Lag0038343 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGATGACGAGCTAAGGAAGATCCAGGATCTGGAAAATGTACTGGTGTGCAAAATAATAACAGAGAAGTATATTAACCCAGAAATCTTTAAATCTATGATTCCGAAAATCTGGAACATGGAGGGAAAGGTCACTGTCAAGAAAACGGGTGAAAATATGTTCGAATGCTCTTTTAACTCACTAAAAGAAAAAAGGAAAGTGATGGAAGGAAGTCCGTGGATCTACGACATAGCTTTCATTACCTTTGAAGAGATTAAAGGGAATGAAAGATACTCACGACTTTAGTTTAGGTACGCCTCGTTTTGGATTCATTTTACTGACTTGCCAAGAATCTGCTTCACCAGGAAATGGGCAGAGGATCTGGGCAATGCAGTGGGAACCTTTGAACGAGTTGACTTGGACAAGGAGGAGTACGAGGTTGGAAATTCCTTGAGGGTGAGAGTCAGGATTGATATCAAGAGGCCCTTGAGGAGAGGGACGATGATCAGAATCAGAACAAATGCGGAAGAAGAATGGGTAGATATGAGGTTTGAAAAACTCCCAGAATTTTGCTTTGGATGCGGGAGAACTGGCCACCTGGCAAGAGAATGTCCAGAAACTGAAGCCATTAACAGAGACAAACTGGACTATGGAGCATGGCTGAAAAGAGATTTCAATCAAAGAACGAAAATGGGAACCAAGACAGGCGCAGTTCGAAAAGGCTATGAAGCAGGATTGAGAAAAGGGAAATCAAGACCAGAGCAAGAAAATAAAGATGACGATCCGCCAGAGGAGACGAACGGAACGACACCGGAAGATTTGAAAACCAGAAACCAGGGAGTAGTGAAGAAAACGACAAAAAAAAGGCTAGTGAGCAGGCATCGGGAAGTACAGAAGTTATCATGA ATGGAAGATGACGAGCTAAGGAAGATCCAGGATCTGGAAAATGTACTGGTGTGCAAAATAATAACAGAGAAGAAATGGGCAGAGGATCTGGGCAATGCAGTGGGAACCTTTGAACGAGTTGACTTGGACAAGGAGGAGTACGAGGTTGGAAATTCCTTGAGGGTGAGAGTCAGGATTGATATCAAGAGGCCCTTGAGGAGAGGGACGATGATCAGAATCAGAACAAATGCGGAAGAAGAATGGGTAGATATGAGGTTTGAAAAACTCCCAGAATTTTGCTTTGGATGCGGGAGAACTGGCCACCTGGCAAGAGAATGTCCAGAAACTGAAGCCATTAACAGAGACAAACTGGACTATGGAGCATGGCTGAAAAGAGATTTCAATCAAAGAACGAAAATGGGAACCAAGACAGGCGCAGTTCGAAAAGGCTATGAAGCAGGATTGAGAAAAGGGAAATCAAGACCAGAGCAAGAAAATAAAGATGACGATCCGCCAGAGGAGACGAACGGAACGACACCGGAAGATTTGAAAACCAGAAACCAGGGAGTAGTGAAGAAAACGACAAAAAAAAGGCTAGTGAGCAGGCATCGGGAAGTACAGAAGTTATCATGA ATGGAAGATGACGAGCTAAGGAAGATCCAGGATCTGGAAAATGTACTGGTGTGCAAAATAATAACAGAGAAGAAATGGGCAGAGGATCTGGGCAATGCAGTGGGAACCTTTGAACGAGTTGACTTGGACAAGGAGGAGTACGAGGTTGGAAATTCCTTGAGGGTGAGAGTCAGGATTGATATCAAGAGGCCCTTGAGGAGAGGGACGATGATCAGAATCAGAACAAATGCGGAAGAAGAATGGGTAGATATGAGGTTTGAAAAACTCCCAGAATTTTGCTTTGGATGCGGGAGAACTGGCCACCTGGCAAGAGAATGTCCAGAAACTGAAGCCATTAACAGAGACAAACTGGACTATGGAGCATGGCTGAAAAGAGATTTCAATCAAAGAACGAAAATGGGAACCAAGACAGGCGCAGTTCGAAAAGGCTATGAAGCAGGATTGAGAAAAGGGAAATCAAGACCAGAGCAAGAAAATAAAGATGACGATCCGCCAGAGGAGACGAACGGAACGACACCGGAAGATTTGAAAACCAGAAACCAGGGAGTAGTGAAGAAAACGACAAAAAAAAGGCTAGTGAGCAGGCATCGGGAAGTACAGAAGTTATCATGA MEDDELRKIQDLENVLVCKIITEKKWAEDLGNAVGTFERVDLDKEEYEVGNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLARECPETEAINRDKLDYGAWLKRDFNQRTKMGTKTGAVRKGYEAGLRKGKSRPEQENKDDDPPEETNGTTPEDLKTRNQGVVKKTTKKRLVSRHREVQKLS Homology
BLAST of Lag0038343 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis]) HSP 1 Score: 99.4 bits (246), Expect = 3.9e-17 Identity = 57/154 (37.01%), Postives = 90/154 (58.44%), Query Frame = 0
BLAST of Lag0038343 vs. NCBI nr
Match: XP_028124075.1 (uncharacterized protein LOC114321128 [Camellia sinensis]) HSP 1 Score: 96.7 bits (239), Expect = 2.5e-16 Identity = 55/154 (35.71%), Postives = 90/154 (58.44%), Query Frame = 0
BLAST of Lag0038343 vs. NCBI nr
Match: GAU21788.1 (hypothetical protein TSUD_329120, partial [Trifolium subterraneum]) HSP 1 Score: 93.6 bits (231), Expect = 2.1e-15 Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = 0
BLAST of Lag0038343 vs. NCBI nr
Match: MCH80348.1 (hypothetical protein [Trifolium medium]) HSP 1 Score: 93.6 bits (231), Expect = 2.1e-15 Identity = 47/108 (43.52%), Postives = 67/108 (62.04%), Query Frame = 0
BLAST of Lag0038343 vs. NCBI nr
Match: XP_028071384.1 (uncharacterized protein LOC114273772 [Camellia sinensis]) HSP 1 Score: 92.8 bits (229), Expect = 3.6e-15 Identity = 55/154 (35.71%), Postives = 87/154 (56.49%), Query Frame = 0
BLAST of Lag0038343 vs. ExPASy TrEMBL
Match: A0A2Z6LV25 (Uncharacterized protein (Fragment) OS=Trifolium subterraneum OX=3900 GN=TSUD_329120 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.0e-15 Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = 0
BLAST of Lag0038343 vs. ExPASy TrEMBL
Match: A0A392M033 (CCHC-type domain-containing protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0001115 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.0e-15 Identity = 47/108 (43.52%), Postives = 67/108 (62.04%), Query Frame = 0
BLAST of Lag0038343 vs. ExPASy TrEMBL
Match: A0A803PUL2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.3e-15 Identity = 48/110 (43.64%), Postives = 62/110 (56.36%), Query Frame = 0
BLAST of Lag0038343 vs. ExPASy TrEMBL
Match: A0A803QC75 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 1.5e-14 Identity = 45/105 (42.86%), Postives = 60/105 (57.14%), Query Frame = 0
BLAST of Lag0038343 vs. ExPASy TrEMBL
Match: A0A392MB81 (Zinc CCHC-type-like protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0005191 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 1.9e-14 Identity = 39/89 (43.82%), Postives = 62/89 (69.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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