Lag0038417 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0038417
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr2: 16995690 .. 16999506 (+)
RNA-Seq Expression	Lag0038417
Synteny	Lag0038417

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATCAGGTTTAAAAGTGTAAATCAAACATCAAAATGATTTTGAATGATTAAGGACATATTTCGAAGTGATTTTGAATATGACAAAAATGATTTTAGGCATTTCAAAATCACTCTCAAACATGCACTTCTAGCAAATTGCACAGATTGTGTTATAGGAAACCTCGAGCATCAAATCGCGTCATCTCCTCTCTCATTTTTCCCTTTTCCAAAATCTTTTCTTAAAGAAAGAAAAATTAGAAATCCCCTTTTCTATAATCAATGTAACGTACATTTTTCATTTATTTTGTACACTAATTAAATCATATTTTAAAACGTTTCAATACTTGTCTCGTCTAATGGTATTTGTGCTACTCAATATCTACTAAATTGACCTACATCGAATCAATACATGGCCATATACTAGCACATTCATAGACATTATTCAAAACTAGATTATCCAAAATTCGTGACAAGAACAATTTTTTTCTTTTTGAAAAGTTGAAGTACTAAATAGACATTTTGAAAGTATAAAGACAAATTAAAAATAAAATAAATCAATAAGTTTAGAGATCAAAGTGATATTAAAACCATAATCACTTCAAATACAGTTGGCCACGCCCATCTATGGCTCGAACTGGCTGCCGAATGAGTTCTCGCTTCAAATACAGTCGGCTCCAGTGCTTTCTCCTGCTAGTACGGTGAGTGAGTTGTTCACTGCGTCTGGTGGATGGGATGTGGCTTTACTCAGGACGATTTTCAATGGGGCTGATTGTGAGGCTATTTTGAGAATTCCTCTGCGAAAGGGCTCGGGGGAGGATCGCTTAATCTGGCACTTTGAGAAGCATTTTTCAGTGAAGAGTGGGTATCGACTTGCTCATACATTGGCTACTCAAGACCGACCTGGTTCCTCGAACTCCGAGAGAGTGCGCATATGGTGGTCCGACCTCTGGAGGTTGAATGTGCCCAATAAGCATAGGTTCTTCCTCTGGCGTCTGTGCCACGACTGCTTGCCAACTAAGGTAAACCTTCTCAAACGTGGACTCACTGTATCCCCTTTGTGTGTTTTGTGTGATGATGATGCAGAAGAATGTCTCCATCTATTCTGGACATGCCCTGTGGTTAAGAGTATGTGGTTGGGCTCCAATTTTGCCCTCTTCCACCAATCCTTTTCCCATTTCAGGTTCGAGGAAATCATTGGGGCGATGAGGGACAAACTGACAGGGCTGGATTTTGAGCTTGTGGTCTGTGTGGAATCTACGAAACAGCCTGTTTTGGGGTGGGCAGTTAGACGGTCGGGATCTCTAGGCATATTCGAGTGATTACCTCAGTGCCTTCCATGTTGGTGGGGGACGTTGCGGGGCAAGGGACTCCTCATGGGCTCAATCGAGAGAGCGGGAAGAGCGCGATGTATGGAGACCGCCCCCTAATAGGGAGCTGAAACTTAATATCGATGCTTCGGTACGGCCGAATACAGGGGAAGCGGGGGGTGGCTGTGTGCTGCGAGGGGCTGAGGGTGAGGTATTCATGGCAACTTGTTTGAGCTTACAGAGGTGTTGAAGCGTGGATTTGGCTGAGGGTTGGGCTGTGTATAGAGGGATCCAACTTCCTCGACAGTTGGGGTTTGTGGATTTTGTGGTGGAGACTGACTCTCTAAGACTGGTCAAAATTCTGAATGGGGAGTTGCATGATGTGTCGGAAGTGGGGCTGCTGATGGATGACATTCGAAGGATCCTCAGTCCTTGGGTCAACAGTAAGGTGTTGTTTACTCCACGTCAGGGGAACAAGGTTGCGCATGTTCTGGCCCGCCTGGCCTTTTCATACGTTGATCGTGTATGGCTTGAGGAGTGGCCTAGTGAGGTCTCGGACGTCCTGAGGGGTGATTTTGTTTCAGTTGCGTGAGAAGGGCTTCTTAGTGCGATAATGGTGTTTCGAGCTAAGCGTTCAGTCTCTCCTTATCGTTGTGCCAAACTAGGGAAGGTTTCTGTTTCCCTTTCACTTGTCGTTTATACATTGTCTTATGGTTGCATAGTAGATTTTTCTGGGGATAGTGTATGATGTCGATTGGGGGTGGTAGCATGTATTTACTAGGGGTAACTAGGCATTGAGTCTAGATGCATCTGCGCGGCAGTTTGGTGTTTGCATGGTATGCTGTTTGGTTTTCTCTCTGTTTAGTTTTGGCTTGTGGTCCGTTATTTGTGTGTTGGGCCTGTTATGAGTTGATTTTTGTTTTGGCCCTTAGAAGGGGGGTGAGGTGTTGGGCTTTTTGTGATAATTTCTGTATGTGTTGTTATACTCTATTTTGCCTAGAATTGAGGCGATGACTGATAACATATTGTGAGCCTGGTTTTAAATTATGTCTTGATTATTCTTGCATATCTGTGCACGTGGCCTCCCTTTTGGCTAGTCTTGCAGGTCTAGGCTTGCTTTATAGGTCTCCCCAAGTTTGTTGTCACCTCGATAGGATATGGGGTTTAGCCAGAGAGTCTATTTGCGTTTCAGATTATGGTTGTTCGCATGAGGCACAAAATAAGGGGTAAAAAGAGCTGCCTGCAGGGTGATCAGTTAGGCCAACCAAGATAATGCTCTGGTTAGGGGTCCCTTCTCTGCAGTGCGAAAGCTAGTACCCTGCCTCTGAGTGGAAAGAAAATGGTGAGTATGGAAAGTTTTGAAAGATTGTTTTGAGAATGAAAGAAGAATGAAAATGAAATGAATAAGTCTGACACGAATGTCGGAATTGAGAGGGAAAGTTTGAGTGAGGATAGAGTTGGCCCAGGCTTCTGGGTAGCGTGCTAGCATCCTAATTTGTTTCCTTTAGCTCTTAGGCGAGACCTTTGTTCCAGTGTAGGGGGAAGATGGATGGTGGGTGTCTATAAATCTTGTCAGGGCTTCTAGGGCTGCTCTAGGTGAGACTTGTCACACACTCACGTGAGAATTCTCTGGATAACTTTGGCTTGCTTCATTCGTGTGGTCAGGTATATTTCGCCTCTTCTGGGTAGGATTTAGCTTTCGCCATGCAAGGTGTTATCTATGAGGGTTCCCAATTCCAGAGCCCTTCAGGGCAAAGTATGCTTCTGGGTAGCGTGCTAGCATCCTAATTTGTTTCCTTTAGCTCTTAGGCGAGACCTTTGTTCCAGTGTAGGGGGAAGATGGATGGTGGGTGTCTATAAATCTTGTCAGGGCTTCTAGGGCTGCTCTAGGTGAGACTTGTCACACACTCACGTGAGAATTCTCTGGATAACTTTGGCTTGCTTCATTCGTGTGGTCAGGTATATTTCGCCTCTTCTGGGTAGGATTTAGCTTTCGCCATGCAAGGTGTTATCTATGAGGGTTCCCAATTCCAGAGCCCTTCAGGGCAAAGTATGCTGCTTAGGCCTACTTGGGGTGTCCATGTGGGGTGCTTGGTTGTTGTAGTAATGGTCATAAGCTGTTTGGTTTCTCTTTCTGAGTTGTTTGATGGCTTATTTATGCAATCTGCTTCACTCTCTGGGATATTGTTATGCAGGTTTATTTGTGCACGCTTTGCGAGGAGGATCTTATGTGTGTATGATTGCTTTCGCTAGAATGCCAACTCCTATGGTTTCTTGTTGGGAAGCTCAAGGTGCTGGAGGCGTGTCTTGGTAGATGGGCCTGTGGATAAGATGGACCATGACAATGCACCACCTTGCCATATTTTGCCATTAAGACTCCAGGTAGATGGACCAGTGCCCATGATTGGTGGTCTTTTGATTTGAGTGCAAGCCAGTCTGAAAGCCAGGGGCTAGGTTGGAAGGAAGTTCATTGTACTCTGGCGGCTAGCTACATTGGGGGAATCCAATCTGATTGTTTTGCTTAG

mRNA sequence

ATGGAAAATCAGTTGGCCACGCCCATCTATGGCTCGAACTGGCTGCCGAATGAGTTCTCGCTTCAAATACAGTCGGCTCCAGTGCTTTCTCCTGCTAGTACGGTGAGTGAGTTGTTCACTGCGTCTGGTGGATGGGATGTGGCTTTACTCAGGACGATTTTCAATGGGGCTGATTGTGAGGCTATTTTGAGAATTCCTCTGCGAAAGGGCTCGGGGGAGGATCGCTTAATCTGGCACTTTGAGAAGCATTTTTCAGTGAAGAGTGGGTATCGACTTGCTCATACATTGGCTACTCAAGACCGACCTGGTTCCTCGAACTCCGAGAGAGTGCGCATATGGTGGTCCGACCTCTGGAGGTTGAATGTGCCCAATAAGCATAGGTTCTTCCTCTGGCGTCTGTGCCACGACTGCTTGCCAACTAAGGTAAACCTTCTCAAACGTGGACTCACTGTATCCCCTTTGTGTGTTTTGTGTGATGATGATGCAGAAGAATGTCTCCATCTATTCTGGACATGCCCTGTGGTTAAGAGTATGTGGTTGGGCTCCAATTTTGCCCTCTTCCACCAATCCTTTTCCCATTTCAGGTTCGAGGAAATCATTGGGGCGATGAGGGACAAACTGACAGGGCTGGATTTTGAGCTTGTGGCATATTCGAGTGATTACCTCAGTGCCTTCCATGTTGGTGGGGGACGTTGCGGGGCAAGGGACTCCTCATGGGCTCAATCGAGAGAGCGGGAAGAGCGCGATGTATGGAGACCGCCCCCTAATAGGGAGCTGAAACTTAATATCGATGCTTCGGTACGGCCGAATACAGGGGAAGCGGGGGGTGGCTGTGTGCTGCGAGGGGCTGAGGGTGAGTTGGGGTTTGTGGATTTTGTGGTGGAGACTGACTCTCTAAGACTGGTCAAAATTCTGAATGGGGAGTTGCATGATGTGTCGGAAGTGGGGCTGCTGATGGATGACATTCGAAGGATCCTCAGTCCTTGGGTCAACAGTAAGGTGTTGTTTACTCCACGTCAGGGGAACAAGGTTGCGCATGTTCTGGCCCGCCTGGCCTTTTCATACGTTGATCGTGTATGGCTTGAGGAGTGGCCTAGTGAGGTCTCGGACGTCCTGAGGGGTCTAGGCTTGCTTTATAGGTCTCCCCAAGTTTGTTGTCACCTCGATAGGATATGGGGTTTAGCCAGAGAGTCTATTTGCGTTTCAGATTATGGTTGTTCGCATGAGGCACAAAATAAGGGTGCGAAAGCTAGTACCCTGCCTCTGAGTGGAAAGAAAATGGATTTAGCTTTCGCCATGCAAGGTGTTATCTATGAGGGTTCCCAATTCCAGAGCCCTTCAGGGCAAACTTTCGCCATGCAAGGTGTTATCTATGAGGGTTCCCAATTCCAGAGCCCTTCAGGGCAAAGTTTATTTGTGCACGCTTTGCGAGGAGGATCTTATGTGTGTATGATTGCTTTCGCTAGAATGCCAACTCCTATGGTTTCTTGTTGGGAAGCTCAAGGTAGATGGACCAGTGCCCATGATTGGTGGTCTTTTGATTTGAGTGCAAGCCAGTCTGAAAGCCAGGGGCTAGGTTGGAAGGAAGTTCATTGTACTCTGGCGGCTAGCTACATTGGGGGAATCCAATCTGATTGTTTTGCTTAG

Coding sequence (CDS)

ATGGAAAATCAGTTGGCCACGCCCATCTATGGCTCGAACTGGCTGCCGAATGAGTTCTCGCTTCAAATACAGTCGGCTCCAGTGCTTTCTCCTGCTAGTACGGTGAGTGAGTTGTTCACTGCGTCTGGTGGATGGGATGTGGCTTTACTCAGGACGATTTTCAATGGGGCTGATTGTGAGGCTATTTTGAGAATTCCTCTGCGAAAGGGCTCGGGGGAGGATCGCTTAATCTGGCACTTTGAGAAGCATTTTTCAGTGAAGAGTGGGTATCGACTTGCTCATACATTGGCTACTCAAGACCGACCTGGTTCCTCGAACTCCGAGAGAGTGCGCATATGGTGGTCCGACCTCTGGAGGTTGAATGTGCCCAATAAGCATAGGTTCTTCCTCTGGCGTCTGTGCCACGACTGCTTGCCAACTAAGGTAAACCTTCTCAAACGTGGACTCACTGTATCCCCTTTGTGTGTTTTGTGTGATGATGATGCAGAAGAATGTCTCCATCTATTCTGGACATGCCCTGTGGTTAAGAGTATGTGGTTGGGCTCCAATTTTGCCCTCTTCCACCAATCCTTTTCCCATTTCAGGTTCGAGGAAATCATTGGGGCGATGAGGGACAAACTGACAGGGCTGGATTTTGAGCTTGTGGCATATTCGAGTGATTACCTCAGTGCCTTCCATGTTGGTGGGGGACGTTGCGGGGCAAGGGACTCCTCATGGGCTCAATCGAGAGAGCGGGAAGAGCGCGATGTATGGAGACCGCCCCCTAATAGGGAGCTGAAACTTAATATCGATGCTTCGGTACGGCCGAATACAGGGGAAGCGGGGGGTGGCTGTGTGCTGCGAGGGGCTGAGGGTGAGTTGGGGTTTGTGGATTTTGTGGTGGAGACTGACTCTCTAAGACTGGTCAAAATTCTGAATGGGGAGTTGCATGATGTGTCGGAAGTGGGGCTGCTGATGGATGACATTCGAAGGATCCTCAGTCCTTGGGTCAACAGTAAGGTGTTGTTTACTCCACGTCAGGGGAACAAGGTTGCGCATGTTCTGGCCCGCCTGGCCTTTTCATACGTTGATCGTGTATGGCTTGAGGAGTGGCCTAGTGAGGTCTCGGACGTCCTGAGGGGTCTAGGCTTGCTTTATAGGTCTCCCCAAGTTTGTTGTCACCTCGATAGGATATGGGGTTTAGCCAGAGAGTCTATTTGCGTTTCAGATTATGGTTGTTCGCATGAGGCACAAAATAAGGGTGCGAAAGCTAGTACCCTGCCTCTGAGTGGAAAGAAAATGGATTTAGCTTTCGCCATGCAAGGTGTTATCTATGAGGGTTCCCAATTCCAGAGCCCTTCAGGGCAAACTTTCGCCATGCAAGGTGTTATCTATGAGGGTTCCCAATTCCAGAGCCCTTCAGGGCAAAGTTTATTTGTGCACGCTTTGCGAGGAGGATCTTATGTGTGTATGATTGCTTTCGCTAGAATGCCAACTCCTATGGTTTCTTGTTGGGAAGCTCAAGGTAGATGGACCAGTGCCCATGATTGGTGGTCTTTTGATTTGAGTGCAAGCCAGTCTGAAAGCCAGGGGCTAGGTTGGAAGGAAGTTCATTGTACTCTGGCGGCTAGCTACATTGGGGGAATCCAATCTGATTGTTTTGCTTAG

Protein sequence

MENQLATPIYGSNWLPNEFSLQIQSAPVLSPASTVSELFTASGGWDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEKHFSVKSGYRLAHTLATQDRPGSSNSERVRIWWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALFHQSFSHFRFEEIIGAMRDKLTGLDFELVAYSSDYLSAFHVGGGRCGARDSSWAQSREREERDVWRPPPNRELKLNIDASVRPNTGEAGGGCVLRGAEGELGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQGNKVAHVLARLAFSYVDRVWLEEWPSEVSDVLRGLGLLYRSPQVCCHLDRIWGLARESICVSDYGCSHEAQNKGAKASTLPLSGKKMDLAFAMQGVIYEGSQFQSPSGQTFAMQGVIYEGSQFQSPSGQSLFVHALRGGSYVCMIAFARMPTPMVSCWEAQGRWTSAHDWWSFDLSASQSESQGLGWKEVHCTLAASYIGGIQSDCFA

Homology

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BLAST of Lag0038417 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 216.5 bits (550), Expect = 5.8e-52
Identity = 129/409 (31.54%), Postives = 202/409 (49.39%), Query Frame = 0


Query: 9    IYGSNWLPNEFSLQIQSAPVLSPASTVSELFT-ASGGWDVALLRTIFNGADCEAILRIPL 68
            IYG NW+PN+ +L+I S+P L   S VS L     GGW   ++R  F   + + IL IP+
Sbjct: 727  IYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGGWQGDVVRDEFTPDEAKGILSIPI 786

Query: 69   RKGSGEDRLIWHFEKH--FSVKSGYRLA-HTLATQDRPGSSNSERVRIWWSDLWRLNVPN 128
             +G+ EDRLIW++EK   +SV+SGY++A         P SS+SE VR WW+  W++++PN
Sbjct: 787  GRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCVQAPSSSSSEEVRCWWNGFWKMHIPN 846

Query: 129  KHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNF 188
            K + FLWRLC D LPT  NL KRG+ ++  C  C  + E+ +HLFW C   +++W+ S F
Sbjct: 847  KIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALWINSKF 906

Query: 189  ALF---------HQSFSHFRFEEI------------IGAMRDK---LTGLDFELVAYSSD 248
                        H+S S   FEE+              A  D    +  +  ELV +++ 
Sbjct: 907  GKLSPFLILRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVEWANK 966

Query: 249  YLSAFHVGGGRCGARDSSWAQSREREERDVWRPPPNRELKLNIDASVRPNTGEAGGGCVL 308
            Y   F        A+ +            +W+PP     K+N DAS   +   AG G ++
Sbjct: 967  YAMEFR------EAKSNPITGRVTNTAEILWQPPDEGIYKINTDASFLASDQHAGLGIII 1026

Query: 309  RGAEGEL-----GFVDFVVETDSLRLVKILNG-----------ELHDVSEVGLLMDDIRR 368
                G++      +++ +   D    +  + G            L D+SE G ++   + 
Sbjct: 1027 HNDRGQVMAAATKYLENIQSVDMAEAIAAVEGLQLASEIGMHPALEDLSETGEIVLKAKN 1086

Query: 369  ILSPWVNSKVLFTPRQGNKVAHVLARLAFSYVD-RVWLEEWPSEVSDVL 373
              +  +++   F  R+GNK AH+LAR A    +  +W+E+WP E+   L
Sbjct: 1087 FWTQSLHASFNFVKREGNKAAHMLARRALLLHEFSIWMEDWPLELKSCL 1129

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BLAST of Lag0038417 vs. NCBI nr
Match: VVA32947.1 (PREDICTED: retrotransposon [Prunus dulcis])

HSP 1 Score: 186.0 bits (471), Expect = 8.5e-43
Identity = 132/433 (30.48%), Postives = 193/433 (44.57%), Query Frame = 0


Query: 3    NQLATPIYGSNWLPNEFSLQIQSAPVLSPASTVSELFTASGGWDVALLRTIFNGADCEAI 62
            N ++  +Y   WLP     +I S P L  ++ V +LFT+SG W+V LL+ IF   + +A 
Sbjct: 860  NGVSIQVYTDKWLPAPSFFKIMSPPQLPLSTLVCDLFTSSGQWNVPLLKDIFWDQEVDAK 919

Query: 63   LRIPLRKGSGEDRLIWHFEKH--FSVKSGYRLAHTLATQDRPGSSNSERVRI---WWSDL 122
            L+IPL   +G D LIWH+E++  +SVKSGYRLA     +D+     S RV +   +W  +
Sbjct: 920  LQIPLASLAGHDCLIWHYERNGMYSVKSGYRLA--CLEKDKMSGEPSVRVDLNSKFWKKI 979

Query: 123  WRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKS 182
            W L +PNK +FFLWR   D LP    L  R +  +P+C  C   AE  LH  W C   K 
Sbjct: 980  WALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPNCHRKAESVLHAVWLCETAKE 1039

Query: 183  MWLGSNFALFHQSFSHFRFEEIIGAMRDKLTGLDFELVAY-----------------SSD 242
            +W  S +    + +    F E+  A++   +G +  L AY                 S  
Sbjct: 1040 VWRNSAWGNVCEEWRVNSFRELWHALQLSSSGEEQGLFAYLCWGLWNRRNSFIFEGKSET 1099

Query: 243  YLSAFH----VGGGRCGARDSSWA----QSREREERDVWRPPPNRELKLNIDASVRPNTG 302
                 H    +      A + S      QS  +     WRPPP    K+N+D +V+    
Sbjct: 1100 ATQLLHRMTKLAQEFSNANNLSHTIHGRQSSPQAPLHGWRPPPAGIYKINVDGAVKSGDS 1159

Query: 303  EAGGGCVLRGAEGE--------------------------------LGFVDFVVETDSLR 362
              G G V+R A GE                                +GF   V+E D+  
Sbjct: 1160 VRGVGVVVRNANGEFMAACVRRIQASYGARQTELMATIEGLRFAIDMGFTAAVLEMDAQD 1219

Query: 363  LVKILNGELHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQGNKVAHVLARLAFSYVDRV- 373
             +  +          GLL++++  +L  +      +TPR GNKVAH LA+ AF   + V 
Sbjct: 1220 CINSILSTEECNGIDGLLIEEVNYLLHNFRAVVCQWTPRSGNKVAHTLAQFAFHCNEFVT 1279

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BLAST of Lag0038417 vs. NCBI nr
Match: ONI01138.1 (hypothetical protein PRUPE_6G123900 [Prunus persica])

HSP 1 Score: 181.4 bits (459), Expect = 2.1e-41
Identity = 138/433 (31.87%), Postives = 196/433 (45.27%), Query Frame = 0


Query: 9    IYGSNWLPNEFSLQIQSAPVLSPASTVSELFTASGGWDVALLRTIFNGADCEAILRIPLR 68
            +Y   WLP     +I S P L  ++ V +LFT+SG W+V LL+ IF   + +AIL+IPL 
Sbjct: 600  VYTDKWLPAPSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLKDIFWDQEVDAILQIPLA 659

Query: 69   KGSGEDRLIWHFEKH--FSVKSGYRLAHTLATQDRPGSSNSERVRI---WWSDLWRLNVP 128
              +G D LIWH+E++  +SVKSGYRLA     +D+     S RV +   +W  +W L +P
Sbjct: 660  SLAGHDCLIWHYERNGMYSVKSGYRLAG--LEKDKMSGEPSARVDLNSKFWKKIWALKIP 719

Query: 129  NKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSN 188
            NK +FFLWR   D LP    L  R +  +P+C  C   AE  LH  W C   K +W  S 
Sbjct: 720  NKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPKCHRKAESVLHAVWLCEAAKEVWRNSA 779

Query: 189  FALFHQSFSHFRFEEIIGAMRDKLTGLDFELVAY-------------------------- 248
            +    + +    F E+  A++   +G +  L AY                          
Sbjct: 780  WGNVCEVWRVNSFRELWHALQLSSSGEEQGLFAYLCWGLWNRRNSFIFEGKSETAIQLLS 839

Query: 249  --------SSDYLSAFHVGGGRCGARDSSWAQSREREERDVWRPPP---NRELKLNIDAS 308
                     SD  +  H   GR         QS  +     WRPPP   + +    +   
Sbjct: 840  RMTKLAQEFSDANNILHTIHGR---------QSSPQAPLQGWRPPPAVKSGDSVRGVGVV 899

Query: 309  VRPNTGEAGGGCVLR-----GA---------EG-----ELGFVDFVVETDSLR-LVKILN 368
            VR   GE    CV R     GA         EG     ++GF D ++E D+   L  I +
Sbjct: 900  VRNANGEFMAACVRRIHASYGARQTELMATIEGLRFAIDMGFTDAILEMDAQDCLNSIFS 959

Query: 369  GELHD------VSEVGLLMDDIRRILSPWVNSKVLFTPRQGNKVAHVLARLAFSYVDRV- 373
             E ++      + EV  L+++ R ++  W       TPR GNKVAH LA+ AF   + V 
Sbjct: 960  TEEYNGIDGPLLEEVNYLLNNFRAVVCHW-------TPRCGNKVAHTLAQFAFHCNEFVT 1014

[Close]

BLAST of Lag0038417 vs. NCBI nr
Match: XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])

HSP 1 Score: 178.7 bits (452), Expect = 1.4e-40
Identity = 121/422 (28.67%), Postives = 190/422 (45.02%), Query Frame = 0


Query: 9    IYGSNWLPNEFSLQIQSAPVLSPASTVSELFTASGGWDVALLRTIFNGADCEAILRIPLR 68
            +YG+NW+P   + +  SAP +   +TV+EL      W   L+   F   D EAI++IPL 
Sbjct: 733  VYGNNWIPRPTTFKPISAPSMGTDTTVAELIDEKQQWREDLILQHFRPEDAEAIMQIPLP 792

Query: 69   KGSGEDRLIWHFEK--HFSVKSGYRLAHTLATQDRPGSSNSERVRIWWSDLWRLNVPNKH 128
            K   ED+LIWH++K  ++SVKSGY++A  +   + P  SN +  +  W  +W+L +P K 
Sbjct: 793  KRPKEDQLIWHYDKKGYYSVKSGYQVAMRIKFPEDPSCSNHD--QNLWRFIWKLAIPEKV 852

Query: 129  RFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFA- 188
            + FLWR  HD LPT  NL K+ +   P+C  C    E   H    C   + +W  SN A 
Sbjct: 853  KIFLWRAAHDLLPTAENLWKKKVLQEPMCQSCHCHVETVSHALVECNRARKIWRYSNLAE 912

Query: 189  ----------LFHQSFSHFRFEEIIGAMRDKLTGL----------------DFELVAYSS 248
                      ++   F   +  ++ GA    L                      +VA + 
Sbjct: 913  ELRGVYRCDIVWMLQFWPRQHAKVEGAEVAALLWAIWKARNKWLFEGKKENPLRVVANAE 972

Query: 249  DYLSAFHVGGGRCGARDSSWAQSREREERDVWRPPPNRELKLNIDASVRPNTGEAGGGCV 308
              + +F     +    +  +      E +  W PPPN   K+N+DA+V      AG G V
Sbjct: 973  AIVESFK----KIRQPEMVYKTKGNAERQKQWSPPPNGWQKVNVDAAVDVENQMAGLGVV 1032

Query: 309  LRGAEG-------------------------------ELGFVDF-VVETDSLRLVKILNG 368
            +R ++G                               E   + F + E+DSL ++ ++N 
Sbjct: 1033 VRDSDGNCRAAAIKSLRLPGSVAMAEATAMEWGLKVAEKAHITFGIFESDSLEVIDLINK 1092

[Close]

BLAST of Lag0038417 vs. NCBI nr
Match: XP_042958055.1 (uncharacterized protein LOC122293570 [Carya illinoinensis])

HSP 1 Score: 171.8 bits (434), Expect = 1.7e-38
Identity = 119/421 (28.27%), Postives = 185/421 (43.94%), Query Frame = 0


Query: 9    IYGSNWLPNEF--SLQIQSAPVLSPASTVSELFTASGGWDVALLRTIFNGADCEAILRIP 68
            I+   WLP     S+Q Q   + S A     +   + GW   L+   FN  + EAI  IP
Sbjct: 800  IWKDKWLPTRIIHSVQSQIKNLSSDAKVQQLIDDDTRGWKKELIADTFNADEAEAICSIP 859

Query: 69   LRKGSGEDRLIWHFEK--HFSVKSGYRLAHTLATQDRPGSSNSERVRIWWSDLWRLNVPN 128
            L K    D+L+W   +   FSVK+ Y L H    +    +S        W+ +W LNVP+
Sbjct: 860  LSKWGAVDKLVWGSSQDGKFSVKNAYHLEHERMKRRIGETSIGCNPGNGWNMIWGLNVPS 919

Query: 129  KHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNF 188
              + FLW++ HD LPT+ NL K+ +  +  C +C+   E  +H+ W CP    +W     
Sbjct: 920  VIKHFLWKVSHDILPTRQNLYKKHVVENDKCPICELVPETAMHVIWCCPATTDVWAEEGS 979

Query: 189  ALFHQSFSHFRFEEIIGAMRDKLTGLDFELVA----------YSSDYLSAFH-----VGG 248
             +   S     F  +   +  +L G + ELVA           S  +   F      +  
Sbjct: 980  PVQKWSCHETDFMVVWDKLNSQLKGEEVELVACIMRKIWLRRNSLLFEKKFDDPRNIIKA 1039

Query: 249  GRCGARDSSWAQSRERE-------ERDV--WRPPPNRELKLNIDASVRPNTGEAGGGCVL 308
              CG R+   AQ  +++       +R +  W  P    +K+N DA+V       G G V+
Sbjct: 1040 ASCGLREFISAQRDQQKAVVKGSNDRRITKWEKPTGWTVKVNWDAAVDAKNKRVGAGVVI 1099

Query: 309  RGAEGEL--------------------------------GFVDFVVETDSLRLVKILNGE 368
            R +EGEL                                GF   ++E DS  +V  +N +
Sbjct: 1100 RDSEGELLACLCSICDHVQNPLVAEALALRRAAILSVEMGFSSVILEGDSQLIVNAVNSD 1159

[Close]

BLAST of Lag0038417 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.8e-52
Identity = 129/409 (31.54%), Postives = 202/409 (49.39%), Query Frame = 0


Query: 9    IYGSNWLPNEFSLQIQSAPVLSPASTVSELFT-ASGGWDVALLRTIFNGADCEAILRIPL 68
            IYG NW+PN+ +L+I S+P L   S VS L     GGW   ++R  F   + + IL IP+
Sbjct: 727  IYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGGWQGDVVRDEFTPDEAKGILSIPI 786

Query: 69   RKGSGEDRLIWHFEKH--FSVKSGYRLA-HTLATQDRPGSSNSERVRIWWSDLWRLNVPN 128
             +G+ EDRLIW++EK   +SV+SGY++A         P SS+SE VR WW+  W++++PN
Sbjct: 787  GRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCVQAPSSSSSEEVRCWWNGFWKMHIPN 846

Query: 129  KHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNF 188
            K + FLWRLC D LPT  NL KRG+ ++  C  C  + E+ +HLFW C   +++W+ S F
Sbjct: 847  KIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALWINSKF 906

Query: 189  ALF---------HQSFSHFRFEEI------------IGAMRDK---LTGLDFELVAYSSD 248
                        H+S S   FEE+              A  D    +  +  ELV +++ 
Sbjct: 907  GKLSPFLILRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVEWANK 966

Query: 249  YLSAFHVGGGRCGARDSSWAQSREREERDVWRPPPNRELKLNIDASVRPNTGEAGGGCVL 308
            Y   F        A+ +            +W+PP     K+N DAS   +   AG G ++
Sbjct: 967  YAMEFR------EAKSNPITGRVTNTAEILWQPPDEGIYKINTDASFLASDQHAGLGIII 1026

Query: 309  RGAEGEL-----GFVDFVVETDSLRLVKILNG-----------ELHDVSEVGLLMDDIRR 368
                G++      +++ +   D    +  + G            L D+SE G ++   + 
Sbjct: 1027 HNDRGQVMAAATKYLENIQSVDMAEAIAAVEGLQLASEIGMHPALEDLSETGEIVLKAKN 1086

Query: 369  ILSPWVNSKVLFTPRQGNKVAHVLARLAFSYVD-RVWLEEWPSEVSDVL 373
              +  +++   F  R+GNK AH+LAR A    +  +W+E+WP E+   L
Sbjct: 1087 FWTQSLHASFNFVKREGNKAAHMLARRALLLHEFSIWMEDWPLELKSCL 1129

[Close]

BLAST of Lag0038417 vs. ExPASy TrEMBL
Match: A0A2N9ESZ1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS9799 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 8.8e-46
Identity = 127/422 (30.09%), Postives = 194/422 (45.97%), Query Frame = 0


Query: 8    PIYGSNWLPNEFSLQIQSAP-VLSPASTVSELFTAS-GGWDVALLRTIFNGADCEAILRI 67
            PI+ S WL  E   +I + P    P S+V+EL   +   WDV  +RTIF   D +AIL+I
Sbjct: 1273 PIWNSKWLAEEGHRRIITPPSCYHPNSSVAELIQGTPPEWDVEKIRTIFLPYDADAILQI 1332

Query: 68   PLRKGSGEDRLIWHFEKH--FSVKSGYRLAHTLATQDRPGSSNSERVRIWWSDLWRLNVP 127
            PL   S  D+LIWH  K+  ++V+SGY +         PGSS   +    W  +W L VP
Sbjct: 1333 PLSSRSPPDQLIWHATKNGKYTVRSGYHILLQEEQISNPGSSRLWKSDPLWKTIWSLRVP 1392

Query: 128  NKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSN 187
             K R FLWR CHD LP+K+ L++R + VSP C  C    E+CLH  W CP +  +W   +
Sbjct: 1393 AKVRSFLWRACHDSLPSKLGLMRRQVGVSPWCDSCGSGIEDCLHALWNCPALTPIWSSQH 1452

Query: 188  FALFHQSFSHFRFEEI---IGAMRDKLTGLDFELVAY------SSDYLSAFHVGGGRCGA 247
              +  Q   H  F E+   +G +   L    F +  +      + D L        + G 
Sbjct: 1453 NLVDLQKIVHNSFAELVCNVGKLNHDLILETFAVTCWLIWHKRNQDRLHLPSAEYSQIGP 1512

Query: 248  RDSSWAQ-----------SREREERDVWRPPPNRELKLNIDASVRPNTGEAGGGCVLRGA 307
            R  +  Q           ++  + R +WRPP   + K+N D ++  +  + G G V+R  
Sbjct: 1513 RAQALIQEFSSLHAQERRAKSPQPRILWRPPAMHQYKVNFDGAIFKDAKKGGIGVVVRDK 1572

Query: 308  EG--------------------------------ELGFVDFVVETDSLRLVKILNGELHD 367
             G                                E+G +D + E DS  +++ L+ +   
Sbjct: 1573 AGLVIATLSQRVMTSPSPELIEARAARRAIQFAREIGLLDVIFEGDSEIIIRDLSSKEIV 1632

Query: 368  VSEVGLLMDDIRRILSPWVNSKVLFTPRQGNKVAHVLARLAFSYVD-RVWLEEWPSEVSD 373
             +  GL+++D + +L+ +       T R GN VAH LAR A    D  VW+E+ P ++  
Sbjct: 1633 HNSYGLILEDSKVLLNHFQRYAFTHTRRSGNSVAHALARRALDIPDYSVWMEDAPPDILP 1692

[Close]

BLAST of Lag0038417 vs. ExPASy TrEMBL
Match: A0A5E4FZN9 (PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 4.1e-43
Identity = 132/433 (30.48%), Postives = 193/433 (44.57%), Query Frame = 0


Query: 3    NQLATPIYGSNWLPNEFSLQIQSAPVLSPASTVSELFTASGGWDVALLRTIFNGADCEAI 62
            N ++  +Y   WLP     +I S P L  ++ V +LFT+SG W+V LL+ IF   + +A 
Sbjct: 860  NGVSIQVYTDKWLPAPSFFKIMSPPQLPLSTLVCDLFTSSGQWNVPLLKDIFWDQEVDAK 919

Query: 63   LRIPLRKGSGEDRLIWHFEKH--FSVKSGYRLAHTLATQDRPGSSNSERVRI---WWSDL 122
            L+IPL   +G D LIWH+E++  +SVKSGYRLA     +D+     S RV +   +W  +
Sbjct: 920  LQIPLASLAGHDCLIWHYERNGMYSVKSGYRLA--CLEKDKMSGEPSVRVDLNSKFWKKI 979

Query: 123  WRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKS 182
            W L +PNK +FFLWR   D LP    L  R +  +P+C  C   AE  LH  W C   K 
Sbjct: 980  WALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPNCHRKAESVLHAVWLCETAKE 1039

Query: 183  MWLGSNFALFHQSFSHFRFEEIIGAMRDKLTGLDFELVAY-----------------SSD 242
            +W  S +    + +    F E+  A++   +G +  L AY                 S  
Sbjct: 1040 VWRNSAWGNVCEEWRVNSFRELWHALQLSSSGEEQGLFAYLCWGLWNRRNSFIFEGKSET 1099

Query: 243  YLSAFH----VGGGRCGARDSSWA----QSREREERDVWRPPPNRELKLNIDASVRPNTG 302
                 H    +      A + S      QS  +     WRPPP    K+N+D +V+    
Sbjct: 1100 ATQLLHRMTKLAQEFSNANNLSHTIHGRQSSPQAPLHGWRPPPAGIYKINVDGAVKSGDS 1159

Query: 303  EAGGGCVLRGAEGE--------------------------------LGFVDFVVETDSLR 362
              G G V+R A GE                                +GF   V+E D+  
Sbjct: 1160 VRGVGVVVRNANGEFMAACVRRIQASYGARQTELMATIEGLRFAIDMGFTAAVLEMDAQD 1219

Query: 363  LVKILNGELHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQGNKVAHVLARLAFSYVDRV- 373
             +  +          GLL++++  +L  +      +TPR GNKVAH LA+ AF   + V 
Sbjct: 1220 CINSILSTEECNGIDGLLIEEVNYLLHNFRAVVCQWTPRSGNKVAHTLAQFAFHCNEFVT 1279

[Close]

BLAST of Lag0038417 vs. ExPASy TrEMBL
Match: A0A2N9FT78 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21808 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 4.1e-43
Identity = 122/411 (29.68%), Postives = 188/411 (45.74%), Query Frame = 0


Query: 8   PIYGSNWLPNEFSLQIQS-APVLSPASTVSELFTAS-GGWDVALLRTIFNGADCEAILRI 67
           PI  S WLP E   ++ S  P     + V++L   S   WD   +R  F   D +AIL+I
Sbjct: 61  PIKDSKWLPEEGHRKVISPVPDFPHDAKVADLIKGSPPEWDTEKIRGSFLPYDADAILQI 120

Query: 68  PLRKGSGEDRLIWHFEKH--FSVKSGYRLAHTLATQDRPGSSNSERVRIWWSDLWRLNVP 127
           PL   S  D+LIWH  K+  FSV+SGY L         PGSS    +   W  +W + VP
Sbjct: 121 PLSYRSPPDKLIWHAIKNGKFSVRSGYHLLLQEEQNSNPGSSQDREIDPLWKVIWSMRVP 180

Query: 128 NKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSN 187
            K R F+WR CH+ LPTK+ L++R +  SP C  C    E+CLH  W+CP++ + W   +
Sbjct: 181 AKIRSFIWRACHESLPTKMGLMRRKVMDSPWCASCGTGTEDCLHALWSCPLLNTTWSSQH 240

Query: 188 FALFHQSFSHFRFEEI---IGAMRDKLTGLDFELVA---YSSDYLSAFHV-GGGRCGARD 247
                Q  +H  F E+   +G +   L   +F ++    +     +  H+   G   A++
Sbjct: 241 KFSDLQKVTHSSFTELVRQVGMLNQDLILEEFAMICWLLWHKRNKNRLHLPSEGEINAKE 300

Query: 248 SSWAQSREREERDVWRPPPNRELKLNIDASVRPNTGEAGGGCVLRGAEG----------- 307
            S    +       WRPP + + K+N D ++       G G V+R   G           
Sbjct: 301 RSVKLPKPSTS---WRPPISHQYKVNFDGAIFQEAKMGGIGVVVRDQAGMVIATLSQRVI 360

Query: 308 ---------------------ELGFVDFVVETDSLRLVKILNGE--LHDVSEVGLLMDDI 367
                                E+G +D   E DS  +++ L+ +  +H+ S  GL+++D 
Sbjct: 361 TSPSAELIEARAARRAIQFAMEIGILDVQFEGDSETIIRELSNQEVMHNAS--GLIIEDA 420

Query: 368 RRILSPWVNSKVLFTPRQGNKVAHVLARLAFSYVD-RVWLEEWPSEVSDVL 373
           + +L  +       T R GN VAH LAR A    +  VW+E+ P ++  +L
Sbjct: 421 KALLHHFQRYMFTHTRRSGNSVAHALARRALDIPNFSVWMEDAPPDIIPIL 466

[Close]

BLAST of Lag0038417 vs. ExPASy TrEMBL
Match: M5VU98 (Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa022115mg PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.5e-42
Identity = 119/404 (29.46%), Postives = 180/404 (44.55%), Query Frame = 0


Query: 9    IYGSNWLPNEFSLQIQSAPVLSPAST-VSELFTASGG--WDVALLRTIFNGADCEAILRI 68
            I+G  W+P   +  + ++P+    +T VSEL    G   WD+  L  +F   D   I+RI
Sbjct: 1352 IWGDKWVPRPATFAVITSPLDGMENTKVSELICNEGSPQWDLQKLNNLFLPVDVVDIVRI 1411

Query: 69   PLRKGSGEDRLIWHFEKH--FSVKSGYRLA--HTLATQDRPGSSNSERVRIWWSDLWRLN 128
            PL   +  DR++W+++KH  F+VKS YR+A   T   +D   SSNS+   + W  +W   
Sbjct: 1412 PLSIRAPPDRIVWNYDKHGLFTVKSAYRVALRVTSGDEDESSSSNSD-TGMLWRHIWNAT 1471

Query: 129  VPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLG 188
            VP K + F WR+ HD LPTK NL+K+G+ +  +C+ C D  E  LH+   CP   + W  
Sbjct: 1472 VPTKLKIFAWRVAHDILPTKANLIKKGVDMQDMCMFCGDITESALHVLAMCPFAVATW-- 1531

Query: 189  SNFALFHQSFSHFRFEEIIGAMRDKLTGLDFELVAYSSDYLSAFHVGGGRCGARDSSWAQ 248
             N +L  +           G  R        E+V ++  Y+  F        A D+    
Sbjct: 1532 -NISLLTRHAHQ-------GVQRS-----PHEVVGFAQQYVHEF------ITANDTPSKV 1591

Query: 249  SREREERDVWRPPPNRELKLNIDASVRPNTGEAGGGCVLRGAEG---------------- 308
            +    +   W  PP+  LK N D +  P +G    G V R A+G                
Sbjct: 1592 TDRVRDPVRWAAPPSGRLKFNFDGAFDPTSGRGAVGVVARDADGGFVAAVAKSVGEVLSA 1651

Query: 309  ----------------ELGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPW 368
                             LG    + E DS  +V  +     D S +G +++D++ +   +
Sbjct: 1652 EHAEILAAREGVALALSLGTASPIFEGDSAVVVSAIKRAGQDYSNIGTIVEDVKHLQQQF 1711

Query: 369  VNSKVLFTPRQGNKVAHVLARLAFSYVDR-VWLEEWPSEVSDVL 373
             +S   FTPR+ N VAH LAR     VD  +W E  P  + D L
Sbjct: 1712 PSSLFQFTPREANGVAHRLARFGLHNVDNFIWFEVPPDLIQDAL 1733

[Close]

BLAST of Lag0038417 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 87.8 bits (216), Expect = 2.9e-17
Identity = 99/427 (23.19%), Postives = 169/427 (39.58%), Query Frame = 0


Query: 9   IYGSNWL---PNEFSLQIQSAPVLSPAST-----VSELFTASG-GWDVALLRTIFNGADC 68
           I+   WL   P   +L++Q  P    AS      VS+L   SG  W   ++  +F   + 
Sbjct: 137 IWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGREWRKDVIEMLF--PEV 196

Query: 69  EAILRIPLRKGSGE--DRLIWHFEK--HFSVKSGY-RLAHTLATQDRPGSSNSERVRIWW 128
           E  L   LR G     D   W +     ++VKSGY  L   +  +  P   +   +   +
Sbjct: 197 ERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIY 256

Query: 129 SDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPV 188
             +W+     K + FLW+   + LP    L  R L+    C+ C    E   HL + C  
Sbjct: 257 QKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTF 316

Query: 189 VKSMW--------LGSNFA---------LFHQSFSHFRFEEI----------IGAMRDKL 248
            +  W        LG  +A         +F+    + ++E+           +   R++L
Sbjct: 317 ARLTWAISSIPIPLGGEWADSIYVNLYWVFNLGNGNPQWEKASQLVPWLLWRLWKNRNEL 376

Query: 249 T--GLDF---ELVAYSSDYLSAFHVGGGRCGARDSSWAQSREREERDVWRPPPNRELKLN 308
              G +F   E++  + D L  + +   R  A          R     WRPPP++ +K N
Sbjct: 377 VFRGREFNAQEVLRRAEDDLEEWRI---RTEAESCGTKPQVNRSSCGRWRPPPHQWVKCN 436

Query: 309 IDASVRPNTGEAGGGCVLRGAEGELGFVD------------------------------- 358
            DA+   +    G G VLR  +GE+ ++                                
Sbjct: 437 TDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAMRWAVLSLSRFQYN 496

[Close]

BLAST of Lag0038417 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 2.6e-10
Identity = 56/250 (22.40%), Postives = 90/250 (36.00%), Query Frame = 0


Query: 86  VKSGYRLA------HTLATQDRPGSSNSERVRIWWSDLWRLNVPNKHRFFLWRLCHDCLP 145
           ++SGY +A         A Q  PGS+  ++       +W+L+V  K + FLWR     L 
Sbjct: 6   LRSGYWVATHEDLLEEEAIQPPPGSTEVKQA------IWKLHVAPKIKHFLWRCVTGALA 65

Query: 146 TKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALFHQSFSHFRFEEI 205
           T   L  R +   P+C  C  + E   H+ + CP  +S+W  +N  + +Q      FE+ 
Sbjct: 66  TNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPYTQSVWRSANIIIGNQWGPPSSFEDN 125

Query: 206 IGAM-----RDKLTGLD-------------------FELVAYSSDYLSAFHVGGGRCGAR 265
           +  +           LD                   F+    S DY         R G +
Sbjct: 126 LNRLIQLSKTQTTNSLDRFLPFWIMWRLWKSRNVFLFQQKCQSPDY-------EARKGIQ 185

Query: 266 DSS-WAQSRE-----------------REERDVWRPPPNRELKLNIDASVRPNTGEAGGG 288
           D++ W  + E                 R +   W PPP   +K N D+     +     G
Sbjct: 186 DATEWLNANETTENTNVHVATNPIQTSRRDSSQWNPPPEGWVKCNFDSGYTQGSPYTRSG 242

[Close]

BLAST of Lag0038417 vs. TAIR 10
Match: AT1G43730.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 53.1 bits (126), Expect = 8.0e-07
Identity = 22/67 (32.84%), Postives = 35/67 (52.24%), Query Frame = 0


Query: 113 WWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTC 172
           W+  +W  N   KH F  W +  + L T+  L   GL++  +C+LC+   E   HLF+ C
Sbjct: 151 WYKAVWFKNHVPKHAFICWVVAWNRLHTRDRLRSWGLSIPAVCLLCNSHDESRAHLFFEC 210

Query: 173 PVVKSMW 180
           P   ++W
Sbjct: 211 PFCGAVW 217

[Close]

BLAST of Lag0038417 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 51.2 bits (121), Expect = 3.0e-06
Identity = 19/61 (31.15%), Postives = 31/61 (50.82%), Query Frame = 0


Query: 113 WWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTC 172
           W  D+W L +  K +  +W+  ++ LP    LL R +++ P C  C  D E   H+ + C
Sbjct: 5   WIGDIWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRC-RDFETITHILFNC 64

Query: 173 P 174
           P
Sbjct: 65  P 64

[Close]

BLAST of Lag0038417 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 1.5e-05
Identity = 22/66 (33.33%), Postives = 32/66 (48.48%), Query Frame = 0


Query: 117 LWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVK 176
           +W+L    K + FLW+L    L T  NL +R +   P C  C  + E   HLF+ C   +
Sbjct: 18  IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77

Query: 177 SMWLGS 183
            +W  S
Sbjct: 78  QVWRAS 83

The following BLAST results are available for this feature:

BLAST of Lag0038417 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150918.1	5.8e-52	31.54	uncharacterized protein LOC111018954 [Momordica charantia]	[more]
VVA32947.1	8.5e-43	30.48	PREDICTED: retrotransposon [Prunus dulcis]	[more]
ONI01138.1	2.1e-41	31.87	hypothetical protein PRUPE_6G123900 [Prunus persica]	[more]
XP_024037590.1	1.4e-40	28.67	uncharacterized protein LOC112097210 [Citrus clementina]	[more]
XP_042958055.1	1.7e-38	28.27	uncharacterized protein LOC122293570 [Carya illinoinensis]	[more]

BLAST of Lag0038417 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0038417 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DAR4	2.8e-52	31.54	uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A2N9ESZ1	8.8e-46	30.09	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS9799 PE=4 SV=1	[more]
A0A5E4FZN9	4.1e-43	30.48	PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1	[more]
A0A2N9FT78	4.1e-43	29.68	RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21808 ...	[more]
M5VU98	3.5e-42	29.46	Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRU...	[more]

BLAST of Lag0038417 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29090.1	2.9e-17	23.19	Ribonuclease H-like superfamily protein	[more]
AT2G02650.1	2.6e-10	22.40	Ribonuclease H-like superfamily protein	[more]
AT1G43730.1	8.0e-07	32.84	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT3G26855.1	3.0e-06	31.15	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT3G25270.1	1.5e-05	33.33	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 287..352 e-value: 1.7E-8 score: 34.3
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 84..179 e-value: 3.1E-21 score: 75.8
None	No IPR available	PANTHER	PTHR46736:SF6	SUBFAMILY NOT NAMED	coord: 49..286
None	No IPR available	PANTHER	PTHR46736	FAMILY NOT NAMED	coord: 49..286
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 261..350 e-value: 6.16931E-13 score: 63.4872
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 259..355

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0038417.1	Lag0038417.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity