
Lag0038063 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATCTCTCAATCTTAGCTCATGCTTCTCTTCTCCTCTCCCTCTCCTTCCTCGTCCGAGCCGAAGAATTGTCCCCCTGGCTGATGAACAATCTCGACGACGATGACGACGAAGACGGGTTCCAAAAGCACAGTTGCTCCGGCAAGCAACTTTTCTGCTGGAAAGATGGAGATGATGGGCCAAAGGGGAAGAAGCTGATGAAGTGCTGCAAACACCGATGCGTCGACACCAAGTCCGACGACGAAAACTGTGGCTTCTGCGGCAAAATCTGCCCGTTTACACGGCAATGCTGCAAAGGTTTCTGTGTTGACACAAACAACAGCCGGTTTAACTGTGGGAAATGTGGGAATAAATGTCGTTTTCATGTTCGTTGTGTTTATGGTATGTGTGGCTATGGTCAGCCGGACCCAGCTCCCCGCCCACCGAAGGGCCGGTGGAAGCCGCCGCATCCGTCCAAGGATCGCCACTGCCCGCCGCCGGTGGATCGGCCCCGGAGGACTAGCAGTACTTTTGTTTAA ATGCATCTCTCAATCTTAGCTCATGCTTCTCTTCTCCTCTCCCTCTCCTTCCTCGTCCGAGCCGAAGAATTGTCCCCCTGGCTGATGAACAATCTCGACGACGATGACGACGAAGACGGGTTCCAAAAGCACAGTTGCTCCGGCAAGCAACTTTTCTGCTGGAAAGATGGAGATGATGGGCCAAAGGGGAAGAAGCTGATGAAGTGCTGCAAACACCGATGCGTCGACACCAAGTCCGACGACGAAAACTGTGGCTTCTGCGGCAAAATCTGCCCGTTTACACGGCAATGCTGCAAAGGTTTCTGTGTTGACACAAACAACAGCCGGTTTAACTGTGGGAAATGTGGGAATAAATGTCGTTTTCATGTTCGTTGTGTTTATGGTATGTGTGGCTATGGTCAGCCGGACCCAGCTCCCCGCCCACCGAAGGGCCGGTGGAAGCCGCCGCATCCGTCCAAGGATCGCCACTGCCCGCCGCCGGTGGATCGGCCCCGGAGGACTAGCAGTACTTTTGTTTAA ATGCATCTCTCAATCTTAGCTCATGCTTCTCTTCTCCTCTCCCTCTCCTTCCTCGTCCGAGCCGAAGAATTGTCCCCCTGGCTGATGAACAATCTCGACGACGATGACGACGAAGACGGGTTCCAAAAGCACAGTTGCTCCGGCAAGCAACTTTTCTGCTGGAAAGATGGAGATGATGGGCCAAAGGGGAAGAAGCTGATGAAGTGCTGCAAACACCGATGCGTCGACACCAAGTCCGACGACGAAAACTGTGGCTTCTGCGGCAAAATCTGCCCGTTTACACGGCAATGCTGCAAAGGTTTCTGTGTTGACACAAACAACAGCCGGTTTAACTGTGGGAAATGTGGGAATAAATGTCGTTTTCATGTTCGTTGTGTTTATGGTATGTGTGGCTATGGTCAGCCGGACCCAGCTCCCCGCCCACCGAAGGGCCGGTGGAAGCCGCCGCATCCGTCCAAGGATCGCCACTGCCCGCCGCCGGTGGATCGGCCCCGGAGGACTAGCAGTACTTTTGTTTAA MHLSILAHASLLLSLSFLVRAEELSPWLMNNLDDDDDEDGFQKHSCSGKQLFCWKDGDDGPKGKKLMKCCKHRCVDTKSDDENCGFCGKICPFTRQCCKGFCVDTNNSRFNCGKCGNKCRFHVRCVYGMCGYGQPDPAPRPPKGRWKPPHPSKDRHCPPPVDRPRRTSSTFV Homology
BLAST of Lag0038063 vs. NCBI nr
Match: XP_038900147.1 (stigma-specific STIG1-like protein 1 [Benincasa hispida]) HSP 1 Score: 228.0 bits (580), Expect = 6.1e-56 Identity = 112/172 (65.12%), Postives = 128/172 (74.42%), Query Frame = 0
BLAST of Lag0038063 vs. NCBI nr
Match: TYK23073.1 (stigma-specific STIG1-like protein 4 [Cucumis melo var. makuwa]) HSP 1 Score: 222.2 bits (565), Expect = 3.3e-54 Identity = 107/168 (63.69%), Postives = 126/168 (75.00%), Query Frame = 0
BLAST of Lag0038063 vs. NCBI nr
Match: XP_022139655.1 (stigma-specific STIG1-like protein 1 [Momordica charantia]) HSP 1 Score: 184.9 bits (468), Expect = 5.9e-43 Identity = 94/168 (55.95%), Postives = 113/168 (67.26%), Query Frame = 0
BLAST of Lag0038063 vs. NCBI nr
Match: KAA0049791.1 (stigma-specific STIG1-like protein 4 [Cucumis melo var. makuwa]) HSP 1 Score: 178.3 bits (451), Expect = 5.5e-41 Identity = 75/96 (78.12%), Postives = 82/96 (85.42%), Query Frame = 0
BLAST of Lag0038063 vs. NCBI nr
Match: KAG6607787.1 (hypothetical protein SDJN03_01129, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037362.1 hypothetical protein SDJN02_00987, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 136.0 bits (341), Expect = 3.2e-28 Identity = 79/167 (47.31%), Postives = 89/167 (53.29%), Query Frame = 0
BLAST of Lag0038063 vs. ExPASy Swiss-Prot
Match: Q9C6P6 (Stigma-specific STIG1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=KRS PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 5.8e-17 Identity = 46/107 (42.99%), Postives = 55/107 (51.40%), Query Frame = 0
BLAST of Lag0038063 vs. ExPASy Swiss-Prot
Match: Q9SZ28 (Stigma-specific STIG1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At4g26880 PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.6e-14 Identity = 33/87 (37.93%), Postives = 45/87 (51.72%), Query Frame = 0
BLAST of Lag0038063 vs. ExPASy Swiss-Prot
Match: Q9LNN7 (Protein GRIM REAPER OS=Arabidopsis thaliana OX=3702 GN=GRI PE=1 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 3.5e-14 Identity = 34/77 (44.16%), Postives = 42/77 (54.55%), Query Frame = 0
BLAST of Lag0038063 vs. ExPASy Swiss-Prot
Match: Q9FLQ0 (Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g55110 PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.3e-13 Identity = 28/66 (42.42%), Postives = 41/66 (62.12%), Query Frame = 0
BLAST of Lag0038063 vs. ExPASy Swiss-Prot
Match: Q40579 (Protein STIG1 OS=Nicotiana tabacum OX=4097 GN=STIG1 PE=1 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.1e-11 Identity = 27/64 (42.19%), Postives = 34/64 (53.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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