCAGAGCGATTCACAACTAATTGTAAAGCAAGTGATGGCGGAGTATCAAACTAGGGAACAGAGAATGAGTAAATACTTATCCAAGGCTAGAGAAGTGCTGTCCAAATTTGAGAAGTGGGAGATCAAACAAATCCCAAGGTCTCAGAACGCCAACGCAGATTCACTAGTCCGCTTGGCGGCTGCCTACGATACAGAGTCGAGTAGGATTGTACCAGTTGAGGTTTTGTCTGAGCCAACTGTATGTACTAAGGAGGTTCTTGAGACAAATGGCCGAGCAGAGGCCGAGGCCGAGGATCTTGCAGATGGGGAGGGCACCCCATCAATTGAAACCGAGCCCTCCACTAAAGTAAGAGAAGTTTCATGGATGGATCCGATACTTGATTATTTAGGAAAAGGTGATGCTAACTATGTTATGACAGAGATACATGAGGGGGTGTGTGGCAATCATTCAAGAGGGAGGTCACTGTGTCACAAGATCGTCACGCAAGGTTACTACTGGCCAACGATGTTGCAAGACGCTAAATATTTCATGAGATCTTGCGACCAGTGCCAAAGGTTTGCGCCTATTCCAAGGCAACCACCTGATAAGGGGACAAATGATATCGGTTCTCATAAAGGTGATATAGGAGAAAAAGCTCGAAAGAGATTGTTCGACAATATAGGGCGCTGCCTAAGGCACCCTATATCGACTATAAGGGCAGCTGCAATCCCCATGGCAAAATGGGTGTCAACCATATCAGCCTCAGATTTTGTCAAATCGTTAAAAGGACGAATTAGAGAAATTGGAGTAACAAGGATTGCTGACAAGATTAGAGGAGGTGAAGAAGATTACTACGAATTGGGTGATGTTGAGGAGGAGACTTATAAGATTATTCGAGTTATTGAAATGGAATTTGTTACAAGATCTGACTCTGTGGAGCAATACTTTACTAAGAATGATAAGGTGGAGGCGAGTAGCCTTATGGCAAAACTCACCTCTTCAAGATACATTGGTAAAGGGAATATAAGGGAATACATAATGCACATGTCCAACATGGCAACAAAACTCAAGGCATTAAAATTGGATGTCTCTGAAGACTTTTTGGTGCATTTGGTTTTGAACTCTCTTCCAGCGGAATATAGCCATTTCCGATTGAGTTACAACACTCAAAAGGAAAAAAGGACCCTGAATGAGCTGATTTTTCTCATTGTGTTCAAGAGGGTTGCATTTGGAGCCAACCACCAAAGTGATGTTGAGGCTTTGATTTATGTGGCTGACGACAATAGAGCAAAAGCTCCCAGCAGGCGTAGCGTCGAGACGCTAGATGGACAGCGTCGCGACGCTTTGACATCATCTTTTCTTGGGCTCCAAGACGTCGCAGCGTCGAGACGCTATCTAGACAGCGTCGCAACGCTATCGTGA

Coding sequence (CDS)

ATGGTCAATCTACTGAGTATGGGAGAGGTGACGCAAACTTGGACGCTCTTTGTAGATGGGTCCTCCAATACCAAGGGCTGCAGAGCAGGAATTTTACTGGAATCCCCAGATGGAGGAAGATTCGAGTACGCCTTGAGGTTTAATTTCAAGGCCTTGAATAATGAGGCTGAGTACGAGGCACTCCTTACAGGATTGAAGTTGGCCAGGGAGATCGGAGTATCAGACCTCCTGGTTCAGAGCGATTCACAACTAATTGTAAAGCAAGTGATGGCGGAGTATCAAACTAGGGAACAGAGAATGAGTAAATACTTATCCAAGGCTAGAGAAGTGCTGTCCAAATTTGAGAAGTGGGAGATCAAACAAATCCCAAGGTCTCAGAACGCCAACGCAGATTCACTAGTCCGCTTGGCGGCTGCCTACGATACAGAGTCGAGTAGGATTGTACCAGTTGAGGTTTTGTCTGAGCCAACTGTATGTACTAAGGAGGTTCTTGAGACAAATGGCCGAGCAGAGGCCGAGGCCGAGGATCTTGCAGATGGGGAGGGCACCCCATCAATTGAAACCGAGCCCTCCACTAAAGTAAGAGAAGTTTCATGGATGGATCCGATACTTGATTATTTAGGAAAAGGTGATGCTAACTATGTTATGACAGAGATACATGAGGGGGTGTGTGGCAATCATTCAAGAGGGAGGTCACTGTGTCACAAGATCGTCACGCAAGGTTACTACTGGCCAACGATGTTGCAAGACGCTAAATATTTCATGAGATCTTGCGACCAGTGCCAAAGGTTTGCGCCTATTCCAAGGCAACCACCTGATAAGGGGACAAATGATATCGGTTCTCATAAAGGTGATATAGGAGAAAAAGCTCGAAAGAGATTGTTCGACAATATAGGGCGCTGCCTAAGGCACCCTATATCGACTATAAGGGCAGCTGCAATCCCCATGGCAAAATGGGTGTCAACCATATCAGCCTCAGATTTTGTCAAATCGTTAAAAGGACGAATTAGAGAAATTGGAGTAACAAGGATTGCTGACAAGATTAGAGGAGGTGAAGAAGATTACTACGAATTGGGTGATGTTGAGGAGGAGACTTATAAGATTATTCGAGTTATTGAAATGGAATTTGTTACAAGATCTGACTCTGTGGAGCAATACTTTACTAAGAATGATAAGGTGGAGGCGAGTAGCCTTATGGCAAAACTCACCTCTTCAAGATACATTGGTAAAGGGAATATAAGGGAATACATAATGCACATGTCCAACATGGCAACAAAACTCAAGGCATTAAAATTGGATGTCTCTGAAGACTTTTTGGTGCATTTGGTTTTGAACTCTCTTCCAGCGGAATATAGCCATTTCCGATTGAGTTACAACACTCAAAAGGAAAAAAGGACCCTGAATGAGCTGATTTTTCTCATTGTGTTCAAGAGGGTTGCATTTGGAGCCAACCACCAAAGTGATGTTGAGGCTTTGATTTATGTGGCTGACGACAATAGAGCAAAAGCTCCCAGCAGGCGTAGCGTCGAGACGCTAGATGGACAGCGTCGCGACGCTTTGACATCATCTTTTCTTGGGCTCCAAGACGTCGCAGCGTCGAGACGCTATCTAGACAGCGTCGCAACGCTATCGTGA

Protein sequence

MVNLLSMGEVTQTWTLFVDGSSNTKGCRAGILLESPDGGRFEYALRFNFKALNNEAEYEALLTGLKLAREIGVSDLLVQSDSQLIVKQVMAEYQTREQRMSKYLSKAREVLSKFEKWEIKQIPRSQNANADSLVRLAAAYDTESSRIVPVEVLSEPTVCTKEVLETNGRAEAEAEDLADGEGTPSIETEPSTKVREVSWMDPILDYLGKGDANYVMTEIHEGVCGNHSRGRSLCHKIVTQGYYWPTMLQDAKYFMRSCDQCQRFAPIPRQPPDKGTNDIGSHKGDIGEKARKRLFDNIGRCLRHPISTIRAAAIPMAKWVSTISASDFVKSLKGRIREIGVTRIADKIRGGEEDYYELGDVEEETYKIIRVIEMEFVTRSDSVEQYFTKNDKVEASSLMAKLTSSRYIGKGNIREYIMHMSNMATKLKALKLDVSEDFLVHLVLNSLPAEYSHFRLSYNTQKEKRTLNELIFLIVFKRVAFGANHQSDVEALIYVADDNRAKAPSRRSVETLDGQRRDALTSSFLGLQDVAASRRYLDSVATLS

Homology

[Close]

BLAST of Lag0038443 vs. NCBI nr
Match: XP_022154103.1 (uncharacterized protein LOC111021439 [Momordica charantia])

HSP 1 Score: 282.7 bits (722), Expect = 6.6e-72
Identity = 151/288 (52.43%), Postives = 193/288 (67.01%), Query Frame = 0


Query: 9   EVTQTWTLFVDGSSNTKGCRAGILLESPDGGRFEYALRFNFKALNNEAEYEALLTGLKLA 68
           E  Q WTL+VDGSSN +GC A +LL SPD  RFEYALRFNF A NNEAEYEALL GLK+A
Sbjct: 103 EEEQLWTLYVDGSSNFRGCGARLLLISPDKERFEYALRFNFHASNNEAEYEALLAGLKVA 162

Query: 69  REIGVSDLLVQSDSQLIVKQVMAEYQTREQRMSKYLSKAREVLSKFEKWEIKQIPRSQNA 128
           R +GV ++L+ SDSQLIV QV  E+Q RE RM+KYLS+ R  L +F K+EI+QIPR+QN 
Sbjct: 163 RYVGVRNILILSDSQLIVGQVKEEFQARESRMTKYLSQVRNQLDQFSKYEIRQIPRAQNV 222

Query: 129 NADSLVRLAAAYDTESSRIVPVEVLSEPTVCTKEVLETNGRAEAE-------AEDLADG- 188
           NAD+L RLA  Y+T+  R VPVE+L  P++  +E ++ + + + E        + L DG 
Sbjct: 223 NADALARLATTYETDLGRTVPVEILLGPSIEAQEAMDIDDQGQPEENWKSLLIKYLKDGI 282

Query: 189 EGTPSIETE-----------PSTKVREVSWMDPILDYLGKGDANYVMTEIHEGVCGNHSR 248
             T  IE +               + +  +  P+L  L   +A+YVM EIHEGVCG+HS 
Sbjct: 283 LPTEKIEAQQLQQRAARYVLKDDNLYKRGYSLPLLKCLTPDEADYVMREIHEGVCGSHSG 342

Query: 249 GRSLCHKIVTQGYYWPTMLQDAKYFMRSCDQCQRFAPIPRQPPDKGTN 278
            RSL HKI+ QGYYWPTML D K F + CD+CQRFA +PRQPP+  T+
Sbjct: 343 ARSLSHKIIRQGYYWPTMLNDTKQFTKKCDKCQRFATVPRQPPEPLTS 390

[Close]

BLAST of Lag0038443 vs. NCBI nr
Match: XP_022158579.1 (uncharacterized protein LOC111025033 [Momordica charantia])

HSP 1 Score: 277.3 bits (708), Expect = 2.8e-70
Identity = 147/288 (51.04%), Postives = 191/288 (66.32%), Query Frame = 0


Query: 9   EVTQTWTLFVDGSSNTKGCRAGILLESPDGGRFEYALRFNFKALNNEAEYEALLTGLKLA 68
           E  Q WTL+VDGSSN +GC AG+LL SPD  RFEYAL+FNF A NNE EYEALL  LK+ 
Sbjct: 310 EEEQLWTLYVDGSSNFRGCGAGLLLISPDKERFEYALQFNFHASNNEVEYEALLAALKVY 369

Query: 69  REIGVSDLLVQSDSQLIVKQVMAEYQTREQRMSKYLSKAREVLSKFEKWEIKQIPRSQNA 128
           R +GV ++L+ SDSQLIV QV  ++Q RE RM+KYLS+ R  L +F K+EI+QIP +QN 
Sbjct: 370 RYVGVRNILILSDSQLIVGQVKEKFQARELRMAKYLSQVRNQLDQFSKYEIRQIPHAQNV 429

Query: 129 NADSLVRLAAAYDTESSRIVPVEVLSEPTVCTKEVLETNGRAEAE-------AEDLADG- 188
           NAD L RLA AY+T+  R VPVE+L  P++  +E ++ + + + E        + L DG 
Sbjct: 430 NADVLARLAVAYETDLGRTVPVEILPGPSIEAQEAMDIDNQGQPEENWKSPLIKYLKDGI 489

Query: 189 EGTPSIETE-----------PSTKVREVSWMDPILDYLGKGDANYVMTEIHEGVCGNHSR 248
             T  IE +               + ++ +  P+L  L   +A+YVM EIHEGVCG+HS 
Sbjct: 490 LPTEKIEAQQLQRRAARYVLKDDNLYKIGYSLPLLKCLTPDEADYVMREIHEGVCGSHSG 549

Query: 249 GRSLCHKIVTQGYYWPTMLQDAKYFMRSCDQCQRFAPIPRQPPDKGTN 278
            RSL HKI+ QGYYWPTML D K F + CD+CQRFA +PRQPP+  T+
Sbjct: 550 ARSLSHKIIRQGYYWPTMLNDTKXFTKKCDKCQRFATVPRQPPEPLTS 597

[Close]

BLAST of Lag0038443 vs. NCBI nr
Match: XP_022156792.1 (uncharacterized protein LOC111023626 [Momordica charantia])

HSP 1 Score: 271.2 bits (692), Expect = 2.0e-68
Identity = 141/266 (53.01%), Postives = 183/266 (68.80%), Query Frame = 0


Query: 8   GEVTQTWTLFVDGSSNTKGCRAGILLESPDGGRFEYALRFNFKALNNEAEYEALLTGLKL 67
           G+V   WTL+VDGSSN KGC AG+LL  PDG RF YALRF F+A NNEAEYEAL+ GLK+
Sbjct: 193 GDVRDQWTLYVDGSSNEKGCGAGMLLLGPDGLRFGYALRFGFRASNNEAEYEALINGLKV 252

Query: 68  AREIGVSDLLVQSDSQLIVKQVMAEYQTREQRMSKYLSKAREVLSKFEKWEIKQIPRSQN 127
           AR +GV  LL+ SDSQLIV  V  EYQ +E RM +YL+KAR +L++FE + I+Q+PRS+N
Sbjct: 253 ARGMGVRRLLILSDSQLIVNPVTEEYQVKEARMDRYLAKARGLLAQFEDYVIQQVPRSKN 312

Query: 128 ANADSLVRLAAAYDTESSRIVPVEVLSEPTVCTKEVLETNGRAEAEAEDLADGEGTPSIE 187
           +NAD+L RLA+AY+T+  R VPVE+L+E ++   E++E         + + D     S+ 
Sbjct: 313 SNADALARLASAYETDLPRTVPVEILAESSIDQPEIIEITSAQPTWIDPIKDFLVNGSVL 372

Query: 188 TEPSTKVREVSWMDPILDYLGKGDANYVMTEIHEGVCGNHSRGRSLCHKIVTQGYYWPTM 247
            +PS        +DP        +A YVM EIHEGVCGNH R RS   K+V QGYYWPT+
Sbjct: 373 ADPS------QCLDP-------EEARYVMREIHEGVCGNHGRARSTASKVVRQGYYWPTI 432

Query: 248 LQDAKYFMRSCDQCQRFAPIPRQPPD 274
            +D K F ++C +CQRFA I RQPP+
Sbjct: 433 ERDTKEFAKTCVKCQRFASISRQPPE 445

[Close]

BLAST of Lag0038443 vs. NCBI nr
Match: XP_022157610.1 (uncharacterized protein LOC111024267 [Momordica charantia])

HSP 1 Score: 260.4 bits (664), Expect = 3.5e-65
Identity = 128/275 (46.55%), Postives = 186/275 (67.64%), Query Frame = 0


Query: 14  WTLFVDGSSNTKGCRAGILLESPDGGRFEYALRFNFKALNNEAEYEALLTGLKLAREIGV 73
           WT++VDGSSN KGC AGILL +PDG RFEYALRFNF   NNEAEYE LL GL++A+ +G 
Sbjct: 55  WTIYVDGSSNEKGCGAGILLLAPDGMRFEYALRFNFWTSNNEAEYETLLAGLRVAKGLGA 114

Query: 74  SDLLVQSDSQLIVKQVMAEYQTREQRMSKYLSKAREVLSKFEKWEIKQIPRSQNANADSL 133
           + + V +DSQL+V Q+  EY+ ++ RM KYLSK R  L++F+ +E+ Q+PR +N+N D+L
Sbjct: 115 THIKVFNDSQLVVNQIKEEYKAKDSRMEKYLSKVRSHLAQFKTYEVNQVPRLENSNVDAL 174

Query: 134 VRLAAAYDTESSRIVPVEVLSEPTVCTKEVLETNGRAEAEAEDLADG-EGTPSIETEPST 193
            +LA+AY+T+ +R +PVE+L  P++   ++++ +  A    + + +  +G P  +++   
Sbjct: 175 AKLASAYETDLARSIPVEILDNPSILEPDIMDVDATAPMWMDPVVEFIKGNPPQDSKEHK 234

Query: 194 KVREVS--------------WMDPILDYLGKGDANYVMTEIHEGVCGNHSRGRSLCHKIV 253
           K+   +              +  P+L      + NY++ EIHEGVCGNHSR R+L  K+V
Sbjct: 235 KMARRAAQFVLRDGALYSRGFSLPLLKCATPEEGNYILREIHEGVCGNHSRVRALSAKVV 294

Query: 254 TQGYYWPTMLQDAKYFMRSCDQCQRFAPIPRQPPD 274
            QGYYWPT+ QDAK FM++CD CQRFA I  QPP+
Sbjct: 295 RQGYYWPTVDQDAKQFMKTCDNCQRFASIIHQPPE 329

[Close]

BLAST of Lag0038443 vs. NCBI nr
Match: XP_022156575.1 (uncharacterized protein LOC111023451 [Momordica charantia])

HSP 1 Score: 255.0 bits (650), Expect = 1.5e-63
Identity = 129/282 (45.74%), Postives = 180/282 (63.83%), Query Frame = 0


Query: 7   MGEVTQTWTLFVDGSSNTKGCRAGILLESPDGGRFEYALRFNFKALNNEAEYEALLTGLK 66
           + E    WT++VDGSSN KGC AG+LL  P G RFEYALRF+F+  NNEAEYEA + GL+
Sbjct: 93  LSESDLPWTVYVDGSSNEKGCGAGVLLLGPGGERFEYALRFSFRTSNNEAEYEAFIXGLR 152

Query: 67  LAREIGVSDLLVQSDSQLIVKQVMAEYQTREQRMSKYLSKAREVLSKFEKWEIKQIPRSQ 126
           +AR +G S + V SDSQL+V Q+  EYQ ++ RM  YL K R  L++F  +E+ +IPR++
Sbjct: 153 IARTLGASCVKVFSDSQLVVSQIKDEYQAKDTRMEXYLGKVRSYLAQFRTYEVSRIPRAE 212

Query: 127 NANADSLVRLAAAYDTESSRIVPVEVLSEPTVCTKEVLETNGRAEAEAEDLAD--GEGTP 186
           N+NAD+L +LA+AY+T+ +R VPVE+L  P++   +++E      +  + + D     +P
Sbjct: 213 NSNADALAKLASAYETDLARSVPVEILDNPSILEPDLMEVGAPESSWMDPITDFIRGNSP 272

Query: 187 SIETEPSTKVREVS-------------WMDPILDYLGKGDANYVMTEIHEGVCGNHSRGR 246
               E     R  +             +  P+L  L   +  YV+ EIHEGVCGNHS  R
Sbjct: 273 QDPKERRKLARRTARLVVRDGALYRRGFSLPLLKCLTPEEGLYVLREIHEGVCGNHSGAR 332

Query: 247 SLCHKIVTQGYYWPTMLQDAKYFMRSCDQCQRFAPIPRQPPD 274
           SL  K++ QGYYWPT+ QDAK F+R+CD CQR+  I RQPP+
Sbjct: 333 SLSAKVIRQGYYWPTLSQDAKQFVRTCDNCQRYGTIIRQPPE 374

[Close]

BLAST of Lag0038443 vs. ExPASy Swiss-Prot
Match: Q9HSF6 (Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) OX=64091 GN=rnhA PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.0e-11
Identity = 43/123 (34.96%), Postives = 68/123 (55.28%), Query Frame = 0


Query: 17  FVDGSS--NTKGCRAGILLESPDGGRFEYALRFNFKALNNEAEYEALLTGLKLAREIGVS 76
           + DG+S  N      G +L S DGG          +A NN+AEY+AL+  L+ A + G  
Sbjct: 73  YFDGASRGNPGPAAVGWVLVSGDGGIVAEGGDTIGRATNNQAEYDALIAALEAAADFGFD 132

Query: 77  DLLVQSDSQLIVKQVMAEYQTREQRMSKYLSKAREVLSKFEKWEIKQIPRSQNANADSLV 136
           D+ ++ DSQL+ KQ+   + T +  + +   +ARE+L+ F+ W I  +PR+ N  AD+L 
Sbjct: 133 DIELRGDSQLVEKQLTGAWDTNDPDLRRKRVRARELLTGFDDWSITHVPRATNERADALA 192

Query: 137 RLA 138
             A
Sbjct: 193 NEA 195

[Close]

BLAST of Lag0038443 vs. ExPASy Swiss-Prot
Match: P9WLH5 (Bifunctional protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2228c PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 5.9e-07
Identity = 45/163 (27.61%), Postives = 78/163 (47.85%), Query Frame = 0


Query: 50  KALNNEAEYEALLTGLKLAREIGVSDLLVQSDSQLIVKQVMAEYQTREQRMSKYLSKARE 109
           +A NN AEY  L+ GL  A ++G ++  V  DS+L+V+Q+   ++ +   + K   +A+ 
Sbjct: 42  RATNNVAEYRGLIAGLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQA 101

Query: 110 VLSKFEKWEIKQIPRSQNANADSLVRLA-------AAYDTESSRIVPVEVLSEP------ 169
           + S+F +   + +PR++N  AD L   A       AA D + ++IV  E  + P      
Sbjct: 102 LASQFRRINYEWVPRARNTYADRLANDAMDAAAQSAAADADPAKIVATESPTSPGWTGAR 161

Query: 170 TVCTKEVLETNGRAEAEAEDLADGEGTPSIETEPSTKVREVSW 200
              T+ +L  +G+ E   +    G G P +         EV W
Sbjct: 162 GTPTRLLLLRHGQTELSEQRRYSGRGNPGL--------NEVGW 196

[Close]

BLAST of Lag0038443 vs. ExPASy Swiss-Prot
Match: P9WLH4 (Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2287 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 5.9e-07
Identity = 45/163 (27.61%), Postives = 78/163 (47.85%), Query Frame = 0


Query: 50  KALNNEAEYEALLTGLKLAREIGVSDLLVQSDSQLIVKQVMAEYQTREQRMSKYLSKARE 109
           +A NN AEY  L+ GL  A ++G ++  V  DS+L+V+Q+   ++ +   + K   +A+ 
Sbjct: 42  RATNNVAEYRGLIAGLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQA 101

Query: 110 VLSKFEKWEIKQIPRSQNANADSLVRLA-------AAYDTESSRIVPVEVLSEP------ 169
           + S+F +   + +PR++N  AD L   A       AA D + ++IV  E  + P      
Sbjct: 102 LASQFRRINYEWVPRARNTYADRLANDAMDAAAQSAAADADPAKIVATESPTSPGWTGAR 161

Query: 170 TVCTKEVLETNGRAEAEAEDLADGEGTPSIETEPSTKVREVSW 200
              T+ +L  +G+ E   +    G G P +         EV W
Sbjct: 162 GTPTRLLLLRHGQTELSEQRRYSGRGNPGL--------NEVGW 196

[Close]

BLAST of Lag0038443 vs. ExPASy Swiss-Prot
Match: P64956 (Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB2253C PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 5.9e-07
Identity = 45/163 (27.61%), Postives = 78/163 (47.85%), Query Frame = 0


Query: 50  KALNNEAEYEALLTGLKLAREIGVSDLLVQSDSQLIVKQVMAEYQTREQRMSKYLSKARE 109
           +A NN AEY  L+ GL  A ++G ++  V  DS+L+V+Q+   ++ +   + K   +A+ 
Sbjct: 42  RATNNVAEYRGLIAGLDDAVKLGATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQA 101

Query: 110 VLSKFEKWEIKQIPRSQNANADSLVRLA-------AAYDTESSRIVPVEVLSEP------ 169
           + S+F +   + +PR++N  AD L   A       AA D + ++IV  E  + P      
Sbjct: 102 LASQFRRINYEWVPRARNTYADRLANDAMDAAAQSAAADADPAKIVATESPTSPGWTGAR 161

Query: 170 TVCTKEVLETNGRAEAEAEDLADGEGTPSIETEPSTKVREVSW 200
              T+ +L  +G+ E   +    G G P +         EV W
Sbjct: 162 GTPTRLLLLRHGQTELSEQRRYSGRGNPGL--------NEVGW 196

[Close]

BLAST of Lag0038443 vs. ExPASy Swiss-Prot
Match: F9VN79 (Ribonuclease HI OS=Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) OX=273063 GN=rnhA PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.2e-06
Identity = 31/91 (34.07%), Postives = 52/91 (57.14%), Query Frame = 0


Query: 47  FNFKALNNEAEYEALLTGLKLAREIGVSDLLVQSDSQLIVKQVMAEYQTREQRMSKYLSK 106
           F+  + NN AEY  L+  ++    +G+S  +++ DSQL++KQ+  EY+ + +R+     K
Sbjct: 42  FSINSTNNVAEYSGLICLMETMLRLGISSPIIKGDSQLVIKQMNGEYKVKAKRIIPLYEK 101

Query: 107 AREVLSKFEKWEIKQIPRSQNANADSLVRLA 138
           A E+  K     I  +PR +N  AD L R+A
Sbjct: 102 AIELKKKLNATLI-WVPREENKEADRLSRVA 131

[Close]

BLAST of Lag0038443 vs. ExPASy TrEMBL
Match: A0A6J1DJC7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111021439 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 3.2e-72
Identity = 151/288 (52.43%), Postives = 193/288 (67.01%), Query Frame = 0


Query: 9   EVTQTWTLFVDGSSNTKGCRAGILLESPDGGRFEYALRFNFKALNNEAEYEALLTGLKLA 68
           E  Q WTL+VDGSSN +GC A +LL SPD  RFEYALRFNF A NNEAEYEALL GLK+A
Sbjct: 103 EEEQLWTLYVDGSSNFRGCGARLLLISPDKERFEYALRFNFHASNNEAEYEALLAGLKVA 162

Query: 69  REIGVSDLLVQSDSQLIVKQVMAEYQTREQRMSKYLSKAREVLSKFEKWEIKQIPRSQNA 128
           R +GV ++L+ SDSQLIV QV  E+Q RE RM+KYLS+ R  L +F K+EI+QIPR+QN 
Sbjct: 163 RYVGVRNILILSDSQLIVGQVKEEFQARESRMTKYLSQVRNQLDQFSKYEIRQIPRAQNV 222

Query: 129 NADSLVRLAAAYDTESSRIVPVEVLSEPTVCTKEVLETNGRAEAE-------AEDLADG- 188
           NAD+L RLA  Y+T+  R VPVE+L  P++  +E ++ + + + E        + L DG 
Sbjct: 223 NADALARLATTYETDLGRTVPVEILLGPSIEAQEAMDIDDQGQPEENWKSLLIKYLKDGI 282

Query: 189 EGTPSIETE-----------PSTKVREVSWMDPILDYLGKGDANYVMTEIHEGVCGNHSR 248
             T  IE +               + +  +  P+L  L   +A+YVM EIHEGVCG+HS 
Sbjct: 283 LPTEKIEAQQLQQRAARYVLKDDNLYKRGYSLPLLKCLTPDEADYVMREIHEGVCGSHSG 342

Query: 249 GRSLCHKIVTQGYYWPTMLQDAKYFMRSCDQCQRFAPIPRQPPDKGTN 278
            RSL HKI+ QGYYWPTML D K F + CD+CQRFA +PRQPP+  T+
Sbjct: 343 ARSLSHKIIRQGYYWPTMLNDTKQFTKKCDKCQRFATVPRQPPEPLTS 390

[Close]

BLAST of Lag0038443 vs. ExPASy TrEMBL
Match: A0A6J1DZU0 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025033 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.3e-70
Identity = 147/288 (51.04%), Postives = 191/288 (66.32%), Query Frame = 0


Query: 9   EVTQTWTLFVDGSSNTKGCRAGILLESPDGGRFEYALRFNFKALNNEAEYEALLTGLKLA 68
           E  Q WTL+VDGSSN +GC AG+LL SPD  RFEYAL+FNF A NNE EYEALL  LK+ 
Sbjct: 310 EEEQLWTLYVDGSSNFRGCGAGLLLISPDKERFEYALQFNFHASNNEVEYEALLAALKVY 369

Query: 69  REIGVSDLLVQSDSQLIVKQVMAEYQTREQRMSKYLSKAREVLSKFEKWEIKQIPRSQNA 128
           R +GV ++L+ SDSQLIV QV  ++Q RE RM+KYLS+ R  L +F K+EI+QIP +QN 
Sbjct: 370 RYVGVRNILILSDSQLIVGQVKEKFQARELRMAKYLSQVRNQLDQFSKYEIRQIPHAQNV 429

Query: 129 NADSLVRLAAAYDTESSRIVPVEVLSEPTVCTKEVLETNGRAEAE-------AEDLADG- 188
           NAD L RLA AY+T+  R VPVE+L  P++  +E ++ + + + E        + L DG 
Sbjct: 430 NADVLARLAVAYETDLGRTVPVEILPGPSIEAQEAMDIDNQGQPEENWKSPLIKYLKDGI 489

Query: 189 EGTPSIETE-----------PSTKVREVSWMDPILDYLGKGDANYVMTEIHEGVCGNHSR 248
             T  IE +               + ++ +  P+L  L   +A+YVM EIHEGVCG+HS 
Sbjct: 490 LPTEKIEAQQLQRRAARYVLKDDNLYKIGYSLPLLKCLTPDEADYVMREIHEGVCGSHSG 549

Query: 249 GRSLCHKIVTQGYYWPTMLQDAKYFMRSCDQCQRFAPIPRQPPDKGTN 278
            RSL HKI+ QGYYWPTML D K F + CD+CQRFA +PRQPP+  T+
Sbjct: 550 ARSLSHKIIRQGYYWPTMLNDTKXFTKKCDKCQRFATVPRQPPEPLTS 597

[Close]

BLAST of Lag0038443 vs. ExPASy TrEMBL
Match: A0A6J1DSX0 (uncharacterized protein LOC111023626 OS=Momordica charantia OX=3673 GN=LOC111023626 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 9.6e-69
Identity = 141/266 (53.01%), Postives = 183/266 (68.80%), Query Frame = 0


Query: 8   GEVTQTWTLFVDGSSNTKGCRAGILLESPDGGRFEYALRFNFKALNNEAEYEALLTGLKL 67
           G+V   WTL+VDGSSN KGC AG+LL  PDG RF YALRF F+A NNEAEYEAL+ GLK+
Sbjct: 193 GDVRDQWTLYVDGSSNEKGCGAGMLLLGPDGLRFGYALRFGFRASNNEAEYEALINGLKV 252

Query: 68  AREIGVSDLLVQSDSQLIVKQVMAEYQTREQRMSKYLSKAREVLSKFEKWEIKQIPRSQN 127
           AR +GV  LL+ SDSQLIV  V  EYQ +E RM +YL+KAR +L++FE + I+Q+PRS+N
Sbjct: 253 ARGMGVRRLLILSDSQLIVNPVTEEYQVKEARMDRYLAKARGLLAQFEDYVIQQVPRSKN 312

Query: 128 ANADSLVRLAAAYDTESSRIVPVEVLSEPTVCTKEVLETNGRAEAEAEDLADGEGTPSIE 187
           +NAD+L RLA+AY+T+  R VPVE+L+E ++   E++E         + + D     S+ 
Sbjct: 313 SNADALARLASAYETDLPRTVPVEILAESSIDQPEIIEITSAQPTWIDPIKDFLVNGSVL 372

Query: 188 TEPSTKVREVSWMDPILDYLGKGDANYVMTEIHEGVCGNHSRGRSLCHKIVTQGYYWPTM 247
            +PS        +DP        +A YVM EIHEGVCGNH R RS   K+V QGYYWPT+
Sbjct: 373 ADPS------QCLDP-------EEARYVMREIHEGVCGNHGRARSTASKVVRQGYYWPTI 432

Query: 248 LQDAKYFMRSCDQCQRFAPIPRQPPD 274
            +D K F ++C +CQRFA I RQPP+
Sbjct: 433 ERDTKEFAKTCVKCQRFASISRQPPE 445

[Close]

BLAST of Lag0038443 vs. ExPASy TrEMBL
Match: A0A6J1DTK4 (uncharacterized protein LOC111024267 OS=Momordica charantia OX=3673 GN=LOC111024267 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.7e-65
Identity = 128/275 (46.55%), Postives = 186/275 (67.64%), Query Frame = 0


Query: 14  WTLFVDGSSNTKGCRAGILLESPDGGRFEYALRFNFKALNNEAEYEALLTGLKLAREIGV 73
           WT++VDGSSN KGC AGILL +PDG RFEYALRFNF   NNEAEYE LL GL++A+ +G 
Sbjct: 55  WTIYVDGSSNEKGCGAGILLLAPDGMRFEYALRFNFWTSNNEAEYETLLAGLRVAKGLGA 114

Query: 74  SDLLVQSDSQLIVKQVMAEYQTREQRMSKYLSKAREVLSKFEKWEIKQIPRSQNANADSL 133
           + + V +DSQL+V Q+  EY+ ++ RM KYLSK R  L++F+ +E+ Q+PR +N+N D+L
Sbjct: 115 THIKVFNDSQLVVNQIKEEYKAKDSRMEKYLSKVRSHLAQFKTYEVNQVPRLENSNVDAL 174

Query: 134 VRLAAAYDTESSRIVPVEVLSEPTVCTKEVLETNGRAEAEAEDLADG-EGTPSIETEPST 193
            +LA+AY+T+ +R +PVE+L  P++   ++++ +  A    + + +  +G P  +++   
Sbjct: 175 AKLASAYETDLARSIPVEILDNPSILEPDIMDVDATAPMWMDPVVEFIKGNPPQDSKEHK 234

Query: 194 KVREVS--------------WMDPILDYLGKGDANYVMTEIHEGVCGNHSRGRSLCHKIV 253
           K+   +              +  P+L      + NY++ EIHEGVCGNHSR R+L  K+V
Sbjct: 235 KMARRAAQFVLRDGALYSRGFSLPLLKCATPEEGNYILREIHEGVCGNHSRVRALSAKVV 294

Query: 254 TQGYYWPTMLQDAKYFMRSCDQCQRFAPIPRQPPD 274
            QGYYWPT+ QDAK FM++CD CQRFA I  QPP+
Sbjct: 295 RQGYYWPTVDQDAKQFMKTCDNCQRFASIIHQPPE 329

[Close]

BLAST of Lag0038443 vs. ExPASy TrEMBL
Match: A0A6J1DQP4 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111023451 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 7.1e-64
Identity = 129/282 (45.74%), Postives = 180/282 (63.83%), Query Frame = 0


Query: 7   MGEVTQTWTLFVDGSSNTKGCRAGILLESPDGGRFEYALRFNFKALNNEAEYEALLTGLK 66
           + E    WT++VDGSSN KGC AG+LL  P G RFEYALRF+F+  NNEAEYEA + GL+
Sbjct: 93  LSESDLPWTVYVDGSSNEKGCGAGVLLLGPGGERFEYALRFSFRTSNNEAEYEAFIXGLR 152

Query: 67  LAREIGVSDLLVQSDSQLIVKQVMAEYQTREQRMSKYLSKAREVLSKFEKWEIKQIPRSQ 126
           +AR +G S + V SDSQL+V Q+  EYQ ++ RM  YL K R  L++F  +E+ +IPR++
Sbjct: 153 IARTLGASCVKVFSDSQLVVSQIKDEYQAKDTRMEXYLGKVRSYLAQFRTYEVSRIPRAE 212

Query: 127 NANADSLVRLAAAYDTESSRIVPVEVLSEPTVCTKEVLETNGRAEAEAEDLAD--GEGTP 186
           N+NAD+L +LA+AY+T+ +R VPVE+L  P++   +++E      +  + + D     +P
Sbjct: 213 NSNADALAKLASAYETDLARSVPVEILDNPSILEPDLMEVGAPESSWMDPITDFIRGNSP 272

Query: 187 SIETEPSTKVREVS-------------WMDPILDYLGKGDANYVMTEIHEGVCGNHSRGR 246
               E     R  +             +  P+L  L   +  YV+ EIHEGVCGNHS  R
Sbjct: 273 QDPKERRKLARRTARLVVRDGALYRRGFSLPLLKCLTPEEGLYVLREIHEGVCGNHSGAR 332

Query: 247 SLCHKIVTQGYYWPTMLQDAKYFMRSCDQCQRFAPIPRQPPD 274
           SL  K++ QGYYWPT+ QDAK F+R+CD CQR+  I RQPP+
Sbjct: 333 SLSAKVIRQGYYWPTLSQDAKQFVRTCDNCQRYGTIIRQPPE 374

[Close]

BLAST of Lag0038443 vs. TAIR 10
Match: AT3G01410.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 1.2e-10
Identity = 41/119 (34.45%), Postives = 65/119 (54.62%), Query Frame = 0


Query: 15  TLFVDGSS--NTKGCRAGILLESPDGGRFEYALRFNFKALNNEAEYEALLTGLKLAREIG 74
           T+  DG+S  N     AG +L + D     Y       A NN AEY ALL GL+ A + G
Sbjct: 156 TIEFDGASKGNPGKAGAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLRSALDKG 215

Query: 75  VSDLLVQSDSQLIVKQVMAEYQTREQRMSKYLSKAREVLSKFEKWEIKQIPRSQNANAD 132
             ++ V  DS L+  QV   ++T   +M++   +A+E+++ F+ ++IK I R +N+ AD
Sbjct: 216 FKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEAD 274

[Close]

BLAST of Lag0038443 vs. TAIR 10
Match: AT3G01410.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 1.2e-10
Identity = 41/119 (34.45%), Postives = 65/119 (54.62%), Query Frame = 0


Query: 15  TLFVDGSS--NTKGCRAGILLESPDGGRFEYALRFNFKALNNEAEYEALLTGLKLAREIG 74
           T+  DG+S  N     AG +L + D     Y       A NN AEY ALL GL+ A + G
Sbjct: 156 TIEFDGASKGNPGKAGAGAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLRSALDKG 215

Query: 75  VSDLLVQSDSQLIVKQVMAEYQTREQRMSKYLSKAREVLSKFEKWEIKQIPRSQNANAD 132
             ++ V  DS L+  QV   ++T   +M++   +A+E+++ F+ ++IK I R +N+ AD
Sbjct: 216 FKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEAD 274

[Close]

BLAST of Lag0038443 vs. TAIR 10
Match: AT1G24090.1 (RNase H family protein )

HSP 1 Score: 58.2 bits (139), Expect = 2.5e-08
Identity = 39/127 (30.71%), Postives = 67/127 (52.76%), Query Frame = 0


Query: 15  TLFVDGSSNTKG----CRAGILLESPDGGRFEYALRFNFKALNNEAEYEALLTGLKLARE 74
           T F++    +KG      A  +L++ DG       +    A NN AEY AL+ GLK A E
Sbjct: 216 TCFIEFDGASKGNPGLSGAAAVLKTEDGSLICRVRQGLGIATNNAAEYHALILGLKYAIE 275

Query: 75  IGVSDLLVQSDSQLIVKQVMAEYQTREQRMSKYLSKAREVLSKFEKWEIKQIPRSQNANA 134
            G  ++ V+ DS+L+  Q+  +++   + ++K   +A+ + +K   +EI  + R+ NA+A
Sbjct: 276 KGYKNIKVKGDSKLVCMQIKGQWKVNHEVLAKLHKEAKLLCNKCVSFEISHVLRNLNADA 335

Query: 135 DSLVRLA 138
           D    LA
Sbjct: 336 DEQANLA 342

[Close]

BLAST of Lag0038443 vs. TAIR 10
Match: AT5G53670.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 2.0e-05
Identity = 27/86 (31.40%), Postives = 45/86 (52.33%), Query Frame = 0


Query: 382 SVEQYFTKNDKVEASSLMAKLTSSRYIGKGNIREYIMHMSNMATKLKALKLD---VSEDF 441
           S+E +F KN++ E S + A+ +S  YI   N+RE IM M  +  K K L ++    ++  
Sbjct: 116 SLENFFAKNEEAERSRVQAESSSMSYIENENVRELIMRMKTLGAKRKRLGINNIFSNDMM 175

Query: 442 LVHLVLNSLPAEYSHFRLSYNTQKEK 465
           L H  +  LP +Y   +  Y+  + K
Sbjct: 176 LAHCAVKMLPLQYISLKNVYSCLEGK 201

The following BLAST results are available for this feature:

BLAST of Lag0038443 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154103.1	6.6e-72	52.43	uncharacterized protein LOC111021439 [Momordica charantia]	[more]
XP_022158579.1	2.8e-70	51.04	uncharacterized protein LOC111025033 [Momordica charantia]	[more]
XP_022156792.1	2.0e-68	53.01	uncharacterized protein LOC111023626 [Momordica charantia]	[more]
XP_022157610.1	3.5e-65	46.55	uncharacterized protein LOC111024267 [Momordica charantia]	[more]
XP_022156575.1	1.5e-63	45.74	uncharacterized protein LOC111023451 [Momordica charantia]	[more]

BLAST of Lag0038443 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9HSF6	1.0e-11	34.96	Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC...	[more]
P9WLH5	5.9e-07	27.61	Bifunctional protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / ...	[more]
P9WLH4	5.9e-07	27.61	Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / ...	[more]
P64956	5.9e-07	27.61	Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF...	[more]
F9VN79	2.2e-06	34.07	Ribonuclease HI OS=Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC ...	[more]

BLAST of Lag0038443 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJC7	3.2e-72	52.43	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111021439 PE=4 SV=1	[more]
A0A6J1DZU0	1.3e-70	51.04	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025033 PE=4 SV=1	[more]
A0A6J1DSX0	9.6e-69	53.01	uncharacterized protein LOC111023626 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DTK4	1.7e-65	46.55	uncharacterized protein LOC111024267 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DQP4	7.1e-64	45.74	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111023451 PE=4 SV=1	[more]

BLAST of Lag0038443 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01410.1	1.2e-10	34.45	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G01410.2	1.2e-10	34.45	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G24090.1	2.5e-08	30.71	RNase H family protein	[more]
AT5G53670.1	2.0e-05	31.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 382..471 e-value: 8.3E-13 score: 48.3
None	No IPR available	GENE3D	1.10.340.70		coord: 200..264 e-value: 1.4E-10 score: 43.3
None	No IPR available	PANTHER	PTHR46387	POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN	coord: 10..248
None	No IPR available	PANTHER	PTHR46387:SF6	14.7 KDA RIBONUCLEASE H-LIKE PROTEIN	coord: 10..248
None	No IPR available	CDD	cd09279	RNase_HI_like	coord: 14..138 e-value: 1.75236E-45 score: 154.168
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 15..150 e-value: 6.8E-30 score: 105.8
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 18..136 e-value: 2.3E-19 score: 69.4
IPR002156	Ribonuclease H domain	PROSITE	PS50879	RNASE_H	coord: 10..139 score: 13.311896
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 214..265 e-value: 8.3E-9 score: 35.4
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 12..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0038443.1	Lag0038443.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity