Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTCAGACCTCGGGATTACAGTGCCGAAGCAAAGCTGTTTTTGCTTCATCGTGACCCCGCAGAAATTCATCCTCTCTCAGTTCCACCGTCTCAGCAGGTAAAGATGTTGGTTCTTTTTCGGTTCTCTGTTATTGAATTTTACTCAGTTGGCTGATGAAAATGTCAAATTTGCATAGTTTTAAATTAACGTATATGGAAATTCTGTGGAGTTTTCACTGATATTAGAAGCTAAGTAACACGCTGACTGGTGCGTGAGCGTCGTGGGGGCGGTAGATTGGGAGAATAGGATTTAATGGATCATGAAGCTTTCTGGGCACTGGACATAGAAGTGGGCAGAACTCAGATGTCGTATGTACATGTGGACAAATGGAGAAGGAAAAACCCATGTGATTATCAATTGTTGCCGCGACAGGAACAAACTATTAACATATGTTACGAAATTGATTACACTGTTCAACAAGAGAGCTTGGTGAGATAACTCAAGTATTGATGCGTGGGTAAAATTTTGGTGAACACATTACACATCACCTAGCTGGTTTTCAGAGTGGAGGAAACTGAATCTTAGGAGGTTCATCAATAGCTTCTTCTTGGATGAAATTATAGTTAATTTTTTTTTTTGAGAGAAACAAAATTTCATTGATTAATAAAATAGGGAAAACCCCACACCTAATGGCGGATTACATAAAAATTTCCAATTTAAAATCAAAGAAGAAAGACTATAAGACGTGAACAAGTATTTACATTTATACCAATACAAAGCATGAAATAGAATCTTATCAAAAAAACATTCAAAGGTAGCGAAAACATCCCTGAAAATTATGTCGTTACGCTCATTCCAAAAGAGCCAAAAGAAAACTCTATTAAAGGCAAGCCACGATGTCTTTTTCACTCCATGGAATGGATGTCCCATAAAAGTGGAAGCTAGAAGATCATGAATATTAACATGCATTGGTAAATACCAATCAAAAGCTTCAATAATTAAGGCCCAATATCTAGCAACATTGGAGCAGGTGACAAAAAGATGGTCAGAGTTTTCCCTGTTTGAGGAACACATAACACACCATGATGGCGAAAGATGAAAGTGAGGCCTTTTTCGTTGTAGACGATCAACCGTTTTATGGCTTCAAGACTAAGTTCCCACAAAAAGATTTTTATCTTTTTAGGATAAGCGTCCTTCCATATCACTGAATACAGATTGTTCGAAGTGTTGTCAACGACACCCAGAAGATTGACCACAACATCTTCTTCGCTCTATGGAATGGATGAAATTATAGTTAATCTATACATGTTTTATTGTGTGCACTGCTGGGTTTGCAATAGAGGCGATCATCGGTCGATTGATGTTGGTTTTAAACTCAAACTAGCGCCAACCACCGACATATGTTGGTTTTTGTCTGTCATTTTTGGAGAAAGAAAGGGAGAAGAGAAGAAAGAAGAAAGGGAGAAGAAAGAAGAAAGGGAAAAGGGAAAAGAAGGAAGGAAAAGAGAAATGGAGAAGGGAAAGAGGAAAAAAAAAATGAAAAAAAAAGTGTGTATATATATATATATATATATTATTAATATCCTCCCTTGGGAGGAGGAAGACGTTTATGCAAACATATCTTTATTTATTTATTTTTAATTTGATCGGTCTGGTCGGTTTGAGCTCTCATTGGCTTGTCGACCAACCAACTAGTCAGTTTTGCATCCGATCGAAAATGGCCATAAACCGGTTTCAGTTGGTGGACTCGGTTTTTAGAATTTTTTTTGCTCACTCCTAATATGCAACCAAGCAAATGACATCTAGAGTCTAGACCATTCAGAGCAAATGTGGAGGAGGTTCCTTAAGAACAATCTCCACACAAGAAATTTCAGTAACATCCCTTTCAAGACCATGGTGTTCTGATTTTGTACTATTATGTAATACTACTTACCATTTTGATGATGCACAAAAAAATAGTTTGGGTTAAGATATGCGTTTAATGTAGCTAGTCGATCATCTTGGTTATAATGCTGGTGTGTGTGGGTCGTTCGAATCCGAGGTTCATAAATTTTTTGGAGGGGATTTTAAAATTACTCAATGGTCTTGGGAGAAATCTCATGACAGGAATACTACTAGAAACACGAATATTCAATCAATGTTTAACTTCTTATGAGATACTTGATATTCCATTACAAAATGGATCTTTCACTTGGTCCAGTTTTGGTGACAATTAGTATCTCTCCTTAATAGACAGGTTTTTGGTTACTAAAGATTGTCTTCTTGAATTTGGGGAGTCTCACCTTCTTCGGCTTGACAAAAGCACAATAGACCACTATCCTTTGTCCCTTACTTTCAGCGATATTAATTGGGGTCCAGTTCCGTTCCGTTTTGAAAATTCATGGTTACTAATTGACTATTTTTGTGAGGTATTGGATAATTGGTGGAGACGGAATCCGCTTCAGGGATGGTCGGGCCATGGTTTTATGATGAAATTAAAAGGGTTGAAAAATTAGCTTCGAAGCTGGAGTAGAACTCATCATTTGGCATCATCACAACTTCCTGATTTGATTACTCAATTGAATCAATGGGATAATCTGGAGGACAACGACTCTCCATCTCCTCCTCAAAGGGTCTCTAGGCATATTCTTAGAGAACAAATTGAAGACTTAATTGCCCAAGATCATATTCATTGGCATCAACGTTGCAAAATAATTTGGATCAAAGAGGGTGACGAAAATACTAAATTCTTCCATCATATCTTGGCTGCCTGTAAAAGGAAGAATTCGATTAATGAGGTGCTATCCCGTCAGGGGGTCAGTTTAGTTACAACTATTGATATTGAAATGGAATTCATTGATTTCTATCGGAATTTGTTCACCAAAGATAACCATCCCCGATTTCTTCCCATCAATGTTGACTGGTGCCCTATTAGCGAGACTCAGGCATTAGGGTTGGAAGTTGCCTTCTCTGAGGAAGAAGTATTTCAGGCCATGAATTCTCTAGGATCAAGTAAGTCTCTTGGTCTAGATGGTTTTATAGCTGAGTTCTTTAAATTCTCTTGGAATACTATTAAATAGGATCTTATAACCGTGGTTCAAAATTTTTTTAACACAGGTGTTATTATTGCAACTTTAATGAAACTTATATTTGTCTGAAACCAAAGCATTTAGATTCAAAATCTGTGGTTGATTATCGCCCTATTAGCCTCATCCCGTGTGCTTATAAGATTATTGCTAGAGTTTTATCTAATCGTTTGAAGGGTGTTTTTCCATCTATCATAGCTGAAAACCAAATGGCTTCTGTTGCTAACAGACACATCTTGGATGCCTCCTTAATTGCTAATGAGCTAATTGATGATTGGAATATATATTCGAAAAGAGGTGTGGTTCTTAAATTGGATTTAGAAAAGGCCTTTGATAAACTTGATAGGGATTTTCTGGATGTTGTCCTTCATGCACAAGGCTTTGGTTTAATTTGGAGGAAATGA
mRNA sequence
ATGGAGTTCAGACCTCGGGATTACAGTGCCGAAGCAAAGCTGTTTTTGCTTCATCGTGACCCCGCAGAAATTCATCCTCTCTCAGTTCCACCGTCTCAGCAGCTAGTCGATCATCTTGGTTATAATGCTGGTGTGTGTGGGTCGTTCGAATCCGAGCTTCGAAGCTGGAGTAGAACTCATCATTTGGCATCATCACAACTTCCTGATTTGATTACTCAATTGAATCAATGGGATAATCTGGAGGACAACGACTCTCCATCTCCTCCTCAAAGGGTCTCTAGGCATATTCTTAGAGAACAAATTGAAGACTTAATTGCCCAAGATCATATTCATTGGCATCAACGTTGCAAAATAATTTGGATCAAAGAGGGTGACGAAAATACTAAATTCTTCCATCATATCTTGGCTGCCTGTAAAAGGAAGAATTCGATTAATGAGGTGCTATCCCGTCAGGGGGTCAGTTTAGTTACAACTATTGATATTGAAATGGAATTCATTGATTTCTATCGGAATTTGTTCACCAAAGATAACCATCCCCGATTTCTTCCCATCAATGTTGACTGGTGCCCTATTAGCGAGACTCAGGCATTAGGGTTGGAAGTTGCCTTCTCTGAGGAAGAAGTATTTCAGGCCATGAATTCTCTAGGATCAAATTCAAAATCTGTGGTTGATTATCGCCCTATTAGCCTCATCCCGTGTGCTTATAAGATTATTGCTAGAGTTTTATCTAATCGTTTGAAGGGTGTTTTTCCATCTATCATAGCTGAAAACCAAATGGCTTCTGTTGCTAACAGACACATCTTGGATGCCTCCTTAATTGCTAATGAGCTAATTGATGATTGGAATATATATTCGAAAAGAGGTGTGGTTCTTAAATTGGATTTAGAAAAGGCCTTTGATAAACTTGATAGGGATTTTCTGGATGTTGTCCTTCATGCACAAGGCTTTGGTTTAATTTGGAGGAAATGA
Coding sequence (CDS)
ATGGAGTTCAGACCTCGGGATTACAGTGCCGAAGCAAAGCTGTTTTTGCTTCATCGTGACCCCGCAGAAATTCATCCTCTCTCAGTTCCACCGTCTCAGCAGCTAGTCGATCATCTTGGTTATAATGCTGGTGTGTGTGGGTCGTTCGAATCCGAGCTTCGAAGCTGGAGTAGAACTCATCATTTGGCATCATCACAACTTCCTGATTTGATTACTCAATTGAATCAATGGGATAATCTGGAGGACAACGACTCTCCATCTCCTCCTCAAAGGGTCTCTAGGCATATTCTTAGAGAACAAATTGAAGACTTAATTGCCCAAGATCATATTCATTGGCATCAACGTTGCAAAATAATTTGGATCAAAGAGGGTGACGAAAATACTAAATTCTTCCATCATATCTTGGCTGCCTGTAAAAGGAAGAATTCGATTAATGAGGTGCTATCCCGTCAGGGGGTCAGTTTAGTTACAACTATTGATATTGAAATGGAATTCATTGATTTCTATCGGAATTTGTTCACCAAAGATAACCATCCCCGATTTCTTCCCATCAATGTTGACTGGTGCCCTATTAGCGAGACTCAGGCATTAGGGTTGGAAGTTGCCTTCTCTGAGGAAGAAGTATTTCAGGCCATGAATTCTCTAGGATCAAATTCAAAATCTGTGGTTGATTATCGCCCTATTAGCCTCATCCCGTGTGCTTATAAGATTATTGCTAGAGTTTTATCTAATCGTTTGAAGGGTGTTTTTCCATCTATCATAGCTGAAAACCAAATGGCTTCTGTTGCTAACAGACACATCTTGGATGCCTCCTTAATTGCTAATGAGCTAATTGATGATTGGAATATATATTCGAAAAGAGGTGTGGTTCTTAAATTGGATTTAGAAAAGGCCTTTGATAAACTTGATAGGGATTTTCTGGATGTTGTCCTTCATGCACAAGGCTTTGGTTTAATTTGGAGGAAATGA
Protein sequence
MEFRPRDYSAEAKLFLLHRDPAEIHPLSVPPSQQLVDHLGYNAGVCGSFESELRSWSRTHHLASSQLPDLITQLNQWDNLEDNDSPSPPQRVSRHILREQIEDLIAQDHIHWHQRCKIIWIKEGDENTKFFHHILAACKRKNSINEVLSRQGVSLVTTIDIEMEFIDFYRNLFTKDNHPRFLPINVDWCPISETQALGLEVAFSEEEVFQAMNSLGSNSKSVVDYRPISLIPCAYKIIARVLSNRLKGVFPSIIAENQMASVANRHILDASLIANELIDDWNIYSKRGVVLKLDLEKAFDKLDRDFLDVVLHAQGFGLIWRK
Homology
BLAST of Lag0038057 vs. NCBI nr
Match:
RVX14115.1 (Protein SWEETIE [Vitis vinifera])
HSP 1 Score: 186.0 bits (471), Expect = 5.0e-43
Identity = 102/301 (33.89%), Postives = 164/301 (54.49%), Query Frame = 0
Query: 50 ESELRSWSR-THHLASSQLPDLITQLNQWDNLEDNDSPSPPQRVSRHILREQIEDLIAQD 109
+++L+ W++ + S + D+++ L +D+LE S R + + ++E+LI ++
Sbjct: 1159 KAKLKVWNKASFGELSKRKEDILSDLVNFDSLEQEGGLSHELLAQRALKKGELEELILRE 1218
Query: 110 HIHWHQRCKIIWIKEGDENTKFFHHILAACKRKNSINEVLSRQGVSLVTTIDIEMEFIDF 169
IHW Q+ ++ W+KEGD N+KFFH + + + I E+ + G+ + + I+ E + +
Sbjct: 1219 EIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFIKELENENGLMMNNSESIKEEILRY 1278
Query: 170 YRNLFTKDNHPRFLPINVDWCPISETQALGLEVAFSEEEVFQAM---------------- 229
+ L+T + + +DW PIS A LE F+EEE+F+A+
Sbjct: 1279 FEKLYTSPSGESWRVEGLDWSPISGESAFRLESPFTEEEIFKAIFQMDRDKAPGPDGFTI 1338
Query: 230 -----------NSLGSNSKSVVDYRPISLIPCAYKIIARVLSNRLKGVFPSIIAENQMAS 289
L + + + D+RPISLI YKIIA+VL+ R++GV I Q A
Sbjct: 1339 AVFQDCWEVIKEDLVKHLRRISDFRPISLITSLYKIIAKVLAGRIRGVLHETIHSTQGAF 1398
Query: 290 VANRHILDASLIANELIDDWNIYSKRGVVLKLDLEKAFDKLDRDFLDVVLHAQGFGLIWR 323
V R ILDA LIANE++D+ + GVV K+D EKA+D + DFLD VL +GFG+ WR
Sbjct: 1399 VQGRQILDAVLIANEIVDEKRRSREEGVVFKIDFEKAYDHVSWDFLDHVLEMKGFGIRWR 1458
BLAST of Lag0038057 vs. NCBI nr
Match:
RVW62475.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])
HSP 1 Score: 185.3 bits (469), Expect = 8.5e-43
Identity = 100/280 (35.71%), Postives = 161/280 (57.50%), Query Frame = 0
Query: 50 ESELRSWS-RTHHLASSQLPDLITQLNQWDNLEDNDSPSPPQRVSRHILREQIEDLIAQD 109
+S+L+ W+ T + ++T L++ D +E + + + R + R ++ED++ ++
Sbjct: 1213 KSKLKEWNIMTFGDLKERKKLILTDLSRIDLIEQEGNLNSDLVLERTLKRRELEDVLLKE 1272
Query: 110 HIHWHQRCKIIWIKEGDENTKFFHHILAACKRKNSINEVLSRQGVSLVTTIDIEMEFIDF 169
+ W Q+ ++ WIKEGD N+KFFH + + + I ++S +G +L DI E ++F
Sbjct: 1273 EVQWRQKSRVKWIKEGDCNSKFFHRVATGRRSRKFIKSLISERGETLNNIEDISEEIVNF 1332
Query: 170 YRNLFTKDNHPRFLPINVDWCPISETQALGLEVAFSEEEVFQAMNSLGSNSKSVV----- 229
+ NL++K + +DW PIS+ + L+ F+EEE +++ S V
Sbjct: 1333 FGNLYSKPVGESWRVEGIDWVPISDESGVWLDRPFTEEEFIKSVGCDKRRSYEGVSRVPH 1392
Query: 230 --DYRPISLIPCAYKIIARVLSNRLKGVFPSIIAENQMASVANRHILDASLIANELIDDW 289
DYRPISL+ YKIIA+VLS RL+ V I+++Q A V RHILDA LIANE++D+
Sbjct: 1393 QWDYRPISLVTSLYKIIAKVLSGRLRKVLHETISDSQGAFVEGRHILDAVLIANEVVDEK 1452
Query: 290 NIYSKRGVVLKLDLEKAFDKLDRDFLDVVLHAQGFGLIWR 322
+ G+V K+D EKA+D +D FLD VL +GF WR
Sbjct: 1453 RRSGEEGIVFKIDFEKAYDHVDWGFLDHVLQRKGFSQKWR 1492
BLAST of Lag0038057 vs. NCBI nr
Match:
RVX11949.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])
HSP 1 Score: 181.8 bits (460), Expect = 9.4e-42
Identity = 104/299 (34.78%), Postives = 159/299 (53.18%), Query Frame = 0
Query: 50 ESELRSWSR-THHLASSQLPDLITQLNQWDNLEDNDSPSPPQRVSRHILREQIEDLIAQD 109
+++L+ W++ T + + ++ ++ D +E + S R I + ++E+LI ++
Sbjct: 698 KAKLKDWNKNTFGMLKERKKTILDEIANIDAIEQEGALSSDLAAQRAIRKGELEELILRE 757
Query: 110 HIHWHQRCKIIWIKEGDENTKFFHHILAACKRKNSINEVLSRQGVSLVTTIDIEMEFIDF 169
IHW Q+ KI W+KEGD N+K FH + + KN I + + +G+ L ++ I E + +
Sbjct: 758 EIHWKQKAKIKWVKEGDCNSKLFHKVANGRRNKNFIKLLENERGLVLDSSESITEEILLY 817
Query: 170 YRNLFTKDNHPRFLPINVDWCPISETQALGLEVAFSEEEVFQAMNSLG------------ 229
++ L++ + +DW PIS A L+ F+E E+F A+ L
Sbjct: 818 FKKLYSCPPSESWRVEGIDWSPISVESASRLDSPFAEAEIFNAIFQLDRDKAPGPDGFTI 877
Query: 230 --------------SNSKSVVDYRPISLIPCAYKIIARVLSNRLKGVFPSIIAENQMASV 289
S SK + D+RPISLI C YKIIA+VLS RL+GV I Q A V
Sbjct: 878 AVFQDCWDVIKEDLSQSKKISDFRPISLITCLYKIIAKVLSGRLRGVLQETIHSTQGAFV 937
Query: 290 ANRHILDASLIANELIDDWNIYSKRGVVLKLDLEKAFDKLDRDFLDVVLHAQGFGLIWR 322
R ILDA LIANE++D+ + GVV K+D EKA+D + DFLD VL +GF WR
Sbjct: 938 QGRQILDAVLIANEIVDEKKRSGEEGVVFKIDFEKAYDHVKWDFLDHVLEKKGFSSKWR 996
BLAST of Lag0038057 vs. NCBI nr
Match:
RVW14425.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])
HSP 1 Score: 178.3 bits (451), Expect = 1.0e-40
Identity = 104/306 (33.99%), Postives = 158/306 (51.63%), Query Frame = 0
Query: 50 ESELRSWSR-THHLASSQLPDLITQLNQWDNLEDNDSPSPPQRVSRHILREQIEDLIAQD 109
+++L+ W++ + + ++ L +D +E +P R + ++E+LI ++
Sbjct: 332 KAKLKEWNKFSFGELKEKKKSILNDLANFDAIEQEGGLNPDLLSQRASRKGELEELILRE 391
Query: 110 HIHWHQRCKIIWIKEGDENTKFFHHILAACKRKNSINEVLSRQGVSLVTTIDIEMEFIDF 169
IHW Q+ K+ W+KEGD N+KF+H + + + I E+ + +G+ L I E + +
Sbjct: 392 EIHWRQKAKVKWVKEGDCNSKFYHKVANGRRNRKYIKELENERGLVLKNAESITEEILHY 451
Query: 170 YRNLFTKDNHPRFLPINVDWCPISETQALGLEVAFSEEEVFQAMNSLG------------ 229
+ L+T + +DW PISE AL L+ F+EEE+ +A+ L
Sbjct: 452 FEKLYTNPTGESWGVEGLDWSPISEESALRLDSPFTEEEISKAIFQLDRDKAPGQMALLL 511
Query: 230 --------------------SNSKSVVDYRPISLIPCAYKIIARVLSNRLKGVFPSIIAE 289
S SK + D+RPISLI YKIIA+VLS RL+GV I
Sbjct: 512 PSGIINQSTNASFIVLIPKKSLSKRISDFRPISLITSLYKIIAKVLSGRLRGVLHETIHY 571
Query: 290 NQMASVANRHILDASLIANELIDDWNIYSKRGVVLKLDLEKAFDKLDRDFLDVVLHAQGF 323
Q A V R ILDA LIANE++D+ + GVV K+D EKA+D + DFLD VL +GF
Sbjct: 572 TQGAFVQGRQILDAVLIANEIVDERRRSGEEGVVFKIDFEKAYDHVKWDFLDHVLEKKGF 631
BLAST of Lag0038057 vs. NCBI nr
Match:
CAN78865.1 (hypothetical protein VITISV_013346 [Vitis vinifera])
HSP 1 Score: 177.9 bits (450), Expect = 1.4e-40
Identity = 101/300 (33.67%), Postives = 159/300 (53.00%), Query Frame = 0
Query: 50 ESELRSWSR-THHLASSQLPDLITQLNQWDNLEDNDSPSPPQRVSRHILREQIEDLIAQD 109
+++L+ W++ + + ++ L +D +E +P R + ++E+LI ++
Sbjct: 871 KAKLKEWNKFSFGELKEKKKSILNDLANFDAIEQEGGLNPDLLSQRASRKGELEELILRE 930
Query: 110 HIHWHQRCKIIWIKEGDENTKFFHHILAACKRKNSINEVLSRQGVSLVTTIDIEMEFIDF 169
IHW Q+ K+ W+KEGD N+KF+H + + + I E+ + +G+ L I E + +
Sbjct: 931 EIHWRQKAKVKWVKEGDYNSKFYHKVTNGRRNRKYIKELENERGLVLKNAESITEEILHY 990
Query: 170 YRNLFTKDNHPRFLPINVDWCPISETQALGLEVAFSEEEVFQAMNSLG------------ 229
+ L++ + +DW PISE AL L+ F+EEE+ +A+ L
Sbjct: 991 FEKLYSNPTGESWGVEGLDWSPISEESALKLDSPFTEEEISKAIFQLDRDKAPGPDDFTI 1050
Query: 230 --------------SNSKSVVDYRPISLIPCAYKIIARVLSNRLKGVFPSIIAENQMASV 289
S SK + D++PISLI YKIIA+VLS RL+GV + I +Q A V
Sbjct: 1051 SVFQECWDVIKEDLSLSKRISDFKPISLITSLYKIIAKVLSGRLRGVLHATIHYSQGAFV 1110
Query: 290 ANRHILDASLIANELIDDWNIYSKRGVVLKLDLEKAFDKLDRDFLDVVLHAQGFGLIWRK 323
R ILDA LIANE++D+ + GVV K+D EK +D + DFLD VL +GF WRK
Sbjct: 1111 QGRQILDAVLIANEIVDERRRSGEEGVVFKIDFEKVYDHVKWDFLDHVLEKKGFSPRWRK 1170
BLAST of Lag0038057 vs. ExPASy Swiss-Prot
Match:
P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)
HSP 1 Score: 61.6 bits (148), Expect = 1.9e-08
Identity = 34/96 (35.42%), Postives = 51/96 (53.12%), Query Frame = 0
Query: 222 VVDYRPISLIPCAYKIIARVLSNRLKGVFPSIIAENQMASVANRHILDASLIANELIDDW 281
+ ++RP+SL+ YKI+A+ +S RLK V +I +Q +V R I D + +L+
Sbjct: 522 IKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPGRTIFDNVFLIRDLLHFA 581
Query: 282 NIYSKRGVVLKLDLEKAFDKLDRDFLDVVLHAQGFG 318
L LD EKAFD++D +L L A FG
Sbjct: 582 RRTGLSLAFLSLDQEKAFDRVDHQYLIGTLQAYSFG 617
BLAST of Lag0038057 vs. ExPASy TrEMBL
Match:
A0A438JYU3 (Protein SWEETIE OS=Vitis vinifera OX=29760 GN=SWEETIE_2 PE=4 SV=1)
HSP 1 Score: 186.0 bits (471), Expect = 2.4e-43
Identity = 102/301 (33.89%), Postives = 164/301 (54.49%), Query Frame = 0
Query: 50 ESELRSWSR-THHLASSQLPDLITQLNQWDNLEDNDSPSPPQRVSRHILREQIEDLIAQD 109
+++L+ W++ + S + D+++ L +D+LE S R + + ++E+LI ++
Sbjct: 1159 KAKLKVWNKASFGELSKRKEDILSDLVNFDSLEQEGGLSHELLAQRALKKGELEELILRE 1218
Query: 110 HIHWHQRCKIIWIKEGDENTKFFHHILAACKRKNSINEVLSRQGVSLVTTIDIEMEFIDF 169
IHW Q+ ++ W+KEGD N+KFFH + + + I E+ + G+ + + I+ E + +
Sbjct: 1219 EIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFIKELENENGLMMNNSESIKEEILRY 1278
Query: 170 YRNLFTKDNHPRFLPINVDWCPISETQALGLEVAFSEEEVFQAM---------------- 229
+ L+T + + +DW PIS A LE F+EEE+F+A+
Sbjct: 1279 FEKLYTSPSGESWRVEGLDWSPISGESAFRLESPFTEEEIFKAIFQMDRDKAPGPDGFTI 1338
Query: 230 -----------NSLGSNSKSVVDYRPISLIPCAYKIIARVLSNRLKGVFPSIIAENQMAS 289
L + + + D+RPISLI YKIIA+VL+ R++GV I Q A
Sbjct: 1339 AVFQDCWEVIKEDLVKHLRRISDFRPISLITSLYKIIAKVLAGRIRGVLHETIHSTQGAF 1398
Query: 290 VANRHILDASLIANELIDDWNIYSKRGVVLKLDLEKAFDKLDRDFLDVVLHAQGFGLIWR 323
V R ILDA LIANE++D+ + GVV K+D EKA+D + DFLD VL +GFG+ WR
Sbjct: 1399 VQGRQILDAVLIANEIVDEKRRSREEGVVFKIDFEKAYDHVSWDFLDHVLEMKGFGIRWR 1458
BLAST of Lag0038057 vs. ExPASy TrEMBL
Match:
A0A438FRA1 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_140 PE=4 SV=1)
HSP 1 Score: 185.3 bits (469), Expect = 4.1e-43
Identity = 100/280 (35.71%), Postives = 161/280 (57.50%), Query Frame = 0
Query: 50 ESELRSWS-RTHHLASSQLPDLITQLNQWDNLEDNDSPSPPQRVSRHILREQIEDLIAQD 109
+S+L+ W+ T + ++T L++ D +E + + + R + R ++ED++ ++
Sbjct: 1213 KSKLKEWNIMTFGDLKERKKLILTDLSRIDLIEQEGNLNSDLVLERTLKRRELEDVLLKE 1272
Query: 110 HIHWHQRCKIIWIKEGDENTKFFHHILAACKRKNSINEVLSRQGVSLVTTIDIEMEFIDF 169
+ W Q+ ++ WIKEGD N+KFFH + + + I ++S +G +L DI E ++F
Sbjct: 1273 EVQWRQKSRVKWIKEGDCNSKFFHRVATGRRSRKFIKSLISERGETLNNIEDISEEIVNF 1332
Query: 170 YRNLFTKDNHPRFLPINVDWCPISETQALGLEVAFSEEEVFQAMNSLGSNSKSVV----- 229
+ NL++K + +DW PIS+ + L+ F+EEE +++ S V
Sbjct: 1333 FGNLYSKPVGESWRVEGIDWVPISDESGVWLDRPFTEEEFIKSVGCDKRRSYEGVSRVPH 1392
Query: 230 --DYRPISLIPCAYKIIARVLSNRLKGVFPSIIAENQMASVANRHILDASLIANELIDDW 289
DYRPISL+ YKIIA+VLS RL+ V I+++Q A V RHILDA LIANE++D+
Sbjct: 1393 QWDYRPISLVTSLYKIIAKVLSGRLRKVLHETISDSQGAFVEGRHILDAVLIANEVVDEK 1452
Query: 290 NIYSKRGVVLKLDLEKAFDKLDRDFLDVVLHAQGFGLIWR 322
+ G+V K+D EKA+D +D FLD VL +GF WR
Sbjct: 1453 RRSGEEGIVFKIDFEKAYDHVDWGFLDHVLQRKGFSQKWR 1492
BLAST of Lag0038057 vs. ExPASy TrEMBL
Match:
A0A438BTW6 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_191 PE=4 SV=1)
HSP 1 Score: 178.3 bits (451), Expect = 5.0e-41
Identity = 104/306 (33.99%), Postives = 158/306 (51.63%), Query Frame = 0
Query: 50 ESELRSWSR-THHLASSQLPDLITQLNQWDNLEDNDSPSPPQRVSRHILREQIEDLIAQD 109
+++L+ W++ + + ++ L +D +E +P R + ++E+LI ++
Sbjct: 332 KAKLKEWNKFSFGELKEKKKSILNDLANFDAIEQEGGLNPDLLSQRASRKGELEELILRE 391
Query: 110 HIHWHQRCKIIWIKEGDENTKFFHHILAACKRKNSINEVLSRQGVSLVTTIDIEMEFIDF 169
IHW Q+ K+ W+KEGD N+KF+H + + + I E+ + +G+ L I E + +
Sbjct: 392 EIHWRQKAKVKWVKEGDCNSKFYHKVANGRRNRKYIKELENERGLVLKNAESITEEILHY 451
Query: 170 YRNLFTKDNHPRFLPINVDWCPISETQALGLEVAFSEEEVFQAMNSLG------------ 229
+ L+T + +DW PISE AL L+ F+EEE+ +A+ L
Sbjct: 452 FEKLYTNPTGESWGVEGLDWSPISEESALRLDSPFTEEEISKAIFQLDRDKAPGQMALLL 511
Query: 230 --------------------SNSKSVVDYRPISLIPCAYKIIARVLSNRLKGVFPSIIAE 289
S SK + D+RPISLI YKIIA+VLS RL+GV I
Sbjct: 512 PSGIINQSTNASFIVLIPKKSLSKRISDFRPISLITSLYKIIAKVLSGRLRGVLHETIHY 571
Query: 290 NQMASVANRHILDASLIANELIDDWNIYSKRGVVLKLDLEKAFDKLDRDFLDVVLHAQGF 323
Q A V R ILDA LIANE++D+ + GVV K+D EKA+D + DFLD VL +GF
Sbjct: 572 TQGAFVQGRQILDAVLIANEIVDERRRSGEEGVVFKIDFEKAYDHVKWDFLDHVLEKKGF 631
BLAST of Lag0038057 vs. ExPASy TrEMBL
Match:
A5C162 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_015915 PE=4 SV=1)
HSP 1 Score: 176.4 bits (446), Expect = 1.9e-40
Identity = 107/328 (32.62%), Postives = 163/328 (49.70%), Query Frame = 0
Query: 50 ESELRSWSR-THHLASSQLPDLITQLNQWDNLEDNDSPSPPQRVSRHILREQIEDLIAQD 109
+++L+ W++ + S + D+++ L +D+LE SP V R + + ++E+LI ++
Sbjct: 79 KAKLKEWNKASFRELSKRKKDILSDLANFDSLEQEGGLSPELLVQRALRKGELEELILRE 138
Query: 110 HIHWHQRCKIIWIKEGDENTKFFHHILAACKRKNSINEVLSRQGVSLVTTIDIEMEFIDF 169
IHW Q+ ++ W+KEGD N+KFFH + + + I E+ + + L + I+ E + +
Sbjct: 139 EIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFIKELENESDLMLNNSESIKEEILKY 198
Query: 170 YRNLFTKDNHPRFLPINVDWCPISETQALGLEVAFSEEEVFQAM------NSLG------ 229
+ L+ + + +DW PIS A LE F EEE+ +A+ +LG
Sbjct: 199 FEKLYASPSREPWRVEGLDWSPISGESASRLESPFIEEEISKAIFQLDRDKALGPDGFTI 258
Query: 230 ------------------------------------------SNSKSVVDYRPISLIPCA 289
S SK + DYRPISLI
Sbjct: 259 AVFQDCWEVIKEDLVRVFVEFHRSRIINQSTNASFIVLLPKKSMSKRISDYRPISLITSL 318
Query: 290 YKIIARVLSNRLKGVFPSIIAENQMASVANRHILDASLIANELIDDWNIYSKRGVVLKLD 323
YKIIA+VL+ RL+GV I Q A V R ILDA LIANE++D+ + GVV K+D
Sbjct: 319 YKIIAKVLARRLRGVLHKTIHSTQGAFVQGRQILDAVLIANEIVDEKRRSGEEGVVFKID 378
BLAST of Lag0038057 vs. ExPASy TrEMBL
Match:
A0A438KRX9 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_545 PE=4 SV=1)
HSP 1 Score: 175.3 bits (443), Expect = 4.3e-40
Identity = 98/296 (33.11%), Postives = 157/296 (53.04%), Query Frame = 0
Query: 50 ESELRSWSR-THHLASSQLPDLITQLNQWDNLEDNDSPSPPQRVSRHILREQIEDLIAQD 109
+++L+ W++ + + ++ L +D +E +P R + ++E+LI ++
Sbjct: 37 KAKLKEWNKFSFGELKEKKKSILNDLANFDAIEQEGGLNPDLLSQRASRKGELEELILRE 96
Query: 110 HIHWHQRCKIIWIKEGDENTKFFHHILAACKRKNSINEVLSRQGVSLVTTIDIEMEFIDF 169
IHW Q+ K+ W+KEGD N+KF+H + + + I E+ + +G+ L I E + +
Sbjct: 97 EIHWRQKAKVKWVKEGDYNSKFYHKVTNGRRNRKYIKELENERGLVLKNAESITEEILHY 156
Query: 170 YRNLFTKDNHPRFLPINVDWCPISETQALGLEVAFSEEEVFQAMNSLGSNSK-------- 229
+ L++ + +DW PISE AL L+ F+EEE+ +A+ L +
Sbjct: 157 FEKLYSNPTGESWGVEGLDWSPISEESALKLDSPFTEEEISKAIFQLDRDKAPGPDDFTI 216
Query: 230 --------------SVVDYRPISLIPCAYKIIARVLSNRLKGVFPSIIAENQMASVANRH 289
+ D++PISLI YKIIA+VLS RL+GV + I +Q A V R
Sbjct: 217 SVFQECWDVIKEDLRISDFKPISLITSLYKIIAKVLSGRLRGVLHATIHYSQGAFVQGRQ 276
Query: 290 ILDASLIANELIDDWNIYSKRGVVLKLDLEKAFDKLDRDFLDVVLHAQGFGLIWRK 323
ILDA LIANE++D+ + GVV K+D EK +D + DFLD VL +GF WRK
Sbjct: 277 ILDAVLIANEIVDERRRSGEEGVVFKIDFEKVYDHVKWDFLDHVLEKKGFSPRWRK 332
BLAST of Lag0038057 vs. TAIR 10
Match:
AT1G43760.1 (DNAse I-like superfamily protein )
HSP 1 Score: 48.9 bits (115), Expect = 8.8e-06
Identity = 32/131 (24.43%), Postives = 62/131 (47.33%), Query Frame = 0
Query: 95 HILREQIEDLIAQDHIHWHQRCKIIWIKEGDENTKFFHHILAACKRKNSINEVLSRQGVS 154
H+ R++ A + Q+ +I W+++GD NT+FFH ++ A + KN I + V
Sbjct: 418 HVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVR 477
Query: 155 LVTTIDIEMEFIDFYRNL-------FTKDNHPRFLPINVDWCPISETQALGLEVAFSEEE 214
+ ++ + +Y +L T D+ R I+ C ++T A L S++E
Sbjct: 478 VENVTQVKEMIVAYYTHLLGSDSDILTPDSVQRIKDIHPFRC--NDTLASRLSALPSDKE 537
Query: 215 VFQAMNSLGSN 219
+ A+ ++ N
Sbjct: 538 ITAAVFAMPRN 546
BLAST of Lag0038057 vs. TAIR 10
Match:
AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )
HSP 1 Score: 43.1 bits (100), Expect = 4.9e-04
Identity = 26/80 (32.50%), Postives = 44/80 (55.00%), Query Frame = 0
Query: 245 RLKGVFPSIIAENQMASVANRHILDASLIANELIDDWNIYSKRGV----VLKLDLEKAFD 304
RLK + ++I Q + + R D + E + ++ K+GV +LKLDLEKA+D
Sbjct: 4 RLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVH--SMRRKKGVKGWMLLKLDLEKAYD 63
Query: 305 KLDRDFLDVVLHAQGFGLIW 321
++ D+L+ L + GF +W
Sbjct: 64 RIRWDYLEDTLISAGFPEVW 81
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
RVX14115.1 | 5.0e-43 | 33.89 | Protein SWEETIE [Vitis vinifera] | [more] |
RVW62475.1 | 8.5e-43 | 35.71 | Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera] | [more] |
RVX11949.1 | 9.4e-42 | 34.78 | LINE-1 retrotransposable element ORF2 protein [Vitis vinifera] | [more] |
RVW14425.1 | 1.0e-40 | 33.99 | LINE-1 retrotransposable element ORF2 protein [Vitis vinifera] | [more] |
CAN78865.1 | 1.4e-40 | 33.67 | hypothetical protein VITISV_013346 [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
P14381 | 1.9e-08 | 35.42 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |
A0A438JYU3 | 2.4e-43 | 33.89 | Protein SWEETIE OS=Vitis vinifera OX=29760 GN=SWEETIE_2 PE=4 SV=1 | [more] |
A0A438FRA1 | 4.1e-43 | 35.71 | Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX... | [more] |
A0A438BTW6 | 5.0e-41 | 33.99 | LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF... | [more] |
A5C162 | 1.9e-40 | 32.62 | Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI... | [more] |
A0A438KRX9 | 4.3e-40 | 33.11 | Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX... | [more] |
Match Name | E-value | Identity | Description | |
AT1G43760.1 | 8.8e-06 | 24.43 | DNAse I-like superfamily protein | [more] |
AT4G20520.1 | 4.9e-04 | 32.50 | RNA binding;RNA-directed DNA polymerases | [more] |