Lag0038406 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0038406
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Ureidoglycolate hydrolase
Location	chr2: 16833634 .. 16837770 (-)
RNA-Seq Expression	Lag0038406
Synteny	Lag0038406

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCAACGATGAAGCTGAAGGCCATAGAAGCCACTCCAGAGAGCTTCGAAGAGTACGGCCAAGTCATCGAGCCTTCGGACGACGGCGTTGAATTCGGAGATCAAGACGCTCAATTAGACCTTCGCAATGGAACCCCGAGGTAGGATCTCTCATTTTTCCAAATTTTCCCCCAAAAAATCGCTTCGCGAAATCTCGATTTCTAGGGTTCTGAATGATGTCGATCTGAAAGAACAGATTCTACATACTCCACATCGAGAATCGGCCTTTCAATTTCTCCAGAATCACGCATCATGCGAGCGTAACGCAGTGCCTTGGATCGGTGGATCGGCAGGCTTGGTATCTCGGAGTTGCGAAGCCGTCGATCGTGGAGGATGGAGTCGATGAGAGTAGATCGGTTGTGAGGTCTAAGAGCGGGCATTTGTATGTGCCGCCTTGTGTTGATGAGATTCGAGTGTTCAGAATTTCAGGGGCGAAGTTTGTGAAGCTGAATAAAGGGACATGGCATGCTGGTCCTCTGTTCAGAGAAACCGCCAGGGATTTCTACAACTTGGAATTGAGTAATACTAATGTGAGTTCATTCCTTCTTCTCCATCGTCTCTCTCTCTTTTTGCCTTTTTGCTTTTTTTTTCCCCCTGTTTCTGATGTTCAATCCACATGATGATCTGAAAATTTTCGCGCTTTCGTTGGATTGCTTCCTATGGTCACTCAAAATTCTGTTTTATTGAATTTGTTCCCGTCCTCGACTAACCTAGCCTTATTCTTTTACTTAAAATTAAAATATCATTTTAGTTCTGCTTTTAGACTTATTCCAGGTATATAAAATAATAATGTAATTTTGACCTTAACAATGCTTGGCTGCATGATTTCCCTCTTTATACACTCCATCAAAATCTTGACGATTAGAGGGGTGAAGGATAGAAAATGAAAAAAAATTCATAGACTGGTTTGTCAATATTTGAATGGTGGTGTGTAGAAAGATATCAACACACTGCTATGCACCTAAGTATTATCTTTGAACATTATTTTTCTTTTAGAAATTATCTTTAAACATTATTAAGAGACTATTTGAACCCACTGAATCTATATATTTAATAGTGGGGTTGGATTAGGCTAATCATTAGTTAATGGTGGTGTACTTAAGAAAAGAAAAAATAGTTAATGGTGAGGTTGTAATGTAATCAATACTTCCACCCACCTCTTTATCTGTTCCTTTCTCAGAGTAAAAGAGGTGAAGGATGGACCAATTTCTTGGGAAATTGTATTCCCTCCGTCCCTGCATTTTCTACCTTTATGAAACAGCCATTGATGTCTTGTCTGTCCTTTTAAAATCTGACTCTTTCTCCATAGAGGTCTAGAATATAATGAGTCCAAATTTGGTCTAATCATAGATATCTTATCTCCAACGCAACCTTGTGGACGAGATTGTGGAATTAGGAGAGAGATTTCTGGTGAGCAAGAAGAGACGCTCGCAAGTGGCAACAATGGTAGTGACTAGTGAGAGAAAAGTATGAGGTTGAAGATGAAGAAAGGAGGGCGTAGAGAGGATATCATACGCCCTCATTGAAAGTAATATAAAATTAATAGATTAACCGGAGGACCATTTAGAACGATTTGTTTAAAATAAATAAATAAATAAATATTATTTAAGGACAAAATACACTCTTAAATTATTTAGAATTAATATAATTTAATTCATTCATGCAAATTAATTTATATTTAATTTTTTTTTATTATGTAATTCTGATTAATTATTTATTTCTTTTTTGAAAAAAATCTCATTAATTAATACAAACTAACGAATTAATTTCAGTTTAATTTAAAATAATTATGAGAATATTTCAATTGTTTTGAATTAGTTAATTCTACTTATTAACTCATTTCAATTAATTAAGGTCCCGTTGGATAACTATTTGGTTTTTGAAAATTAAGTTTATACACACATACTTCCACCTATAAGTTTCTTGGTTTTAGTATCAATCTTCTACCTTGTGTTTCAAAAACCAACCCAAAATTTGGAAAAAAAAAAAGAAAAAAAAAGACGGTCCCGTTTGATAACCATTTGGTTTTTTAAAATTAAGCCTATGAACACTACTGCAACTCATAAATCTACTTGTTTTGTAATCTACCATATTCTCATATTTTCAAAAATAAAGTCAAGTGTTATATGTTTAACAAATATGAAAACCATGGTATGAAAATTGGAAGAAAACAAACATAATTTTCACAAACCAAAAACAAAAAACCAAACGGGACTATAGTTTTTAAAAACTTGTTTTTGTTTTTAAAATTTGGCTAGGAATTCAAATGCAACCTTAACTTCAAAAACCAAGCATAATTTTCAAAGCCATGGTAGGAAATTGAGGAGAAAATAAACATAATTTTCAAAAATAAAAAACAAAAACCAAATAGTTATCAAACGAGACCTATTTTTTTAGTTTTAAAAAATTGGCTTTGAATTTTAAAAATATGAAAGAAGGGTATGAGAAAAACTATGTGAAATTATTGTTTATAAACTTAATTTTAAAAAACAAAAAACCAAATAGTTAGGAAAGATTTTAAAATTTGCTCGCAACTCTTCTAGAAAGATTATAGGTATGAAAAGTAAAATGGTAAAATTTTGTCCCTCGACAAACAAATTTCTGACTCTGACCCTACCCTACCCTACCCACACATAAAAGGAACAGTGCATGCCTAGGAGAACCCTAATGTCCATGTCAACCTTTCAAATACTGATAGATACCAAACCTGGGAATCTTTTGTATTTCCCATCTCCATGTCAACCTTTCAAATTTCATACCAAACAAGGGAATCTTTTGCCCTAAAGGTAGATAGAAATGTGCACATGTCATGACAAAAAATTTGACGAAAATTTGGATGGAATTAGTTGTAGTATAAAAGTTCCATGTCCATGCCTCAATTTTATACAAACGTCGGTAACATGTTGATGCCAATAGATATTTCTAGAAAAATTACGAAAATAAAAAATTCATACAAATGTTAATTAACAAATTAAGTCTTTCACCCCTTTTAACACAAGTTTTAAATATTTTATTATTAATATTAGGTTTACATTACTAATCTTTTATTAATATTTTTGTTACATTTTGTCAATTTTTCTATTATTTAATGAAAATTTCAATTCATTCCTTATATCAATGGAAAACCTATGAAAGGATATGTATGAAAATACTGACGAAGAGATGTCGACATGTCGATGAGAATTTTAAAATTTTAGTTGTAATCTTTTAGAGAAATTGTGGGCCTTTGACTTGTGCATGGTGGAATTCAAGTTTGTTCATCAGTGTCCATGGTTGGTCCCAACAAATACACATAATTGCTACCATCTTTATCCTTTAGAAAGCTTTTTTTTTTTTCTTTTCTTTACTTTCTTTTTTTCTTCCTGCTGCTGATTCCATCTGTATCCTTTTGGTAAAAATGTCTTAAATCACTCATTGGAGGTATGTTTGGTTTAACTTTTTAAGGATTTAATTTTGAAAAAAATTCTACTGTTTGGCAACAATTAAAAATGACTAATTAAAAAAATGAGATTTAAAAATAAACAATTTTGAAAGAAATACTTGAAAGCAAATTTTTTAAAAAAAGTTTTTAAGTATATAATAACTTGTATATAAAAACATTTATACGAGAAATGTAACCAAAATGTTTTTTTTTTAAATGCATTATTGAAAAACATCAAACTAAAAAGGTATTCCAAACGAAATTTTGAAAAATTAGAGTTGATCAATTCCTTTTTTCTTTTGTTTTATAGGAGAGGTTGAAAATGAATGTCAGTAGAAATTTCGGATGTTCACTAGAAATAAACACAAAAAGATTTTATTGATATAGTCTATCATAATACTTTGTGAACGAAAGATTAAAGTTTGATATTACTAATTGACTTTAAAATTAAACCTTATAGATTTTCAACTATTTTCGTATGATATTTTTAAAAGTAAAAACAATGTTCGAAACCGCATTTGATACGAAATCATTTTAGTATTATAATTCAATATCATTTCAAAGACAAATATTATAACTTTATCTTTCTCCCTTTTTTCCCCTTGTAGATTGTTGATCATACTTGTTACAACATTGGAGAGGAAAATGGGATATTATTTGACATTGAGGATTAG

mRNA sequence

ATGAAAGCAACGATGAAGCTGAAGGCCATAGAAGCCACTCCAGAGAGCTTCGAAGAGTACGGCCAAGTCATCGAGCCTTCGGACGACGGCGTTGAATTCGGAGATCAAGACGCTCAATTAGACCTTCGCAATGGAACCCCGAGATTCTACATACTCCACATCGAGAATCGGCCTTTCAATTTCTCCAGAATCACGCATCATGCGAGCGTAACGCAGTGCCTTGGATCGGTGGATCGGCAGGCTTGGTATCTCGGAGTTGCGAAGCCGTCGATCGTGGAGGATGGAGTCGATGAGAGTAGATCGGTTGTGAGGTCTAAGAGCGGGCATTTGTATGTGCCGCCTTGTGTTGATGAGATTCGAGTGTTCAGAATTTCAGGGGCGAAGTTTGTGAAGCTGAATAAAGGGACATGGCATGCTGGTCCTCTGTTCAGAGAAACCGCCAGGGATTTCTACAACTTGGAATTGAGTAATACTAATATTGTTGATCATACTTGTTACAACATTGGAGAGGAAAATGGGATATTATTTGACATTGAGGATTAG

Coding sequence (CDS)

ATGAAAGCAACGATGAAGCTGAAGGCCATAGAAGCCACTCCAGAGAGCTTCGAAGAGTACGGCCAAGTCATCGAGCCTTCGGACGACGGCGTTGAATTCGGAGATCAAGACGCTCAATTAGACCTTCGCAATGGAACCCCGAGATTCTACATACTCCACATCGAGAATCGGCCTTTCAATTTCTCCAGAATCACGCATCATGCGAGCGTAACGCAGTGCCTTGGATCGGTGGATCGGCAGGCTTGGTATCTCGGAGTTGCGAAGCCGTCGATCGTGGAGGATGGAGTCGATGAGAGTAGATCGGTTGTGAGGTCTAAGAGCGGGCATTTGTATGTGCCGCCTTGTGTTGATGAGATTCGAGTGTTCAGAATTTCAGGGGCGAAGTTTGTGAAGCTGAATAAAGGGACATGGCATGCTGGTCCTCTGTTCAGAGAAACCGCCAGGGATTTCTACAACTTGGAATTGAGTAATACTAATATTGTTGATCATACTTGTTACAACATTGGAGAGGAAAATGGGATATTATTTGACATTGAGGATTAG

Protein sequence

MKATMKLKAIEATPESFEEYGQVIEPSDDGVEFGDQDAQLDLRNGTPRFYILHIENRPFNFSRITHHASVTQCLGSVDRQAWYLGVAKPSIVEDGVDESRSVVRSKSGHLYVPPCVDEIRVFRISGAKFVKLNKGTWHAGPLFRETARDFYNLELSNTNIVDHTCYNIGEENGILFDIED

Homology

[Close]

BLAST of Lag0038406 vs. NCBI nr
Match: XP_022926175.1 (uncharacterized protein LOC111433372 [Cucurbita moschata])

HSP 1 Score: 313.5 bits (802), Expect = 1.2e-81
Identity = 146/180 (81.11%), Postives = 164/180 (91.11%), Query Frame = 0


Query: 5   MKLKAIEATPESFEEYGQVIEPSDDGVEFGDQDAQLDLRNGTPRFYILHIENRPFNFSRI 64
           MKLKAIEATPESF EYGQVIEP+DDG+ FG  DAQLDL NGTPRFYILHIENRPFNFS I
Sbjct: 1   MKLKAIEATPESFAEYGQVIEPTDDGLGFGPDDAQLDLTNGTPRFYILHIENRPFNFSMI 60

Query: 65  THHASVTQCLGSVDRQAWYLGVAKPSIVED----GVDESRSVVRSKSGHLYVPPCVDEIR 124
           THHA VTQCLGSVDRQ WYL VAKPSIV+D    G+D+S SV+RSKSGHL+VPPCVD+I+
Sbjct: 61  THHARVTQCLGSVDRQPWYLAVAKPSIVDDEHKTGIDKSESVLRSKSGHLFVPPCVDDIK 120

Query: 125 VFRISGAKFVKLNKGTWHAGPLFRETARDFYNLELSNTNIVDHTCYNIGEENGILFDIED 181
           VF+ISGAKFVKLNKGTWHAGPLFRE+ARDFYNLEL+NTN+VDHT Y++G+ENG+ F+IED
Sbjct: 121 VFKISGAKFVKLNKGTWHAGPLFRESARDFYNLELTNTNVVDHTTYDLGKENGVPFEIED 180

[Close]

BLAST of Lag0038406 vs. NCBI nr
Match: XP_022981624.1 (uncharacterized protein LOC111480690 [Cucurbita maxima])

HSP 1 Score: 312.8 bits (800), Expect = 2.0e-81
Identity = 145/180 (80.56%), Postives = 164/180 (91.11%), Query Frame = 0


Query: 5   MKLKAIEATPESFEEYGQVIEPSDDGVEFGDQDAQLDLRNGTPRFYILHIENRPFNFSRI 64
           MKLKA+EATPESF EYGQVIEP+DDG+ FG  DAQLDL NGTPRFYILHIENRPFNFS I
Sbjct: 1   MKLKAMEATPESFAEYGQVIEPTDDGLGFGPDDAQLDLSNGTPRFYILHIENRPFNFSMI 60

Query: 65  THHASVTQCLGSVDRQAWYLGVAKPSIVED----GVDESRSVVRSKSGHLYVPPCVDEIR 124
           THHA VTQCLGSVDRQ WYL VAKPSIV+D    G+D+S SV+RSKSGHL++PPCVDEI+
Sbjct: 61  THHARVTQCLGSVDRQPWYLAVAKPSIVDDEHKTGIDKSESVLRSKSGHLFLPPCVDEIK 120

Query: 125 VFRISGAKFVKLNKGTWHAGPLFRETARDFYNLELSNTNIVDHTCYNIGEENGILFDIED 181
           VF+ISGAKFVKLNKGTWHAGPLFRE+ARDFYNLEL+NTN+VDHT Y++G+ENG+ F+IED
Sbjct: 121 VFKISGAKFVKLNKGTWHAGPLFRESARDFYNLELTNTNVVDHTTYDLGKENGVSFEIED 180

[Close]

BLAST of Lag0038406 vs. NCBI nr
Match: KAG6607659.1 (hypothetical protein SDJN03_01001, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037261.1 hypothetical protein SDJN02_00884 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 312.8 bits (800), Expect = 2.0e-81
Identity = 146/180 (81.11%), Postives = 162/180 (90.00%), Query Frame = 0


Query: 5   MKLKAIEATPESFEEYGQVIEPSDDGVEFGDQDAQLDLRNGTPRFYILHIENRPFNFSRI 64
           MKLKAIEATPESF EYGQVIEP+DDG+ FG  DAQLDL NGTPRFYILHIENRPFNFS I
Sbjct: 1   MKLKAIEATPESFAEYGQVIEPTDDGLGFGPDDAQLDLTNGTPRFYILHIENRPFNFSMI 60

Query: 65  THHASVTQCLGSVDRQAWYLGVAKPSIVED----GVDESRSVVRSKSGHLYVPPCVDEIR 124
           THHA VTQCLGSVDRQ WYL VAKPSIV+D    G+D+S SV+RSKSGHL+VPPCVDEI+
Sbjct: 61  THHARVTQCLGSVDRQPWYLAVAKPSIVDDEHKTGIDKSESVLRSKSGHLFVPPCVDEIK 120

Query: 125 VFRISGAKFVKLNKGTWHAGPLFRETARDFYNLELSNTNIVDHTCYNIGEENGILFDIED 181
           VF+ISG KFVKLNKGTWHAGPLFRE+ARDFYNLEL+NTN+VDHT Y +G+ENG+ F+IED
Sbjct: 121 VFKISGVKFVKLNKGTWHAGPLFRESARDFYNLELTNTNVVDHTTYELGKENGVPFEIED 180

[Close]

BLAST of Lag0038406 vs. NCBI nr
Match: XP_023523973.1 (uncharacterized protein LOC111788058 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311.6 bits (797), Expect = 4.4e-81
Identity = 145/180 (80.56%), Postives = 163/180 (90.56%), Query Frame = 0


Query: 5   MKLKAIEATPESFEEYGQVIEPSDDGVEFGDQDAQLDLRNGTPRFYILHIENRPFNFSRI 64
           MKLKAIEATPESF EYGQVIEP+DDG+ FG  DAQLDL NGTPRFYILHIENRPFNFS I
Sbjct: 1   MKLKAIEATPESFAEYGQVIEPTDDGLGFGPDDAQLDLTNGTPRFYILHIENRPFNFSMI 60

Query: 65  THHASVTQCLGSVDRQAWYLGVAKPSIVED----GVDESRSVVRSKSGHLYVPPCVDEIR 124
           THHA VTQCLGSVDRQ WYL VAKPSIV+D    G+D+S  V+RSKSGHL++PPCVDEI+
Sbjct: 61  THHARVTQCLGSVDRQPWYLAVAKPSIVDDEHKTGIDKSEPVLRSKSGHLFLPPCVDEIK 120

Query: 125 VFRISGAKFVKLNKGTWHAGPLFRETARDFYNLELSNTNIVDHTCYNIGEENGILFDIED 181
           VF+ISGAKFVKLNKGTWHAGPLFRE+ARDFYNLEL+NTN+VDHT Y++G+ENG+ F+IED
Sbjct: 121 VFKISGAKFVKLNKGTWHAGPLFRESARDFYNLELTNTNVVDHTTYDLGKENGVPFEIED 180

[Close]

BLAST of Lag0038406 vs. NCBI nr
Match: XP_022154427.1 (uncharacterized protein LOC111021698 [Momordica charantia])

HSP 1 Score: 295.4 bits (755), Expect = 3.3e-76
Identity = 142/180 (78.89%), Postives = 152/180 (84.44%), Query Frame = 0


Query: 1   MKATMKLKAIEATPESFEEYGQVIEPSDDGVEFGDQDAQLDLRNGTPRFYILHIENRPFN 60
           MK  +KLKAIEAT ESF EYGQV+E  DDGV FG  DAQLDL NGTPRFYILHIENRPFN
Sbjct: 1   MKMKLKLKAIEATRESFAEYGQVVEAMDDGVNFGPLDAQLDLSNGTPRFYILHIENRPFN 60

Query: 61  FSRITHHASVTQCLGSVDRQAWYLGVAKPSIVEDGVDESRSVVRSKSGHLYVPPCVDEIR 120
           FS+ITHHA VTQCLGSVDRQ+WYLGVAKPSIV DG D +   VRS  GHL+VPP VDEIR
Sbjct: 61  FSKITHHAKVTQCLGSVDRQSWYLGVAKPSIVADGDDANERSVRSGCGHLFVPPSVDEIR 120

Query: 121 VFRISGAKFVKLNKGTWHAGPLFRETARDFYNLELSNTNIVDHTCYNIGEENGILFDIED 180
           VFRISGAKFVKL+KGTWHAGPLFRETARDFYNLELSNTN VD T YN  +EN   F++ED
Sbjct: 121 VFRISGAKFVKLHKGTWHAGPLFRETARDFYNLELSNTNEVDQTTYNFEKENEAFFEVED 180

The following BLAST results are available for this feature:

BLAST of Lag0038406 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926175.1	1.2e-81	81.11	uncharacterized protein LOC111433372 [Cucurbita moschata]	[more]
XP_022981624.1	2.0e-81	80.56	uncharacterized protein LOC111480690 [Cucurbita maxima]	[more]
KAG6607659.1	2.0e-81	81.11	hypothetical protein SDJN03_01001, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023523973.1	4.4e-81	80.56	uncharacterized protein LOC111788058 [Cucurbita pepo subsp. pepo]	[more]
XP_022154427.1	3.3e-76	78.89	uncharacterized protein LOC111021698 [Momordica charantia]	[more]

BLAST of Lag0038406 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024060	Ureidoglycolate lyase domain superfamily	GENE3D	2.60.120.480	Ureidoglycolate hydrolase	coord: 5..178 e-value: 8.5E-27 score: 95.9
None	No IPR available	PANTHER	PTHR35721	UREIDOGLYCOLATE HYDROLASE	coord: 3..180
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 5..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0038406.1	Lag0038406.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004848	ureidoglycolate hydrolase activity