Lag0038177 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0038177
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	E3 ubiquitin-protein ligase
Location	chr2: 13361131 .. 13368544 (+)
RNA-Seq Expression	Lag0038177
Synteny	Lag0038177

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCATTCTGGTTTCTTCCTTGCGGGTCCTTCATTTAATTCTGATGCTACTACTTCTTTCATATCAACTCCGGTGTCTGGAGAAGATGGCGCTACAGCTGATGATATTAGAAACTATACGTCTGATTCCCTCCCCCCTTCTTTCTGGGTTCGAACGGCGATGAAAATATCTAGAGCCAGATGGTTCATTTTCTTGAGAAGAGTTTTCCACTACCAGAACGGATCGAGATCTGATCTTGGACCGAATCCTTTTAATTCGGGTTTGTGGATGGCGATGGAACTTGTCGCTCTGTTGTTTCAGCTAATCATCTCAGTGCTTACTCTTGCCATTTCACAAACTGAGAGGCCAGTCTGGCCTATGAGATTGTGGATAGGTGGTTATGATCTTGGCTGCGTTCTCAGCTTACTGCTTCTCTATGGTCGCCATCGGTATCATAATCTAATACAGGGAGATGGTAACAGTCTTTTGGATATCGAACAGCAGAGGAACAATGATTCATCAAGGTAATCTTAAACATGCTAGTTTCCTCTTAATTGATTTTTAGCTGGAATCATAATCGTGAAATATGTAAGATTCTTAACCTTGTCCTTAGAATGGACAAAGATGCTTATGGTCAATCATGTTCTAACATTCTTTTCCCTTAGTGTTTTGGGGTAAAAATGCATGCAATTCATGAGTTTTTGCTTTGCAATACTCAGAAACTGAGTTGAAGAATAGAAGGTTTTACAATGACCCACAGAATTAAAAGTTCATATATTGTTTGAGTAACTGAATATAAGTCAAAAGCAGACTTGGGAGCTCAACTGAAAGTTGAACCCAATATTTTATTGGGTTGCTTTGTCTTAAACATTCAAAAAGTCTGCATATGCCAAACTTTACTCTTCCTGCTAAACTTTACCTCTAATCTGACTACTTTTATTCAACATAATTCAGGTACTCACATTTGATGAACAAATGCCGCACGTCTCTCGATCTTTTCTTCGCAATATGGTTTGTAATGGGAAATCTTTGGGTCTTCGACTCTCGCTTTGCCTCGTTCCAAAAAGCTCCCAAGCTACATCTACTATGCACCTTCTTGCTAGTTTGGAATGCCATCTGCTACTCTTTCCCATTCATTCTGTTTCTGCTGCTATGTTGCTGTGTGCCACTGATTAGCAGTCTCATAGGATATAACATTAACATGGGATCTACTGAAAAAGGAGCGTTGGACGATCAAATTTCCCAGCTACCTTGCTGGAGATACAAAGCAGTCGAGGCCAACATCAACCCCGGAAATCAACCGGCTAATAACAATACAGGACTTCCAAAAGAGGATCCAGTAAGTAATACCTTTTTGGCTGGTTTAAGAAAAACTACTGAAAGAAAGTCGAAAAAGAACCATTTCTTTTTTGCCCCGATCGATCGAGTAATTAAAATACTTTCTCTTGCCTTTGATTTCTCAGGAATGTTGCATTTGCCTTGCCAAGTATATAGACAAGGAAGAAGTGAGACAGTTGCCTTGTTCCCATGTGTTTCATCTCAAGTGTGTAGATAAGTGGCTTGCTATTACATCTTCATGCCCTCTCTGTAAGCAACAACTTCAAAGATAGAGAGCCATGAAAGCTGCTTTTTGTTTTTCTTTTCATTTTCCTTTTCTTTTGCCCTCCAAAAGAAAATTTTCTCATTTACACTATTTTGTGATTTAGTCATTTAGATTAGAGTCTCTCAACATGGTTACTTGAGTGAGTTCTTGTGCTCACCAGTTACCTAAGTATACTGAAATACTGAATGTTATATACAGCAGGAAAATTATGCCTTATTTGTAGATATTGTGAGAATTATAGTATTTGCCTAATGAATAGAAACCAAGTGTGCTTTTTTTTTTTCTCCACACTTTGTGCCTTGAACTTATTGTTAACGATTTACTGCTGCCCGTTCCCGTTCCCGTTCCCGTCCCCGTCCCGAACCAAACTTGATTATCCGTATAAAATTTGTGTATGGAACAAGAAGAAAACTCGAAAAATCGAACAAGTATGAAGCTTCCTCCTACCTCCACTCTCCTTTGATTAAGATTGTGGTTTCCATTATGTCTCTTGCTTTTTGATGCTCAATGGTGGAACAAAGATTTTTCTATTCTTCCAAGGACATGTTTAGATAGTCACTTCCCAGGAAGACAAAGGTTTTGGTAACGTTTGGGCGAGTCAAAAAGTCAAGTAAGCAATTACCAGTTAAAAGATCCCATTTCATAACTATTTGGTTTCTGAAAATTAAGCGTGTAAATAAACTCTACTTTCGTGTAAGTTTTCTTGTTTTGTTATTTATTTTCTCGGAATGAGAGCGTTAATAAAAGAACTCTGAGCATTCAACTGGTTGAAACATCAAATGAATGTTGTTATGAGAAAATGATATCTCATCTTGAATAGGCACCCTCTCCTTCTCTCCCACCTTCCAAACACAGATTTATCAACTAAGTTAGAACAAGCAATCAATTTCAAGACCAACATTATATATATATATATATATATATATATATATATATATTAATTTACCAAGTTTACTTTTGTTAGTGAAGAAAATACTATAAAGTTTGAATATTGTTTTTTAGTTACTCAATTTTGAAAAGTCTCAAAATCTGACCTTGTTTAATTAGGTAAAATTTCATTGGAAAGCTACAAAAGTTAGATAAATTAGCATAATTTATAAACAAATAATATATATTTTTCTCTCTCTCATTAAATTGAATCTATATAGGCACCTAGTTTTGTTTCATTTTCCTTAATCTTGGAATGTTTTAGGGTTGGTATTGAAATACAATTTTTTTTAGAAAAATAATTTGGTTGGTTTGGTAATGATTTTATCTTTTTATTTTATAAATAAATAAACCATCTTTATCAATCATTTCTTTATTTAAAAAGATTTCATTTTTTAAAGGTGCTTTGGAAGTCATCAACCATTTTTTTCAAATTAAAAAAGAGATCATCAATTTTATTTATTTTTAATTTTGTCCGAGGTTTAGAGTAAAGGGTAAAATTAATCTTTTAAATTGTGATATTAAGACCTAACTAATCTATAAATCATACCAAATTCAACCAATAAAATGTTCAAAAAGTCATATAAATGTCTACAAACCAATAAATATTTGAACCTAGTCACAAAATCAAATAGCTAAAATAGTGCTTAATTTATGTGTCGAAACCCTAAAATTTGGCCAAAGCGAGCTTAGCTCAGCAGTAATTGGCATATTCCCTCGACCAAGAGGTTAGAGGTTCGAATCTCCCACTCCAAATGTTGATATACTAAAAAAAACCCTAAAATTTAATCCAAGAAAAGAGAGAGAGAAAAAAAAAGAGTTTAGTAGGAAAAATTAATCATAAATATTTTTTAAAAAATGAAAAGTCAACAATTGAAAGGTATTTATTCCATTATTTATTTAAAGGTAGAGTTTAGAGTTTAGGGTTTAATGAAACGAGAACTCTAAAGATTAAATTTGATATCCAACTAAATACTAAGAAAAAAAATCTTCTCAAATTATTGATATTTAGATGTAGTATAAAAAATTATAACATAAAATTAAAAATCTTATTGGACTTGGTTAAATTATAAATTTGGTCTCTGCAATTCGAACATAGTTTTTTTTTTTTTTTTTTTTTAGTTCCACAACATTTGGAGTGGGAGAATTCAAACCTCAACTCTTAGTCGAGGATACATGAGTCCTTGTAATTTACGCTTTGTTTTAATTTGATTTCCGTAGTTTGGTTAAGCCTACAAATCTGTTATATTTTTTACTTATTCAAAAAACTCATATATTTTCTTCTACTTTTTACTCCGCCCTAAACCCAAAGTATTGTCGAAGGGAACAAATTAAAACTATTTTTAAATCCTTAAAACCAAATAAAAATACAATCTCAACCCTGTGAATTAAATTTAAAAAAATTAAATCACAGAAAAAAAATTAAAATTATGTCCAAATTATAGGACCAAATTTGTAATTTAGGTCCCGTTTGGAGTTGCGTTTGCCAGCGTAAAAAACGATTTATGGGAGAATCTTAATCTATGGAGAATCACTTTTCAGTTTACTCTACCGCTCTTAGATACCAGCTTTTCTAGAAATCTATCACATTTTCTAACTATTTTTAAATTTCAAATTTATCATTCTTATATATATTTTTACATAGGCTCTTTTTCATATGAATAAAAATTTGATTAATTCAATTTTTATAATAATGATTTTTCTTACATTTTAATCAAATATTTTAGATTAATTAAACATAATGAGATGCAATTTAAATCATACAAACTTTTAAATAATTATCTTATAATAAATTATAAATTAAGTATTAATAAAAAAATATATATATTTGAAATAATAAGCCTACTATGATCCTTATAATTAAATCCCAACAATTTAGTATTAATTTACGGAACTAATTTTTTTCTAATTTAAAATTGAAATTTACCAAACACTATTTTACTCCATTTCAAAGCTGATTTTTCTAAAAGCAAAGTTACCGGTAATTAGTTTAAAAGCTATTACAATCTCAAACTAAGTCGCAAGTTAAAATTCTAGATTAATTGGACACCCACCCATGGTTATTTAATTATGGGGCACAATAATTTTAATCCCATTAAATTTTTAAGAAACAATTAGTTTTTTTAAATAAAATAAAAAAAAAAAAAAGAAAGGAAGAAAAAAGAAAAGAAAAAGAAAAAAAGAAAATTTTGTTATTTTTTTAATTAAAAAATGGTGTGAAGTTTTTGAAAAATGAAAAGCTGTTGAAACTTGAAAGATGGAGGAGGAATTGCGGTTCGACAGTTGAAGGAAACGGTCGATTGTTGGCCTTTGCTTGCTTTCTTAACAAAAACCTGCAACAAAGTTAGGCCAATCCAATCCAATCCAATCCAATCCCTCAAAAACTCTGATTCACTTTCAATCAAAGTTACCCACATTTTCATTTTCATTTTCATTTTCATTTCTCCAGTTGATCTTCAGTCCCCATCTCAATTCCCTCACCTTCCTCTCCTTTTCTCCACCATTTCCGAAAGCTCCCCTTTGCCCATTTCCTTCTATTTACACTTCCATGTCCCCTTTTCCCTCTTTCTTTCCCCTTTTCCTCCATGCCTTTGAGGCTTTTCCAAGTCACCCCTTAAAACCCAACTGCCTGTTCTTCCTGGCTGCCTCTCTCTGTTTCTCTTTTCTCATCTTTTTTGGCTGATGAACTGATGATCTATTGCAAGACAGGTTTTTGATTCCTGGTGCTGGGCTGCGACGGCAGATTAGCTCGGCTGCCGGTGTTTGGAGTAAGTGTTTTGGTTTTTTGCACGGTTGGTGTTTGATGTTTTGTCTAGCTGAATGCCCATGTGGTTGGGGCTTGGAATTTTTATTAATTTGAATACCCAATTTGTGGTTTGTTTCGTTTCAATCATTGTGGGCAAGAGTTCTGTGGTTTTGGTTTTGGCTGTCATGGTTGTCAAGTTGGCTCTTGAATTTCCATGAAAACACTCTGTTTTCTATGTTTGTGCTGAGTCCAAGGTGTTCTTTTGTGTTGTACTAGATAAGGGAAGGTGCTTTTCAATGATCAGTTCTGGTTATTTCGTTTCGGGTCCGATGTGTAACTGCAGTGGCACTGCTTCCTATATCTCAAATTCGTTGGTGGAAGAAGATGGTGTAGGTGCGAATGTTAGAGATGACAATTCTGTTGCTCTCCCTGCATCTTTCTGGGTTAGGATGGCAATGGGAGTGTCTAGAGCCAGGTGGTTCATTTTCTTAAGAAGAGTATTTCACTACCAGAACGGATCGAGATCGGATCTCGGGTCTGATCCTTTCAATTCTAGCTCGTGGATGGCGATGGAGCTGGTAGCTATGGTGTTTCAGTTGGCCATCACCGTGTTTTTTCTTGCCATTTCAAAAACTGAGAAGCCAGTTTGGCCTATGAGACTCTGGATAGTTGGTTATGATCTTGGCTGCGTTCTTAGTTTGTTGCTTCTCTATGGGCGCTATTGGCATCTTTATTTAATGCGTGGCGACCGTGTCAGCCTTTCTGATACTGAGCAGCGGAGGAGCAGTCAAGCATCAAGGTATTCCTTAACATGCTACCTTCTCTATATTAGAGTGGATTAAGCAGCTGAGGGAATGTCTATGTCTATCCTTCTTTTTCGAGTCACTTGGGGGAAGTCTATCTGGTCTTCACTTGTCAATGCTCAAAATTCAATGGAATAAGGTTTATAATCATAACTTTAGCATACGAAATTTAAAATCAATATTCCTTTATAATATTTCAGAACATACCATCGTCAAGTCATAGACTCATAGCTGATTTGGGAAGTTGATTGGAAGTACAAGAGAAAAATGCTGCTTTTGTTGCTTCGTCTAAAAAATTCAGAACTGACTCATTTAGAATGTGGATGCAAAGTTTTCAACTCTATCTACAACTTATGTACAATATGTTGTGCAGGACCTTGCGTTTGATGAACAAATGTCGGTCATCCCTTGAACTCTTCTTTGCAATATGGTTTGTGATGGGTAATGTTTGGATCGTCGACTCTCGCTTCGGTTCTTTCCAAAGAGCTCCCAAGCTTCATCTGTTATGCGTCTTCCTGTTAGTTTGGAATGCCATCTGCTACTCCTTTCCATTCATTCTTTTTCTGCTGCTATGTTGCTGTGTGCCATTGATTAGTAACCTTCTAGGATATAACATTAACATGGCGTTAACCGACAAAGGAGCATCAGATGATCAAATTTCCCAGATACCATGCTGGAGATATAAAGCAAGCTCAAAGCAACCGGATAGCAACAAAGGACTTCCAAAAGAGGATCCAGTAAGTAAAGCATATAATATAGTGAAGGATGACCTTTTTTTCCTCGAAAGAAAGTAGGTTTGGTCAATGTGCTTTTTCTTTTTTGTCCCTGAACTTTTTACCTTTCTATTTTAGTCTCTAAATGTTCCTTTGAAAACTATTTTAGCCCTTTACATTAGCTTCTTCAATGAAAAAACCTTACCAAAACTTAACATAAGTATTTAAAACCATGTTACATGTTAGATGTTGAGTTCTCAGATGTAATTAGGTTTTTCTGTTTGTTATGCAAAATTTAAAGGTTAAACCATTACCAGACTATTTGAAAGTTTACCGACTAAAACAGAGTAGGTATGAAAGTTCGAGGACTAGAATAAGATTTAAACCGAGAAAGTACCTCCTTTATCCGGTGTTTGATCATGAAAATGGAAAAAGAAAGACTAAAAAAAGAAAGTTTCTTCTTCTGAGTTTGTTTTTCTCTGCCATGTTTTAGGAATGCTGCATTTGCCTTGTCAAGTACAGAGATGAAGAAGAAGTAAGACAGTTGCCTTGTTCCCATTTGTTTCATCTCAAGTGTGTAGATAAGTGGCTTGCTATCACATCTTCCTGCCCTCTCTGTAAGCAACAACTTCAAAGATAG

mRNA sequence

ATGATTCATTCTGGTTTCTTCCTTGCGGGTCCTTCATTTAATTCTGATGCTACTACTTCTTTCATATCAACTCCGGTGTCTGGAGAAGATGGCGCTACAGCTGATGATATTAGAAACTATACGTCTGATTCCCTCCCCCCTTCTTTCTGGGTTCGAACGGCGATGAAAATATCTAGAGCCAGATGGTTCATTTTCTTGAGAAGAGTTTTCCACTACCAGAACGGATCGAGATCTGATCTTGGACCGAATCCTTTTAATTCGGGTTTGTGGATGGCGATGGAACTTGTCGCTCTGTTGTTTCAGCTAATCATCTCAGTGCTTACTCTTGCCATTTCACAAACTGAGAGGCCAGTCTGGCCTATGAGATTGTGGATAGGTGGTTATGATCTTGGCTGCGTTCTCAGCTTACTGCTTCTCTATGGTCGCCATCGGTATCATAATCTAATACAGGGAGATGGTAACAGTCTTTTGGATATCGAACAGCAGAGGAACAATGATTCATCAAGGTACTCACATTTGATGAACAAATGCCGCACGTCTCTCGATCTTTTCTTCGCAATATGGTTTGTAATGGGAAATCTTTGGGTCTTCGACTCTCGCTTTGCCTCGTTCCAAAAAGCTCCCAAGCTACATCTACTATGCACCTTCTTGCTAGTTTGGAATGCCATCTGCTACTCTTTCCCATTCATTCTGTTTCTGCTGCTATGTTGCTGTGTGCCACTGATTAGCAGTCTCATAGGATATAACATTAACATGGGATCTACTGAAAAAGGAGCGTTGGACGATCAAATTTCCCAGCTACCTTGCTGGAGATACAAAGCAGTCGAGGCCAACATCAACCCCGGAAATCAACCGGCTAATAACAATACAGGACTTCCAAAAGAGGATCCAGAATGTTGCATTTGCCTTGCCAAGTATATAGACAAGGAAGAAGTGAGACAGTTGCCTTGTTCCCATGTGTTTCATCTCAAGTGTGTAGATAAGTGGCTTGCTATTACATCTTCATGCCCTCTCTTCACTTCCCAGGAAGACAAAGGTTTTGGTAACGTTTGGGCGAGTCAAAAAGTCAAGTTTTTGATTCCTGGTGCTGGGCTGCGACGGCAGATTAGCTCGGCTGCCGGTGTTTGGAATAAGGGAAGGTGCTTTTCAATGATCAGTTCTGGTTATTTCGTTTCGGGTCCGATGTGTAACTGCAGTGGCACTGCTTCCTATATCTCAAATTCGTTGGTGGAAGAAGATGGTGTAGGTGCGAATGTTAGAGATGACAATTCTGTTGCTCTCCCTGCATCTTTCTGGGTTAGGATGGCAATGGGAGTGTCTAGAGCCAGGTGGTTCATTTTCTTAAGAAGAGTATTTCACTACCAGAACGGATCGAGATCGGATCTCGGGTCTGATCCTTTCAATTCTAGCTCGTGGATGGCGATGGAGCTGGTAGCTATGGTGTTTCAGTTGGCCATCACCGTGTTTTTTCTTGCCATTTCAAAAACTGAGAAGCCAGTTTGGCCTATGAGACTCTGGATAGTTGGTTATGATCTTGGCTGCGTTCTTAGTTTGTTGCTTCTCTATGGGCGCTATTGGCATCTTTATTTAATGCGTGGCGACCGTGTCAGCCTTTCTGATACTGAGCAGCGGAGGAGCAGTCAAGCATCAAGGACCTTGCGTTTGATGAACAAATGTCGGTCATCCCTTGAACTCTTCTTTGCAATATGGTTTGTGATGGGTAATGTTTGGATCGTCGACTCTCGCTTCGGTTCTTTCCAAAGAGCTCCCAAGCTTCATCTGTTATGCGTCTTCCTGTTAGTTTGGAATGCCATCTGCTACTCCTTTCCATTCATTCTTTTTCTGCTGCTATGTTGCTGTGTGCCATTGATTAGTAACCTTCTAGGATATAACATTAACATGGCGTTAACCGACAAAGGAGCATCAGATGATCAAATTTCCCAGATACCATGCTGGAGATATAAAGCAAGCTCAAAGCAACCGGATAGCAACAAAGGACTTCCAAAAGAGGATCCAGAATGCTGCATTTGCCTTGTCAAGTACAGAGATGAAGAAGAAGTAAGACAGTTGCCTTGTTCCCATTTGTTTCATCTCAAGTGTGTAGATAAGTGGCTTGCTATCACATCTTCCTGCCCTCTCTGTAAGCAACAACTTCAAAGATAG

Coding sequence (CDS)

ATGATTCATTCTGGTTTCTTCCTTGCGGGTCCTTCATTTAATTCTGATGCTACTACTTCTTTCATATCAACTCCGGTGTCTGGAGAAGATGGCGCTACAGCTGATGATATTAGAAACTATACGTCTGATTCCCTCCCCCCTTCTTTCTGGGTTCGAACGGCGATGAAAATATCTAGAGCCAGATGGTTCATTTTCTTGAGAAGAGTTTTCCACTACCAGAACGGATCGAGATCTGATCTTGGACCGAATCCTTTTAATTCGGGTTTGTGGATGGCGATGGAACTTGTCGCTCTGTTGTTTCAGCTAATCATCTCAGTGCTTACTCTTGCCATTTCACAAACTGAGAGGCCAGTCTGGCCTATGAGATTGTGGATAGGTGGTTATGATCTTGGCTGCGTTCTCAGCTTACTGCTTCTCTATGGTCGCCATCGGTATCATAATCTAATACAGGGAGATGGTAACAGTCTTTTGGATATCGAACAGCAGAGGAACAATGATTCATCAAGGTACTCACATTTGATGAACAAATGCCGCACGTCTCTCGATCTTTTCTTCGCAATATGGTTTGTAATGGGAAATCTTTGGGTCTTCGACTCTCGCTTTGCCTCGTTCCAAAAAGCTCCCAAGCTACATCTACTATGCACCTTCTTGCTAGTTTGGAATGCCATCTGCTACTCTTTCCCATTCATTCTGTTTCTGCTGCTATGTTGCTGTGTGCCACTGATTAGCAGTCTCATAGGATATAACATTAACATGGGATCTACTGAAAAAGGAGCGTTGGACGATCAAATTTCCCAGCTACCTTGCTGGAGATACAAAGCAGTCGAGGCCAACATCAACCCCGGAAATCAACCGGCTAATAACAATACAGGACTTCCAAAAGAGGATCCAGAATGTTGCATTTGCCTTGCCAAGTATATAGACAAGGAAGAAGTGAGACAGTTGCCTTGTTCCCATGTGTTTCATCTCAAGTGTGTAGATAAGTGGCTTGCTATTACATCTTCATGCCCTCTCTTCACTTCCCAGGAAGACAAAGGTTTTGGTAACGTTTGGGCGAGTCAAAAAGTCAAGTTTTTGATTCCTGGTGCTGGGCTGCGACGGCAGATTAGCTCGGCTGCCGGTGTTTGGAATAAGGGAAGGTGCTTTTCAATGATCAGTTCTGGTTATTTCGTTTCGGGTCCGATGTGTAACTGCAGTGGCACTGCTTCCTATATCTCAAATTCGTTGGTGGAAGAAGATGGTGTAGGTGCGAATGTTAGAGATGACAATTCTGTTGCTCTCCCTGCATCTTTCTGGGTTAGGATGGCAATGGGAGTGTCTAGAGCCAGGTGGTTCATTTTCTTAAGAAGAGTATTTCACTACCAGAACGGATCGAGATCGGATCTCGGGTCTGATCCTTTCAATTCTAGCTCGTGGATGGCGATGGAGCTGGTAGCTATGGTGTTTCAGTTGGCCATCACCGTGTTTTTTCTTGCCATTTCAAAAACTGAGAAGCCAGTTTGGCCTATGAGACTCTGGATAGTTGGTTATGATCTTGGCTGCGTTCTTAGTTTGTTGCTTCTCTATGGGCGCTATTGGCATCTTTATTTAATGCGTGGCGACCGTGTCAGCCTTTCTGATACTGAGCAGCGGAGGAGCAGTCAAGCATCAAGGACCTTGCGTTTGATGAACAAATGTCGGTCATCCCTTGAACTCTTCTTTGCAATATGGTTTGTGATGGGTAATGTTTGGATCGTCGACTCTCGCTTCGGTTCTTTCCAAAGAGCTCCCAAGCTTCATCTGTTATGCGTCTTCCTGTTAGTTTGGAATGCCATCTGCTACTCCTTTCCATTCATTCTTTTTCTGCTGCTATGTTGCTGTGTGCCATTGATTAGTAACCTTCTAGGATATAACATTAACATGGCGTTAACCGACAAAGGAGCATCAGATGATCAAATTTCCCAGATACCATGCTGGAGATATAAAGCAAGCTCAAAGCAACCGGATAGCAACAAAGGACTTCCAAAAGAGGATCCAGAATGCTGCATTTGCCTTGTCAAGTACAGAGATGAAGAAGAAGTAAGACAGTTGCCTTGTTCCCATTTGTTTCATCTCAAGTGTGTAGATAAGTGGCTTGCTATCACATCTTCCTGCCCTCTCTGTAAGCAACAACTTCAAAGATAG

Protein sequence

MIHSGFFLAGPSFNSDATTSFISTPVSGEDGATADDIRNYTSDSLPPSFWVRTAMKISRARWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVLTLAISQTERPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHNLIQGDGNSLLDIEQQRNNDSSRYSHLMNKCRTSLDLFFAIWFVMGNLWVFDSRFASFQKAPKLHLLCTFLLVWNAICYSFPFILFLLLCCCVPLISSLIGYNINMGSTEKGALDDQISQLPCWRYKAVEANINPGNQPANNNTGLPKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLFTSQEDKGFGNVWASQKVKFLIPGAGLRRQISSAAGVWNKGRCFSMISSGYFVSGPMCNCSGTASYISNSLVEEDGVGANVRDDNSVALPASFWVRMAMGVSRARWFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELVAMVFQLAITVFFLAISKTEKPVWPMRLWIVGYDLGCVLSLLLLYGRYWHLYLMRGDRVSLSDTEQRRSSQASRTLRLMNKCRSSLELFFAIWFVMGNVWIVDSRFGSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPLISNLLGYNINMALTDKGASDDQISQIPCWRYKASSKQPDSNKGLPKEDPECCICLVKYRDEEEVRQLPCSHLFHLKCVDKWLAITSSCPLCKQQLQR

Homology

[Close]

BLAST of Lag0038177 vs. NCBI nr
Match: KAG7024982.1 (E3 ubiquitin protein ligase RIE1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1125.2 bits (2909), Expect = 0.0e+00
Identity = 569/723 (78.70%), Postives = 603/723 (83.40%), Query Frame = 0


Query: 1   MIHSGFFLAGPSFNSDATTSFISTPVSGEDGATADDIRNYTSDSLPPSFWVRTAMKISRA 60
           MIHSGFFL+GPS NSDATTSFIS PVSG DGA A        D++ PSFWVRTAMK+SRA
Sbjct: 1   MIHSGFFLSGPSLNSDATTSFISIPVSGGDGAMA-------LDAISPSFWVRTAMKVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVLTLAISQTERPVWP 120
           RWFIFLRRVFHYQNGSRSDLGPNPF+SG WM MELVALLFQLIISV+TLAISQTERPVWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFDSGSWMVMELVALLFQLIISVITLAISQTERPVWP 120

Query: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHNLIQGDGNSLLDI--EQQRNNDSSRYSHLMNKCR 180
           MRLWIGGYDLGCVLSLL+LYGRHR H  IQGDGNSL DI  EQQR+N+SSRY  LMNKCR
Sbjct: 121 MRLWIGGYDLGCVLSLLVLYGRHRNHYRIQGDGNSLSDIEHEQQRSNESSRYLQLMNKCR 180

Query: 181 TSLDLFFAIWFVMGNLWVFDSRFASFQKAPKLHLLCTFLLVWNAICYSFPFILFLLLCCC 240
           TSLDLFFAIWFVMGNLWV DSRFASF++APKLHLLC+FLLVWN ICYSFPFILFLLLCCC
Sbjct: 181 TSLDLFFAIWFVMGNLWVLDSRFASFERAPKLHLLCSFLLVWNVICYSFPFILFLLLCCC 240

Query: 241 VPLISSLIGYNINMGSTEKGALDDQISQLPCWRYKAVEANINPGNQPANNNTGLPKEDPE 300
           VPLISSLIGYNINMGSTEKGALDDQISQLP WRY+AV  +INP ++P N+NTGLPK+DPE
Sbjct: 241 VPLISSLIGYNINMGSTEKGALDDQISQLPYWRYRAVHTDINPESRPDNSNTGLPKDDPE 300

Query: 301 CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLFTSQEDKGFGNVWASQKVKF 360
           CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAI SSCPL     D     V    +V F
Sbjct: 301 CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAIASSCPLCLIWTD----TVEKLGRVDF 360

Query: 361 LIPGAGLRRQISSAAGVWNKGRCFSMISSGYFVSGPMCNCSGTASYISNSLVEEDGVGAN 420
                                  FSMI+SGYF+SGP CN +GTAS+ISN LVEEDG GA+
Sbjct: 361 ---------------------ESFSMINSGYFISGPSCNYNGTASFISNLLVEEDGAGAD 420

Query: 421 VRDDNSVALPASFWVRMAMGVSRARWFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELV 480
           VRDDNSV+LPASFWVR+AM VSRARWFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMEL+
Sbjct: 421 VRDDNSVSLPASFWVRVAMRVSRARWFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELI 480

Query: 481 AMVFQLAITVFFLAISKTEKPVWPMRLWIVGYDLGCVLSLLLLYGRYWHLYLMRGDRVSL 540
           AMVFQLAITVFFL IS+TEKPVWPMRLWIVGYDLGCVLSLLLLYGRYWH+YLM   RV L
Sbjct: 481 AMVFQLAITVFFLVISETEKPVWPMRLWIVGYDLGCVLSLLLLYGRYWHVYLM--PRVGL 540

Query: 541 SDTEQRRSSQASRTLRLMNKCRSSLELFFAIWFVMGNVWIVDSRFGSFQRAPKLHLLCVF 600
            D EQRRSSQAS                                     RAPKLHLLCVF
Sbjct: 541 PDIEQRRSSQAS-------------------------------------RAPKLHLLCVF 600

Query: 601 LLVWNAICYSFPFILFLLLCCCVPLISNLLGYNINMALTDKGASDDQISQIPCWRYKASS 660
           LLVWNAICYSFPFILFLLLCCCVPLIS+LLGYNINMA TDKGASDDQIS++PCWRYKASS
Sbjct: 601 LLVWNAICYSFPFILFLLLCCCVPLISSLLGYNINMASTDKGASDDQISELPCWRYKASS 652

Query: 661 KQPDS-NKGLPKEDPECCICLVKYRDEEEVRQLPCSHLFHLKCVDKWLAITSSCPLCKQQ 720
           KQPDS NKGLPKEDPECCICLVKYRDEEEVR+LPCSHLFHLKCVDKWL+ITSSCPLCKQQ
Sbjct: 661 KQPDSNNKGLPKEDPECCICLVKYRDEEEVRELPCSHLFHLKCVDKWLSITSSCPLCKQQ 652

[Close]

BLAST of Lag0038177 vs. NCBI nr
Match: XP_038899145.1 (E3 ubiquitin-protein ligase At4g11680-like [Benincasa hispida])

HSP 1 Score: 654.1 bits (1686), Expect = 1.4e-183
Identity = 313/344 (90.99%), Postives = 324/344 (94.19%), Query Frame = 0


Query: 1   MIHSGFFLAGPSFNSDATTSFISTPVSGEDGATADDIRNYTSDSLPPSFWVRTAMKISRA 60
           MIHSGFFL+GPSFNSD TTSFIS PVSGEDGA AD+I N+TSDS+PPSFWVR AMKISRA
Sbjct: 1   MIHSGFFLSGPSFNSDVTTSFISIPVSGEDGARADEISNHTSDSIPPSFWVRMAMKISRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVLTLAISQTERPVWP 120
           RWFIFLRR+FHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIIS  TLAISQ ERPVWP
Sbjct: 61  RWFIFLRRIFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISAFTLAISQAERPVWP 120

Query: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHNLIQGDGNSLLDI--EQQRNNDSSRYSHLMNKCR 180
           MRLWIGGYDLGCVLSLLLLYGRHRYH L QGDGNSL DI  EQQR+N+SSRYSHLMNKCR
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLTQGDGNSLSDIEHEQQRSNESSRYSHLMNKCR 180

Query: 181 TSLDLFFAIWFVMGNLWVFDSRFASFQKAPKLHLLCTFLLVWNAICYSFPFILFLLLCCC 240
           TSLDLFFAIWFVMGNLWVFDSR ASFQ+APKLHLLC+FLLVWNAICYSFPFILFLLLCCC
Sbjct: 181 TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240

Query: 241 VPLISSLIGYNINMGSTEKGALDDQISQLPCWRYKAVEANINPGNQPANNNTGLPKEDPE 300
           VPL SSLIGYNINMGSTEKGALDDQISQLPCWRYKAVE NINPG+QP N+NTGLPKEDPE
Sbjct: 241 VPLTSSLIGYNINMGSTEKGALDDQISQLPCWRYKAVETNINPGSQPDNSNTGLPKEDPE 300

Query: 301 CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLFTSQ 343
           CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPL   Q
Sbjct: 301 CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQ 344

[Close]

BLAST of Lag0038177 vs. NCBI nr
Match: XP_038897247.1 (E3 ubiquitin-protein ligase At4g11680-like isoform X1 [Benincasa hispida] >XP_038897249.1 E3 ubiquitin-protein ligase At4g11680-like isoform X1 [Benincasa hispida])

HSP 1 Score: 647.5 bits (1669), Expect = 1.3e-181
Identity = 310/344 (90.12%), Postives = 326/344 (94.77%), Query Frame = 0


Query: 377 NKGRCFSMISSGYFVSGPMCNCSGTASYISNSLVEEDGVGANVRDDNSVALPASFWVRMA 436
           +KGR FSMI+SGYFVSGP CNC GTAS+ISNSLVEEDG G +VRDDNSVALPASFWVR+A
Sbjct: 12  DKGRLFSMINSGYFVSGPSCNCGGTASFISNSLVEEDGAGEDVRDDNSVALPASFWVRIA 71

Query: 437 MGVSRARWFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELVAMVFQLAITVFFLAISKT 496
           M VSRARWFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELVAMVFQLAITVFFLAIS+T
Sbjct: 72  MRVSRARWFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELVAMVFQLAITVFFLAISET 131

Query: 497 EKPVWPMRLWIVGYDLGCVLSLLLLYGRYWHLYLMRGDRVSLSDTEQRRSSQASRTLRLM 556
           EKPVWPMRLWIVGYDLGC+LSLLLLYGRYWHLYLMRG+ V L DTEQRRSS+ASR+L LM
Sbjct: 132 EKPVWPMRLWIVGYDLGCILSLLLLYGRYWHLYLMRGEHVGLPDTEQRRSSRASRSLHLM 191

Query: 557 NKCRSSLELFFAIWFVMGNVWIVDSRFGSFQRAPKLHLLCVFLLVWNAICYSFPFILFLL 616
           NKCRSSLELFFAIWFVMGNVWIVDSRF SFQRAPKLHLLCVFLLVWNAICYSFPFILFLL
Sbjct: 192 NKCRSSLELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLL 251

Query: 617 LCCCVPLISNLLGYNINMALTDKGASDDQISQIPCWRYKASSKQPDSNKGLPKEDPECCI 676
           LCCCVPL+S+LLGYNINMA TDKGASDDQISQ+PCWRY   S + DSNKGL KEDPECCI
Sbjct: 252 LCCCVPLVSSLLGYNINMASTDKGASDDQISQLPCWRYNTVSMEADSNKGLRKEDPECCI 311

Query: 677 CLVKYRDEEEVRQLPCSHLFHLKCVDKWLAITSSCPLCKQQLQR 721
           CLVKY+DEEEVRQLPCSHLFHLKCVDKWL+ITSSCPLCKQQLQR
Sbjct: 312 CLVKYKDEEEVRQLPCSHLFHLKCVDKWLSITSSCPLCKQQLQR 355

[Close]

BLAST of Lag0038177 vs. NCBI nr
Match: XP_023534961.1 (E3 ubiquitin-protein ligase At4g11680-like [Cucurbita pepo subsp. pepo] >XP_023534962.1 E3 ubiquitin-protein ligase At4g11680-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 646.7 bits (1667), Expect = 2.3e-181
Identity = 310/338 (91.72%), Postives = 329/338 (97.34%), Query Frame = 0


Query: 384 MISSGYFVSGPMCNCSGTASYISNSLVEEDGVGANVRDDNSVALPASFWVRMAMGVSRAR 443
           MI+SGYF+SGP CN +GTAS+ISNSLVEEDG GA+VRDDNSV+LPASFWVR+AM VSRAR
Sbjct: 1   MINSGYFISGPSCNYNGTASFISNSLVEEDGAGADVRDDNSVSLPASFWVRVAMRVSRAR 60

Query: 444 WFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELVAMVFQLAITVFFLAISKTEKPVWPM 503
           WFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMEL+AMVFQLAITVFFLAIS+TEKPVWPM
Sbjct: 61  WFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELIAMVFQLAITVFFLAISETEKPVWPM 120

Query: 504 RLWIVGYDLGCVLSLLLLYGRYWHLYLMRGDRVSLSDTEQRRSSQASRTLRLMNKCRSSL 563
           RLWIVGYDLGC+LSLLLLYGRYWH+YLMRG+RV L D EQRRSSQASR+LRLMNKCRSSL
Sbjct: 121 RLWIVGYDLGCILSLLLLYGRYWHVYLMRGERVGLPDIEQRRSSQASRSLRLMNKCRSSL 180

Query: 564 ELFFAIWFVMGNVWIVDSRFGSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPL 623
           ELFFAIWFVMGNVWIVDSRFGSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPL
Sbjct: 181 ELFFAIWFVMGNVWIVDSRFGSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPL 240

Query: 624 ISNLLGYNINMALTDKGASDDQISQIPCWRYKASSKQPDS-NKGLPKEDPECCICLVKYR 683
           IS+LLGYNINMA TDKGASDDQIS++PCWRYKASSKQPDS NKGLPKEDPECCICLVKYR
Sbjct: 241 ISSLLGYNINMASTDKGASDDQISELPCWRYKASSKQPDSNNKGLPKEDPECCICLVKYR 300

Query: 684 DEEEVRQLPCSHLFHLKCVDKWLAITSSCPLCKQQLQR 721
           DEEEVR+LPCSHLFHLKCVDKWL+ITSSCPLCKQ+LQR
Sbjct: 301 DEEEVRELPCSHLFHLKCVDKWLSITSSCPLCKQKLQR 338

[Close]

BLAST of Lag0038177 vs. NCBI nr
Match: XP_022139488.1 (E3 ubiquitin-protein ligase At4g11680-like [Momordica charantia])

HSP 1 Score: 639.8 bits (1649), Expect = 2.8e-179
Identity = 310/337 (91.99%), Postives = 320/337 (94.96%), Query Frame = 0


Query: 384 MISSGYFVSGPMCNCSGTASYISNSLVEEDGVGANVRDDNSVALPASFWVRMAMGVSRAR 443
           MISSGYF+SGP+CNC GTAS+ISNSL EEDG  A VRDDNSVALPASFWVR AM VSRAR
Sbjct: 1   MISSGYFISGPLCNCGGTASFISNSLAEEDGAAAVVRDDNSVALPASFWVRTAMRVSRAR 60

Query: 444 WFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELVAMVFQLAITVFFLAISKTEKPVWPM 503
           WF+FLRRVFHYQNGSR+DLGSDPFNSSSWMAMELVAMVFQLAIT FFLAIS+ EKPVWPM
Sbjct: 61  WFVFLRRVFHYQNGSRTDLGSDPFNSSSWMAMELVAMVFQLAITFFFLAISEAEKPVWPM 120

Query: 504 RLWIVGYDLGCVLSLLLLYGRYWHLYLMRGDRVSLSDTEQRRSSQASRTLRLMNKCRSSL 563
           RLWIVGYDLGC LSLLLLYGR+ HLY MRGDRVSLSDTEQRRSSQASR+LRLMNKCRSSL
Sbjct: 121 RLWIVGYDLGCALSLLLLYGRFSHLYPMRGDRVSLSDTEQRRSSQASRSLRLMNKCRSSL 180

Query: 564 ELFFAIWFVMGNVWIVDSRFGSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPL 623
           ELFFAIWFVMGNVWIVDSRF SFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPL
Sbjct: 181 ELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPL 240

Query: 624 ISNLLGYNINMALTDKGASDDQISQIPCWRYKASSKQPDSNKGLPKEDPECCICLVKYRD 683
           IS LLGYNIN A TDKGAS+DQISQ+PCWRYKASSKQ DSNKGLPKEDPECCICLVKYRD
Sbjct: 241 ISGLLGYNINTASTDKGASEDQISQLPCWRYKASSKQLDSNKGLPKEDPECCICLVKYRD 300

Query: 684 EEEVRQLPCSHLFHLKCVDKWLAITSSCPLCKQQLQR 721
           EEEVRQLPCSHLFHLKCVDKWLAITSSCPLCKQQLQR
Sbjct: 301 EEEVRQLPCSHLFHLKCVDKWLAITSSCPLCKQQLQR 337

[Close]

BLAST of Lag0038177 vs. ExPASy Swiss-Prot
Match: Q93Z92 (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.8e-27
Identity = 87/264 (32.95%), Postives = 130/264 (49.24%), Query Frame = 0


Query: 484 LAITVFFLAISKTEKPVWPMRLWIVGYDLGCVLSLLLLYGRYWHLYLMR------GDRVS 543
           +AI V  L +S+ EKP  P+R+W+VGY + C L +  +   Y      R      G  ++
Sbjct: 121 VAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRRHPEDGGGSGLT 180

Query: 544 LSDTEQRRS----SQASRTLRLMNKCRSSLELFFAIWFVMGNVWIVDSRFGSFQRAPKLH 603
            S ++Q  S         T        S+  +F  IW+++G  W+          +P+L+
Sbjct: 181 NSSSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLY 240

Query: 604 LLCVFLLVWN----AICYSFPFILFLLLCCCVPLISNLLGYNINMALTD-KGASDDQISQ 663
            LC+  L ++      C +   ++ L +CCC+P I  +L      A+ D +GAS + I Q
Sbjct: 241 WLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAIL-----YAVADQEGASKNDIDQ 300

Query: 664 IPCWRY-------KASSKQ--------PDS--NKGLPKEDPECCICLVKYRDEEEVRQLP 716
           +P +R+       K S K          DS   + L  ED ECCICL +Y D  E+R+LP
Sbjct: 301 MPKFRFTKTGNVEKLSGKARGIMTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELP 360

[Close]

BLAST of Lag0038177 vs. ExPASy Swiss-Prot
Match: Q9LN71 (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.2e-25
Identity = 82/311 (26.37%), Postives = 144/311 (46.30%), Query Frame = 0


Query: 464 SDPFNSSSWMAMELVAMVFQLAITVFFLAISKTEKPVWPMRLWIVGYDLGCVLSLLLLYG 523
           SD   S   + +++V  +  +++    L +S+ E P+ P+R+W++GY L CVL ++ +  
Sbjct: 92  SDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCV 151

Query: 524 RYWHLYLMRGDRVSLSDTEQRRSSQASRTLRLMNK------------------------- 583
            Y      R +R + +   + RSS +S +   + +                         
Sbjct: 152 EYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSS 211

Query: 584 ----CRSSLELFFAIWFVMGNVWIVDSRFGSFQRAPKLHLLCVFLLVWN----AICYSFP 643
                 S+  +F  IW+++G  W+        Q +P+++ L +  L ++      C +  
Sbjct: 212 VAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALA 271

Query: 644 FILFLLLCCCVPLISNLLGYNINMALTD-KGASDDQISQIPCWRYK----ASSKQPDSNK 703
            ++ + +CCC+P I  +L      A+ D +GAS + I Q+  ++++    A+    D  +
Sbjct: 272 CVIGIAVCCCLPCIIAVL-----YAVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQ 331

Query: 704 G------------------LPKEDPECCICLVKYRDEEEVRQLPCSHLFHLKCVDKWLAI 719
           G                  L +ED ECCICL  Y D  E+R+LPC H FH  CVDKWL I
Sbjct: 332 GTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYI 391

[Close]

BLAST of Lag0038177 vs. ExPASy Swiss-Prot
Match: Q8LDB8 (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 6.4e-25
Identity = 84/308 (27.27%), Postives = 134/308 (43.51%), Query Frame = 0


Query: 464 SDPFNSSSWMAMELVAMVFQLAITVFFLAISKTEKPVWPMRLWIVGYDLGCVLSLLLLYG 523
           SD   S   + ++ V  +  + +    L +S  E P  P+R+WI+GY L C++ ++ +  
Sbjct: 66  SDWAYSKPVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCV 125

Query: 524 RYWHLYLMRGDRVSLSDTEQRRSSQAS---------------RTLRL----------MNK 583
            Y      R   +S   +    SS +S               R L L             
Sbjct: 126 EYRRRNSRRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNSFAKH 185

Query: 584 CRSSLELFFAIWFVMGNVWIVDSRFGSFQRAPKLHLLCVFLLVWN----AICYSFPFILF 643
             S+  +   IW+V+G  W+        Q +P+L+ LC+  L ++      C +   ++ 
Sbjct: 186 LESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIG 245

Query: 644 LLLCCCVPLISNLLGYNINMALTDKGASDDQISQIPCWRYK---------ASSKQPDSNK 703
           + +CCC+P I  +L          +GAS + I Q+  ++++            +Q   + 
Sbjct: 246 IAVCCCLPCIIAVL----YAVAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDS 305

Query: 704 G---------------LPKEDPECCICLVKYRDEEEVRQLPCSHLFHLKCVDKWLAITSS 719
           G               LP ED ECCICL  Y DE E+R+LPC H FH  CVDKWL I ++
Sbjct: 306 GGVMTECGTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINAT 365

[Close]

BLAST of Lag0038177 vs. ExPASy Swiss-Prot
Match: Q8GUU2 (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 4.1e-24
Identity = 77/279 (27.60%), Postives = 122/279 (43.73%), Query Frame = 0


Query: 472 WMAMELVAMVFQLAITVFFLAISKTEKPVWPMRLWIVGYDLGCVLSLLLLYGRYWHLYLM 531
           W A  ++A    L  TV        E+P  P+R+WI  Y L C+  ++L++  YW     
Sbjct: 84  WNAALVLASAVMLVGTV-------EERPNEPIRVWICVYGLQCLFHVVLVWSEYWRRNST 143

Query: 532 RGDR---------VSLSDTEQRRSSQASRTLRLMNKCRSSLELFFAIWFVMGNVWIVDSR 591
           R  R          ++    ++ S   S T   + +C S   +   IW+++G  W+V+  
Sbjct: 144 RRARDLESYDHEDYNIEYDYEQDSDDNSTTYSFVKRCESINTVISFIWWIIGFYWVVEGG 203

Query: 592 FGSFQRAPKLHLLCVFLLV----WNAICYSFPFILFLLLCCCVPLISNLLGYNINMALTD 651
                 AP L+ L V  L     +   C     ++ + LCCC+P I  LL          
Sbjct: 204 DKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCIIALL----YAVAGT 263

Query: 652 KGASDDQISQIPCWRYKASSKQPDSNKG-------------------LPKEDPECCICLV 711
           +G S+ ++  +P +++KA      +  G                   L  ED +CCICL 
Sbjct: 264 EGVSEAELGVLPLYKFKAFHSNEKNITGPGKMVPIPINGLCLATERTLLAEDADCCICLS 323

Query: 712 KYRDEEEVRQLPCSHLFHLKCVDKWLAITSSCPLCKQQL 719
            Y D  E+  LPC+H FH  C+ KWL + ++CPLCK  +
Sbjct: 324 SYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNI 351

[Close]

BLAST of Lag0038177 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.1e-11
Identity = 34/93 (36.56%), Postives = 55/93 (59.14%), Query Frame = 0


Query: 636 LTDKGASDDQISQIPCWRYKASSKQPDSNKGL---------PKEDPECCICLVKYRDEEE 695
           L  +G  +  I  IP +++K   K+ D N G+          K   EC +CL +++DEE+
Sbjct: 94  LRSRGLDESVIRAIPIFKFK---KRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEK 153

Query: 696 VRQLP-CSHLFHLKCVDKWLAITSSCPLCKQQL 719
           +R +P CSHLFH+ C+D WL   ++CPLC+ ++
Sbjct: 154 LRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV 183

[Close]

BLAST of Lag0038177 vs. ExPASy TrEMBL
Match: A0A6J1CFQ6 (E3 ubiquitin-protein ligase At4g11680-like OS=Momordica charantia OX=3673 GN=LOC111010403 PE=4 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 1.4e-179
Identity = 310/337 (91.99%), Postives = 320/337 (94.96%), Query Frame = 0


Query: 384 MISSGYFVSGPMCNCSGTASYISNSLVEEDGVGANVRDDNSVALPASFWVRMAMGVSRAR 443
           MISSGYF+SGP+CNC GTAS+ISNSL EEDG  A VRDDNSVALPASFWVR AM VSRAR
Sbjct: 1   MISSGYFISGPLCNCGGTASFISNSLAEEDGAAAVVRDDNSVALPASFWVRTAMRVSRAR 60

Query: 444 WFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELVAMVFQLAITVFFLAISKTEKPVWPM 503
           WF+FLRRVFHYQNGSR+DLGSDPFNSSSWMAMELVAMVFQLAIT FFLAIS+ EKPVWPM
Sbjct: 61  WFVFLRRVFHYQNGSRTDLGSDPFNSSSWMAMELVAMVFQLAITFFFLAISEAEKPVWPM 120

Query: 504 RLWIVGYDLGCVLSLLLLYGRYWHLYLMRGDRVSLSDTEQRRSSQASRTLRLMNKCRSSL 563
           RLWIVGYDLGC LSLLLLYGR+ HLY MRGDRVSLSDTEQRRSSQASR+LRLMNKCRSSL
Sbjct: 121 RLWIVGYDLGCALSLLLLYGRFSHLYPMRGDRVSLSDTEQRRSSQASRSLRLMNKCRSSL 180

Query: 564 ELFFAIWFVMGNVWIVDSRFGSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPL 623
           ELFFAIWFVMGNVWIVDSRF SFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPL
Sbjct: 181 ELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPL 240

Query: 624 ISNLLGYNINMALTDKGASDDQISQIPCWRYKASSKQPDSNKGLPKEDPECCICLVKYRD 683
           IS LLGYNIN A TDKGAS+DQISQ+PCWRYKASSKQ DSNKGLPKEDPECCICLVKYRD
Sbjct: 241 ISGLLGYNINTASTDKGASEDQISQLPCWRYKASSKQLDSNKGLPKEDPECCICLVKYRD 300

Query: 684 EEEVRQLPCSHLFHLKCVDKWLAITSSCPLCKQQLQR 721
           EEEVRQLPCSHLFHLKCVDKWLAITSSCPLCKQQLQR
Sbjct: 301 EEEVRQLPCSHLFHLKCVDKWLAITSSCPLCKQQLQR 337

[Close]

BLAST of Lag0038177 vs. ExPASy TrEMBL
Match: A0A6J1IFQ4 (E3 ubiquitin-protein ligase At4g11680-like OS=Cucurbita maxima OX=3661 GN=LOC111476537 PE=4 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 4.0e-179
Identity = 307/338 (90.83%), Postives = 326/338 (96.45%), Query Frame = 0


Query: 384 MISSGYFVSGPMCNCSGTASYISNSLVEEDGVGANVRDDNSVALPASFWVRMAMGVSRAR 443
           MI+SGYF+SGP CN +GTAS+ISNSLVEE+G GA+VRDDNSV+LPASFWVR+AM VSRAR
Sbjct: 1   MINSGYFISGPSCNYNGTASFISNSLVEEEGAGADVRDDNSVSLPASFWVRVAMRVSRAR 60

Query: 444 WFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELVAMVFQLAITVFFLAISKTEKPVWPM 503
           WFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMEL+AMV QLAITVFFLAIS+TEKPVWPM
Sbjct: 61  WFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELIAMVLQLAITVFFLAISETEKPVWPM 120

Query: 504 RLWIVGYDLGCVLSLLLLYGRYWHLYLMRGDRVSLSDTEQRRSSQASRTLRLMNKCRSSL 563
           RLWIVGYDLGC+LSLLLLYGRYWH+YLMRG+RV L D EQRRSSQASR+LRLMNKCRSSL
Sbjct: 121 RLWIVGYDLGCILSLLLLYGRYWHVYLMRGERVGLPDIEQRRSSQASRSLRLMNKCRSSL 180

Query: 564 ELFFAIWFVMGNVWIVDSRFGSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPL 623
           ELFFAIWFVMGNVWIVDSRFGSFQRAPKLHLLCVFLLVWNAICYS PFILFLLLCCCVPL
Sbjct: 181 ELFFAIWFVMGNVWIVDSRFGSFQRAPKLHLLCVFLLVWNAICYSCPFILFLLLCCCVPL 240

Query: 624 ISNLLGYNINMALTDKGASDDQISQIPCWRYKASSKQPDS-NKGLPKEDPECCICLVKYR 683
           IS+LLGYNINMA TDKGASDDQIS++PCWRYKASSKQ DS NKGLPKEDPECCICLVKYR
Sbjct: 241 ISSLLGYNINMASTDKGASDDQISELPCWRYKASSKQADSNNKGLPKEDPECCICLVKYR 300

Query: 684 DEEEVRQLPCSHLFHLKCVDKWLAITSSCPLCKQQLQR 721
           DEEEVR+LPCSHLFHLKCVDKWL+ITSSCPLCKQQLQR
Sbjct: 301 DEEEVRELPCSHLFHLKCVDKWLSITSSCPLCKQQLQR 338

[Close]

BLAST of Lag0038177 vs. ExPASy TrEMBL
Match: A0A1S3CI94 (E3 ubiquitin-protein ligase At4g11680 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501269 PE=4 SV=1)

HSP 1 Score: 636.0 bits (1639), Expect = 2.0e-178
Identity = 307/344 (89.24%), Postives = 321/344 (93.31%), Query Frame = 0


Query: 1   MIHSGFFLAGPSFNSDATTSFISTPVSGEDGATADDIRNYTSDSLPPSFWVRTAMKISRA 60
           MIHSGFFL+GPSFNSDATTSFIS  VSGEDGA ADDIRN  SDS+PPSFWV+ AMKISRA
Sbjct: 1   MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVLTLAISQTERPVWP 120
           RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISV TLAISQ E+PVWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP 120

Query: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHNLIQGDGNSLLDI--EQQRNNDSSRYSHLMNKCR 180
           MRLWIGGYDLGCVLSLLLLYGRHRYH L+QG+ N L DI  EQQR+N+SSRYSHLMN+CR
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCR 180

Query: 181 TSLDLFFAIWFVMGNLWVFDSRFASFQKAPKLHLLCTFLLVWNAICYSFPFILFLLLCCC 240
           TSLDLFFAIWFVMGNLWVFDSR ASFQ+APKLHLLC+FLLVWNAICYSFPFILFLLLCCC
Sbjct: 181 TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240

Query: 241 VPLISSLIGYNINMGSTEKGALDDQISQLPCWRYKAVEANINPGNQPANNNTGLPKEDPE 300
           VPLISSL GYNINMGS+EKGA DDQISQLPCWRYKAVEANINP +QP N+NTGL KEDPE
Sbjct: 241 VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPE 300

Query: 301 CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLFTSQ 343
           CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPL   Q
Sbjct: 301 CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQ 344

[Close]

BLAST of Lag0038177 vs. ExPASy TrEMBL
Match: A0A6J1F7G5 (E3 ubiquitin-protein ligase At4g11680-like OS=Cucurbita moschata OX=3662 GN=LOC111442797 PE=4 SV=1)

HSP 1 Score: 628.6 bits (1620), Expect = 3.1e-176
Identity = 306/338 (90.53%), Postives = 323/338 (95.56%), Query Frame = 0


Query: 384 MISSGYFVSGPMCNCSGTASYISNSLVEEDGVGANVRDDNSVALPASFWVRMAMGVSRAR 443
           MI+SGYF+SGP CN +GTAS+ISN  VEEDG GA+VRDDNSV+LPASFWVR+AM VSRAR
Sbjct: 1   MINSGYFISGPPCNYNGTASFISNLSVEEDGAGADVRDDNSVSLPASFWVRVAMRVSRAR 60

Query: 444 WFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELVAMVFQLAITVFFLAISKTEKPVWPM 503
           WFIFLRRVFHYQNGSRS+LGSDPFNSSSWMAMEL+AMVFQLAITVFFLAIS+TEKPVWPM
Sbjct: 61  WFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAMELIAMVFQLAITVFFLAISETEKPVWPM 120

Query: 504 RLWIVGYDLGCVLSLLLLYGRYWHLYLMRGDRVSLSDTEQRRSSQASRTLRLMNKCRSSL 563
           RLWIVGYDLGCVLSLLLLYGRYWH+YLM   RV L D EQRRSSQASR+LRLMNKCRSSL
Sbjct: 121 RLWIVGYDLGCVLSLLLLYGRYWHVYLM--PRVGLPDIEQRRSSQASRSLRLMNKCRSSL 180

Query: 564 ELFFAIWFVMGNVWIVDSRFGSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPL 623
           ELFFAIWFVMGNVWIVDSRF SFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPL
Sbjct: 181 ELFFAIWFVMGNVWIVDSRFDSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPL 240

Query: 624 ISNLLGYNINMALTDKGASDDQISQIPCWRYKASSKQPDS-NKGLPKEDPECCICLVKYR 683
           IS+LLGYNINMA TDKGASDDQIS++PCWRYKASSKQPDS NKGLPKEDPECCICLVKYR
Sbjct: 241 ISSLLGYNINMASTDKGASDDQISELPCWRYKASSKQPDSNNKGLPKEDPECCICLVKYR 300

Query: 684 DEEEVRQLPCSHLFHLKCVDKWLAITSSCPLCKQQLQR 721
           DEEEVR+LPCSHLFHLKCVDKWL+ITSSCPLCKQQLQR
Sbjct: 301 DEEEVRELPCSHLFHLKCVDKWLSITSSCPLCKQQLQR 336

[Close]

BLAST of Lag0038177 vs. ExPASy TrEMBL
Match: A0A0A0K4H0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G278230 PE=4 SV=1)

HSP 1 Score: 624.8 bits (1610), Expect = 4.5e-175
Identity = 303/344 (88.08%), Postives = 315/344 (91.57%), Query Frame = 0


Query: 1   MIHSGFFLAGPSFNSDATTSFISTPVSGEDGATADDIRNYTSDSLPPSFWVRTAMKISRA 60
           MIHSGFFL+GPSFNSDATTSFIS  VS EDGA ADDIRN  SDS+PPSFWV+ AMKISRA
Sbjct: 1   MIHSGFFLSGPSFNSDATTSFISISVSEEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVLTLAISQTERPVWP 120
           RWFIFLRRVFHYQNGSRSDLGPNPFNSG WMAMELVALLFQLIIS  TLAISQ E+PVWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLFQLIISAFTLAISQAEKPVWP 120

Query: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHNLIQGDGNSLLDI--EQQRNNDSSRYSHLMNKCR 180
           MRLWIGGYDLGCVLSLLLLYGRHRYH L+Q DGNSL DI  EQQR N+SSRYSHLMN+CR
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQRDGNSLSDIEHEQQRTNESSRYSHLMNRCR 180

Query: 181 TSLDLFFAIWFVMGNLWVFDSRFASFQKAPKLHLLCTFLLVWNAICYSFPFILFLLLCCC 240
           TSLDLFFAIWFVMGNLW FDSR ASFQ+APKLHLLC+FLLVWNAICYSFPFILFLLLCCC
Sbjct: 181 TSLDLFFAIWFVMGNLWAFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240

Query: 241 VPLISSLIGYNINMGSTEKGALDDQISQLPCWRYKAVEANINPGNQPANNNTGLPKEDPE 300
           VPLISSL GYNIN GSTEKGA DDQISQLPCWRYKAVEANINP +Q  N+NTGL KEDPE
Sbjct: 241 VPLISSLTGYNINTGSTEKGASDDQISQLPCWRYKAVEANINPRSQLDNSNTGLLKEDPE 300

Query: 301 CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLFTSQ 343
           CCICLAKYIDKEEVRQLPCSHVFHL+CVDKWLAITSSCPL   Q
Sbjct: 301 CCICLAKYIDKEEVRQLPCSHVFHLRCVDKWLAITSSCPLCKQQ 344

[Close]

BLAST of Lag0038177 vs. TAIR 10
Match: AT5G55970.1 (RING/U-box superfamily protein )

HSP 1 Score: 421.8 bits (1083), Expect = 1.1e-117
Identity = 197/297 (66.33%), Postives = 240/297 (80.81%), Query Frame = 0


Query: 428 PASFWVRMAMGVSRARWFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELVAMVFQLAIT 487
           P+SF++R+AM VSRARWFIFLRRVFHYQNGSRSDLGS+PFNSS+WM  EL+A++ QL + 
Sbjct: 47  PSSFYIRLAMKVSRARWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMSELIALLVQLTVI 106

Query: 488 VFFLAISKTEKPVWPMRLWIVGYDLGCVLSLLLLYGRYWHLYLMRGDRVSLSDTE-QRRS 547
            F LAISK E+P+WP+RLWI GYD+GC+L+L+LLYGRY  L + +G+   L D E Q+R 
Sbjct: 107 TFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLDINQGNGFVLGDVEQQQRG 166

Query: 548 SQASRTLRLMNKCRSSLELFFAIWFVMGNVWIVDSRFGSFQRAPKLHLLCVFLLVWNAIC 607
            + +R+  LMNKCR+SLELFFAIWFV+GNVW+ DSRFGSF  APKLH+LCV LL WNAIC
Sbjct: 167 REETRSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLAWNAIC 226

Query: 608 YSFPFILFLLLCCCVPLISNLLGYNINMALTDKGASDDQISQIPCWRYKA---SSKQPDS 667
           YSFPF+LFL LCC VPLIS+LLGYN+NM  +D+ ASDDQIS +P W++K    S+   DS
Sbjct: 227 YSFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFKRIDDSASDSDS 286

Query: 668 NKGLPKEDPECCICLVKYRDEEEVRQLPCSHLFHLKCVDKWLAITSSCPLCKQQLQR 721
           +     +DPECCICL KY+D+EEVR+LPCSH FH KCVD+WL I S CPLCKQ L R
Sbjct: 287 DSATVTDDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDLPR 343

[Close]

BLAST of Lag0038177 vs. TAIR 10
Match: AT5G55970.2 (RING/U-box superfamily protein )

HSP 1 Score: 421.8 bits (1083), Expect = 1.1e-117
Identity = 197/297 (66.33%), Postives = 240/297 (80.81%), Query Frame = 0


Query: 428 PASFWVRMAMGVSRARWFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELVAMVFQLAIT 487
           P+SF++R+AM VSRARWFIFLRRVFHYQNGSRSDLGS+PFNSS+WM  EL+A++ QL + 
Sbjct: 47  PSSFYIRLAMKVSRARWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMSELIALLVQLTVI 106

Query: 488 VFFLAISKTEKPVWPMRLWIVGYDLGCVLSLLLLYGRYWHLYLMRGDRVSLSDTE-QRRS 547
            F LAISK E+P+WP+RLWI GYD+GC+L+L+LLYGRY  L + +G+   L D E Q+R 
Sbjct: 107 TFTLAISKEERPIWPVRLWITGYDVGCLLNLMLLYGRYRQLDINQGNGFVLGDVEQQQRG 166

Query: 548 SQASRTLRLMNKCRSSLELFFAIWFVMGNVWIVDSRFGSFQRAPKLHLLCVFLLVWNAIC 607
            + +R+  LMNKCR+SLELFFAIWFV+GNVW+ DSRFGSF  APKLH+LCV LL WNAIC
Sbjct: 167 REETRSSHLMNKCRTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLAWNAIC 226

Query: 608 YSFPFILFLLLCCCVPLISNLLGYNINMALTDKGASDDQISQIPCWRYKA---SSKQPDS 667
           YSFPF+LFL LCC VPLIS+LLGYN+NM  +D+ ASDDQIS +P W++K    S+   DS
Sbjct: 227 YSFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFKRIDDSASDSDS 286

Query: 668 NKGLPKEDPECCICLVKYRDEEEVRQLPCSHLFHLKCVDKWLAITSSCPLCKQQLQR 721
           +     +DPECCICL KY+D+EEVR+LPCSH FH KCVD+WL I S CPLCKQ L R
Sbjct: 287 DSATVTDDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDLPR 343

[Close]

BLAST of Lag0038177 vs. TAIR 10
Match: AT4G26580.1 (RING/U-box superfamily protein )

HSP 1 Score: 406.0 bits (1042), Expect = 6.4e-113
Identity = 201/330 (60.91%), Postives = 248/330 (75.15%), Query Frame = 0


Query: 12  SFNSDATTSFISTPVSGEDGATADDIRNYTSDSLP-PSFWVRTAMKISRARWFIFLRRVF 71
           S    +++SF ST +        DD  +   +S P  SF++R AM++SRARWFIFLRRVF
Sbjct: 16  SITVSSSSSFASTQL--------DDNTHTAPESSPSSSFFMRLAMRVSRARWFIFLRRVF 75

Query: 72  HYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVLTLAISQTERPVWPMRLWIGGYDL 131
           HYQN SRSDLG NPFNS  WM  EL+ALL Q+ +   TLA+S+ ERPVWPMRLWI GY++
Sbjct: 76  HYQNASRSDLGTNPFNSIAWMVSELIALLLQITVITSTLALSKNERPVWPMRLWITGYNV 135

Query: 132 GCVLSLLLLYGRHRYHNLIQGDGNSLLDIEQQRNN--DSSRYSHLMNKCRTSLDLFFAIW 191
           GC+L+L+LLYGR+R  +    +  S  DIEQQ+ +  +++R SHLMNKCRTSL+LFFAIW
Sbjct: 136 GCLLNLMLLYGRYRQQDTSHENAFSFGDIEQQQRSREETTRCSHLMNKCRTSLELFFAIW 195

Query: 192 FVMGNLWVFDSRFASFQKAPKLHLLCTFLLVWNAICYSFPFILFLLLCCCVPLISSLIGY 251
           FV+GN+WVFDSRF SF  AP LH+LC  LL WNA+CYSFPF+LFLLLCC VPL+SS +GY
Sbjct: 196 FVIGNVWVFDSRFGSFHYAPILHVLCISLLAWNALCYSFPFLLFLLLCCVVPLVSSFLGY 255

Query: 252 NINMGSTEKGALDDQISQLPCWRYKAVEANINPGNQPANNNTGLPKEDPECCICLAKYID 311
           N+N+GS+EKGA DDQIS LP W+YK ++   +  +  ANN       DPECCICLAKY +
Sbjct: 256 NMNVGSSEKGASDDQISSLPSWKYKLIDETSD--SSQANN-------DPECCICLAKYKE 315

Query: 312 KEEVRQLPCSHVFHLKCVDKWLAITSSCPL 339
           KEEVR+LPCSH FHLKCVD+WL I S CPL
Sbjct: 316 KEEVRKLPCSHRFHLKCVDQWLRIISCCPL 328

[Close]

BLAST of Lag0038177 vs. TAIR 10
Match: AT4G26580.2 (RING/U-box superfamily protein )

HSP 1 Score: 406.0 bits (1042), Expect = 6.4e-113
Identity = 201/330 (60.91%), Postives = 248/330 (75.15%), Query Frame = 0


Query: 12  SFNSDATTSFISTPVSGEDGATADDIRNYTSDSLP-PSFWVRTAMKISRARWFIFLRRVF 71
           S    +++SF ST +        DD  +   +S P  SF++R AM++SRARWFIFLRRVF
Sbjct: 16  SITVSSSSSFASTQL--------DDNTHTAPESSPSSSFFMRLAMRVSRARWFIFLRRVF 75

Query: 72  HYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVLTLAISQTERPVWPMRLWIGGYDL 131
           HYQN SRSDLG NPFNS  WM  EL+ALL Q+ +   TLA+S+ ERPVWPMRLWI GY++
Sbjct: 76  HYQNASRSDLGTNPFNSIAWMVSELIALLLQITVITSTLALSKNERPVWPMRLWITGYNV 135

Query: 132 GCVLSLLLLYGRHRYHNLIQGDGNSLLDIEQQRNN--DSSRYSHLMNKCRTSLDLFFAIW 191
           GC+L+L+LLYGR+R  +    +  S  DIEQQ+ +  +++R SHLMNKCRTSL+LFFAIW
Sbjct: 136 GCLLNLMLLYGRYRQQDTSHENAFSFGDIEQQQRSREETTRCSHLMNKCRTSLELFFAIW 195

Query: 192 FVMGNLWVFDSRFASFQKAPKLHLLCTFLLVWNAICYSFPFILFLLLCCCVPLISSLIGY 251
           FV+GN+WVFDSRF SF  AP LH+LC  LL WNA+CYSFPF+LFLLLCC VPL+SS +GY
Sbjct: 196 FVIGNVWVFDSRFGSFHYAPILHVLCISLLAWNALCYSFPFLLFLLLCCVVPLVSSFLGY 255

Query: 252 NINMGSTEKGALDDQISQLPCWRYKAVEANINPGNQPANNNTGLPKEDPECCICLAKYID 311
           N+N+GS+EKGA DDQIS LP W+YK ++   +  +  ANN       DPECCICLAKY +
Sbjct: 256 NMNVGSSEKGASDDQISSLPSWKYKLIDETSD--SSQANN-------DPECCICLAKYKE 315

Query: 312 KEEVRQLPCSHVFHLKCVDKWLAITSSCPL 339
           KEEVR+LPCSH FHLKCVD+WL I S CPL
Sbjct: 316 KEEVRKLPCSHRFHLKCVDQWLRIISCCPL 328

[Close]

BLAST of Lag0038177 vs. TAIR 10
Match: AT1G80400.1 (RING/U-box superfamily protein )

HSP 1 Score: 195.7 bits (496), Expect = 1.3e-49
Identity = 107/311 (34.41%), Postives = 169/311 (54.34%), Query Frame = 0


Query: 74  NGSRSDLGPNPFNSGLWMAMELVALLFQLIISVLTLAISQTERPVWPMRLWIGGYDLGCV 133
           NG R+    +P NSGLW+++ELV  + Q++ +++ + +++ E P  P+  W+ GY  GC+
Sbjct: 92  NGRRT---RSPLNSGLWISVELVVTVAQIVAAIVVMVLAKDEHPEAPLFTWVIGYTCGCL 151

Query: 134 LSLLLLYGRHRYHNLIQGDGNSLLDIEQQRNNDSSRY----------------------- 193
            +L +LY R R +N   G  +S      Q N++S+ Y                       
Sbjct: 152 ATLPILYWRFRTYNRATGQDSSQRATSSQGNSESTPYTAVSVAQAADEENSTGVSAAPRN 211

Query: 194 -----------SHLMNKCRTSLDLFFAIWFVMGNLWVFDSRFASFQKAPKLHLLCTFLLV 253
                      + L++  + ++D FFA+WFV+GN+W+F    +S   +PKL+ LC   L 
Sbjct: 212 NQVGESLRTRLNGLVDHFKMAIDCFFAVWFVVGNVWIFGGH-SSPSDSPKLYRLCIAFLT 271

Query: 254 WNAICYSFPFILFLLLCCCVPLISSLIGYNINMGSTEKGALDDQISQLPCWRYKAVEAN- 313
           ++ I Y+ PFIL   +CCC+P + S++G+  N   T +GA  + I+ LP +R+K+   N 
Sbjct: 272 FSCIGYAMPFILCATICCCLPCLISVLGFRENFSQT-RGATAEAINALPVYRFKSKSRND 331

Query: 314 -----------INPGNQPANNNTGLPKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVD 339
                      +  G+Q     +G   ED  CCICL +Y D E+VR+LPCSHVFH+ CVD
Sbjct: 332 LEFSEEGEGGFLLLGSQKKRLISG---EDASCCICLTRYGDDEQVRELPCSHVFHVDCVD 391

The following BLAST results are available for this feature:

BLAST of Lag0038177 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024982.1	0.0e+00	78.70	E3 ubiquitin protein ligase RIE1, partial [Cucurbita argyrosperma subsp. argyros...	[more]
XP_038899145.1	1.4e-183	90.99	E3 ubiquitin-protein ligase At4g11680-like [Benincasa hispida]	[more]
XP_038897247.1	1.3e-181	90.12	E3 ubiquitin-protein ligase At4g11680-like isoform X1 [Benincasa hispida] >XP_03...	[more]
XP_023534961.1	2.3e-181	91.72	E3 ubiquitin-protein ligase At4g11680-like [Cucurbita pepo subsp. pepo] >XP_0235...	[more]
XP_022139488.1	2.8e-179	91.99	E3 ubiquitin-protein ligase At4g11680-like [Momordica charantia]	[more]

BLAST of Lag0038177 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93Z92	1.8e-27	32.95	E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g116...	[more]
Q9LN71	2.2e-25	26.37	E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g127...	[more]
Q8LDB8	6.4e-25	27.27	E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g631...	[more]
Q8GUU2	4.1e-24	27.60	E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV...	[more]
Q9LSW9	3.1e-11	36.56	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]

BLAST of Lag0038177 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CFQ6	1.4e-179	91.99	E3 ubiquitin-protein ligase At4g11680-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1IFQ4	4.0e-179	90.83	E3 ubiquitin-protein ligase At4g11680-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A1S3CI94	2.0e-178	89.24	E3 ubiquitin-protein ligase At4g11680 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1F7G5	3.1e-176	90.53	E3 ubiquitin-protein ligase At4g11680-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A0A0K4H0	4.5e-175	88.08	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G278230 P...	[more]

BLAST of Lag0038177 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55970.1	1.1e-117	66.33	RING/U-box superfamily protein	[more]
AT5G55970.2	1.1e-117	66.33	RING/U-box superfamily protein	[more]
AT4G26580.1	6.4e-113	60.91	RING/U-box superfamily protein	[more]
AT4G26580.2	6.4e-113	60.91	RING/U-box superfamily protein	[more]
AT1G80400.1	1.3e-49	34.41	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 674..714 e-value: 1.6E-6 score: 37.7 coord: 299..339 e-value: 3.4E-4 score: 29.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 673..715 e-value: 2.6E-12 score: 46.9 coord: 298..338 e-value: 2.5E-11 score: 43.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 299..338 score: 10.92546
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 674..715 score: 12.54829
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 630..719 e-value: 7.3E-20 score: 72.4 coord: 249..343 e-value: 2.3E-16 score: 61.2
None	No IPR available	PANTHER	PTHR46225	C3H4 TYPE ZINC FINGER PROTEIN	coord: 408..719
None	No IPR available	PANTHER	PTHR46225	C3H4 TYPE ZINC FINGER PROTEIN	coord: 33..339
None	No IPR available	PANTHER	PTHR46225:SF1	RING/U-BOX SUPERFAMILY PROTEIN	coord: 33..339 coord: 408..719
None	No IPR available	CDD	cd16474	RING-H2_RNF111_like	coord: 672..715 e-value: 3.0489E-19 score: 79.6629
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 294..338
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 673..718

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0038177.1	Lag0038177.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding