Lag0038409 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0038409
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr2: 16862966 .. 16864225 (+)
RNA-Seq Expression	Lag0038409
Synteny	Lag0038409

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAATCATGGGGTGCGGCCTAACGAGTTCACGTTTGCGATGGTTTTATCAGCTTGTTCTAGGTTGGGGGATGTTATCTATGGTAGACAAGTCCACTGTGGTGTTTTTAAGATGGGTTTTGGGTTTCGTTCTTTTTGTCAAGGTGGGCTAATTGATATGTATGCCAAATGCCGTAATCTAAGAGATGCTCACTTGGTGTTTGATGGGGCACTTAATTTAGATGCTGTTTCATGGACGACCTTGATTGCAGGGTATGTTCAAGATGGCTTACCTGAGGAGGTAATCAAGGTGTTCGATAGAATGCGGAGAGTTGGCCATGTATCTGATCAGGTAGCGCTTGTGACTGTTATAAATGCTTATGTGGCCCTAGATAGGCTTGCTGATGCTTGTGAGTTGTTTGCCCGGATGCCAAACCCTAATATTGTAGCTTGGAATGTGATGATTTCAGGGCATGCTAAGAGGGGATTTTCAGAGGAAGCTATTTCATTTTTTCTGAAATTAAAGAGAGTTGGCTTAAAAGCCACTAGATCTACTATAGGAAGTGTTTTAAGTGCAATTGCCAGTTTATCAATGCTGAATTACGGCTTAATGGTTCATGCTCAGGTGATTAAGGAAGGGCTGAATGCTAATGTGTATGTAGGAAGTGCATTGGTGAACATGTATGCCAAATGTGAAAAAATGGATGCTGCAAAAGAAGTGTTCAATACTTTAGATGAGAGAAATATTGTCTTGTGGAATGCTATGCTTGGAGGTTTTTCACAGAACGGGCTTGCCCGTGAAGTGATGGAATTTTTCTCATGTATGAAACAATTTGGACCACAGCCTGATGAGTTTACCTACACTAGTATTTTCAGTGCACGTGCCTCCTTGCAGTATCTTGATTTCGGTCGTCAACTTCACACTGTTATGATAAAGAAAAAATTTGCATCTAATATATTTGTTTCAAATGCATTGGTAGACATGTATGCTAAATTAGGGGCTTTAAAAGAAGCAAGAAAACAATTTGAGTCGATGAAAGTTCATGACAATGTTTCATGGAATGCAATAATTGTGGGGTATGTGCAGGAAGAGTATAATGATGAGGCGTTTTTCATGTTTCGAAGAATGGTTTCAAATGGGGTTGTTCCAGATGAGGTGTTTTTGGCCAACATAGTGAGTGCTTGTGCAAAGTTCAGAAGTTTAAACGAGGACAACAATGTCACTGTCTCTCAGTTAAAGTTGGTTTGGATACAAGCATTTGTTCTGGAAGTTCCCTAA

mRNA sequence

ATGTGGAATCATGGGGTGCGGCCTAACGAGTTCACGTTTGCGATGGTTTTATCAGCTTGTTCTAGGTTGGGGGATGTTATCTATGGTAGACAAGTCCACTGTGGTGTTTTTAAGATGGGTTTTGGGTTTCGTTCTTTTTGTCAAGGTGGGCTAATTGATATGTATGCCAAATGCCGTAATCTAAGAGATGCTCACTTGGTGTTTGATGGGGCACTTAATTTAGATGCTGTTTCATGGACGACCTTGATTGCAGGGTATGTTCAAGATGGCTTACCTGAGGAGGTAATCAAGGTGTTCGATAGAATGCGGAGAGTTGGCCATGTATCTGATCAGGTAGCGCTTGTGACTGTTATAAATGCTTATGTGGCCCTAGATAGGCTTGCTGATGCTTGTGAGTTGTTTGCCCGGATGCCAAACCCTAATATTGTAGCTTGGAATGTGATGATTTCAGGGCATGCTAAGAGGGGATTTTCAGAGGAAGCTATTTCATTTTTTCTGAAATTAAAGAGAGTTGGCTTAAAAGCCACTAGATCTACTATAGGAAGTGTTTTAAGTGCAATTGCCAGTTTATCAATGCTGAATTACGGCTTAATGGTTCATGCTCAGGTGATTAAGGAAGGGCTGAATGCTAATGTGTATGTAGGAAGTGCATTGGTGAACATGTATGCCAAATGTGAAAAAATGGATGCTGCAAAAGAAGTGTTCAATACTTTAGATGAGAGAAATATTGTCTTGTGGAATGCTATGCTTGGAGGTTTTTCACAGAACGGGCTTGCCCGTGAAGTGATGGAATTTTTCTCATGTATGAAACAATTTGGACCACAGCCTGATGAGTTTACCTACACTAGTATTTTCAGTGCACGTGCCTCCTTGCAGTATCTTGATTTCGGTCGTCAACTTCACACTGTTATGATAAAGAAAAAATTTGCATCTAATATATTTGTTTCAAATGCATTGGTAGACATGTATGCTAAATTAGGGGCTTTAAAAGAAGCAAGAAAACAATTTGAGTCGATGAAAGTTCATGACAATGTTTCATGGAATGCAATAATTGTGGGGTATGTGCAGGAAGAGTATAATGATGAGGCGTTTTTCATGTTTCGAAGAATGGTTTCAAATGGGGTTGTTCCAGATGAGGTGTTTTTGGCCAACATAGTGAGTGCTTGTGCAAAGTTCAGAAGTTTAAACGAGGACAACAATGTCACTGTCTCTCAGTTAAAGTTGGTTTGGATACAAGCATTTGTTCTGGAAGTTCCCTAA

Coding sequence (CDS)

ATGTGGAATCATGGGGTGCGGCCTAACGAGTTCACGTTTGCGATGGTTTTATCAGCTTGTTCTAGGTTGGGGGATGTTATCTATGGTAGACAAGTCCACTGTGGTGTTTTTAAGATGGGTTTTGGGTTTCGTTCTTTTTGTCAAGGTGGGCTAATTGATATGTATGCCAAATGCCGTAATCTAAGAGATGCTCACTTGGTGTTTGATGGGGCACTTAATTTAGATGCTGTTTCATGGACGACCTTGATTGCAGGGTATGTTCAAGATGGCTTACCTGAGGAGGTAATCAAGGTGTTCGATAGAATGCGGAGAGTTGGCCATGTATCTGATCAGGTAGCGCTTGTGACTGTTATAAATGCTTATGTGGCCCTAGATAGGCTTGCTGATGCTTGTGAGTTGTTTGCCCGGATGCCAAACCCTAATATTGTAGCTTGGAATGTGATGATTTCAGGGCATGCTAAGAGGGGATTTTCAGAGGAAGCTATTTCATTTTTTCTGAAATTAAAGAGAGTTGGCTTAAAAGCCACTAGATCTACTATAGGAAGTGTTTTAAGTGCAATTGCCAGTTTATCAATGCTGAATTACGGCTTAATGGTTCATGCTCAGGTGATTAAGGAAGGGCTGAATGCTAATGTGTATGTAGGAAGTGCATTGGTGAACATGTATGCCAAATGTGAAAAAATGGATGCTGCAAAAGAAGTGTTCAATACTTTAGATGAGAGAAATATTGTCTTGTGGAATGCTATGCTTGGAGGTTTTTCACAGAACGGGCTTGCCCGTGAAGTGATGGAATTTTTCTCATGTATGAAACAATTTGGACCACAGCCTGATGAGTTTACCTACACTAGTATTTTCAGTGCACGTGCCTCCTTGCAGTATCTTGATTTCGGTCGTCAACTTCACACTGTTATGATAAAGAAAAAATTTGCATCTAATATATTTGTTTCAAATGCATTGGTAGACATGTATGCTAAATTAGGGGCTTTAAAAGAAGCAAGAAAACAATTTGAGTCGATGAAAGTTCATGACAATGTTTCATGGAATGCAATAATTGTGGGGTATGTGCAGGAAGAGTATAATGATGAGGCGTTTTTCATGTTTCGAAGAATGGTTTCAAATGGGGTTGTTCCAGATGAGGTGTTTTTGGCCAACATAGTGAGTGCTTGTGCAAAGTTCAGAAGTTTAAACGAGGACAACAATGTCACTGTCTCTCAGTTAAAGTTGGTTTGGATACAAGCATTTGTTCTGGAAGTTCCCTAA

Protein sequence

MWNHGVRPNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDAHLVFDGALNLDAVSWTTLIAGYVQDGLPEEVIKVFDRMRRVGHVSDQVALVTVINAYVALDRLADACELFARMPNPNIVAWNVMISGHAKRGFSEEAISFFLKLKRVGLKATRSTIGSVLSAIASLSMLNYGLMVHAQVIKEGLNANVYVGSALVNMYAKCEKMDAAKEVFNTLDERNIVLWNAMLGGFSQNGLAREVMEFFSCMKQFGPQPDEFTYTSIFSARASLQYLDFGRQLHTVMIKKKFASNIFVSNALVDMYAKLGALKEARKQFESMKVHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVVPDEVFLANIVSACAKFRSLNEDNNVTVSQLKLVWIQAFVLEVP

Homology

[Close]

BLAST of Lag0038409 vs. NCBI nr
Match: ADN34182.1 (pentatricopeptide repeat-containing protein [Cucumis melo subsp. melo])

HSP 1 Score: 685.3 bits (1767), Expect = 3.4e-193
Identity = 334/397 (84.13%), Postives = 364/397 (91.69%), Query Frame = 0


Query: 1   MWNHGVRPNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 60
           MWNHGVRPNEFTFAMVLSACS L D+ YG+QVHCGVFKMGFGFRSFCQGGLIDMYAKCRN
Sbjct: 133 MWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 192

Query: 61  LRDAHLVFDGALNLDAVSWTTLIAGYVQDGLPEEVIKVFDRMRRVGHVSDQVALVTVINA 120
           LRDA LVFDGALNLD VSWTTLIAGYV+DG P E +KVFD+M+RVGHV DQ+ALVTVINA
Sbjct: 193 LRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINA 252

Query: 121 YVALDRLADACELFARMPNPNIVAWNVMISGHAKRGFSEEAISFFLKLKRVGLKATRSTI 180
           YVAL RLADA +LF ++PNPN+VAWNVMISGHAKRGF+EEAISFFL+LK+ GLKATRS++
Sbjct: 253 YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSL 312

Query: 181 GSVLSAIASLSMLNYGLMVHAQVIKEGLNANVYVGSALVNMYAKCEKMDAAKEVFNTLDE 240
           GSVLSAIASLSMLNYG MVHAQ IKEGL+ NVYVGSALVNMYAKC KMDAAK+VFN+L E
Sbjct: 313 GSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372

Query: 241 RNIVLWNAMLGGFSQNGLAREVMEFFSCMKQFGPQPDEFTYTSIFSARASLQYLDFGRQL 300
           RNIVLWNAMLGGF+QNGLA+EVMEFFS MK+ GPQPDEFT+TSIFSA ASL YLDFG QL
Sbjct: 373 RNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQL 432

Query: 301 HTVMIKKKFASNIFVSNALVDMYAKLGALKEARKQFESMKVHDNVSWNAIIVGYVQEEYN 360
           HTVMIK KF SN+FV+NALVDMYAK GALKEARKQFE MK+HDNVSWNAIIVGYVQEEYN
Sbjct: 433 HTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYN 492

Query: 361 DEAFFMFRRMVSNGVVPDEVFLANIVSACAKFRSLNE 398
           DEAFFMFRRMVSNGV+PDEV LA+IVSACA  +   +
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQ 529

[Close]

BLAST of Lag0038409 vs. NCBI nr
Match: TYK19689.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 685.3 bits (1767), Expect = 3.4e-193
Identity = 334/397 (84.13%), Postives = 364/397 (91.69%), Query Frame = 0


Query: 1   MWNHGVRPNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 60
           MWNHGVRPNEFTFAMVLSACS L D+ YG+QVHCGVFKMGFGFRSFCQGGLIDMYAKCRN
Sbjct: 133 MWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 192

Query: 61  LRDAHLVFDGALNLDAVSWTTLIAGYVQDGLPEEVIKVFDRMRRVGHVSDQVALVTVINA 120
           LRDA LVFDGALNLD VSWTTLIAGYV+DG P E +KVFD+M+RVGHV DQ+ALVTVINA
Sbjct: 193 LRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINA 252

Query: 121 YVALDRLADACELFARMPNPNIVAWNVMISGHAKRGFSEEAISFFLKLKRVGLKATRSTI 180
           YVAL RLADA +LF ++PNPN+VAWNVMISGHAKRGF+EEAISFFL+LK+ GLKATRS++
Sbjct: 253 YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSL 312

Query: 181 GSVLSAIASLSMLNYGLMVHAQVIKEGLNANVYVGSALVNMYAKCEKMDAAKEVFNTLDE 240
           GSVLSAIASLSMLNYG MVHAQ IKEGL+ NVYVGSALVNMYAKC KMDAAK+VFN+L E
Sbjct: 313 GSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372

Query: 241 RNIVLWNAMLGGFSQNGLAREVMEFFSCMKQFGPQPDEFTYTSIFSARASLQYLDFGRQL 300
           RNIVLWNAMLGGF+QNGLA+EVMEFFS MK+ GPQPDEFT+TSIFSA ASL YLDFG QL
Sbjct: 373 RNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQL 432

Query: 301 HTVMIKKKFASNIFVSNALVDMYAKLGALKEARKQFESMKVHDNVSWNAIIVGYVQEEYN 360
           HTVMIK KF SN+FV+NALVDMYAK GALKEARKQFE MK+HDNVSWNAIIVGYVQEEYN
Sbjct: 433 HTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYN 492

Query: 361 DEAFFMFRRMVSNGVVPDEVFLANIVSACAKFRSLNE 398
           DEAFFMFRRMVSNGV+PDEV LA+IVSACA  +   +
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQ 529

[Close]

BLAST of Lag0038409 vs. NCBI nr
Match: KAA0041567.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 685.3 bits (1767), Expect = 3.4e-193
Identity = 334/397 (84.13%), Postives = 364/397 (91.69%), Query Frame = 0


Query: 1   MWNHGVRPNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 60
           MWNHGVRPNEFTFAMVLSACS L D+ YG+QVHCGVFKMGFGFRSFCQGGLIDMYAKCRN
Sbjct: 133 MWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 192

Query: 61  LRDAHLVFDGALNLDAVSWTTLIAGYVQDGLPEEVIKVFDRMRRVGHVSDQVALVTVINA 120
           LRDA LVFDGALNLD VSWTTLIAGYV+DG P E +KVFD+M+RVGHV DQ+ALVTVINA
Sbjct: 193 LRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINA 252

Query: 121 YVALDRLADACELFARMPNPNIVAWNVMISGHAKRGFSEEAISFFLKLKRVGLKATRSTI 180
           YVAL RLADA +LF ++PNPN+VAWNVMISGHAKRGF+EEAISFFL+LK+ GLKATRS++
Sbjct: 253 YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSL 312

Query: 181 GSVLSAIASLSMLNYGLMVHAQVIKEGLNANVYVGSALVNMYAKCEKMDAAKEVFNTLDE 240
           GSVLSAIASLSMLNYG MVHAQ IKEGL+ NVYVGSALVNMYAKC KMDAAK+VFN+L E
Sbjct: 313 GSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372

Query: 241 RNIVLWNAMLGGFSQNGLAREVMEFFSCMKQFGPQPDEFTYTSIFSARASLQYLDFGRQL 300
           RNIVLWNAMLGGF+QNGLA+EVMEFFS MK+ GPQPDEFT+TSIFSA ASL YLDFG QL
Sbjct: 373 RNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQL 432

Query: 301 HTVMIKKKFASNIFVSNALVDMYAKLGALKEARKQFESMKVHDNVSWNAIIVGYVQEEYN 360
           HTVMIK KF SN+FV+NALVDMYAK GALKEARKQFE MK+HDNVSWNAIIVGYVQEEYN
Sbjct: 433 HTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYN 492

Query: 361 DEAFFMFRRMVSNGVVPDEVFLANIVSACAKFRSLNE 398
           DEAFFMFRRMVSNGV+PDEV LA+IVSACA  +   +
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQ 529

[Close]

BLAST of Lag0038409 vs. NCBI nr
Match: XP_008466537.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g09040, mitochondrial [Cucumis melo])

HSP 1 Score: 685.3 bits (1767), Expect = 3.4e-193
Identity = 334/397 (84.13%), Postives = 364/397 (91.69%), Query Frame = 0


Query: 1   MWNHGVRPNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 60
           MWNHGVRPNEFTFAMVLSACS L D+ YG+QVHCGVFKMGFGFRSFCQGGLIDMYAKCRN
Sbjct: 133 MWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 192

Query: 61  LRDAHLVFDGALNLDAVSWTTLIAGYVQDGLPEEVIKVFDRMRRVGHVSDQVALVTVINA 120
           LRDA LVFDGALNLD VSWTTLIAGYV+DG P E +KVFD+M+RVGHV DQ+ALVTVINA
Sbjct: 193 LRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINA 252

Query: 121 YVALDRLADACELFARMPNPNIVAWNVMISGHAKRGFSEEAISFFLKLKRVGLKATRSTI 180
           YVAL RLADA +LF ++PNPN+VAWNVMISGHAKRGF+EEAISFFL+LK+ GLKATRS++
Sbjct: 253 YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSL 312

Query: 181 GSVLSAIASLSMLNYGLMVHAQVIKEGLNANVYVGSALVNMYAKCEKMDAAKEVFNTLDE 240
           GSVLSAIASLSMLNYG MVHAQ IKEGL+ NVYVGSALVNMYAKC KMDAAK+VFN+L E
Sbjct: 313 GSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372

Query: 241 RNIVLWNAMLGGFSQNGLAREVMEFFSCMKQFGPQPDEFTYTSIFSARASLQYLDFGRQL 300
           RNIVLWNAMLGGF+QNGLA+EVMEFFS MK+ GPQPDEFT+TSIFSA ASL YLDFG QL
Sbjct: 373 RNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQL 432

Query: 301 HTVMIKKKFASNIFVSNALVDMYAKLGALKEARKQFESMKVHDNVSWNAIIVGYVQEEYN 360
           HTVMIK KF SN+FV+NALVDMYAK GALKEARKQFE MK+HDNVSWNAIIVGYVQEEYN
Sbjct: 433 HTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYN 492

Query: 361 DEAFFMFRRMVSNGVVPDEVFLANIVSACAKFRSLNE 398
           DEAFFMFRRMVSNGV+PDEV LA+IVSACA  +   +
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQ 529

[Close]

BLAST of Lag0038409 vs. NCBI nr
Match: XP_022974928.1 (pentatricopeptide repeat-containing protein At3g09040, mitochondrial [Cucurbita maxima])

HSP 1 Score: 677.2 bits (1746), Expect = 9.3e-191
Identity = 335/395 (84.81%), Postives = 359/395 (90.89%), Query Frame = 0


Query: 1   MWNHGVRPNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 60
           MWN GVRPNEFTFAMVLSACSRL DV YGRQVHCGVFKMGFGF SFCQGGLIDMYAKC +
Sbjct: 155 MWNDGVRPNEFTFAMVLSACSRLLDVNYGRQVHCGVFKMGFGFSSFCQGGLIDMYAKCHD 214

Query: 61  LRDAHLVFDGALNLDAVSWTTLIAGYVQDGLPEEVIKVFDRMRRVGHVSDQVALVTVINA 120
           LRDA LVFDGALN+D VSWT LIAGYVQDGLPEE +KVFDRM+ VG V DQ+ALVTVINA
Sbjct: 215 LRDARLVFDGALNMDTVSWTALIAGYVQDGLPEEAVKVFDRMQTVGLVPDQIALVTVINA 274

Query: 121 YVALDRLADACELFARMPNPNIVAWNVMISGHAKRGFSEEAISFFLKLKRVGLKATRSTI 180
           YVALDRL DA +LFA++PNPNIVAWNVMISGHAKRGF+ EAISFFL+LKR GLKATRSTI
Sbjct: 275 YVALDRLGDARKLFAQLPNPNIVAWNVMISGHAKRGFALEAISFFLELKRTGLKATRSTI 334

Query: 181 GSVLSAIASLSMLNYGLMVHAQVIKEGLNANVYVGSALVNMYAKCEKMDAAKEVFNTLDE 240
           GSVLSAIASLSMLNYGLMVHAQVIKEGL+ NVYVGSALVNMYAKCEKMDAA EVFN+L+E
Sbjct: 335 GSVLSAIASLSMLNYGLMVHAQVIKEGLHDNVYVGSALVNMYAKCEKMDAATEVFNSLEE 394

Query: 241 RNIVLWNAMLGGFSQNGLAREVMEFFSCMKQFGPQPDEFTYTSIFSARASLQYLDFGRQL 300
           RNIVLWNAML GF+QNGLA EVM+ FS MK++GPQPDEFT+TSIFSA ASLQYLDFGRQL
Sbjct: 395 RNIVLWNAMLAGFAQNGLAHEVMDLFSYMKRYGPQPDEFTFTSIFSACASLQYLDFGRQL 454

Query: 301 HTVMIKKKFASNIFVSNALVDMYAKLGALKEARKQFESMKVHDNVSWNAIIVGYVQEEYN 360
           H VMIK KF SN+FV+NALVDMYAK GALK+ARKQFE MK+HDNVSWNAIIVGYVQEEYN
Sbjct: 455 HNVMIKNKFVSNLFVANALVDMYAKSGALKDARKQFELMKIHDNVSWNAIIVGYVQEEYN 514

Query: 361 DEAFFMFRRMVSNGVVPDEVFLANIVSACAKFRSL 396
            EAFFMFRRMV NG +PDEV LA IVSACA  + L
Sbjct: 515 GEAFFMFRRMVCNGALPDEVSLATIVSACANVQEL 549

[Close]

BLAST of Lag0038409 vs. ExPASy Swiss-Prot
Match: Q9SS83 (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E88 PE=2 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 6.0e-116
Identity = 205/407 (50.37%), Postives = 281/407 (69.04%), Query Frame = 0


Query: 1   MWNHGVRPNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 60
           ++ + + PN+FTF++VLS C+R  +V +GRQ+HC + KMG    S+C G L+DMYAKC  
Sbjct: 151 LFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDR 210

Query: 61  LRDAHLVFDGALNLDAVSWTTLIAGYVQDGLPEEVIKVFDRMRRVGHVSDQVALVTVINA 120
           + DA  VF+  ++ + V WT L +GYV+ GLPEE + VF+RMR  GH  D +A VTVIN 
Sbjct: 211 ISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINT 270

Query: 121 YVALDRLADACELFARMPNPNIVAWNVMISGHAKRGFSEEAISFFLKLKRVGLKATRSTI 180
           Y+ L +L DA  LF  M +P++VAWNVMISGH KRG    AI +F  +++  +K+TRST+
Sbjct: 271 YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL 330

Query: 181 GSVLSAIASLSMLNYGLMVHAQVIKEGLNANVYVGSALVNMYAKCEKMDAAKEVFNTLDE 240
           GSVLSAI  ++ L+ GL+VHA+ IK GL +N+YVGS+LV+MY+KCEKM+AA +VF  L+E
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390

Query: 241 RNIVLWNAMLGGFSQNGLAREVMEFFSCMKQFGPQPDEFTYTSIFSARASLQYLDFGRQL 300
           +N V WNAM+ G++ NG + +VME F  MK  G   D+FT+TS+ S  A+   L+ G Q 
Sbjct: 391 KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQF 450

Query: 301 HTVMIKKKFASNIFVSNALVDMYAKLGALKEARKQFESMKVHDNVSWNAIIVGYVQEEYN 360
           H+++IKKK A N+FV NALVDMYAK GAL++AR+ FE M   DNV+WN II  YVQ+E  
Sbjct: 451 HSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENE 510

Query: 361 DEAFFMFRRMVSNGVVPDEVFLANIVSACAKFRSLNEDNNVTVSQLK 408
            EAF +F+RM   G+V D   LA+ + AC     L +   V    +K
Sbjct: 511 SEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK 557

[Close]

BLAST of Lag0038409 vs. ExPASy Swiss-Prot
Match: P93005 (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E19 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.4e-63
Identity = 144/455 (31.65%), Postives = 235/455 (51.65%), Query Frame = 0


Query: 6   VRPNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDAH 65
           + P+  T    L+  S+  +++ GR VH  + + G          L++ YAKC  L  AH
Sbjct: 10  LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69

Query: 66  LVFDGALNLDAVSWTTLIAGYVQDG---LPEEVIKVFDRMR------------------- 125
            +F+  +  D VSW +LI GY Q+G       V+++F  MR                   
Sbjct: 70  SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129

Query: 126 ----------------RVGHVSDQVALVTVINAYVALDRLADACELFARMPNPNIVAWNV 185
                           ++    D     +++  Y     + D  ++FA MP  N   W+ 
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189

Query: 186 MISGHAKRGFSEEAI---SFFLKLKRVGLKATRSTIGSVLSAIASLSMLNYGLMVHAQVI 245
           M+SG+A RG  EEAI   + FL+ K  G   +     +VLS++A+   +  G  +H   I
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEG-SDSDYVFTAVLSSLAATIYVGLGRQIHCITI 249

Query: 246 KEGLNANVYVGSALVNMYAKCEKMDAAKEVFNTLDERNIVLWNAMLGGFSQNGLAREVME 305
           K GL   V + +ALV MY+KCE ++ A ++F++  +RN + W+AM+ G+SQNG + E ++
Sbjct: 250 KNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVK 309

Query: 306 FFSCMKQFGPQPDEFTYTSIFSARASLQYLDFGRQLHTVMIKKKFASNIFVSNALVDMYA 365
            FS M   G +P E+T   + +A + + YL+ G+QLH+ ++K  F  ++F + ALVDMYA
Sbjct: 310 LFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYA 369

Query: 366 KLGALKEARKQFESMKVHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVVPDEVFLAN 420
           K G L +ARK F+ ++  D   W ++I GYVQ   N+EA  ++RRM + G++P++  +A+
Sbjct: 370 KAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMAS 429

[Close]

BLAST of Lag0038409 vs. ExPASy Swiss-Prot
Match: Q0WNP3 (Pentatricopeptide repeat-containing protein At4g18520, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-A2 PE=1 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.6e-60
Identity = 142/422 (33.65%), Postives = 209/422 (49.53%), Query Frame = 0


Query: 4   HGVR-PNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLR 63
           HG+R  NE  F  +L+ CSR  +   GRQVH  + K+G G     +  L+  YA+C  L 
Sbjct: 177 HGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELT 236

Query: 64  DAHLVFDGALNLDAVSWTTLIAGYVQDGLPEEVIKVFDRMRRVGHVSDQVALVTVINA-- 123
            A   FD     D +SWT +I+   + G   + I +F  M     + ++  + +++ A  
Sbjct: 237 SALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACS 296

Query: 124 ---------------------------------YVALDRLADACELFARMPNPNIVAWNV 183
                                            Y     ++D  ++F  M N N V W  
Sbjct: 297 EEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTS 356

Query: 184 MISGHAKRGFSEEAISFFLKLKRVGLKATRSTIGSVLSAIASLSMLNYGLMVHAQVIKEG 243
           +I+ HA+ GF EEAIS F  +KR  L A   T+ S+L A  S+  L  G  +HAQ+IK  
Sbjct: 357 IIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNS 416

Query: 244 LNANVYVGSALVNMYAKCEKMDAAKEVFNTLDERNIVLWNAMLGGFSQNGLAREVMEFFS 303
           +  NVY+GS LV +Y KC +   A  V   L  R++V W AM+ G S  G   E ++F  
Sbjct: 417 IEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLK 476

Query: 304 CMKQFGPQPDEFTYTSIFSARASLQYLDFGRQLHTVMIKKKFASNIFVSNALVDMYAKLG 363
            M Q G +P+ FTY+S   A A+ + L  GR +H++  K    SN+FV +AL+ MYAK G
Sbjct: 477 EMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCG 536

Query: 364 ALKEARKQFESMKVHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVVPDEVFLANIVS 390
            + EA + F+SM   + VSW A+I+GY +  +  EA  +  RM + G   D+   A I+S
Sbjct: 537 FVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILS 596

[Close]

BLAST of Lag0038409 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.1e-60
Identity = 133/420 (31.67%), Postives = 207/420 (49.29%), Query Frame = 0


Query: 6   VRPNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDAH 65
           V P  + F  +L  C    ++  G+++H  + K GF    F   GL +MYAKCR + +A 
Sbjct: 131 VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190

Query: 66  LVFDGALNLDAVSWTTLIAGYVQDGLPEEVIKVFDRMRRVGHVSDQVALVTVINA----- 125
            VFD     D VSW T++AGY Q+G+    +++   M         + +V+V+ A     
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250

Query: 126 ------------------------------YVALDRLADACELFARMPNPNIVAWNVMIS 185
                                         Y     L  A +LF  M   N+V+WN MI 
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310

Query: 186 GHAKRGFSEEAISFFLKLKRVGLKATRSTIGSVLSAIASLSMLNYGLMVHAQVIKEGLNA 245
            + +    +EA+  F K+   G+K T  ++   L A A L  L  G  +H   ++ GL+ 
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370

Query: 246 NVYVGSALVNMYAKCEKMDAAKEVFNTLDERNIVLWNAMLGGFSQNGLAREVMEFFSCMK 305
           NV V ++L++MY KC+++D A  +F  L  R +V WNAM+ GF+QNG   + + +FS M+
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR 430

Query: 306 QFGPQPDEFTYTSIFSARASLQYLDFGRQLHTVMIKKKFASNIFVSNALVDMYAKLGALK 365
               +PD FTY S+ +A A L      + +H V+++     N+FV+ ALVDMYAK GA+ 
Sbjct: 431 SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIM 490

Query: 366 EARKQFESMKVHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVVPDEVFLANIVSACA 391
            AR  F+ M      +WNA+I GY    +   A  +F  M    + P+ V   +++SAC+
Sbjct: 491 IARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACS 550

[Close]

BLAST of Lag0038409 vs. ExPASy Swiss-Prot
Match: Q9ZQ74 (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E47 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.1e-60
Identity = 146/444 (32.88%), Postives = 223/444 (50.23%), Query Frame = 0


Query: 1   MWNHGVRPNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 60
           +  HG R ++  F+  L AC+ L D+  G+++HC + K+   F +    GL+DMYAKC  
Sbjct: 133 LMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGE 192

Query: 61  LRDAHLVFDGALNLDAVSWTTLIAGYVQDGLPEEVIKVFDRMRRVGHVSDQVALVTVINA 120
           ++ AH VF+     + V WT++IAGYV++ L EE + +F+RMR    + ++    T+I A
Sbjct: 193 IKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMA 252

Query: 121 -----------------------------------YVALDRLADACELFARMPNPNIVAW 180
                                              YV    +++A  +F    + ++V W
Sbjct: 253 CTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMW 312

Query: 181 NVMISGHAKRGFSEEAISFFLKLKRVGLKATRSTIGSVLSAIASLSMLNYGLMVHAQVIK 240
             MI G+   G   EA+S F K+K V +K    TI SVLS    +  L  G  VH   IK
Sbjct: 313 TAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIK 372

Query: 241 EGLNANVYVGSALVNMYAKCEKMDAAKEVFNTLDERNIVLWNAMLGGFSQNGLAREVMEF 300
            G+  +  V +ALV+MYAKC +   AK VF    E++IV WN+++ GFSQNG   E +  
Sbjct: 373 VGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFL 432

Query: 301 FSCMKQFGPQPDEFTYTSIFSARASLQYLDFGRQLHTVMIKKKF--ASNIFVSNALVDMY 360
           F  M      P+  T  S+FSA ASL  L  G  LH   +K  F  +S++ V  AL+D Y
Sbjct: 433 FHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFY 492

Query: 361 AKLGALKEARKQFESMKVHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVVPDEVFLA 408
           AK G  + AR  F++++  + ++W+A+I GY ++     +  +F  M+     P+E    
Sbjct: 493 AKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFT 552

[Close]

BLAST of Lag0038409 vs. ExPASy TrEMBL
Match: A0A5A7TIQ6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G00290 PE=3 SV=1)

HSP 1 Score: 685.3 bits (1767), Expect = 1.6e-193
Identity = 334/397 (84.13%), Postives = 364/397 (91.69%), Query Frame = 0


Query: 1   MWNHGVRPNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 60
           MWNHGVRPNEFTFAMVLSACS L D+ YG+QVHCGVFKMGFGFRSFCQGGLIDMYAKCRN
Sbjct: 133 MWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 192

Query: 61  LRDAHLVFDGALNLDAVSWTTLIAGYVQDGLPEEVIKVFDRMRRVGHVSDQVALVTVINA 120
           LRDA LVFDGALNLD VSWTTLIAGYV+DG P E +KVFD+M+RVGHV DQ+ALVTVINA
Sbjct: 193 LRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINA 252

Query: 121 YVALDRLADACELFARMPNPNIVAWNVMISGHAKRGFSEEAISFFLKLKRVGLKATRSTI 180
           YVAL RLADA +LF ++PNPN+VAWNVMISGHAKRGF+EEAISFFL+LK+ GLKATRS++
Sbjct: 253 YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSL 312

Query: 181 GSVLSAIASLSMLNYGLMVHAQVIKEGLNANVYVGSALVNMYAKCEKMDAAKEVFNTLDE 240
           GSVLSAIASLSMLNYG MVHAQ IKEGL+ NVYVGSALVNMYAKC KMDAAK+VFN+L E
Sbjct: 313 GSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372

Query: 241 RNIVLWNAMLGGFSQNGLAREVMEFFSCMKQFGPQPDEFTYTSIFSARASLQYLDFGRQL 300
           RNIVLWNAMLGGF+QNGLA+EVMEFFS MK+ GPQPDEFT+TSIFSA ASL YLDFG QL
Sbjct: 373 RNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQL 432

Query: 301 HTVMIKKKFASNIFVSNALVDMYAKLGALKEARKQFESMKVHDNVSWNAIIVGYVQEEYN 360
           HTVMIK KF SN+FV+NALVDMYAK GALKEARKQFE MK+HDNVSWNAIIVGYVQEEYN
Sbjct: 433 HTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYN 492

Query: 361 DEAFFMFRRMVSNGVVPDEVFLANIVSACAKFRSLNE 398
           DEAFFMFRRMVSNGV+PDEV LA+IVSACA  +   +
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQ 529

[Close]

BLAST of Lag0038409 vs. ExPASy TrEMBL
Match: A0A5D3D800 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00860 PE=3 SV=1)

HSP 1 Score: 685.3 bits (1767), Expect = 1.6e-193
Identity = 334/397 (84.13%), Postives = 364/397 (91.69%), Query Frame = 0


Query: 1   MWNHGVRPNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 60
           MWNHGVRPNEFTFAMVLSACS L D+ YG+QVHCGVFKMGFGFRSFCQGGLIDMYAKCRN
Sbjct: 133 MWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 192

Query: 61  LRDAHLVFDGALNLDAVSWTTLIAGYVQDGLPEEVIKVFDRMRRVGHVSDQVALVTVINA 120
           LRDA LVFDGALNLD VSWTTLIAGYV+DG P E +KVFD+M+RVGHV DQ+ALVTVINA
Sbjct: 193 LRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINA 252

Query: 121 YVALDRLADACELFARMPNPNIVAWNVMISGHAKRGFSEEAISFFLKLKRVGLKATRSTI 180
           YVAL RLADA +LF ++PNPN+VAWNVMISGHAKRGF+EEAISFFL+LK+ GLKATRS++
Sbjct: 253 YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSL 312

Query: 181 GSVLSAIASLSMLNYGLMVHAQVIKEGLNANVYVGSALVNMYAKCEKMDAAKEVFNTLDE 240
           GSVLSAIASLSMLNYG MVHAQ IKEGL+ NVYVGSALVNMYAKC KMDAAK+VFN+L E
Sbjct: 313 GSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372

Query: 241 RNIVLWNAMLGGFSQNGLAREVMEFFSCMKQFGPQPDEFTYTSIFSARASLQYLDFGRQL 300
           RNIVLWNAMLGGF+QNGLA+EVMEFFS MK+ GPQPDEFT+TSIFSA ASL YLDFG QL
Sbjct: 373 RNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQL 432

Query: 301 HTVMIKKKFASNIFVSNALVDMYAKLGALKEARKQFESMKVHDNVSWNAIIVGYVQEEYN 360
           HTVMIK KF SN+FV+NALVDMYAK GALKEARKQFE MK+HDNVSWNAIIVGYVQEEYN
Sbjct: 433 HTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYN 492

Query: 361 DEAFFMFRRMVSNGVVPDEVFLANIVSACAKFRSLNE 398
           DEAFFMFRRMVSNGV+PDEV LA+IVSACA  +   +
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQ 529

[Close]

BLAST of Lag0038409 vs. ExPASy TrEMBL
Match: E5GCI3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 685.3 bits (1767), Expect = 1.6e-193
Identity = 334/397 (84.13%), Postives = 364/397 (91.69%), Query Frame = 0


Query: 1   MWNHGVRPNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 60
           MWNHGVRPNEFTFAMVLSACS L D+ YG+QVHCGVFKMGFGFRSFCQGGLIDMYAKCRN
Sbjct: 133 MWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 192

Query: 61  LRDAHLVFDGALNLDAVSWTTLIAGYVQDGLPEEVIKVFDRMRRVGHVSDQVALVTVINA 120
           LRDA LVFDGALNLD VSWTTLIAGYV+DG P E +KVFD+M+RVGHV DQ+ALVTVINA
Sbjct: 193 LRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINA 252

Query: 121 YVALDRLADACELFARMPNPNIVAWNVMISGHAKRGFSEEAISFFLKLKRVGLKATRSTI 180
           YVAL RLADA +LF ++PNPN+VAWNVMISGHAKRGF+EEAISFFL+LK+ GLKATRS++
Sbjct: 253 YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSL 312

Query: 181 GSVLSAIASLSMLNYGLMVHAQVIKEGLNANVYVGSALVNMYAKCEKMDAAKEVFNTLDE 240
           GSVLSAIASLSMLNYG MVHAQ IKEGL+ NVYVGSALVNMYAKC KMDAAK+VFN+L E
Sbjct: 313 GSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372

Query: 241 RNIVLWNAMLGGFSQNGLAREVMEFFSCMKQFGPQPDEFTYTSIFSARASLQYLDFGRQL 300
           RNIVLWNAMLGGF+QNGLA+EVMEFFS MK+ GPQPDEFT+TSIFSA ASL YLDFG QL
Sbjct: 373 RNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQL 432

Query: 301 HTVMIKKKFASNIFVSNALVDMYAKLGALKEARKQFESMKVHDNVSWNAIIVGYVQEEYN 360
           HTVMIK KF SN+FV+NALVDMYAK GALKEARKQFE MK+HDNVSWNAIIVGYVQEEYN
Sbjct: 433 HTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYN 492

Query: 361 DEAFFMFRRMVSNGVVPDEVFLANIVSACAKFRSLNE 398
           DEAFFMFRRMVSNGV+PDEV LA+IVSACA  +   +
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQ 529

[Close]

BLAST of Lag0038409 vs. ExPASy TrEMBL
Match: A0A1S3CST1 (pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103503924 PE=4 SV=1)

HSP 1 Score: 685.3 bits (1767), Expect = 1.6e-193
Identity = 334/397 (84.13%), Postives = 364/397 (91.69%), Query Frame = 0


Query: 1   MWNHGVRPNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 60
           MWNHGVRPNEFTFAMVLSACS L D+ YG+QVHCGVFKMGFGFRSFCQGGLIDMYAKCRN
Sbjct: 133 MWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 192

Query: 61  LRDAHLVFDGALNLDAVSWTTLIAGYVQDGLPEEVIKVFDRMRRVGHVSDQVALVTVINA 120
           LRDA LVFDGALNLD VSWTTLIAGYV+DG P E +KVFD+M+RVGHV DQ+ALVTVINA
Sbjct: 193 LRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINA 252

Query: 121 YVALDRLADACELFARMPNPNIVAWNVMISGHAKRGFSEEAISFFLKLKRVGLKATRSTI 180
           YVAL RLADA +LF ++PNPN+VAWNVMISGHAKRGF+EEAISFFL+LK+ GLKATRS++
Sbjct: 253 YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSL 312

Query: 181 GSVLSAIASLSMLNYGLMVHAQVIKEGLNANVYVGSALVNMYAKCEKMDAAKEVFNTLDE 240
           GSVLSAIASLSMLNYG MVHAQ IKEGL+ NVYVGSALVNMYAKC KMDAAK+VFN+L E
Sbjct: 313 GSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372

Query: 241 RNIVLWNAMLGGFSQNGLAREVMEFFSCMKQFGPQPDEFTYTSIFSARASLQYLDFGRQL 300
           RNIVLWNAMLGGF+QNGLA+EVMEFFS MK+ GPQPDEFT+TSIFSA ASL YLDFG QL
Sbjct: 373 RNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQL 432

Query: 301 HTVMIKKKFASNIFVSNALVDMYAKLGALKEARKQFESMKVHDNVSWNAIIVGYVQEEYN 360
           HTVMIK KF SN+FV+NALVDMYAK GALKEARKQFE MK+HDNVSWNAIIVGYVQEEYN
Sbjct: 433 HTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYN 492

Query: 361 DEAFFMFRRMVSNGVVPDEVFLANIVSACAKFRSLNE 398
           DEAFFMFRRMVSNGV+PDEV LA+IVSACA  +   +
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQ 529

[Close]

BLAST of Lag0038409 vs. ExPASy TrEMBL
Match: A0A6J1IHS2 (pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111473755 PE=4 SV=1)

HSP 1 Score: 677.2 bits (1746), Expect = 4.5e-191
Identity = 335/395 (84.81%), Postives = 359/395 (90.89%), Query Frame = 0


Query: 1   MWNHGVRPNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 60
           MWN GVRPNEFTFAMVLSACSRL DV YGRQVHCGVFKMGFGF SFCQGGLIDMYAKC +
Sbjct: 155 MWNDGVRPNEFTFAMVLSACSRLLDVNYGRQVHCGVFKMGFGFSSFCQGGLIDMYAKCHD 214

Query: 61  LRDAHLVFDGALNLDAVSWTTLIAGYVQDGLPEEVIKVFDRMRRVGHVSDQVALVTVINA 120
           LRDA LVFDGALN+D VSWT LIAGYVQDGLPEE +KVFDRM+ VG V DQ+ALVTVINA
Sbjct: 215 LRDARLVFDGALNMDTVSWTALIAGYVQDGLPEEAVKVFDRMQTVGLVPDQIALVTVINA 274

Query: 121 YVALDRLADACELFARMPNPNIVAWNVMISGHAKRGFSEEAISFFLKLKRVGLKATRSTI 180
           YVALDRL DA +LFA++PNPNIVAWNVMISGHAKRGF+ EAISFFL+LKR GLKATRSTI
Sbjct: 275 YVALDRLGDARKLFAQLPNPNIVAWNVMISGHAKRGFALEAISFFLELKRTGLKATRSTI 334

Query: 181 GSVLSAIASLSMLNYGLMVHAQVIKEGLNANVYVGSALVNMYAKCEKMDAAKEVFNTLDE 240
           GSVLSAIASLSMLNYGLMVHAQVIKEGL+ NVYVGSALVNMYAKCEKMDAA EVFN+L+E
Sbjct: 335 GSVLSAIASLSMLNYGLMVHAQVIKEGLHDNVYVGSALVNMYAKCEKMDAATEVFNSLEE 394

Query: 241 RNIVLWNAMLGGFSQNGLAREVMEFFSCMKQFGPQPDEFTYTSIFSARASLQYLDFGRQL 300
           RNIVLWNAML GF+QNGLA EVM+ FS MK++GPQPDEFT+TSIFSA ASLQYLDFGRQL
Sbjct: 395 RNIVLWNAMLAGFAQNGLAHEVMDLFSYMKRYGPQPDEFTFTSIFSACASLQYLDFGRQL 454

Query: 301 HTVMIKKKFASNIFVSNALVDMYAKLGALKEARKQFESMKVHDNVSWNAIIVGYVQEEYN 360
           H VMIK KF SN+FV+NALVDMYAK GALK+ARKQFE MK+HDNVSWNAIIVGYVQEEYN
Sbjct: 455 HNVMIKNKFVSNLFVANALVDMYAKSGALKDARKQFELMKIHDNVSWNAIIVGYVQEEYN 514

Query: 361 DEAFFMFRRMVSNGVVPDEVFLANIVSACAKFRSL 396
            EAFFMFRRMV NG +PDEV LA IVSACA  + L
Sbjct: 515 GEAFFMFRRMVCNGALPDEVSLATIVSACANVQEL 549

[Close]

BLAST of Lag0038409 vs. TAIR 10
Match: AT3G09040.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 419.1 bits (1076), Expect = 4.2e-117
Identity = 205/407 (50.37%), Postives = 281/407 (69.04%), Query Frame = 0


Query: 1   MWNHGVRPNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 60
           ++ + + PN+FTF++VLS C+R  +V +GRQ+HC + KMG    S+C G L+DMYAKC  
Sbjct: 151 LFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDR 210

Query: 61  LRDAHLVFDGALNLDAVSWTTLIAGYVQDGLPEEVIKVFDRMRRVGHVSDQVALVTVINA 120
           + DA  VF+  ++ + V WT L +GYV+ GLPEE + VF+RMR  GH  D +A VTVIN 
Sbjct: 211 ISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINT 270

Query: 121 YVALDRLADACELFARMPNPNIVAWNVMISGHAKRGFSEEAISFFLKLKRVGLKATRSTI 180
           Y+ L +L DA  LF  M +P++VAWNVMISGH KRG    AI +F  +++  +K+TRST+
Sbjct: 271 YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTL 330

Query: 181 GSVLSAIASLSMLNYGLMVHAQVIKEGLNANVYVGSALVNMYAKCEKMDAAKEVFNTLDE 240
           GSVLSAI  ++ L+ GL+VHA+ IK GL +N+YVGS+LV+MY+KCEKM+AA +VF  L+E
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390

Query: 241 RNIVLWNAMLGGFSQNGLAREVMEFFSCMKQFGPQPDEFTYTSIFSARASLQYLDFGRQL 300
           +N V WNAM+ G++ NG + +VME F  MK  G   D+FT+TS+ S  A+   L+ G Q 
Sbjct: 391 KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQF 450

Query: 301 HTVMIKKKFASNIFVSNALVDMYAKLGALKEARKQFESMKVHDNVSWNAIIVGYVQEEYN 360
           H+++IKKK A N+FV NALVDMYAK GAL++AR+ FE M   DNV+WN II  YVQ+E  
Sbjct: 451 HSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENE 510

Query: 361 DEAFFMFRRMVSNGVVPDEVFLANIVSACAKFRSLNEDNNVTVSQLK 408
            EAF +F+RM   G+V D   LA+ + AC     L +   V    +K
Sbjct: 511 SEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK 557

[Close]

BLAST of Lag0038409 vs. TAIR 10
Match: AT2G33680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 243.8 bits (621), Expect = 2.4e-64
Identity = 144/455 (31.65%), Postives = 235/455 (51.65%), Query Frame = 0


Query: 6   VRPNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDAH 65
           + P+  T    L+  S+  +++ GR VH  + + G          L++ YAKC  L  AH
Sbjct: 10  LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69

Query: 66  LVFDGALNLDAVSWTTLIAGYVQDG---LPEEVIKVFDRMR------------------- 125
            +F+  +  D VSW +LI GY Q+G       V+++F  MR                   
Sbjct: 70  SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129

Query: 126 ----------------RVGHVSDQVALVTVINAYVALDRLADACELFARMPNPNIVAWNV 185
                           ++    D     +++  Y     + D  ++FA MP  N   W+ 
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189

Query: 186 MISGHAKRGFSEEAI---SFFLKLKRVGLKATRSTIGSVLSAIASLSMLNYGLMVHAQVI 245
           M+SG+A RG  EEAI   + FL+ K  G   +     +VLS++A+   +  G  +H   I
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEG-SDSDYVFTAVLSSLAATIYVGLGRQIHCITI 249

Query: 246 KEGLNANVYVGSALVNMYAKCEKMDAAKEVFNTLDERNIVLWNAMLGGFSQNGLAREVME 305
           K GL   V + +ALV MY+KCE ++ A ++F++  +RN + W+AM+ G+SQNG + E ++
Sbjct: 250 KNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVK 309

Query: 306 FFSCMKQFGPQPDEFTYTSIFSARASLQYLDFGRQLHTVMIKKKFASNIFVSNALVDMYA 365
            FS M   G +P E+T   + +A + + YL+ G+QLH+ ++K  F  ++F + ALVDMYA
Sbjct: 310 LFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYA 369

Query: 366 KLGALKEARKQFESMKVHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVVPDEVFLAN 420
           K G L +ARK F+ ++  D   W ++I GYVQ   N+EA  ++RRM + G++P++  +A+
Sbjct: 370 KAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMAS 429

[Close]

BLAST of Lag0038409 vs. TAIR 10
Match: AT4G18520.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 235.0 bits (598), Expect = 1.1e-61
Identity = 142/422 (33.65%), Postives = 209/422 (49.53%), Query Frame = 0


Query: 4   HGVR-PNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLR 63
           HG+R  NE  F  +L+ CSR  +   GRQVH  + K+G G     +  L+  YA+C  L 
Sbjct: 177 HGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELT 236

Query: 64  DAHLVFDGALNLDAVSWTTLIAGYVQDGLPEEVIKVFDRMRRVGHVSDQVALVTVINA-- 123
            A   FD     D +SWT +I+   + G   + I +F  M     + ++  + +++ A  
Sbjct: 237 SALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACS 296

Query: 124 ---------------------------------YVALDRLADACELFARMPNPNIVAWNV 183
                                            Y     ++D  ++F  M N N V W  
Sbjct: 297 EEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTS 356

Query: 184 MISGHAKRGFSEEAISFFLKLKRVGLKATRSTIGSVLSAIASLSMLNYGLMVHAQVIKEG 243
           +I+ HA+ GF EEAIS F  +KR  L A   T+ S+L A  S+  L  G  +HAQ+IK  
Sbjct: 357 IIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNS 416

Query: 244 LNANVYVGSALVNMYAKCEKMDAAKEVFNTLDERNIVLWNAMLGGFSQNGLAREVMEFFS 303
           +  NVY+GS LV +Y KC +   A  V   L  R++V W AM+ G S  G   E ++F  
Sbjct: 417 IEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLK 476

Query: 304 CMKQFGPQPDEFTYTSIFSARASLQYLDFGRQLHTVMIKKKFASNIFVSNALVDMYAKLG 363
            M Q G +P+ FTY+S   A A+ + L  GR +H++  K    SN+FV +AL+ MYAK G
Sbjct: 477 EMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCG 536

Query: 364 ALKEARKQFESMKVHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVVPDEVFLANIVS 390
            + EA + F+SM   + VSW A+I+GY +  +  EA  +  RM + G   D+   A I+S
Sbjct: 537 FVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILS 596

[Close]

BLAST of Lag0038409 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 234.6 bits (597), Expect = 1.5e-61
Identity = 133/420 (31.67%), Postives = 207/420 (49.29%), Query Frame = 0


Query: 6   VRPNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDAH 65
           V P  + F  +L  C    ++  G+++H  + K GF    F   GL +MYAKCR + +A 
Sbjct: 131 VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190

Query: 66  LVFDGALNLDAVSWTTLIAGYVQDGLPEEVIKVFDRMRRVGHVSDQVALVTVINA----- 125
            VFD     D VSW T++AGY Q+G+    +++   M         + +V+V+ A     
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250

Query: 126 ------------------------------YVALDRLADACELFARMPNPNIVAWNVMIS 185
                                         Y     L  A +LF  M   N+V+WN MI 
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310

Query: 186 GHAKRGFSEEAISFFLKLKRVGLKATRSTIGSVLSAIASLSMLNYGLMVHAQVIKEGLNA 245
            + +    +EA+  F K+   G+K T  ++   L A A L  L  G  +H   ++ GL+ 
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370

Query: 246 NVYVGSALVNMYAKCEKMDAAKEVFNTLDERNIVLWNAMLGGFSQNGLAREVMEFFSCMK 305
           NV V ++L++MY KC+++D A  +F  L  R +V WNAM+ GF+QNG   + + +FS M+
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR 430

Query: 306 QFGPQPDEFTYTSIFSARASLQYLDFGRQLHTVMIKKKFASNIFVSNALVDMYAKLGALK 365
               +PD FTY S+ +A A L      + +H V+++     N+FV+ ALVDMYAK GA+ 
Sbjct: 431 SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIM 490

Query: 366 EARKQFESMKVHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVVPDEVFLANIVSACA 391
            AR  F+ M      +WNA+I GY    +   A  +F  M    + P+ V   +++SAC+
Sbjct: 491 IARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACS 550

[Close]

BLAST of Lag0038409 vs. TAIR 10
Match: AT2G03380.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 233.0 bits (593), Expect = 4.3e-61
Identity = 146/444 (32.88%), Postives = 223/444 (50.23%), Query Frame = 0


Query: 1   MWNHGVRPNEFTFAMVLSACSRLGDVIYGRQVHCGVFKMGFGFRSFCQGGLIDMYAKCRN 60
           +  HG R ++  F+  L AC+ L D+  G+++HC + K+   F +    GL+DMYAKC  
Sbjct: 133 LMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGE 192

Query: 61  LRDAHLVFDGALNLDAVSWTTLIAGYVQDGLPEEVIKVFDRMRRVGHVSDQVALVTVINA 120
           ++ AH VF+     + V WT++IAGYV++ L EE + +F+RMR    + ++    T+I A
Sbjct: 193 IKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMA 252

Query: 121 -----------------------------------YVALDRLADACELFARMPNPNIVAW 180
                                              YV    +++A  +F    + ++V W
Sbjct: 253 CTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMW 312

Query: 181 NVMISGHAKRGFSEEAISFFLKLKRVGLKATRSTIGSVLSAIASLSMLNYGLMVHAQVIK 240
             MI G+   G   EA+S F K+K V +K    TI SVLS    +  L  G  VH   IK
Sbjct: 313 TAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIK 372

Query: 241 EGLNANVYVGSALVNMYAKCEKMDAAKEVFNTLDERNIVLWNAMLGGFSQNGLAREVMEF 300
            G+  +  V +ALV+MYAKC +   AK VF    E++IV WN+++ GFSQNG   E +  
Sbjct: 373 VGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFL 432

Query: 301 FSCMKQFGPQPDEFTYTSIFSARASLQYLDFGRQLHTVMIKKKF--ASNIFVSNALVDMY 360
           F  M      P+  T  S+FSA ASL  L  G  LH   +K  F  +S++ V  AL+D Y
Sbjct: 433 FHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFY 492

Query: 361 AKLGALKEARKQFESMKVHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVVPDEVFLA 408
           AK G  + AR  F++++  + ++W+A+I GY ++     +  +F  M+     P+E    
Sbjct: 493 AKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFT 552

The following BLAST results are available for this feature:

BLAST of Lag0038409 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34182.1	3.4e-193	84.13	pentatricopeptide repeat-containing protein [Cucumis melo subsp. melo]	[more]
TYK19689.1	3.4e-193	84.13	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
KAA0041567.1	3.4e-193	84.13	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008466537.1	3.4e-193	84.13	PREDICTED: pentatricopeptide repeat-containing protein At3g09040, mitochondrial ...	[more]
XP_022974928.1	9.3e-191	84.81	pentatricopeptide repeat-containing protein At3g09040, mitochondrial [Cucurbita ...	[more]

BLAST of Lag0038409 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SS83	6.0e-116	50.37	Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidop...	[more]
P93005	3.4e-63	31.65	Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX...	[more]
Q0WNP3	1.6e-60	33.65	Pentatricopeptide repeat-containing protein At4g18520, chloroplastic OS=Arabidop...	[more]
Q3E6Q1	2.1e-60	31.67	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]
Q9ZQ74	6.1e-60	32.88	Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidop...	[more]

BLAST of Lag0038409 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TIQ6	1.6e-193	84.13	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3D800	1.6e-193	84.13	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
E5GCI3	1.6e-193	84.13	Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo OX=41267...	[more]
A0A1S3CST1	1.6e-193	84.13	pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Cucumis ...	[more]
A0A6J1IHS2	4.5e-191	84.81	pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Cucurbit...	[more]

BLAST of Lag0038409 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09040.1	4.2e-117	50.37	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G33680.1	2.4e-64	31.65	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G18520.1	1.1e-61	33.65	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G11290.1	1.5e-61	31.67	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G03380.1	4.3e-61	32.88	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 241..287 e-value: 2.4E-10 score: 40.4 coord: 140..187 e-value: 8.9E-8 score: 32.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 143..174 e-value: 9.8E-5 score: 20.3 coord: 345..379 e-value: 1.2E-5 score: 23.2 coord: 77..110 e-value: 9.7E-8 score: 29.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 77..106 e-value: 1.6E-8 score: 34.2 coord: 116..138 e-value: 0.44 score: 10.9 coord: 345..375 e-value: 9.0E-6 score: 25.6 coord: 317..341 e-value: 0.019 score: 15.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 75..109 score: 11.640958
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 242..276 score: 10.862706
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 343..377 score: 11.377887
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 141..175 score: 10.64348
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 146..291 e-value: 1.5E-28 score: 102.1 coord: 1..139 e-value: 1.5E-25 score: 92.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 292..412 e-value: 6.2E-21 score: 77.1
None	No IPR available	PANTHER	PTHR24015:SF1825	OSJNBB0070J16.5 PROTEIN	coord: 344..395 coord: 123..341 coord: 51..124
None	No IPR available	PANTHER	PTHR24015:SF1825	OSJNBB0070J16.5 PROTEIN	coord: 1..60
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 344..395
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 1..60
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 123..341 coord: 51..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0038409.1	Lag0038409.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0006508	proteolysis
biological_process	GO:0009451	RNA modification
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0000774	adenyl-nucleotide exchange factor activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004185	serine-type carboxypeptidase activity
molecular_function	GO:0005515	protein binding