Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGCCAAGGCTGAGCCGACCATGACCATGGCCGAGACCGAGCACATTCTTTTGGTAAGTTCGAGAAATATACACCAACGACAATTCCACAGGAGCAAGTTTTGATGGAGATTCGAAACACGGGTCTTCTTAAATTTCCTAGGAGGATGAAGTCAAATCCCGACAGAAGAGACAAGAGCCAATACTGTCGTTTCCACTGAGATCATGGGCATTCAACCAGAAATTGTATTCAGTTGAAGGATGAAATTGAAGCAGTGATCCAGAATGAATATCTGAAAGAATTTGTCGCTGAAACCAGGGCTGAGGCTGAGACCGACCAGAGATGGCCGAGGCCGAGGCTGACCAAAGATGGCAGAGACAAGGAAGAACCCCCACGAGAGATCATAACCATCTTTGGAGGACCAGTTGGAGGAGGTTCAAGTAGGAAAAGGAAAGCTATTGTCAGGGAAGCAAGGTTCGAACCAGAATATCGAGATATGTACTCTATCCATCTAGCAAAGGCACACCCCCTTTAGAGTTCACTGAGGCTGAGGCAGCAAGCATTCATCGGCCACATATTGATGCTCTGGTGGTCACTTTAATGGTAGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAACTCGGCTGATGTCCTTTCTCTAACAACCTTTAAAGCGATGCAGTTAGAGAGAGAACTCTTAAAGTCGAGCCTTACCCCACTTGTAGGGTTTGGAGGAGAAAGAGTGACCCCAAAGGGTAACATAGAACTTCCTGTGACCTTTGGGGATGGACAGAATGCAGTAACAAAGATGATAAACTTCCTAGTTGTGGATTGCATGTCAGCCTACAATGCATTCTTCGGAAGGCCAACCTTGTACGAAATGAAGGCCATAGCTTCGACTTATCATCAGTTGCTGAAGTTTCCAACTCAGAATGGTGTGGGAGTTGTCAAAGGAGAGTAG
mRNA sequence
ATGGTGGCCAAGGCTGAGCCGACCATGACCATGGCCGAGACCGAGCACATTCTTTTGTTGAAGGATGAAATTGAAGCAGTGATCCAGAATGAATATCTGAAAGAATTTGTCGCTGAAACCAGGGCTGAGGCTGAGACCGACCAGAGATGGCCGAGGCCGAGGCTGACCAAAGATGGCAGAGACAAGGAAGAACCCCCACGAGAGATCATAACCATCTTTGGAGGACCAGTTGGAGGAGGCACACCCCCTTTAGAGTTCACTGAGGCTGAGGCAGCAAGCATTCATCGGCCACATATTGATGCTCTGGTGGTCACTTTAATGGTAGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAACTCGGCTGATGTCCTTTCTCTAACAACCTTTAAAGCGATGCAGTTAGAGAGAGAACTCTTAAAGTCGAGCCTTACCCCACTTGTAGGGTTTGGAGGAGAAAGAGTGACCCCAAAGGGTAACATAGAACTTCCTGTGACCTTTGGGGATGGACAGAATGCAGTAACAAAGATGATAAACTTCCTAGTTGTGGATTGCATGTCAGCCTACAATGCATTCTTCGGAAGGCCAACCTTGTACGAAATGAAGGCCATAGCTTCGACTTATCATCAGTTGCTGAAGTTTCCAACTCAGAATGGTGTGGGAGTTGTCAAAGGAGAGTAG
Coding sequence (CDS)
ATGGTGGCCAAGGCTGAGCCGACCATGACCATGGCCGAGACCGAGCACATTCTTTTGTTGAAGGATGAAATTGAAGCAGTGATCCAGAATGAATATCTGAAAGAATTTGTCGCTGAAACCAGGGCTGAGGCTGAGACCGACCAGAGATGGCCGAGGCCGAGGCTGACCAAAGATGGCAGAGACAAGGAAGAACCCCCACGAGAGATCATAACCATCTTTGGAGGACCAGTTGGAGGAGGCACACCCCCTTTAGAGTTCACTGAGGCTGAGGCAGCAAGCATTCATCGGCCACATATTGATGCTCTGGTGGTCACTTTAATGGTAGCCAATGTGAAAATCCATCGGATCCTAATTGATGGAGGAAACTCGGCTGATGTCCTTTCTCTAACAACCTTTAAAGCGATGCAGTTAGAGAGAGAACTCTTAAAGTCGAGCCTTACCCCACTTGTAGGGTTTGGAGGAGAAAGAGTGACCCCAAAGGGTAACATAGAACTTCCTGTGACCTTTGGGGATGGACAGAATGCAGTAACAAAGATGATAAACTTCCTAGTTGTGGATTGCATGTCAGCCTACAATGCATTCTTCGGAAGGCCAACCTTGTACGAAATGAAGGCCATAGCTTCGACTTATCATCAGTTGCTGAAGTTTCCAACTCAGAATGGTGTGGGAGTTGTCAAAGGAGAGTAG
Protein sequence
MVAKAEPTMTMAETEHILLLKDEIEAVIQNEYLKEFVAETRAEAETDQRWPRPRLTKDGRDKEEPPREIITIFGGPVGGGTPPLEFTEAEAASIHRPHIDALVVTLMVANVKIHRILIDGGNSADVLSLTTFKAMQLERELLKSSLTPLVGFGGERVTPKGNIELPVTFGDGQNAVTKMINFLVVDCMSAYNAFFGRPTLYEMKAIASTYHQLLKFPTQNGVGVVKGE
Homology
BLAST of Lag0038353 vs. NCBI nr
Match:
XP_022155873.1 (uncharacterized protein LOC111022886 [Momordica charantia])
HSP 1 Score: 196.8 bits (499), Expect = 2.0e-46
Identity = 105/216 (48.61%), Postives = 141/216 (65.28%), Query Frame = 0
Query: 14 TEHILLLKDEIEAVIQNEYLKEFVAETRAEAETDQRWPRPRLTKDG-RDKEEPPREIITI 73
T+ LK+E+E +I++ YLKE+V + P+ T++G D P REI TI
Sbjct: 54 TQDCFDLKEEVEGLIRSGYLKEYVED-------------PKATQNGENDSNSPVREIRTI 113
Query: 74 FGGPVGGGTPPLEFTEAEAASIHRPHIDALVVTLMVANVKIHRILIDGGNSADVLSLTTF 133
+ LEF+E EA + PH DALV+TL +AN K+HRIL+DGG+S ++SLT +
Sbjct: 114 ----MEEQPAKLEFSEDEATHLFHPHNDALVITLKIANAKVHRILVDGGSSTYIISLTAY 173
Query: 134 KAMQLERELLKSSLTPLVGFGGERVTPKGNIELPVTFGDGQNAVTKMINFLVVDCMSAYN 193
KAM L + LKSS PLVGFGGERV P+G IELPV FG G ++ KM++FLVV S+YN
Sbjct: 174 KAMDLGEKALKSSPVPLVGFGGERVIPEGRIELPVMFGSGPKSIIKMVDFLVVYYASSYN 233
Query: 194 AFFGRPTLYEMKAIASTYHQLLKFPTQNGVGVVKGE 229
GRP ++ +K I STYHQ +KFPT +G+G +KGE
Sbjct: 234 VILGRPKMHMLKEIPSTYHQSMKFPTSSGIGEIKGE 252
BLAST of Lag0038353 vs. NCBI nr
Match:
XP_022158093.1 (uncharacterized protein LOC111024662 [Momordica charantia])
HSP 1 Score: 195.3 bits (495), Expect = 5.8e-46
Identity = 106/244 (43.44%), Postives = 143/244 (58.61%), Query Frame = 0
Query: 14 TEHILLLKDEIEAVIQNEYLKEFVAETRAEAETDQRWPRPRLTKDGRDKEEPPREIITIF 73
T+ LK+E+E +I+ YLKE+V + +A ++ D + P +EI TIF
Sbjct: 24 TQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSE------------NDDKSPVKEIQTIF 83
Query: 74 GGPV-----------------------------GGGTPPLEFTEAEAASIHRPHIDALVV 133
GGP G ++F+E E + PH DALV+
Sbjct: 84 GGPTERELGKKRKASMQEARASPGYCKVYHASFTGQPSKIKFSEDETTRLFHPHNDALVI 143
Query: 134 TLMVANVKIHRILIDGGNSADVLSLTTFKAMQLERELLKSSLTPLVGFGGERVTPKGNIE 193
TL + N K+HRIL+DGG+S ++SLT +KAM L + LKS+L PLVGFGGERV K I+
Sbjct: 144 TLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVGFGGERVIQKCRIK 203
Query: 194 LPVTFGDGQNAVTKMINFLVVDCMSAYNAFFGRPTLYEMKAIASTYHQLLKFPTQNGVGV 229
LPVTFG+G +TK++ FLVVD S+YNA GRPT++ +KAI STYH+ LKFPT G+
Sbjct: 204 LPVTFGNGPRNITKIVEFLVVDYSSSYNAILGRPTIHTLKAIPSTYHKSLKFPTDGGISE 255
BLAST of Lag0038353 vs. NCBI nr
Match:
XP_022150858.1 (uncharacterized protein LOC111018902 [Momordica charantia])
HSP 1 Score: 190.7 bits (483), Expect = 1.4e-44
Identity = 102/215 (47.44%), Postives = 135/215 (62.79%), Query Frame = 0
Query: 14 TEHILLLKDEIEAVIQNEYLKEFVAETRAEAETDQRWPRPRLTKDGRDKEEPPREIITIF 73
T+ LK+E+E +IQ YLKE+V + P+ T++ R+ R+ I+
Sbjct: 46 TQDCFDLKEEVEGLIQRGYLKEYVKD-------------PKATQNKRE-----RQAYKIY 105
Query: 74 GGPVGGGTPPLEFTEAEAASIHRPHIDALVVTLMVANVKIHRILIDGGNSADVLSLTTFK 133
V +EF E E I PH DALV+ L +AN K+H IL+DGG+S D++SLT +K
Sbjct: 106 HAFVEEQPTKIEFLEDEVTHIFHPHNDALVINLKIANAKVHWILVDGGSSPDIISLTAYK 165
Query: 134 AMQLERELLKSSLTPLVGFGGERVTPKGNIELPVTFGDGQNAVTKMINFLVVDCMSAYNA 193
M L LKSS PLVGFGGE V P+G IELPVTFG G ++TKM++FLVVD S+ NA
Sbjct: 166 TMDLGERGLKSSPAPLVGFGGEWVIPEGRIELPVTFGSGPKSITKMVDFLVVDYASSCNA 225
Query: 194 FFGRPTLYEMKAIASTYHQLLKFPTQNGVGVVKGE 229
GRPT++ +KAI S YHQ +KFPT G+G +KGE
Sbjct: 226 ILGRPTMHMLKAIPSRYHQSIKFPTPGGIGEIKGE 242
BLAST of Lag0038353 vs. NCBI nr
Match:
XP_022155186.1 (uncharacterized protein LOC111022321 [Momordica charantia])
HSP 1 Score: 190.3 bits (482), Expect = 1.9e-44
Identity = 91/145 (62.76%), Postives = 114/145 (78.62%), Query Frame = 0
Query: 84 LEFTEAEAASIHRPHIDALVVTLMVANVKIHRILIDGGNSADVLSLTTFKAMQLERELLK 143
+EF+E EA + PH DALV+TL +ANVK+HRIL+DGG+SAD++S T +KAM L ++LK
Sbjct: 41 IEFSENEATHLLHPHNDALVITLKIANVKVHRILVDGGSSADIISWTAYKAMDLGEKVLK 100
Query: 144 SSLTPLVGFGGERVTPKGNIELPVTFGDGQNAVTKMINFLVVDCMSAYNAFFGRPTLYEM 203
SS PLVGFGGERV +G IELPVTFG G +VTKM++FLVV+ S+YNA GRPT++ +
Sbjct: 101 SSPAPLVGFGGERVILEGRIELPVTFGSGPKSVTKMVDFLVVNYTSSYNAILGRPTMHML 160
Query: 204 KAIASTYHQLLKFPTQNGVGVVKGE 229
KAI STYHQ KFPT GVG +KGE
Sbjct: 161 KAIPSTYHQSXKFPTXGGVGEIKGE 185
BLAST of Lag0038353 vs. NCBI nr
Match:
XP_022144467.1 (uncharacterized protein LOC111014147 [Momordica charantia])
HSP 1 Score: 189.9 bits (481), Expect = 2.4e-44
Identity = 101/215 (46.98%), Postives = 136/215 (63.26%), Query Frame = 0
Query: 14 TEHILLLKDEIEAVIQNEYLKEFVAETRAEAETDQRWPRPRLTKDGRDKEEPPREIITIF 73
T+ LK+E+E +I+ YLKE+V E P+ T++G + P REI TI
Sbjct: 38 TQDCFDLKEEVEGLIRRGYLKEYVEE-------------PKATQNGESDKSPAREIRTIM 97
Query: 74 GGPVGGGTPPLEFTEAEAASIHRPHIDALVVTLMVANVKIHRILIDGGNSADVLSLTTFK 133
GGP+ + + A R + +ANVK+HR+L+DGG+ AD+LS T +K
Sbjct: 98 GGPIERESGRKRKADVREARTGREQNE-------IANVKVHRVLVDGGSLADILSWTAYK 157
Query: 134 AMQLERELLKSSLTPLVGFGGERVTPKGNIELPVTFGDGQNAVTKMINFLVVDCMSAYNA 193
AM L ++LKSS PLVGFGGERV P+G IE PVTFG G +VTKM++ LVV+ S+YNA
Sbjct: 158 AMDLGEKVLKSSPAPLVGFGGERVIPEGRIEXPVTFGSGPKSVTKMVDXLVVNYTSSYNA 217
Query: 194 FFGRPTLYEMKAIASTYHQLLKFPTQNGVGVVKGE 229
GRPT++ ++AI STYHQ +KFPT GVG +KGE
Sbjct: 218 ILGRPTMHMLRAIPSTYHQSMKFPTPGGVGEIKGE 232
BLAST of Lag0038353 vs. ExPASy TrEMBL
Match:
A0A6J1DP33 (uncharacterized protein LOC111022886 OS=Momordica charantia OX=3673 GN=LOC111022886 PE=4 SV=1)
HSP 1 Score: 196.8 bits (499), Expect = 9.7e-47
Identity = 105/216 (48.61%), Postives = 141/216 (65.28%), Query Frame = 0
Query: 14 TEHILLLKDEIEAVIQNEYLKEFVAETRAEAETDQRWPRPRLTKDG-RDKEEPPREIITI 73
T+ LK+E+E +I++ YLKE+V + P+ T++G D P REI TI
Sbjct: 54 TQDCFDLKEEVEGLIRSGYLKEYVED-------------PKATQNGENDSNSPVREIRTI 113
Query: 74 FGGPVGGGTPPLEFTEAEAASIHRPHIDALVVTLMVANVKIHRILIDGGNSADVLSLTTF 133
+ LEF+E EA + PH DALV+TL +AN K+HRIL+DGG+S ++SLT +
Sbjct: 114 ----MEEQPAKLEFSEDEATHLFHPHNDALVITLKIANAKVHRILVDGGSSTYIISLTAY 173
Query: 134 KAMQLERELLKSSLTPLVGFGGERVTPKGNIELPVTFGDGQNAVTKMINFLVVDCMSAYN 193
KAM L + LKSS PLVGFGGERV P+G IELPV FG G ++ KM++FLVV S+YN
Sbjct: 174 KAMDLGEKALKSSPVPLVGFGGERVIPEGRIELPVMFGSGPKSIIKMVDFLVVYYASSYN 233
Query: 194 AFFGRPTLYEMKAIASTYHQLLKFPTQNGVGVVKGE 229
GRP ++ +K I STYHQ +KFPT +G+G +KGE
Sbjct: 234 VILGRPKMHMLKEIPSTYHQSMKFPTSSGIGEIKGE 252
BLAST of Lag0038353 vs. ExPASy TrEMBL
Match:
A0A6J1DV51 (uncharacterized protein LOC111024662 OS=Momordica charantia OX=3673 GN=LOC111024662 PE=4 SV=1)
HSP 1 Score: 195.3 bits (495), Expect = 2.8e-46
Identity = 106/244 (43.44%), Postives = 143/244 (58.61%), Query Frame = 0
Query: 14 TEHILLLKDEIEAVIQNEYLKEFVAETRAEAETDQRWPRPRLTKDGRDKEEPPREIITIF 73
T+ LK+E+E +I+ YLKE+V + +A ++ D + P +EI TIF
Sbjct: 24 TQDCFDLKEEVEGLIRRGYLKEYVEDPKATLNSE------------NDDKSPVKEIQTIF 83
Query: 74 GGPV-----------------------------GGGTPPLEFTEAEAASIHRPHIDALVV 133
GGP G ++F+E E + PH DALV+
Sbjct: 84 GGPTERELGKKRKASMQEARASPGYCKVYHASFTGQPSKIKFSEDETTRLFHPHNDALVI 143
Query: 134 TLMVANVKIHRILIDGGNSADVLSLTTFKAMQLERELLKSSLTPLVGFGGERVTPKGNIE 193
TL + N K+HRIL+DGG+S ++SLT +KAM L + LKS+L PLVGFGGERV K I+
Sbjct: 144 TLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGEKALKSNLAPLVGFGGERVIQKCRIK 203
Query: 194 LPVTFGDGQNAVTKMINFLVVDCMSAYNAFFGRPTLYEMKAIASTYHQLLKFPTQNGVGV 229
LPVTFG+G +TK++ FLVVD S+YNA GRPT++ +KAI STYH+ LKFPT G+
Sbjct: 204 LPVTFGNGPRNITKIVEFLVVDYSSSYNAILGRPTIHTLKAIPSTYHKSLKFPTDGGISE 255
BLAST of Lag0038353 vs. ExPASy TrEMBL
Match:
A0A6J1DAK4 (uncharacterized protein LOC111018902 OS=Momordica charantia OX=3673 GN=LOC111018902 PE=4 SV=1)
HSP 1 Score: 190.7 bits (483), Expect = 6.9e-45
Identity = 102/215 (47.44%), Postives = 135/215 (62.79%), Query Frame = 0
Query: 14 TEHILLLKDEIEAVIQNEYLKEFVAETRAEAETDQRWPRPRLTKDGRDKEEPPREIITIF 73
T+ LK+E+E +IQ YLKE+V + P+ T++ R+ R+ I+
Sbjct: 46 TQDCFDLKEEVEGLIQRGYLKEYVKD-------------PKATQNKRE-----RQAYKIY 105
Query: 74 GGPVGGGTPPLEFTEAEAASIHRPHIDALVVTLMVANVKIHRILIDGGNSADVLSLTTFK 133
V +EF E E I PH DALV+ L +AN K+H IL+DGG+S D++SLT +K
Sbjct: 106 HAFVEEQPTKIEFLEDEVTHIFHPHNDALVINLKIANAKVHWILVDGGSSPDIISLTAYK 165
Query: 134 AMQLERELLKSSLTPLVGFGGERVTPKGNIELPVTFGDGQNAVTKMINFLVVDCMSAYNA 193
M L LKSS PLVGFGGE V P+G IELPVTFG G ++TKM++FLVVD S+ NA
Sbjct: 166 TMDLGERGLKSSPAPLVGFGGEWVIPEGRIELPVTFGSGPKSITKMVDFLVVDYASSCNA 225
Query: 194 FFGRPTLYEMKAIASTYHQLLKFPTQNGVGVVKGE 229
GRPT++ +KAI S YHQ +KFPT G+G +KGE
Sbjct: 226 ILGRPTMHMLKAIPSRYHQSIKFPTPGGIGEIKGE 242
BLAST of Lag0038353 vs. ExPASy TrEMBL
Match:
A0A6J1DQY2 (uncharacterized protein LOC111022321 OS=Momordica charantia OX=3673 GN=LOC111022321 PE=4 SV=1)
HSP 1 Score: 190.3 bits (482), Expect = 9.0e-45
Identity = 91/145 (62.76%), Postives = 114/145 (78.62%), Query Frame = 0
Query: 84 LEFTEAEAASIHRPHIDALVVTLMVANVKIHRILIDGGNSADVLSLTTFKAMQLERELLK 143
+EF+E EA + PH DALV+TL +ANVK+HRIL+DGG+SAD++S T +KAM L ++LK
Sbjct: 41 IEFSENEATHLLHPHNDALVITLKIANVKVHRILVDGGSSADIISWTAYKAMDLGEKVLK 100
Query: 144 SSLTPLVGFGGERVTPKGNIELPVTFGDGQNAVTKMINFLVVDCMSAYNAFFGRPTLYEM 203
SS PLVGFGGERV +G IELPVTFG G +VTKM++FLVV+ S+YNA GRPT++ +
Sbjct: 101 SSPAPLVGFGGERVILEGRIELPVTFGSGPKSVTKMVDFLVVNYTSSYNAILGRPTMHML 160
Query: 204 KAIASTYHQLLKFPTQNGVGVVKGE 229
KAI STYHQ KFPT GVG +KGE
Sbjct: 161 KAIPSTYHQSXKFPTXGGVGEIKGE 185
BLAST of Lag0038353 vs. ExPASy TrEMBL
Match:
A0A6J1CTS4 (uncharacterized protein LOC111014147 OS=Momordica charantia OX=3673 GN=LOC111014147 PE=4 SV=1)
HSP 1 Score: 189.9 bits (481), Expect = 1.2e-44
Identity = 101/215 (46.98%), Postives = 136/215 (63.26%), Query Frame = 0
Query: 14 TEHILLLKDEIEAVIQNEYLKEFVAETRAEAETDQRWPRPRLTKDGRDKEEPPREIITIF 73
T+ LK+E+E +I+ YLKE+V E P+ T++G + P REI TI
Sbjct: 38 TQDCFDLKEEVEGLIRRGYLKEYVEE-------------PKATQNGESDKSPAREIRTIM 97
Query: 74 GGPVGGGTPPLEFTEAEAASIHRPHIDALVVTLMVANVKIHRILIDGGNSADVLSLTTFK 133
GGP+ + + A R + +ANVK+HR+L+DGG+ AD+LS T +K
Sbjct: 98 GGPIERESGRKRKADVREARTGREQNE-------IANVKVHRVLVDGGSLADILSWTAYK 157
Query: 134 AMQLERELLKSSLTPLVGFGGERVTPKGNIELPVTFGDGQNAVTKMINFLVVDCMSAYNA 193
AM L ++LKSS PLVGFGGERV P+G IE PVTFG G +VTKM++ LVV+ S+YNA
Sbjct: 158 AMDLGEKVLKSSPAPLVGFGGERVIPEGRIEXPVTFGSGPKSVTKMVDXLVVNYTSSYNA 217
Query: 194 FFGRPTLYEMKAIASTYHQLLKFPTQNGVGVVKGE 229
GRPT++ ++AI STYHQ +KFPT GVG +KGE
Sbjct: 218 ILGRPTMHMLRAIPSTYHQSMKFPTPGGVGEIKGE 232
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DP33 | 9.7e-47 | 48.61 | uncharacterized protein LOC111022886 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A6J1DV51 | 2.8e-46 | 43.44 | uncharacterized protein LOC111024662 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A6J1DAK4 | 6.9e-45 | 47.44 | uncharacterized protein LOC111018902 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A6J1DQY2 | 9.0e-45 | 62.76 | uncharacterized protein LOC111022321 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A6J1CTS4 | 1.2e-44 | 46.98 | uncharacterized protein LOC111014147 OS=Momordica charantia OX=3673 GN=LOC111014... | [more] |
Match Name | E-value | Identity | Description | |