Lag0038232 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0038232
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	L10-interacting MYB domain-containing protein-like
Location	chr2: 14111837 .. 14112594 (+)
RNA-Seq Expression	Lag0038232
Synteny	Lag0038232

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAAGAAGTAGCGAAAGGAAATCGTCCAATTACAACATTTACTAGAACTAGTTGGACTTTTATGAAGAAACAATTATTTGCTAAAACTGGAGACAATTATACCCATGACCAATTGAAGAACAAGTACAACAATCTTAGACGAGTTTATAAAGATTTCAAAAGATTGTTGAGTGATATTACTGGAAAAGGTTGGGATCCAGTGTTGGGGACTATTACTTTGGAAGAGGAGCAGTGGACTAATATTATTAAGGTATCCTTTCTATAACTAATCTCATTAATATTTTGTTACTATCTATAATAAAAAATTTATTAAGATAACTATGTTGGTAAATTTATATAGGTTAACAAGAAAGCTAAGAAGTTAAAAAAAAGTGGTTGTCCACATTATGAGAAGTTGATGAGAATATATGGAGATACAATGACAACTGGTCTCCATATGCTCATCCATCAACAAAACTTCCATCATATTCTGAAGACGAAAACAAAACTGAAAGTGATGCTCCTATGAGTAGTGGAAATAACAAAGATGAAAATCATTGTCAGAGTAGCACGAGCAAGAAGACTAAAAGAAAGAGAGGAGCCTTAAATGATACCATGTCATCTTTCATTGAAGCTTATGTTGAGAGTTCAAAGAGGCGAAATGATATACTTGAAAAAAGACTTCTTGGTTCTTCATCAGTGGACTTTAATGAGACTTCATCAAAAGCAAAAGATTGTGTTGACGAAGACTTGGACAAATGCCTCGAATTTTGA

mRNA sequence

ATGGATGAAGAAGTAGCGAAAGGAAATCGTCCAATTACAACATTTACTAGAACTAGTTGGACTTTTATGAAGAAACAATTATTTGCTAAAACTGGAGACAATTATACCCATGACCAATTGAAGAACAAGTACAACAATCTTAGACGAGTTTATAAAGATTTCAAAAGATTGTTGAGTGATATTACTGGAAAAGGTTGGGATCCAGTGTTGGGGACTATTACTTTGGAAGAGGAGCAGTGGACTAATATTATTAAGAATATATGGAGATACAATGACAACTGGTCTCCATATGCTCATCCATCAACAAAACTTCCATCATATTCTGAAGACGAAAACAAAACTGAAAGTGATGCTCCTATGAGTAGTGGAAATAACAAAGATGAAAATCATTGTCAGAGTAGCACGAGCAAGAAGACTAAAAGAAAGAGAGGAGCCTTAAATGATACCATGTCATCTTTCATTGAAGCTTATGTTGAGAGTTCAAAGAGGCGAAATGATATACTTGAAAAAAGACTTCTTGGTTCTTCATCAGTGGACTTTAATGAGACTTCATCAAAAGCAAAAGATTGTGTTGACGAAGACTTGGACAAATGCCTCGAATTTTGA

Coding sequence (CDS)

ATGGATGAAGAAGTAGCGAAAGGAAATCGTCCAATTACAACATTTACTAGAACTAGTTGGACTTTTATGAAGAAACAATTATTTGCTAAAACTGGAGACAATTATACCCATGACCAATTGAAGAACAAGTACAACAATCTTAGACGAGTTTATAAAGATTTCAAAAGATTGTTGAGTGATATTACTGGAAAAGGTTGGGATCCAGTGTTGGGGACTATTACTTTGGAAGAGGAGCAGTGGACTAATATTATTAAGAATATATGGAGATACAATGACAACTGGTCTCCATATGCTCATCCATCAACAAAACTTCCATCATATTCTGAAGACGAAAACAAAACTGAAAGTGATGCTCCTATGAGTAGTGGAAATAACAAAGATGAAAATCATTGTCAGAGTAGCACGAGCAAGAAGACTAAAAGAAAGAGAGGAGCCTTAAATGATACCATGTCATCTTTCATTGAAGCTTATGTTGAGAGTTCAAAGAGGCGAAATGATATACTTGAAAAAAGACTTCTTGGTTCTTCATCAGTGGACTTTAATGAGACTTCATCAAAAGCAAAAGATTGTGTTGACGAAGACTTGGACAAATGCCTCGAATTTTGA

Protein sequence

MDEEVAKGNRPITTFTRTSWTFMKKQLFAKTGDNYTHDQLKNKYNNLRRVYKDFKRLLSDITGKGWDPVLGTITLEEEQWTNIIKNIWRYNDNWSPYAHPSTKLPSYSEDENKTESDAPMSSGNNKDENHCQSSTSKKTKRKRGALNDTMSSFIEAYVESSKRRNDILEKRLLGSSSVDFNETSSKAKDCVDEDLDKCLEF

Homology

[Close]

BLAST of Lag0038232 vs. NCBI nr
Match: XP_008443406.1 (PREDICTED: uncharacterized protein LOC103487000 isoform X1 [Cucumis melo])

HSP 1 Score: 253.8 bits (647), Expect = 1.2e-63
Identity = 139/224 (62.05%), Postives = 168/224 (75.00%), Query Frame = 0


Query: 1   MDEEVAKGNRPITTFTRTSWTFMKKQLFAKTGDNYTHDQLKNKYNNLRRVYKDFKRLLSD 60
           M++EVAKGNRP TTFT+TSWT++K+QL+ KTG  Y+H+QLKNKYN+LR  YK+FK+LLSD
Sbjct: 59  MEDEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSD 118

Query: 61  ITGKGWDPVLGTITLEEEQWTNII---KNIWRYNDNWSPY------------------AH 120
           I GKGWDPVLGTITL E QWTN+I   KN  ++  +  P+                  A 
Sbjct: 119 INGKGWDPVLGTITLGEAQWTNLIKVNKNAKKFKKSGCPHYGKLMGIYGDTIATTELDAL 178

Query: 121 PSTKLPSYSEDENKTESDAPMSS---GNNKDENHCQSSTSKKTKRKRGALNDTMSSFIEA 180
           PSTKL S SE +NKTESDAPMS+   GNN+DENH QSS SKK+KRKR  +ND MSSF EA
Sbjct: 179 PSTKLSSDSEYDNKTESDAPMSNEDYGNNRDENHGQSSMSKKSKRKREIINDIMSSFKEA 238

Query: 181 YVESSKRRNDILEKRLLGSSSVDFNETSSKAKDCVDEDLDKCLE 201
           YVE+ KRRNDILE RL G SS +F+ETSSKA+D  DEDL+KC++
Sbjct: 239 YVENLKRRNDILEGRLFGLSSGEFSETSSKARDYADEDLNKCIK 282

[Close]

BLAST of Lag0038232 vs. NCBI nr
Match: XP_016899632.1 (PREDICTED: L10-interacting MYB domain-containing protein-like isoform X2 [Cucumis melo])

HSP 1 Score: 253.8 bits (647), Expect = 1.2e-63
Identity = 139/224 (62.05%), Postives = 168/224 (75.00%), Query Frame = 0


Query: 1   MDEEVAKGNRPITTFTRTSWTFMKKQLFAKTGDNYTHDQLKNKYNNLRRVYKDFKRLLSD 60
           M++EVAKGNRP TTFT+TSWT++K+QL+ KTG  Y+H+QLKNKYN+LR  YK+FK+LLSD
Sbjct: 33  MEDEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSD 92

Query: 61  ITGKGWDPVLGTITLEEEQWTNII---KNIWRYNDNWSPY------------------AH 120
           I GKGWDPVLGTITL E QWTN+I   KN  ++  +  P+                  A 
Sbjct: 93  INGKGWDPVLGTITLGEAQWTNLIKVNKNAKKFKKSGCPHYGKLMGIYGDTIATTELDAL 152

Query: 121 PSTKLPSYSEDENKTESDAPMSS---GNNKDENHCQSSTSKKTKRKRGALNDTMSSFIEA 180
           PSTKL S SE +NKTESDAPMS+   GNN+DENH QSS SKK+KRKR  +ND MSSF EA
Sbjct: 153 PSTKLSSDSEYDNKTESDAPMSNEDYGNNRDENHGQSSMSKKSKRKREIINDIMSSFKEA 212

Query: 181 YVESSKRRNDILEKRLLGSSSVDFNETSSKAKDCVDEDLDKCLE 201
           YVE+ KRRNDILE RL G SS +F+ETSSKA+D  DEDL+KC++
Sbjct: 213 YVENLKRRNDILEGRLFGLSSGEFSETSSKARDYADEDLNKCIK 256

[Close]

BLAST of Lag0038232 vs. NCBI nr
Match: XP_038904553.1 (L10-interacting MYB domain-containing protein-like isoform X2 [Benincasa hispida])

HSP 1 Score: 251.1 bits (640), Expect = 7.9e-63
Identity = 137/223 (61.43%), Postives = 166/223 (74.44%), Query Frame = 0


Query: 1   MDEEVAKGNRPITTFTRTSWTFMKKQLFAKTGDNYTHDQLKNKYNNLRRVYKDFKRLLSD 60
           M+EEVAKGNRP TTFT+TSWT++K+QL+ +TG  YTH+QLKNKYN+LR  YK+FKRLL D
Sbjct: 38  MEEEVAKGNRPTTTFTKTSWTYIKEQLYVRTGYAYTHEQLKNKYNSLRHRYKEFKRLLGD 97

Query: 61  ITGKGWDPVLGTITLEEEQWTNII---KNIWRYNDNWSP-----------------YAHP 120
           I GKGWDPVLGTITLEEEQWTN+I   K + ++  +  P                 +A P
Sbjct: 98  INGKGWDPVLGTITLEEEQWTNLIKVNKKVKKFKKSGCPHYDKLMRIYGDTVAAEFHALP 157

Query: 121 STKLPSYSEDENKTESDAPMSS---GNNKDENHCQSSTSKKTKRKRGALNDTMSSFIEAY 180
           S+KL S SE +NKTESD+PM +   GNN+DENH QSS SKK+KRKR  +ND MSSF EAY
Sbjct: 158 SSKLSSDSEYDNKTESDSPMFNEGYGNNRDENHGQSSMSKKSKRKREVINDIMSSFKEAY 217

Query: 181 VESSKRRNDILEKRLLGSSSVDFNETSSKAKDCVDEDLDKCLE 201
           +E+ KRRND+LE R LG SSVD NETSS A+D  DEDL+KC +
Sbjct: 218 IENLKRRNDLLEGRPLGFSSVDVNETSSIARDYGDEDLNKCFK 260

[Close]

BLAST of Lag0038232 vs. NCBI nr
Match: XP_038904554.1 (L10-interacting MYB domain-containing protein-like isoform X3 [Benincasa hispida])

HSP 1 Score: 251.1 bits (640), Expect = 7.9e-63
Identity = 137/223 (61.43%), Postives = 166/223 (74.44%), Query Frame = 0


Query: 1   MDEEVAKGNRPITTFTRTSWTFMKKQLFAKTGDNYTHDQLKNKYNNLRRVYKDFKRLLSD 60
           M+EEVAKGNRP TTFT+TSWT++K+QL+ +TG  YTH+QLKNKYN+LR  YK+FKRLL D
Sbjct: 33  MEEEVAKGNRPTTTFTKTSWTYIKEQLYVRTGYAYTHEQLKNKYNSLRHRYKEFKRLLGD 92

Query: 61  ITGKGWDPVLGTITLEEEQWTNII---KNIWRYNDNWSP-----------------YAHP 120
           I GKGWDPVLGTITLEEEQWTN+I   K + ++  +  P                 +A P
Sbjct: 93  INGKGWDPVLGTITLEEEQWTNLIKVNKKVKKFKKSGCPHYDKLMRIYGDTVAAEFHALP 152

Query: 121 STKLPSYSEDENKTESDAPMSS---GNNKDENHCQSSTSKKTKRKRGALNDTMSSFIEAY 180
           S+KL S SE +NKTESD+PM +   GNN+DENH QSS SKK+KRKR  +ND MSSF EAY
Sbjct: 153 SSKLSSDSEYDNKTESDSPMFNEGYGNNRDENHGQSSMSKKSKRKREVINDIMSSFKEAY 212

Query: 181 VESSKRRNDILEKRLLGSSSVDFNETSSKAKDCVDEDLDKCLE 201
           +E+ KRRND+LE R LG SSVD NETSS A+D  DEDL+KC +
Sbjct: 213 IENLKRRNDLLEGRPLGFSSVDVNETSSIARDYGDEDLNKCFK 255

[Close]

BLAST of Lag0038232 vs. NCBI nr
Match: XP_038904552.1 (L10-interacting MYB domain-containing protein-like isoform X1 [Benincasa hispida])

HSP 1 Score: 251.1 bits (640), Expect = 7.9e-63
Identity = 137/223 (61.43%), Postives = 166/223 (74.44%), Query Frame = 0


Query: 1   MDEEVAKGNRPITTFTRTSWTFMKKQLFAKTGDNYTHDQLKNKYNNLRRVYKDFKRLLSD 60
           M+EEVAKGNRP TTFT+TSWT++K+QL+ +TG  YTH+QLKNKYN+LR  YK+FKRLL D
Sbjct: 59  MEEEVAKGNRPTTTFTKTSWTYIKEQLYVRTGYAYTHEQLKNKYNSLRHRYKEFKRLLGD 118

Query: 61  ITGKGWDPVLGTITLEEEQWTNII---KNIWRYNDNWSP-----------------YAHP 120
           I GKGWDPVLGTITLEEEQWTN+I   K + ++  +  P                 +A P
Sbjct: 119 INGKGWDPVLGTITLEEEQWTNLIKVNKKVKKFKKSGCPHYDKLMRIYGDTVAAEFHALP 178

Query: 121 STKLPSYSEDENKTESDAPMSS---GNNKDENHCQSSTSKKTKRKRGALNDTMSSFIEAY 180
           S+KL S SE +NKTESD+PM +   GNN+DENH QSS SKK+KRKR  +ND MSSF EAY
Sbjct: 179 SSKLSSDSEYDNKTESDSPMFNEGYGNNRDENHGQSSMSKKSKRKREVINDIMSSFKEAY 238

Query: 181 VESSKRRNDILEKRLLGSSSVDFNETSSKAKDCVDEDLDKCLE 201
           +E+ KRRND+LE R LG SSVD NETSS A+D  DEDL+KC +
Sbjct: 239 IENLKRRNDLLEGRPLGFSSVDVNETSSIARDYGDEDLNKCFK 281

[Close]

BLAST of Lag0038232 vs. ExPASy Swiss-Prot
Match: Q9FFJ8 (L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=LIMYB PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.2e-06
Identity = 28/83 (33.73%), Postives = 43/83 (51.81%), Query Frame = 0


Query: 3   EEVAKGNRPITTFTRTSWTFMKKQLFAKTGDNYTHDQLKNKYNNLRRVYKDFKRLLSDIT 62
           +E  KGNRP T F +  W  +   +   TG  YT  QLKN ++  R+ +K + +L+   +
Sbjct: 184 QETLKGNRPDTHFNKEGWKTILGTINENTGLGYTRPQLKNHWDCTRKAWKIWCQLVGASS 243

Query: 63  GKGWDPVLGTITLEEEQWTNIIK 86
            K WDP   +    EE+W   I+
Sbjct: 244 MK-WDPESRSFGATEEEWRIYIR 265

[Close]

BLAST of Lag0038232 vs. ExPASy TrEMBL
Match: A0A1S4DUG7 (L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 5.9e-64
Identity = 139/224 (62.05%), Postives = 168/224 (75.00%), Query Frame = 0


Query: 1   MDEEVAKGNRPITTFTRTSWTFMKKQLFAKTGDNYTHDQLKNKYNNLRRVYKDFKRLLSD 60
           M++EVAKGNRP TTFT+TSWT++K+QL+ KTG  Y+H+QLKNKYN+LR  YK+FK+LLSD
Sbjct: 33  MEDEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSD 92

Query: 61  ITGKGWDPVLGTITLEEEQWTNII---KNIWRYNDNWSPY------------------AH 120
           I GKGWDPVLGTITL E QWTN+I   KN  ++  +  P+                  A 
Sbjct: 93  INGKGWDPVLGTITLGEAQWTNLIKVNKNAKKFKKSGCPHYGKLMGIYGDTIATTELDAL 152

Query: 121 PSTKLPSYSEDENKTESDAPMSS---GNNKDENHCQSSTSKKTKRKRGALNDTMSSFIEA 180
           PSTKL S SE +NKTESDAPMS+   GNN+DENH QSS SKK+KRKR  +ND MSSF EA
Sbjct: 153 PSTKLSSDSEYDNKTESDAPMSNEDYGNNRDENHGQSSMSKKSKRKREIINDIMSSFKEA 212

Query: 181 YVESSKRRNDILEKRLLGSSSVDFNETSSKAKDCVDEDLDKCLE 201
           YVE+ KRRNDILE RL G SS +F+ETSSKA+D  DEDL+KC++
Sbjct: 213 YVENLKRRNDILEGRLFGLSSGEFSETSSKARDYADEDLNKCIK 256

[Close]

BLAST of Lag0038232 vs. ExPASy TrEMBL
Match: A0A1S3B8P1 (uncharacterized protein LOC103487000 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 5.9e-64
Identity = 139/224 (62.05%), Postives = 168/224 (75.00%), Query Frame = 0


Query: 1   MDEEVAKGNRPITTFTRTSWTFMKKQLFAKTGDNYTHDQLKNKYNNLRRVYKDFKRLLSD 60
           M++EVAKGNRP TTFT+TSWT++K+QL+ KTG  Y+H+QLKNKYN+LR  YK+FK+LLSD
Sbjct: 59  MEDEVAKGNRPTTTFTKTSWTYIKEQLYVKTGYAYSHEQLKNKYNSLRHRYKEFKKLLSD 118

Query: 61  ITGKGWDPVLGTITLEEEQWTNII---KNIWRYNDNWSPY------------------AH 120
           I GKGWDPVLGTITL E QWTN+I   KN  ++  +  P+                  A 
Sbjct: 119 INGKGWDPVLGTITLGEAQWTNLIKVNKNAKKFKKSGCPHYGKLMGIYGDTIATTELDAL 178

Query: 121 PSTKLPSYSEDENKTESDAPMSS---GNNKDENHCQSSTSKKTKRKRGALNDTMSSFIEA 180
           PSTKL S SE +NKTESDAPMS+   GNN+DENH QSS SKK+KRKR  +ND MSSF EA
Sbjct: 179 PSTKLSSDSEYDNKTESDAPMSNEDYGNNRDENHGQSSMSKKSKRKREIINDIMSSFKEA 238

Query: 181 YVESSKRRNDILEKRLLGSSSVDFNETSSKAKDCVDEDLDKCLE 201
           YVE+ KRRNDILE RL G SS +F+ETSSKA+D  DEDL+KC++
Sbjct: 239 YVENLKRRNDILEGRLFGLSSGEFSETSSKARDYADEDLNKCIK 282

[Close]

BLAST of Lag0038232 vs. ExPASy TrEMBL
Match: A0A5A7UDA1 (L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007990 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 6.3e-34
Identity = 93/159 (58.49%), Postives = 110/159 (69.18%), Query Frame = 0


Query: 66  WDPVLGTITLEEEQWTNII---KNIWRYNDNWSPY------------------AHPSTKL 125
           WDPVLGTITL E QWTN+I   KN  ++  +  P+                  A PSTKL
Sbjct: 26  WDPVLGTITLGEAQWTNLIKVNKNAKKFKKSGCPHYGKLMGIYGDTIATTELDALPSTKL 85

Query: 126 PSYSEDENKTESDAPMSS---GNNKDENHCQSSTSKKTKRKRGALNDTMSSFIEAYVESS 185
            S SE +NKTESDAPMS+   GNN+DENH QSS SKK+KRKR  +ND MSSF EAYVE+ 
Sbjct: 86  SSDSEYDNKTESDAPMSNEDYGNNRDENHGQSSMSKKSKRKREIINDIMSSFKEAYVENL 145

Query: 186 KRRNDILEKRLLGSSSVDFNETSSKAKDCVDEDLDKCLE 201
           KRRNDILE RL G SS +F+ETSSKA+D  DEDL+KC++
Sbjct: 146 KRRNDILEGRLFGLSSGEFSETSSKARDYADEDLNKCIK 184

[Close]

BLAST of Lag0038232 vs. ExPASy TrEMBL
Match: A0A1S3CFA7 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LOC103500275 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 6.3e-34
Identity = 92/202 (45.54%), Postives = 123/202 (60.89%), Query Frame = 0


Query: 1   MDEEVAKGNRPITTFTRTSWTFMKKQLFAKTGDNYTHDQLKNKYNNLRRVYKDFKRLLSD 60
           MDEEVAKGNRP TTFT+TSW +M+ +L A TG NY+HDQLKNK+N LR++ K FK++LSD
Sbjct: 26  MDEEVAKGNRPTTTFTKTSWNYMRSELNANTGYNYSHDQLKNKFNKLRKICKAFKKILSD 85

Query: 61  ITGKGWDPVLGTITLEEEQWTNIIKNIWRYNDNWSPYAHPSTKLPSYSEDENKTESDAPM 120
           +TG GWDP+ G I                        A PST+L S  EDEN  E+D   
Sbjct: 86  MTGNGWDPLFGVI------------------------ACPSTRLISDFEDEN--ENDVAR 145

Query: 121 SSGNNKDENHCQSSTSKKTKRKRGALNDTMSSFIEAYVESSKRRNDILEKRLLG--SSSV 180
           ++    +EN  +  + K+ +R R   +   S F+  Y E++ R NDILEKR  G  SS V
Sbjct: 146 NTKIGVEEND-KGKSKKRVRRNRDEFDSFFSPFLNIYAENAMRNNDILEKRSFGCTSSEV 200

Query: 181 DFNETSSKAKDCVDEDLDKCLE 201
           D ++TSSK  D + E+L +CL+
Sbjct: 206 DESQTSSKKDDDLHEELMECLD 200

[Close]

BLAST of Lag0038232 vs. ExPASy TrEMBL
Match: A0A1S3CTN1 (uncharacterized protein LOC103504323 OS=Cucumis melo OX=3656 GN=LOC103504323 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 4.4e-27
Identity = 75/175 (42.86%), Postives = 107/175 (61.14%), Query Frame = 0


Query: 23  MKKQLFAKTGDNYTHDQLKNKYNNLRRVYKDFKRLLSDITGKGWDPVLGTITLEEEQWTN 82
           M+ QL A  G NY+HDQLKNK+N LR+ YKDFK++LSD+TG GWDP+LGT+ LE+EQW  
Sbjct: 1   MRSQLIASAGYNYSHDQLKNKFNKLRQTYKDFKKILSDMTGNGWDPLLGTVNLEKEQWNE 60

Query: 83  II---KNIWRYNDNWSPY-----------------AHPSTKLPSYSEDENKTESDAPMSS 142
           +    K   ++  +  P+                 A PST+L S SEDEN  E+D   ++
Sbjct: 61  LFKVNKRAKKFRKSGCPHYEKLIRIFGDTTATGVNACPSTRLISDSEDEN--ENDVASNT 120

Query: 143 GNNKDENHCQSSTSKKTKRKRGALNDTMSSFIEAYVESSKRRNDILEKRLLGSSS 178
               +EN+ +  + K+ +RK+       SSF++ Y E++KR+NDILEKR  G +S
Sbjct: 121 NVGVEENN-KGKSKKRFRRKKDEFGSFFSSFLDVYAENAKRKNDILEKRSFGCTS 172

[Close]

BLAST of Lag0038232 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-08
Identity = 30/83 (36.14%), Postives = 42/83 (50.60%), Query Frame = 0


Query: 3   EEVAKGNRPITTFTRTSWTFMKKQLFAKTGDNYTHDQLKNKYNNLRRVYKDFKRLLSDIT 62
           E+V  GNR   TF  ++W  M     AK G  +  D LKN+Y +LRR+Y D K LL    
Sbjct: 341 EQVNNGNRVGQTFITSAWNEMVTAFNAKFGSQHNKDVLKNRYKHLRRLYNDIKFLLEQ-N 400

Query: 63  GKGWDPVLGTITLEEEQWTNIIK 86
           G  WD     +  +++ W   I+
Sbjct: 401 GFSWDARRDMVIADDDIWNTYIQ 422

[Close]

BLAST of Lag0038232 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-08
Identity = 36/111 (32.43%), Postives = 50/111 (45.05%), Query Frame = 0


Query: 3   EEVAKGNRPITTFTRTSWTFMKKQLFAKTGDNYTHDQLKNKYNNLRRVYKDFKRLLSDIT 62
           E+V  GNR   TF  ++W  M     AK G  +  D LKN+Y +LRR+Y D K LL    
Sbjct: 341 EQVNNGNRVGQTFITSAWNEMVTAFNAKFGSQHNKDVLKNRYKHLRRLYNDIKFLLEQ-N 400

Query: 63  GKGWDPVLGTITLEEEQWTNIIKNIWRYNDNWSPYAHPSTK------LPSY 108
           G  WD     +  +++ W   I+            AHP  +      +PSY
Sbjct: 401 GFSWDARRDMVIADDDIWNTYIQ------------AHPEARSYRVKTIPSY 438

[Close]

BLAST of Lag0038232 vs. TAIR 10
Match: AT5G05800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 6.5e-07
Identity = 28/83 (33.73%), Postives = 43/83 (51.81%), Query Frame = 0


Query: 3   EEVAKGNRPITTFTRTSWTFMKKQLFAKTGDNYTHDQLKNKYNNLRRVYKDFKRLLSDIT 62
           +E  KGNRP T F +  W  +   +   TG  YT  QLKN ++  R+ +K + +L+   +
Sbjct: 184 QETLKGNRPDTHFNKEGWKTILGTINENTGLGYTRPQLKNHWDCTRKAWKIWCQLVGASS 243

Query: 63  GKGWDPVLGTITLEEEQWTNIIK 86
            K WDP   +    EE+W   I+
Sbjct: 244 MK-WDPESRSFGATEEEWRIYIR 265

[Close]

BLAST of Lag0038232 vs. TAIR 10
Match: AT5G05800.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 6.5e-07
Identity = 28/83 (33.73%), Postives = 43/83 (51.81%), Query Frame = 0


Query: 3   EEVAKGNRPITTFTRTSWTFMKKQLFAKTGDNYTHDQLKNKYNNLRRVYKDFKRLLSDIT 62
           +E  KGNRP T F +  W  +   +   TG  YT  QLKN ++  R+ +K + +L+   +
Sbjct: 184 QETLKGNRPDTHFNKEGWKTILGTINENTGLGYTRPQLKNHWDCTRKAWKIWCQLVGASS 243

Query: 63  GKGWDPVLGTITLEEEQWTNIIK 86
            K WDP   +    EE+W   I+
Sbjct: 244 MK-WDPESRSFGATEEEWRIYIR 265

[Close]

BLAST of Lag0038232 vs. TAIR 10
Match: AT3G11290.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11310.1); Has 720 Blast hits to 435 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 32; Plants - 682; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 2.5e-06
Identity = 24/83 (28.92%), Postives = 44/83 (53.01%), Query Frame = 0


Query: 3   EEVAKGNRPITTFTRTSWTFMKKQLFAKTGDNYTHDQLKNKYNNLRRVYKDFKRLLSDIT 62
           +E  KGNRP + + + +W  + + +   TG ++T  QLKN ++  R+ +K + +++    
Sbjct: 182 QEALKGNRPDSHYPKETWKMILETINQNTGKSFTRPQLKNHWDCTRKSWKIWCQVIGAPV 241

Query: 63  GKGWDPVLGTITLEEEQWTNIIK 86
            K WD    T    +E W N +K
Sbjct: 242 MK-WDATSRTFGATDEDWKNYLK 263

The following BLAST results are available for this feature:

BLAST of Lag0038232 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443406.1	1.2e-63	62.05	PREDICTED: uncharacterized protein LOC103487000 isoform X1 [Cucumis melo]	[more]
XP_016899632.1	1.2e-63	62.05	PREDICTED: L10-interacting MYB domain-containing protein-like isoform X2 [Cucumi...	[more]
XP_038904553.1	7.9e-63	61.43	L10-interacting MYB domain-containing protein-like isoform X2 [Benincasa hispida...	[more]
XP_038904554.1	7.9e-63	61.43	L10-interacting MYB domain-containing protein-like isoform X3 [Benincasa hispida...	[more]
XP_038904552.1	7.9e-63	61.43	L10-interacting MYB domain-containing protein-like isoform X1 [Benincasa hispida...	[more]

BLAST of Lag0038232 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFJ8	9.2e-06	33.73	L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Lag0038232 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DUG7	5.9e-64	62.05	L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo OX...	[more]
A0A1S3B8P1	5.9e-64	62.05	uncharacterized protein LOC103487000 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7UDA1	6.3e-34	58.49	L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo va...	[more]
A0A1S3CFA7	6.3e-34	45.54	L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A1S3CTN1	4.4e-27	42.86	uncharacterized protein LOC103504323 OS=Cucumis melo OX=3656 GN=LOC103504323 PE=...	[more]

BLAST of Lag0038232 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24960.1	1.2e-08	36.14	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G24960.2	1.2e-08	32.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G05800.1	6.5e-07	33.73	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G05800.2	6.5e-07	33.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11290.1	2.5e-06	28.92	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 37..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..145
None	No IPR available	PANTHER	PTHR47584:SF14	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 1..187
None	No IPR available	PANTHER	PTHR47584	FAMILY NOT NAMED	coord: 1..187
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 3..82 e-value: 1.1E-14 score: 55.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0038232.1	Lag0038232.1	mRNA