Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAAAGAATCAAAGGCAATTGGTCGATCAAGAGTCTTGAAATGAGAGCTGTCTTAGAAGGCCTTAGAAGCTTACCGACGCTTAGAGCCTCTCGCCCGGACCTCTCCATTCCGGCAATTGAGGTCGCCTCTGACGCCGTCGGGGTGATTAATCTGCTGAACCATAAAGAAGCAGACCTTTCGGAGATTTCTTTCTTAGTTGCTGAGATCGAGCTCCTGTCTTCCGAGCTCGACAGCATATCCTTCACGCACTGCCCTCGTTCGCAAAATGAAGAGGCGCACAATTTGGCTCGTTCCGCTGCGTTTAGAATCTCCACTTTTTCTGTAGATTTTTTGGATGCCTCTTCCTCTTCAGAAGACGGTTGTTTTTTGTTCTTGGGTCGGCTGCCGACTTTCTCTCCCCTTTTTTAG mRNA sequence ATGAAAAGAATCAAAGGCAATTGGTCGATCAAGAGTCTTGAAATGAGAGCTGTCTTAGAAGGCCTTAGAAGCTTACCGACGCTTAGAGCCTCTCGCCCGGACCTCTCCATTCCGGCAATTGAGGTCGCCTCTGACGCCGTCGGGGTGATTAATCTGCTGAACCATAAAGAAGCAGACCTTTCGGAGATTTCTTTCTTAGTTGCTGAGATCGAGCTCCTGTCTTCCGAGCTCGACAGCATATCCTTCACGCACTGCCCTCGTTCGCAAAATGAAGAGGCGCACAATTTGGCTCGTTCCGCTGCGTTTAGAATCTCCACTTTTTCTGTAGATTTTTTGGATGCCTCTTCCTCTTCAGAAGACGGTTGTTTTTTGTTCTTGGGTCGGCTGCCGACTTTCTCTCCCCTTTTTTAG Coding sequence (CDS) ATGAAAAGAATCAAAGGCAATTGGTCGATCAAGAGTCTTGAAATGAGAGCTGTCTTAGAAGGCCTTAGAAGCTTACCGACGCTTAGAGCCTCTCGCCCGGACCTCTCCATTCCGGCAATTGAGGTCGCCTCTGACGCCGTCGGGGTGATTAATCTGCTGAACCATAAAGAAGCAGACCTTTCGGAGATTTCTTTCTTAGTTGCTGAGATCGAGCTCCTGTCTTCCGAGCTCGACAGCATATCCTTCACGCACTGCCCTCGTTCGCAAAATGAAGAGGCGCACAATTTGGCTCGTTCCGCTGCGTTTAGAATCTCCACTTTTTCTGTAGATTTTTTGGATGCCTCTTCCTCTTCAGAAGACGGTTGTTTTTTGTTCTTGGGTCGGCTGCCGACTTTCTCTCCCCTTTTTTAG Protein sequence MKRIKGNWSIKSLEMRAVLEGLRSLPTLRASRPDLSIPAIEVASDAVGVINLLNHKEADLSEISFLVAEIELLSSELDSISFTHCPRSQNEEAHNLARSAAFRISTFSVDFLDASSSSEDGCFLFLGRLPTFSPLF
Homology
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR036397 | Ribonuclease H superfamily | GENE3D | 3.30.420.10 | | coord: 1..105
e-value: 7.5E-12
score: 47.4 |
| IPR002156 | Ribonuclease H domain | PFAM | PF13456 | RVT_3 | coord: 3..100
e-value: 8.3E-12
score: 45.0 |
| IPR044730 | Ribonuclease H-like domain, plant type | CDD | cd06222 | RNase_H_like | coord: 9..98
e-value: 6.31049E-14
score: 61.9464 |
| IPR012337 | Ribonuclease H-like superfamily | SUPERFAMILY | 53098 | Ribonuclease H-like | coord: 6..104 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
| molecular_function |
GO:0004523 |
RNA-DNA hybrid ribonuclease activity |
|
