Lag0038070 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0038070
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	GrpE protein homolog
Location	chr2: 12216679 .. 12218247 (+)
RNA-Seq Expression	Lag0038070
Synteny	Lag0038070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTATGTTAAAGTATTGATATAAGATCAAACTTATCATAACCCATCAGCTTAATCTTTTGGGTTGATTGGTGAAACCATTTTTTTTTTTCTTCTCCCTAGCTTGCTTGTTTTAGGATTCAAGGTTGTTTTTCCTGTTACTGATTTAATGCTTCATCTTCCAGGTGTCTCAATTTCATCATATAGTGAATCCATTCCTCTCCCAAAAGTTTGGAGTATCTTCTTCTTCTGCTTCCCATGACTCTTCTGAAAATGAAGAGGGGAGTGCCAAACAAAGTAATAGTGATCCTGCAAGAGATGAGAATTTAAAAGTTTCTGAACAAGTAGAGGAATCAAATTCTAGGTTGAACTCTCATTCCACTGAATCAAAATCAAGACGGCGCAGTAGGCGCACCATACGAACTGCATTTTCTGATTCGGATTCCGAGAGTGATGAACAACCTTCCATGGATGGTCTAGTGAAATCTCTGGCGGAGAAGGAAGAGCTTTTGAAGGCTAAGCACAAAGAGATTGAGATAATGCAAGACAAAGTGCTCCGTTCTTATGCAGAAATGGAGAATGTTATGGACAGGACAAGACGTGAAGCAGAGAATTCAAAGAAGTTTGCCATTCAGGTTTCTTGAGTTGACATTTCTCCTAATGATATATATATGTTCTTGTTTCTTTCTCAAACTCGGGTTTCGTTCCAATGTTCTGCTTGTTCAACATGAACTTATATGTCTTTGCATATGCTTTACAGAATTTTGCAAAGAGTTTGCTTGATGTTGCTGACAACTTGGGAAGAGCTTCTTCTGTGGTTAAAGACAGTTTCTCAAAAGTTAATGAATCTGAGGATTCAATTGGAGCTGTACCTCTCCTAAAAACCCTTCTAGAAGGGGTCGACATGACCGAGAAACAGCTTATGGAGGTAAATTTTGTATGTTAGCATAAGCTATTCAACATTTCAAGAAGAAATCACAAGTTAAATCTATTGTTCTGATGCTTAAACACACTTTTTCAACAGGTATTTAAGAAGTCCGGGGTAGAGAAAGTTGACCCTACGAACGAGCCGTTCGATCCGCATAAGCATAATGCAGTATTCCAAATACCAGATGGATCTAAGCCAGAGGGCACTGTTGCTATTGTCCTGAAGGTATTAATTCTATTTGCCATCATGCTTTCTTCATACTTCTGAAATGTGTGTGCTTCAAAAACTATGTGACAGTTAGTTCTTATGCCAAGCAAAATTCATTGACCAAACTTTAGGGGGAGAGTTTTCTTTTAGAGCAAGCTATAAACAAAGTTAGCACTTTTTAAGTTTGATCTTTACTCTTTAAACAAAGTTAGCACTTTTTAAGTTTGATCTTTACTCTTTAGTAGGAGCAGCCATGTTTTTTTACATTGTAACAAATATTTCCCTCCAACTTTTTTCAAGAACATGAAATCATCACTGATTTGTTGTGGAGATGATATGATTTTCTCATGTTCTCTATGACAGTCTGGATATATGCTATACGATCGAGTTCTTCGGCCAGCTGAAGTCGGTGTGACCCAAGCCTTGGAAAATAGTTCGATCGATAATGTCTAA

mRNA sequence

ATGTTTTATGTTAAAGTGTCTCAATTTCATCATATAGTGAATCCATTCCTCTCCCAAAAGTTTGGAGTATCTTCTTCTTCTGCTTCCCATGACTCTTCTGAAAATGAAGAGGGGAGTGCCAAACAAAGTAATAGTGATCCTGCAAGAGATGAGAATTTAAAAGTTTCTGAACAAGTAGAGGAATCAAATTCTAGGTTGAACTCTCATTCCACTGAATCAAAATCAAGACGGCGCAGTAGGCGCACCATACGAACTGCATTTTCTGATTCGGATTCCGAGAGTGATGAACAACCTTCCATGGATGGTCTAGTGAAATCTCTGGCGGAGAAGGAAGAGCTTTTGAAGGCTAAGCACAAAGAGATTGAGATAATGCAAGACAAAGTGCTCCGTTCTTATGCAGAAATGGAGAATGTTATGGACAGGACAAGACGTGAAGCAGAGAATTCAAAGAAGTTTGCCATTCAGAATTTTGCAAAGAGTTTGCTTGATGTTGCTGACAACTTGGGAAGAGCTTCTTCTGTGGTTAAAGACAGTTTCTCAAAAGTTAATGAATCTGAGGATTCAATTGGAGCTGTACCTCTCCTAAAAACCCTTCTAGAAGGGGTCGACATGACCGAGAAACAGCTTATGGAGGTATTTAAGAAGTCCGGGGTAGAGAAAGTTGACCCTACGAACGAGCCGTTCGATCCGCATAAGCATAATGCAGTATTCCAAATACCAGATGGATCTAAGCCAGAGGGCACTGTTGCTATTGTCCTGAAGTCTGGATATATGCTATACGATCGAGTTCTTCGGCCAGCTGAAGTCGGTGTGACCCAAGCCTTGGAAAATAGTTCGATCGATAATGTCTAA

Coding sequence (CDS)

ATGTTTTATGTTAAAGTGTCTCAATTTCATCATATAGTGAATCCATTCCTCTCCCAAAAGTTTGGAGTATCTTCTTCTTCTGCTTCCCATGACTCTTCTGAAAATGAAGAGGGGAGTGCCAAACAAAGTAATAGTGATCCTGCAAGAGATGAGAATTTAAAAGTTTCTGAACAAGTAGAGGAATCAAATTCTAGGTTGAACTCTCATTCCACTGAATCAAAATCAAGACGGCGCAGTAGGCGCACCATACGAACTGCATTTTCTGATTCGGATTCCGAGAGTGATGAACAACCTTCCATGGATGGTCTAGTGAAATCTCTGGCGGAGAAGGAAGAGCTTTTGAAGGCTAAGCACAAAGAGATTGAGATAATGCAAGACAAAGTGCTCCGTTCTTATGCAGAAATGGAGAATGTTATGGACAGGACAAGACGTGAAGCAGAGAATTCAAAGAAGTTTGCCATTCAGAATTTTGCAAAGAGTTTGCTTGATGTTGCTGACAACTTGGGAAGAGCTTCTTCTGTGGTTAAAGACAGTTTCTCAAAAGTTAATGAATCTGAGGATTCAATTGGAGCTGTACCTCTCCTAAAAACCCTTCTAGAAGGGGTCGACATGACCGAGAAACAGCTTATGGAGGTATTTAAGAAGTCCGGGGTAGAGAAAGTTGACCCTACGAACGAGCCGTTCGATCCGCATAAGCATAATGCAGTATTCCAAATACCAGATGGATCTAAGCCAGAGGGCACTGTTGCTATTGTCCTGAAGTCTGGATATATGCTATACGATCGAGTTCTTCGGCCAGCTGAAGTCGGTGTGACCCAAGCCTTGGAAAATAGTTCGATCGATAATGTCTAA

Protein sequence

MFYVKVSQFHHIVNPFLSQKFGVSSSSASHDSSENEEGSAKQSNSDPARDENLKVSEQVEESNSRLNSHSTESKSRRRSRRTIRTAFSDSDSESDEQPSMDGLVKSLAEKEELLKAKHKEIEIMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKVNESEDSIGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKVDPTNEPFDPHKHNAVFQIPDGSKPEGTVAIVLKSGYMLYDRVLRPAEVGVTQALENSSIDNV

Homology

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BLAST of Lag0038070 vs. NCBI nr
Match: XP_022139414.1 (uncharacterized protein LOC111010351 [Momordica charantia])

HSP 1 Score: 404.4 bits (1038), Expect = 7.8e-109
Identity = 229/286 (80.07%), Postives = 252/286 (88.11%), Query Frame = 0


Query: 4   VKVSQFHHIV-NPFLSQKFGVSSSSASHDSSENEEGSAKQSNS-----DPARDENLKVSE 63
           V+VS  HHIV NPF  QKFG+SS++ SH+SSEN+EGSAKQS +     DP +DEN +VS+
Sbjct: 40  VQVSLLHHIVFNPFPFQKFGISSTT-SHESSENKEGSAKQSKNYSTTKDPTKDENSEVSD 99

Query: 64  QVEESNSRLNSHSTESKSRRRSRRTIRTAFSDSDSESDEQPSMDGLVKSLAEKEELLKAK 123
           Q  E NS  NSHST+SKSR+  RRTIRTAFSDSDSE  EQPSMD LVKSLA KEELLK+K
Sbjct: 100 QAGELNSTSNSHSTKSKSRQWRRRTIRTAFSDSDSEGCEQPSMDDLVKSLARKEELLKSK 159

Query: 124 HKEIEIMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKD 183
           HKEI+ MQDKVLRSYAEMENV DRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKD
Sbjct: 160 HKEIKKMQDKVLRSYAEMENVKDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKD 219

Query: 184 SFSKVNESEDSIGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKVDPTNEPFDPHKHNAVF 243
           SFSK+ ESEDS GAVPLLKTLLEGVDMTEKQL++VFKKSGVEK DPT+EPFDPH+HNAVF
Sbjct: 220 SFSKIKESEDSSGAVPLLKTLLEGVDMTEKQLVQVFKKSGVEKFDPTSEPFDPHRHNAVF 279

Query: 244 QIPDGSKPEGTVAIVLKSGYMLYDRVLRPAEVGVTQALENSSIDNV 284
           QI DGSKP+GTVAIVLKSGYMLYDRVLRPAEVGVT+A E++  DNV
Sbjct: 280 QISDGSKPDGTVAIVLKSGYMLYDRVLRPAEVGVTRAAESNPSDNV 324

[Close]

BLAST of Lag0038070 vs. NCBI nr
Match: XP_022936267.1 (grpE protein homolog 2, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 394.4 bits (1012), Expect = 8.1e-106
Identity = 225/279 (80.65%), Postives = 246/279 (88.17%), Query Frame = 0


Query: 4   VKVSQFHHIV-NPFLSQKFGVSSSSASHDSSENEEGSAKQSNSDPARDENLKVSEQVEES 63
           V VS  +HIV NPF  Q+FGV SS+ASH+SSENEEGSAKQ       D N +VS Q EE 
Sbjct: 53  VHVSLLNHIVSNPFPFQRFGV-SSTASHESSENEEGSAKQD------DVNSEVSNQAEEL 112

Query: 64  NSRLNSHSTESKSRRRSRRTIRTAFSDSDSESDEQPSMDGLVKSLAEKEELLKAKHKEIE 123
           +S  +SHST+SKSRR+ RRTIRTAFSDSDSE DEQPSMD LVKSLA KEELLK+KHKEIE
Sbjct: 113 SSTTDSHSTKSKSRRQRRRTIRTAFSDSDSECDEQPSMDDLVKSLARKEELLKSKHKEIE 172

Query: 124 IMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKV 183
            MQ+KVL SYAEMENVMDRT+REAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSK+
Sbjct: 173 KMQEKVLCSYAEMENVMDRTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKI 232

Query: 184 NESEDSIGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKVDPTNEPFDPHKHNAVFQIPDG 243
           +ESED  GAV LLKTLLEGVDMTEKQLMEVFKKSGVEK DPT+EPFDPHKH AVFQIPDG
Sbjct: 233 DESEDPSGAVALLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTSEPFDPHKHYAVFQIPDG 292

Query: 244 SKPEGTVAIVLKSGYMLYDRVLRPAEVGVTQALENSSID 282
           SKP+GTVA+VLKSGYML+DRVLRPAEVGVTQA+E++S D
Sbjct: 293 SKPDGTVAVVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 324

[Close]

BLAST of Lag0038070 vs. NCBI nr
Match: XP_038898199.1 (grpE protein homolog 2, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 393.7 bits (1010), Expect = 1.4e-105
Identity = 225/280 (80.36%), Postives = 249/280 (88.93%), Query Frame = 0


Query: 4   VKVSQFHHIV-NPFLSQKFGVSSSSASHDSSENEEGSAKQS---NSDPARDENLKVSEQV 63
           V+VS  +HIV NPF  Q+FGV SS+A H+SSEN EGSAK S   N+ P +  N +VS++ 
Sbjct: 86  VQVSLLNHIVYNPFPFQRFGV-SSTAIHESSEN-EGSAKHSGSTNNGPTKHGNSEVSDRA 145

Query: 64  EESNSRLNSHSTESKSRRRSRRTIRTAFSDSDSESDEQPSMDGLVKSLAEKEELLKAKHK 123
           EES   L+SHST+SKSRRRSRR++RTAFSDSDSESDEQPSMD LVKSLA KEELLK+KHK
Sbjct: 146 EESTFTLDSHSTKSKSRRRSRRSVRTAFSDSDSESDEQPSMDDLVKSLARKEELLKSKHK 205

Query: 124 EIEIMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSF 183
           E+E MQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSF
Sbjct: 206 ELEKMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSF 265

Query: 184 SKVNESEDSIGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKVDPTNEPFDPHKHNAVFQI 243
           SK+NES+DS GAVPLLK+LLEGVDMTEKQLME F K GVEK DPT+EPFDPHKH AVFQI
Sbjct: 266 SKINESQDSSGAVPLLKSLLEGVDMTEKQLMEAFTKFGVEKFDPTSEPFDPHKHFAVFQI 325

Query: 244 PDGSKPEGTVAIVLKSGYMLYDRVLRPAEVGVTQALENSS 280
           PDGSKP+GTVAIVLKSGYML+DRVLRPAEVGVTQA E++S
Sbjct: 326 PDGSKPDGTVAIVLKSGYMLHDRVLRPAEVGVTQAAEDNS 363

[Close]

BLAST of Lag0038070 vs. NCBI nr
Match: KAG7024936.1 (grpE, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 391.3 bits (1004), Expect = 6.9e-105
Identity = 223/279 (79.93%), Postives = 246/279 (88.17%), Query Frame = 0


Query: 4   VKVSQFHHIV-NPFLSQKFGVSSSSASHDSSENEEGSAKQSNSDPARDENLKVSEQVEES 63
           V VS  +HIV NPF  Q+ GV SS+ASH+SSENEEGSAKQ N       N +VS Q EE 
Sbjct: 55  VHVSLLNHIVSNPFPFQRLGV-SSTASHESSENEEGSAKQDN------VNSEVSNQAEEL 114

Query: 64  NSRLNSHSTESKSRRRSRRTIRTAFSDSDSESDEQPSMDGLVKSLAEKEELLKAKHKEIE 123
           +S  +SHST+SKSRR+ RRTIRTAFS+SDSESDEQPSMD LVKSLA KEELLK+KHKEI+
Sbjct: 115 SSTTDSHSTKSKSRRQRRRTIRTAFSESDSESDEQPSMDDLVKSLARKEELLKSKHKEID 174

Query: 124 IMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKV 183
            MQ+KVL SYAEMENVMDRT+REAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSK+
Sbjct: 175 KMQEKVLCSYAEMENVMDRTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKI 234

Query: 184 NESEDSIGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKVDPTNEPFDPHKHNAVFQIPDG 243
           +ESED  GAV LLKTLLEGVDMTEKQLMEVFKKSGVEK DPT+EPFDPHKH AVFQIPDG
Sbjct: 235 DESEDPSGAVALLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTSEPFDPHKHYAVFQIPDG 294

Query: 244 SKPEGTVAIVLKSGYMLYDRVLRPAEVGVTQALENSSID 282
           SKP+GTVA+VLKSGYML+DRVLRPAEVGVTQA+E++S D
Sbjct: 295 SKPDGTVAVVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 326

[Close]

BLAST of Lag0038070 vs. NCBI nr
Match: KAG6592058.1 (Transcriptional adapter ADA2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 391.0 bits (1003), Expect = 8.9e-105
Identity = 223/279 (79.93%), Postives = 246/279 (88.17%), Query Frame = 0


Query: 4   VKVSQFHHIV-NPFLSQKFGVSSSSASHDSSENEEGSAKQSNSDPARDENLKVSEQVEES 63
           V VS  +HIV NPF  Q+ GV SS+ASH+SSENEEGSAKQ N       N +VS Q EE 
Sbjct: 639 VHVSLLNHIVSNPFPFQRLGV-SSTASHESSENEEGSAKQDN------VNSEVSNQAEEL 698

Query: 64  NSRLNSHSTESKSRRRSRRTIRTAFSDSDSESDEQPSMDGLVKSLAEKEELLKAKHKEIE 123
           +S  +SHST+SKSRR+ RRTIRTAFSDSDSES+EQPSMD LVKSLA KEELLK+KHKEI+
Sbjct: 699 SSTTDSHSTKSKSRRQRRRTIRTAFSDSDSESNEQPSMDDLVKSLARKEELLKSKHKEID 758

Query: 124 IMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKV 183
            MQ+KVL SYAEMENVMDRT+REAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSK+
Sbjct: 759 KMQEKVLCSYAEMENVMDRTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKI 818

Query: 184 NESEDSIGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKVDPTNEPFDPHKHNAVFQIPDG 243
           +ESED  GAV LLKTLLEGVDMTEKQLMEVFKKSGVEK DPT+EPFDPHKH AVFQIPDG
Sbjct: 819 DESEDPSGAVALLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTSEPFDPHKHYAVFQIPDG 878

Query: 244 SKPEGTVAIVLKSGYMLYDRVLRPAEVGVTQALENSSID 282
           SKP+GTVA+VLKSGYML+DRVLRPAEVGVTQA+E++S D
Sbjct: 879 SKPDGTVAVVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 910

[Close]

BLAST of Lag0038070 vs. ExPASy Swiss-Prot
Match: Q8LB47 (GrpE protein homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge2 PE=1 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 8.5e-74
Identity = 164/268 (61.19%), Postives = 203/268 (75.75%), Query Frame = 0


Query: 12  IVNPFLSQKFGVSSS-SASHDSSENEEGSAKQSNSDPARDENLKVSEQVEESNSRLNSHS 71
           +++ F  Q+F  SSS S   D  +    ++K S   P  + N     Q    +   +S +
Sbjct: 56  MMDSFALQRFNFSSSTSPESDEKKTHTEASKTSEEKPTAEAN-----QPGLDSESKDSVT 115

Query: 72  TESKSRRRSRRTIRTAFSDSDSES-DEQPSMDGLVKSLAEKEELLKAKHKEIEIMQDKVL 131
             +K +R+  +   ++ S+SDSES D++ S D LVK +AEKEELL  K +EI+ ++DKVL
Sbjct: 116 DSAKRKRKGAKGAASSSSESDSESDDDELSADDLVKLVAEKEELLSEKEEEIKQLKDKVL 175

Query: 132 RSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKVNESEDSI 191
           R+YAEMENVMDRTRR+AEN+KK+A+QNFAKSLLDVADNLGRASSVVK+SFSK++ SEDS 
Sbjct: 176 RTYAEMENVMDRTRRDAENTKKYAVQNFAKSLLDVADNLGRASSVVKESFSKLDTSEDSA 235

Query: 192 GAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKVDPTNEPFDPHKHNAVFQIPDGSKPEGTV 251
           GA PLLKTLLEGV+MTEKQL EVFKK G+EK DP NEPFDP++HNAVFQ+PD SKPEGTV
Sbjct: 236 GAAPLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINEPFDPNRHNAVFQVPDASKPEGTV 295

Query: 252 AIVLKSGYMLYDRVLRPAEVGVTQALEN 278
           A VLKSGY LYDRV+RPAEVGVTQ  EN
Sbjct: 296 AHVLKSGYTLYDRVIRPAEVGVTQGGEN 318

[Close]

BLAST of Lag0038070 vs. ExPASy Swiss-Prot
Match: Q9FLP3 (GrpE protein homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge1 PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 8.0e-64
Identity = 128/189 (67.72%), Postives = 159/189 (84.13%), Query Frame = 0


Query: 90  SDSESD-EQPSMDGLVKSLAEKEELLKAKHKEIEIMQDKVLRSYAEMENVMDRTRREAEN 149
           +D+E D +  S D LVK ++EKE+LLK + K+I  M+DK LR+YAE +N+MDRT R AE+
Sbjct: 105 TDAEIDFDDLSRDDLVKLVSEKEDLLKVQQKDIMEMKDKFLRTYAEQQNLMDRTNRNAES 164

Query: 150 SKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKVNESEDSIGAVPLLKTLLEGVDMTEKQ 209
           +KKFA+QNFA SLLDVADNL RASSVVK+SFSK++ S+D  GA PLLK LLEGV+MTEKQ
Sbjct: 165 AKKFAVQNFATSLLDVADNLERASSVVKESFSKIDTSKDLAGATPLLKNLLEGVEMTEKQ 224

Query: 210 LMEVFKKSGVEKVDPTNEPFDPHKHNAVFQIPDGSKPEGTVAIVLKSGYMLYDRVLRPAE 269
           L EVF+K+G+ K DP NEPF+P++HNAVFQ+PD SKP+GT+A VLKSGY LYDRV+RPAE
Sbjct: 225 LAEVFRKAGLVKEDPLNEPFNPNRHNAVFQVPDASKPKGTIAHVLKSGYSLYDRVIRPAE 284

Query: 270 VGVTQALEN 278
           VGVT A+EN
Sbjct: 285 VGVTCAVEN 293

[Close]

BLAST of Lag0038070 vs. ExPASy Swiss-Prot
Match: B6JCI1 (Protein GrpE OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) OX=504832 GN=grpE PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.9e-29
Identity = 70/156 (44.87%), Postives = 103/156 (66.03%), Query Frame = 0


Query: 119 KEIEIMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDS 178
           KE    +D++LR+ AEMEN+  RT+RE  +++ + I  FA+ +L++ADNL RA   V   
Sbjct: 47  KEAAEAKDRMLRTLAEMENLRKRTQREVADARAYGIAGFARDVLEIADNLQRALDAV--- 106

Query: 179 FSKVNESEDSIGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKVDPTNEPFDPHKHNAVFQ 238
                 +E    A P L  L+EGV++TE+ L    +K+GV+K+D   E FDP+ H A+F+
Sbjct: 107 -----PAEARAAADPGLTALIEGVELTERSLHRALEKNGVKKLDAAGEKFDPNIHQAMFE 166

Query: 239 IPDGSKPEGTVAIVLKSGYMLYDRVLRPAEVGVTQA 275
           +PD S P GTV  V+++GYM+ DRVLRPA VGV++A
Sbjct: 167 VPDNSVPPGTVVQVIQTGYMIGDRVLRPALVGVSKA 194

[Close]

BLAST of Lag0038070 vs. ExPASy Swiss-Prot
Match: Q3SW78 (Protein GrpE OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=grpE PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28
Identity = 75/195 (38.46%), Postives = 117/195 (60.00%), Query Frame = 0


Query: 88  SDSDSESDEQPSMDGLVKSLAEK---------EELLKAKHKEIEIMQDKVLRSYAEMENV 147
           +DSD ++D+       V+ +  K         ++ L A +K++   +D+ LR+ AEMEN+
Sbjct: 2   TDSDGKTDKSGEPAAEVEPVVSKPYVMPDDPEDDALDALNKQLAEAKDRTLRTLAEMENL 61

Query: 148 MDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKVNESEDSIGAVPLLKTL 207
             RT RE  +++ + I  FA+ +L++ADNL RA   V         ++      P LK L
Sbjct: 62  RKRTAREVSDARTYGISGFARDVLEIADNLQRALDAV--------PADARAAPDPGLKAL 121

Query: 208 LEGVDMTEKQLMEVFKKSGVEKVDPTNEPFDPHKHNAVFQIPDGSKPEGTVAIVLKSGYM 267
           +EGV++TE+ L    +K GV+K DP  E FDP+ H A++++PD S P GTVA V+++GYM
Sbjct: 122 IEGVELTERSLHNALEKHGVKKFDPAGEKFDPNVHQAMYEVPDPSIPVGTVAQVIQAGYM 181

Query: 268 LYDRVLRPAEVGVTQ 274
           + +RVLRPA VGV +
Sbjct: 182 IGERVLRPALVGVAK 188

[Close]

BLAST of Lag0038070 vs. ExPASy Swiss-Prot
Match: A4YJR1 (Protein GrpE OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN=grpE PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.4e-28
Identity = 69/159 (43.40%), Postives = 105/159 (66.04%), Query Frame = 0


Query: 115 KAKHKEIEIMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSV 174
           +A  KE    +DK+LR+ AEMEN+  RT RE  +++ + I  FA+ +LD+ADNL RA   
Sbjct: 38  EAYAKEAAEARDKMLRTLAEMENLRKRTAREVADARMYGITGFARDVLDIADNLQRALDA 97

Query: 175 VKDSFSKVNESEDSIGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKVDPTNEPFDPHKHN 234
           V         +E    A   LK+L+EGV++TE+ L+   +K+GV+K DPT + FDP+   
Sbjct: 98  V--------PAETRANADAGLKSLIEGVELTERSLLNTLEKNGVKKFDPTGQKFDPNFQQ 157

Query: 235 AVFQIPDGSKPEGTVAIVLKSGYMLYDRVLRPAEVGVTQ 274
           A++++PD S P GTV  V+++G+M+ +RVLRPA VGV++
Sbjct: 158 AMYEVPDPSVPSGTVVQVVQAGFMIGERVLRPALVGVSK 188

[Close]

BLAST of Lag0038070 vs. ExPASy TrEMBL
Match: A0A6J1CCY7 (GrpE protein homolog OS=Momordica charantia OX=3673 GN=LOC111010351 PE=3 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.8e-109
Identity = 229/286 (80.07%), Postives = 252/286 (88.11%), Query Frame = 0


Query: 4   VKVSQFHHIV-NPFLSQKFGVSSSSASHDSSENEEGSAKQSNS-----DPARDENLKVSE 63
           V+VS  HHIV NPF  QKFG+SS++ SH+SSEN+EGSAKQS +     DP +DEN +VS+
Sbjct: 40  VQVSLLHHIVFNPFPFQKFGISSTT-SHESSENKEGSAKQSKNYSTTKDPTKDENSEVSD 99

Query: 64  QVEESNSRLNSHSTESKSRRRSRRTIRTAFSDSDSESDEQPSMDGLVKSLAEKEELLKAK 123
           Q  E NS  NSHST+SKSR+  RRTIRTAFSDSDSE  EQPSMD LVKSLA KEELLK+K
Sbjct: 100 QAGELNSTSNSHSTKSKSRQWRRRTIRTAFSDSDSEGCEQPSMDDLVKSLARKEELLKSK 159

Query: 124 HKEIEIMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKD 183
           HKEI+ MQDKVLRSYAEMENV DRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKD
Sbjct: 160 HKEIKKMQDKVLRSYAEMENVKDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKD 219

Query: 184 SFSKVNESEDSIGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKVDPTNEPFDPHKHNAVF 243
           SFSK+ ESEDS GAVPLLKTLLEGVDMTEKQL++VFKKSGVEK DPT+EPFDPH+HNAVF
Sbjct: 220 SFSKIKESEDSSGAVPLLKTLLEGVDMTEKQLVQVFKKSGVEKFDPTSEPFDPHRHNAVF 279

Query: 244 QIPDGSKPEGTVAIVLKSGYMLYDRVLRPAEVGVTQALENSSIDNV 284
           QI DGSKP+GTVAIVLKSGYMLYDRVLRPAEVGVT+A E++  DNV
Sbjct: 280 QISDGSKPDGTVAIVLKSGYMLYDRVLRPAEVGVTRAAESNPSDNV 324

[Close]

BLAST of Lag0038070 vs. ExPASy TrEMBL
Match: A0A6J1F7Z2 (GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111442938 PE=3 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.9e-106
Identity = 225/279 (80.65%), Postives = 246/279 (88.17%), Query Frame = 0


Query: 4   VKVSQFHHIV-NPFLSQKFGVSSSSASHDSSENEEGSAKQSNSDPARDENLKVSEQVEES 63
           V VS  +HIV NPF  Q+FGV SS+ASH+SSENEEGSAKQ       D N +VS Q EE 
Sbjct: 53  VHVSLLNHIVSNPFPFQRFGV-SSTASHESSENEEGSAKQD------DVNSEVSNQAEEL 112

Query: 64  NSRLNSHSTESKSRRRSRRTIRTAFSDSDSESDEQPSMDGLVKSLAEKEELLKAKHKEIE 123
           +S  +SHST+SKSRR+ RRTIRTAFSDSDSE DEQPSMD LVKSLA KEELLK+KHKEIE
Sbjct: 113 SSTTDSHSTKSKSRRQRRRTIRTAFSDSDSECDEQPSMDDLVKSLARKEELLKSKHKEIE 172

Query: 124 IMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKV 183
            MQ+KVL SYAEMENVMDRT+REAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSK+
Sbjct: 173 KMQEKVLCSYAEMENVMDRTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKI 232

Query: 184 NESEDSIGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKVDPTNEPFDPHKHNAVFQIPDG 243
           +ESED  GAV LLKTLLEGVDMTEKQLMEVFKKSGVEK DPT+EPFDPHKH AVFQIPDG
Sbjct: 233 DESEDPSGAVALLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTSEPFDPHKHYAVFQIPDG 292

Query: 244 SKPEGTVAIVLKSGYMLYDRVLRPAEVGVTQALENSSID 282
           SKP+GTVA+VLKSGYML+DRVLRPAEVGVTQA+E++S D
Sbjct: 293 SKPDGTVAVVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 324

[Close]

BLAST of Lag0038070 vs. ExPASy TrEMBL
Match: A0A2P5AS62 (GrpE protein homolog OS=Parasponia andersonii OX=3476 GN=PanWU01x14_305620 PE=3 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 1.3e-85
Identity = 198/291 (68.04%), Postives = 228/291 (78.35%), Query Frame = 0


Query: 5   KVSQFHHIVNPFLSQKFGVSSSSASHDSSENEEGSAKQSNSD-PARDENLK--------- 64
           +VS FH    PF  Q+FG  +SSAS + SE E GS  ++N D P  + + K         
Sbjct: 52  QVSLFHLSSTPF--QRFGF-ASSASPEPSEKEHGSNSENNGDSPKMNGDAKESQTEDSVS 111

Query: 65  ----VSEQVEESNSRLNSHSTESKSRRRSRRTIRTAFSDSDSESDEQPSMDGLVKSLAEK 124
               V++Q +ES S  +S S  +K RRR   T RTAFSDSDSE D   +MD LVK +AEK
Sbjct: 112 GQSDVADQTKESGSISDSQSHTAKRRRRG--TKRTAFSDSDSEED--LTMDDLVKLVAEK 171

Query: 125 EELLKAKHKEIEIMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGR 184
           EELLK+KHKEIE MQDKVLRSYAEMENVM+RTRREAENSKKFAIQNFAKSLLDVADNLGR
Sbjct: 172 EELLKSKHKEIEKMQDKVLRSYAEMENVMERTRREAENSKKFAIQNFAKSLLDVADNLGR 231

Query: 185 ASSVVKDSFSKVNESEDSIGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKVDPTNEPFDP 244
           ASSVVK+SFSK++ S+DS GAVPLLKTLLEGV+MTEKQL+EVFKK GVEK DP NEPFDP
Sbjct: 232 ASSVVKESFSKIDASKDSAGAVPLLKTLLEGVEMTEKQLIEVFKKYGVEKYDPINEPFDP 291

Query: 245 HKHNAVFQIPDGSKPEGTVAIVLKSGYMLYDRVLRPAEVGVTQALENSSID 282
           H+H+AVFQIPD SKP GTVA+VLK GY+LYDRV+RPAEVGVTQA+EN + D
Sbjct: 292 HRHSAVFQIPDPSKPSGTVAVVLKPGYVLYDRVIRPAEVGVTQAVENDAAD 335

[Close]

BLAST of Lag0038070 vs. ExPASy TrEMBL
Match: A0A2N9GZE8 (GrpE protein homolog OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35528 PE=3 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 1.3e-85
Identity = 185/284 (65.14%), Postives = 229/284 (80.63%), Query Frame = 0


Query: 5   KVSQFHHIVNPFLSQKFGVSSSSASHDSSENEEGSAKQSNSDPARDENLKVSEQVEESNS 64
           +V+ FH      + Q+FGV SSSAS ++++ E GSA  +N  P    + ++S+Q  +S +
Sbjct: 56  QVAFFHQSATHSIFQRFGV-SSSASPETADKEHGSAVDNNGAPNTSGDAELSDQAGQSKA 115

Query: 65  RLNSHSTESKS------RRRSRRTIRTAFSDSDSESDEQPSMDGLVKSLAEKEELLKAKH 124
                S +S+S      +RR + T RTAFSDSDSES+++ SM+ L+K + EK+ELLK KH
Sbjct: 116 AETKESGQSQSTLSESVKRRRKVTKRTAFSDSDSESEDELSMEYLIKLVGEKDELLKLKH 175

Query: 125 KEIEIMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDS 184
           +EIE  QDKVLR+YAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVK+S
Sbjct: 176 QEIEKAQDKVLRTYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKES 235

Query: 185 FSKVNESEDSIGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKVDPTNEPFDPHKHNAVFQ 244
           F+K++ S DS GAVPLLKTLLEGV+MTEKQL+EVFKK GVEK DP NEPFDP++HNAVFQ
Sbjct: 236 FAKLDTSNDSSGAVPLLKTLLEGVEMTEKQLVEVFKKYGVEKFDPANEPFDPNRHNAVFQ 295

Query: 245 IPDGSKPEGTVAIVLKSGYMLYDRVLRPAEVGVTQALENSSIDN 283
           +PDGSKP GTVA+VLKSGYMLYDRV+RPAEVGV+QA+EN + ++
Sbjct: 296 MPDGSKPPGTVAVVLKSGYMLYDRVIRPAEVGVSQAVENDAAED 338

[Close]

BLAST of Lag0038070 vs. ExPASy TrEMBL
Match: A0A2P5F264 (GrpE nucleotide exchange factor OS=Trema orientale OX=63057 GN=TorRG33x02_122180 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 3.8e-85
Identity = 193/289 (66.78%), Postives = 223/289 (77.16%), Query Frame = 0


Query: 5   KVSQFHHIVNPFLSQKFGVSSSSASHDSSENEEGSAKQSNSDPARDENLKVSEQVEESNS 64
           +VS FH   +PF  Q+FG  +SSAS + SE E G   ++N D  +        Q E+S S
Sbjct: 86  QVSLFHLSSSPF--QRFGY-ASSASPEPSEKEHGRNSENNGDSPKTNGDAKESQTEDSAS 145

Query: 65  RLNSHSTESK------------SRRRSRRTIRTAFSDSDSESDEQPSMDGLVKSLAEKEE 124
             +  + ++K            ++RR R T RTAFSDSDSE D   +MD LVK +AEKEE
Sbjct: 146 GQSDVADQTKESGSVSDFQSHTAKRRRRGTKRTAFSDSDSEED--LTMDDLVKLVAEKEE 205

Query: 125 LLKAKHKEIEIMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRAS 184
           LLK+KHKEIE MQDKVLRSYAEMENVM+RTRREAENSKKFAIQNFAKSLLDVADNLGRAS
Sbjct: 206 LLKSKHKEIEKMQDKVLRSYAEMENVMERTRREAENSKKFAIQNFAKSLLDVADNLGRAS 265

Query: 185 SVVKDSFSKVNESEDSIGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKVDPTNEPFDPHK 244
           SVVK+SFSK++ S+DS GAVPLLKTLLEGV+MTEKQL+EVFKK GVEK DP NEPFDPH+
Sbjct: 266 SVVKESFSKIDTSKDSAGAVPLLKTLLEGVEMTEKQLIEVFKKYGVEKYDPINEPFDPHR 325

Query: 245 HNAVFQIPDGSKPEGTVAIVLKSGYMLYDRVLRPAEVGVTQALENSSID 282
           HNA FQIPD SKP GTVA+VLK GYMLYDRV+RPAEVGVTQA+EN + D
Sbjct: 326 HNAAFQIPDPSKPSGTVAVVLKPGYMLYDRVIRPAEVGVTQAVENDAAD 369

[Close]

BLAST of Lag0038070 vs. TAIR 10
Match: AT4G26780.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 278.5 bits (711), Expect = 6.0e-75
Identity = 164/268 (61.19%), Postives = 203/268 (75.75%), Query Frame = 0


Query: 12  IVNPFLSQKFGVSSS-SASHDSSENEEGSAKQSNSDPARDENLKVSEQVEESNSRLNSHS 71
           +++ F  Q+F  SSS S   D  +    ++K S   P  + N     Q    +   +S +
Sbjct: 56  MMDSFALQRFNFSSSTSPESDEKKTHTEASKTSEEKPTAEAN-----QPGLDSESKDSVT 115

Query: 72  TESKSRRRSRRTIRTAFSDSDSES-DEQPSMDGLVKSLAEKEELLKAKHKEIEIMQDKVL 131
             +K +R+  +   ++ S+SDSES D++ S D LVK +AEKEELL  K +EI+ ++DKVL
Sbjct: 116 DSAKRKRKGAKGAASSSSESDSESDDDELSADDLVKLVAEKEELLSEKEEEIKQLKDKVL 175

Query: 132 RSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKVNESEDSI 191
           R+YAEMENVMDRTRR+AEN+KK+A+QNFAKSLLDVADNLGRASSVVK+SFSK++ SEDS 
Sbjct: 176 RTYAEMENVMDRTRRDAENTKKYAVQNFAKSLLDVADNLGRASSVVKESFSKLDTSEDSA 235

Query: 192 GAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKVDPTNEPFDPHKHNAVFQIPDGSKPEGTV 251
           GA PLLKTLLEGV+MTEKQL EVFKK G+EK DP NEPFDP++HNAVFQ+PD SKPEGTV
Sbjct: 236 GAAPLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINEPFDPNRHNAVFQVPDASKPEGTV 295

Query: 252 AIVLKSGYMLYDRVLRPAEVGVTQALEN 278
           A VLKSGY LYDRV+RPAEVGVTQ  EN
Sbjct: 296 AHVLKSGYTLYDRVIRPAEVGVTQGGEN 318

[Close]

BLAST of Lag0038070 vs. TAIR 10
Match: AT5G55200.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 245.4 bits (625), Expect = 5.7e-65
Identity = 128/189 (67.72%), Postives = 159/189 (84.13%), Query Frame = 0


Query: 90  SDSESD-EQPSMDGLVKSLAEKEELLKAKHKEIEIMQDKVLRSYAEMENVMDRTRREAEN 149
           +D+E D +  S D LVK ++EKE+LLK + K+I  M+DK LR+YAE +N+MDRT R AE+
Sbjct: 105 TDAEIDFDDLSRDDLVKLVSEKEDLLKVQQKDIMEMKDKFLRTYAEQQNLMDRTNRNAES 164

Query: 150 SKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKVNESEDSIGAVPLLKTLLEGVDMTEKQ 209
           +KKFA+QNFA SLLDVADNL RASSVVK+SFSK++ S+D  GA PLLK LLEGV+MTEKQ
Sbjct: 165 AKKFAVQNFATSLLDVADNLERASSVVKESFSKIDTSKDLAGATPLLKNLLEGVEMTEKQ 224

Query: 210 LMEVFKKSGVEKVDPTNEPFDPHKHNAVFQIPDGSKPEGTVAIVLKSGYMLYDRVLRPAE 269
           L EVF+K+G+ K DP NEPF+P++HNAVFQ+PD SKP+GT+A VLKSGY LYDRV+RPAE
Sbjct: 225 LAEVFRKAGLVKEDPLNEPFNPNRHNAVFQVPDASKPKGTIAHVLKSGYSLYDRVIRPAE 284

Query: 270 VGVTQALEN 278
           VGVT A+EN
Sbjct: 285 VGVTCAVEN 293

[Close]

BLAST of Lag0038070 vs. TAIR 10
Match: AT5G17710.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 52.4 bits (124), Expect = 7.0e-07
Identity = 63/265 (23.77%), Postives = 111/265 (41.89%), Query Frame = 0


Query: 15  PFLSQKFGVSSSSASHDSSENEEGSAKQSNSDPARDENLKVSEQVEESNSRLNSHSTESK 74
           PF S +   + +    +  E  +G+    N + + +E     E+     + L S+     
Sbjct: 63  PFASGEAETTETEVESNEPEETDGAVDVENENASAEEGEAEEEEAAVITALLKSYKE--- 122

Query: 75  SRRRSRRTIRTAFSDSDSESDEQPSMDGLVKSLAEKEELLKAK----HKEIEIMQDKVLR 134
                        + +D+   +   ++  +KS+ +++ LL  K      E+ + +D+++R
Sbjct: 123 -------------ALADNNEGKIAEIEASLKSIEDEKFLLADKVASLSNELSVERDRLIR 182

Query: 135 SYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVK---DSFSKVNESED 194
             A+ +N   RT RE  N    A     ++LL V DN  RA S +K   +   KV  S  
Sbjct: 183 ISADFDNFRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQIKVETEGEEKVTNSYQ 242

Query: 195 SIGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKVDPTNEPFDPHKHNAVFQIPDGSKPEG 254
           SI                 KQ +E+    GV  V+   + FDP  H A+ +       EG
Sbjct: 243 SI----------------YKQFVEILGSLGVIHVETVGKQFDPMLHEAIMREDSAEYEEG 295

Query: 255 TVAIVLKSGYMLYDRVLRPAEVGVT 273
            V    + G++L +R+LRP+ V V+
Sbjct: 303 IVLEEYRKGFLLGERLLRPSMVKVS 295

[Close]

BLAST of Lag0038070 vs. TAIR 10
Match: AT5G17710.2 (Co-chaperone GrpE family protein )

HSP 1 Score: 48.5 bits (114), Expect = 1.0e-05
Identity = 68/262 (25.95%), Postives = 108/262 (41.22%), Query Frame = 0


Query: 24  SSSSASHDSSENEEGSAKQSNSDPARDENLKVSEQVEESNSRLNSHSTESKSRRRSRRTI 83
           +S  A    +E E    +   +D A D        VE  N+     S E          +
Sbjct: 65  ASGEAETTETEVESNEPEVQETDGAVD--------VENENA-----SAEEGEAEEEEAAV 124

Query: 84  RTAFSDS------DSESDEQPSMDGLVKSLAEKEELLKAK----HKEIEIMQDKVLRSYA 143
            TA   S      D+   +   ++  +KS+ +++ LL  K      E+ + +D+++R  A
Sbjct: 125 ITALLKSYKEALADNNEGKIAEIEASLKSIEDEKFLLADKVASLSNELSVERDRLIRISA 184

Query: 144 EMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVK---DSFSKVNESEDSIG 203
           + +N   RT RE  N    A     ++LL V DN  RA S +K   +   KV  S  SI 
Sbjct: 185 DFDNFRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQIKVETEGEEKVTNSYQSI- 244

Query: 204 AVPLLKTLLEGVDMTEKQLMEVFKKSGVEKVDPTNEPFDPHKHNAVFQIPDGSKPEGTVA 263
                           KQ +E+    GV  V+   + FDP  H A+ +       EG V 
Sbjct: 245 ---------------YKQFVEILGSLGVIHVETVGKQFDPMLHEAIMREDSAEYEEGIVL 297

Query: 264 IVLKSGYMLYDRVLRPAEVGVT 273
              + G++L +R+LRP+ V V+
Sbjct: 305 EEYRKGFLLGERLLRPSMVKVS 297

The following BLAST results are available for this feature:

BLAST of Lag0038070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139414.1	7.8e-109	80.07	uncharacterized protein LOC111010351 [Momordica charantia]	[more]
XP_022936267.1	8.1e-106	80.65	grpE protein homolog 2, mitochondrial-like [Cucurbita moschata]	[more]
XP_038898199.1	1.4e-105	80.36	grpE protein homolog 2, mitochondrial-like [Benincasa hispida]	[more]
KAG7024936.1	6.9e-105	79.93	grpE, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6592058.1	8.9e-105	79.93	Transcriptional adapter ADA2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lag0038070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB47	8.5e-74	61.19	GrpE protein homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge2 PE...	[more]
Q9FLP3	8.0e-64	67.72	GrpE protein homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge1 PE...	[more]
B6JCI1	2.9e-29	44.87	Protein GrpE OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC...	[more]
Q3SW78	1.4e-28	38.46	Protein GrpE OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 10...	[more]
A4YJR1	2.4e-28	43.40	Protein GrpE OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN=grpE PE=3 SV=1	[more]

BLAST of Lag0038070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CCY7	3.8e-109	80.07	GrpE protein homolog OS=Momordica charantia OX=3673 GN=LOC111010351 PE=3 SV=1	[more]
A0A6J1F7Z2	3.9e-106	80.65	GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111442938 PE=3 SV=1	[more]
A0A2P5AS62	1.3e-85	68.04	GrpE protein homolog OS=Parasponia andersonii OX=3476 GN=PanWU01x14_305620 PE=3 ...	[more]
A0A2N9GZE8	1.3e-85	65.14	GrpE protein homolog OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35528 PE=3 SV=1	[more]
A0A2P5F264	3.8e-85	66.78	GrpE nucleotide exchange factor OS=Trema orientale OX=63057 GN=TorRG33x02_122180...	[more]

BLAST of Lag0038070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26780.1	6.0e-75	61.19	Co-chaperone GrpE family protein	[more]
AT5G55200.1	5.7e-65	67.72	Co-chaperone GrpE family protein	[more]
AT5G17710.1	7.0e-07	23.77	Co-chaperone GrpE family protein	[more]
AT5G17710.2	1.0e-05	25.95	Co-chaperone GrpE family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 107..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..42
None	No IPR available	PANTHER	PTHR21237:SF37	GRPE PROTEIN HOMOLOG	coord: 15..278
IPR000740	GrpE nucleotide exchange factor	PRINTS	PR00773	GRPEPROTEIN	coord: 129..145 score: 42.83 coord: 225..240 score: 46.29 coord: 252..271 score: 51.09
IPR000740	GrpE nucleotide exchange factor	PFAM	PF01025	GrpE	coord: 106..272 e-value: 1.3E-46 score: 158.3
IPR000740	GrpE nucleotide exchange factor	PANTHER	PTHR21237	GRPE PROTEIN	coord: 15..278
IPR000740	GrpE nucleotide exchange factor	PROSITE	PS01071	GRPE	coord: 228..271
IPR000740	GrpE nucleotide exchange factor	HAMAP	MF_01151	GrpE	coord: 34..273 score: 18.505096
IPR000740	GrpE nucleotide exchange factor	CDD	cd00446	GrpE	coord: 124..271 e-value: 1.90808E-55 score: 173.461
IPR013805	GrpE nucleotide exchange factor, coiled-coil	GENE3D	3.90.20.20		coord: 101..215 e-value: 3.2E-28 score: 99.7
IPR013805	GrpE nucleotide exchange factor, coiled-coil	SUPERFAMILY	58014	Coiled-coil domain of nucleotide exchange factor GrpE	coord: 107..217
IPR009012	GrpE nucleotide exchange factor, head	GENE3D	2.30.22.10	Head domain of nucleotide exchange factor GrpE	coord: 217..272 e-value: 3.1E-20 score: 73.9
IPR009012	GrpE nucleotide exchange factor, head	SUPERFAMILY	51064	Head domain of nucleotide exchange factor GrpE	coord: 218..273

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0038070.1	Lag0038070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0030150	protein import into mitochondrial matrix
cellular_component	GO:0001405	PAM complex, Tim23 associated import motor
molecular_function	GO:0000774	adenyl-nucleotide exchange factor activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0051082	unfolded protein binding