Lag0038039 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0038039
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionprotein translation factor SUI1 homolog
Locationchr2: 11858863 .. 11860196 (-)
RNA-Seq ExpressionLag0038039
SyntenyLag0038039
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAAATCGGGCCGGGCGCCAGCATGCACCCCCGGTTTGGCCCGTTTTACTAAAAGCCCTCCCCACTTGGCCCACTTGGACCGAACCGTCTAGGTTCCTCTCCCGTGGGCCCCACGTCTCCTCTCGGGTCACGAATCTTCCGGGTCGGATCCGGTTCGCGTTTCGCGTTCAATGAACGCTTCTATTCACCGCCCTTAAACCATATATATTTTGTTTCCTTCCAGATATGTACACGTCATCGAAGATCACGACCGTCCATTACCAATCGTGAACCGTCCACGTCATCACCCAGAAAATTCCAGCTCAATCCTGACTCCCATACGGATACGGATTCGCGGTGGAAACGGACTCTTGCCACCTTCCCCCAAATCTCTATAAATACTTCCGATCCTTTGCTCGATCCTCTCATCGTTCTTCCTTCTTTTTCTCTGTTCTTCTCCTTTTCTCGATCGCTTCGACTCTTTGCGTTCTTGTAAGTCTCCGATTCCTTCTGAATTCTTTCATCGATCTCCTTCAGATTGTGTGGTTGTTAGCCTCTGATTTCCGTTTCTGTCGTTGGTTTCTTGATTTCGCTTTCTGGGTTCGTCTTTTTTGTGCCTTTGATTCGTGGGTCGTGTGTGTTTTGTTTGATGATTCGACGATCGTGTAGAGATCGATCGTTCTTTCTCGGGTTTTTGCTTGTATTGGCTGGATCTTTGTGTTCTTGTTTGCTTTCTTTATCTTGTTCAAGGGTTTGAGATGGATTCTGGTGATTGAGGATATGATTTTGCTAATTGGGATTAATTCTTGTGACGATCCGTTGTATTTCGCTTGTAAATTCTGCTGTTTCTGTTACTTGTTGTTTTCTTGGGATTTTGCGTTTGTGATGGATATTTTTACTTTGGTTGTGATTGTGAAGGGGGTGTGTTGTTTAACCATGTTGTTTTTGATGTTCATATTTCAGATCTCTAGTTGTCCAGTTTCGTTTCGAGCTTTTCGTCCAAACAAGGGTTGATGGTTCAATTAGACCTGGAAATCCCATCTGCTTTCGATCCATTCGCGGACGCCAGGGATTCTGATGCCCCCGGAAGCAAGGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACTACAGTTCAGGGTCTGAAGAAGGAGTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTCTGCTGTAATGGTAACGTGGTCCAAGACAAAGAGTTGGGGAAGATAATTCAACTTCAGGGCGATCAGCGCAAGAACGTCTCCCAGTTCCTGGTTCACGCTGGACTTGTCAAGAAGGATCAGATCAAGATCCATGGGTTCTGA

mRNA sequence

ATGTTAAATCGGGCCGGGCGCCAGCATGCACCCCCGGTTTGGCCCGTTTTACTAAAAGCCCTCCCCACTTGGCCCACTTGGACCGAACCGTCTAGGTTCCTCTCCCGTGGGCCCCACGTCTCCTCTCGGGTCACGAATCTTCCGGGTCGGATCCGATCACGACCGTCCATTACCAATCGTGAACCGTCCACGTCATCACCCAGAAAATTCCAGCTCAATCCTGACTCCCATACGGATACGGATTCGCGGTGGAAACGGACTCTTGCCACCTTCCCCCAAATCTCTATAAATACTTCCGATCCTTTGCTCGATCCTCTCATCGTTCTTCCTTCTTTTTCTCTGTTCTTCTCCTTTTCTCGATCGCTTCGACTCTTTGCGTTCTTTTTCGTTTCGAGCTTTTCGTCCAAACAAGGGTTGATGGTTCAATTAGACCTGGAAATCCCATCTGCTTTCGATCCATTCGCGGACGCCAGGGATTCTGATGCCCCCGGAAGCAAGGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACTACAGTTCAGGGTCTGAAGAAGGAGTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTCTGCTGTAATGGTAACGTGGTCCAAGACAAAGAGTTGGGGAAGATAATTCAACTTCAGGGCGATCAGCGCAAGAACGTCTCCCAGTTCCTGGTTCACGCTGGACTTGTCAAGAAGGATCAGATCAAGATCCATGGGTTCTGA

Coding sequence (CDS)

ATGTTAAATCGGGCCGGGCGCCAGCATGCACCCCCGGTTTGGCCCGTTTTACTAAAAGCCCTCCCCACTTGGCCCACTTGGACCGAACCGTCTAGGTTCCTCTCCCGTGGGCCCCACGTCTCCTCTCGGGTCACGAATCTTCCGGGTCGGATCCGATCACGACCGTCCATTACCAATCGTGAACCGTCCACGTCATCACCCAGAAAATTCCAGCTCAATCCTGACTCCCATACGGATACGGATTCGCGGTGGAAACGGACTCTTGCCACCTTCCCCCAAATCTCTATAAATACTTCCGATCCTTTGCTCGATCCTCTCATCGTTCTTCCTTCTTTTTCTCTGTTCTTCTCCTTTTCTCGATCGCTTCGACTCTTTGCGTTCTTTTTCGTTTCGAGCTTTTCGTCCAAACAAGGGTTGATGGTTCAATTAGACCTGGAAATCCCATCTGCTTTCGATCCATTCGCGGACGCCAGGGATTCTGATGCCCCCGGAAGCAAGGAGTATGTTCATATCCGCGTGCAGCAGAGGAATGGCAAGAAGTGCTTGACTACAGTTCAGGGTCTGAAGAAGGAGTTCAGCTACGAGAAGATCCTCAAAGACGTGAAGAAGGAGTTCTGCTGTAATGGTAACGTGGTCCAAGACAAAGAGTTGGGGAAGATAATTCAACTTCAGGGCGATCAGCGCAAGAACGTCTCCCAGTTCCTGGTTCACGCTGGACTTGTCAAGAAGGATCAGATCAAGATCCATGGGTTCTGA

Protein sequence

MLNRAGRQHAPPVWPVLLKALPTWPTWTEPSRFLSRGPHVSSRVTNLPGRIRSRPSITNREPSTSSPRKFQLNPDSHTDTDSRWKRTLATFPQISINTSDPLLDPLIVLPSFSLFFSFSRSLRLFAFFFVSSFSSKQGLMVQLDLEIPSAFDPFADARDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF
Homology
[Close]
BLAST of Lag0038039 vs. NCBI nr
Match: XP_022139784.1 (protein translation factor SUI1 homolog 1-like [Momordica charantia])

HSP 1 Score: 220.7 bits (561), Expect = 1.4e-53
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 140 MVQLDLEIPSAFDPFADARDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 199
           MV+LDLEIPSAFDPFA+ARDSDAPG+KEYVHIRVQQRNGKKCLTTVQGLKK+FSYEKILK
Sbjct: 1   MVELDLEIPSAFDPFAEARDSDAPGNKEYVHIRVQQRNGKKCLTTVQGLKKQFSYEKILK 60

Query: 200 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 252
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV AGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]
BLAST of Lag0038039 vs. NCBI nr
Match: XP_004139787.1 (protein translation factor SUI1 homolog 1 [Cucumis sativus] >XP_008447738.1 PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis melo] >XP_038899382.1 protein translation factor SUI1 homolog 1-like [Benincasa hispida] >KGN44162.1 hypothetical protein Csa_015864 [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 3.2e-53
Identity = 106/112 (94.64%), Postives = 110/112 (98.21%), Query Frame = 0 

Query: 140 MVQLDLEIPSAFDPFADARDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 199
           MV+LD +IPSAFDPFADA+DSDAPG+KEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 200 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 252
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV AGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]
BLAST of Lag0038039 vs. NCBI nr
Match: KAG6607799.1 (AUGMIN subunit 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 218.4 bits (555), Expect = 7.0e-53
Identity = 104/113 (92.04%), Postives = 111/113 (98.23%), Query Frame = 0 

Query: 139 LMVQLDLEIPSAFDPFADARDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 198
           LMV++D++IPSA+DPFADARDSDAPG KEYVHIRVQQRNGKKCLTTVQGLKK+FSYEKIL
Sbjct: 448 LMVEIDVQIPSAYDPFADARDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKIL 507

Query: 199 KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 252
           KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV AG+VKKDQIKIHGF
Sbjct: 508 KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 560

[Close]
BLAST of Lag0038039 vs. NCBI nr
Match: KAA0025154.1 (SUI1 domain-containing protein [Cucumis melo var. makuwa] >TYK23112.1 SUI1 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 218.0 bits (554), Expect = 9.2e-53
Identity = 112/128 (87.50%), Postives = 116/128 (90.62%), Query Frame = 0 

Query: 124 LFAFFFVSSFSSKQGLMVQLDLEIPSAFDPFADARDSDAPGSKEYVHIRVQQRNGKKCLT 183
           LF F  VS  S     MV+LD +IPSAFDPFADA+DSDAPG+KEYVHIRVQQRNGKKCLT
Sbjct: 26  LFGFVQVSIQSR---FMVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLT 85

Query: 184 TVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKK 243
           TVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV AGLVKK
Sbjct: 86  TVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKK 145

Query: 244 DQIKIHGF 252
           DQIKIHGF
Sbjct: 146 DQIKIHGF 150

[Close]
BLAST of Lag0038039 vs. NCBI nr
Match: KAG7015195.1 (Protein translation factor SUI1-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 217.2 bits (552), Expect = 1.6e-52
Identity = 103/113 (91.15%), Postives = 111/113 (98.23%), Query Frame = 0 

Query: 139 LMVQLDLEIPSAFDPFADARDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 198
           LMV++D++IPSA+DPFADA+DSDAPG KEYVHIRVQQRNGKKCLTTVQGLKK+FSYEKIL
Sbjct: 95  LMVEIDVQIPSAYDPFADAKDSDAPGGKEYVHIRVQQRNGKKCLTTVQGLKKDFSYEKIL 154

Query: 199 KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 252
           KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV AG+VKKDQIKIHGF
Sbjct: 155 KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGIVKKDQIKIHGF 207

[Close]
BLAST of Lag0038039 vs. ExPASy Swiss-Prot
Match: P41568 (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4g27130 PE=1 SV=2)

HSP 1 Score: 180.6 bits (457), Expect = 2.1e-44
Identity = 88/113 (77.88%), Postives = 99/113 (87.61%), Query Frame = 0 

Query: 140 MVQLDLEIPSAFDPFADARDSDA-PGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 199
           M +LD ++P+AFDPFADA   D+  G+KEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 200 KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 252
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLV AGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]
BLAST of Lag0038039 vs. ExPASy Swiss-Prot
Match: Q94JV4 (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g54290 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.6e-44
Identity = 87/113 (76.99%), Postives = 99/113 (87.61%), Query Frame = 0 

Query: 140 MVQLDLEIPSAFDPFADARDSDA-PGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 199
           M  L++++P+AFDPFADA   D+  G+KEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 200 KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 252
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLV AGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]
BLAST of Lag0038039 vs. ExPASy Swiss-Prot
Match: Q9SQF4 (Protein translation factor SUI1 homolog OS=Brassica oleracea OX=3712 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 6.2e-44
Identity = 87/113 (76.99%), Postives = 99/113 (87.61%), Query Frame = 0 

Query: 140 MVQLDLEIPSAFDPFADARDSDA-PGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 199
           M +LD ++P+AFDPFADA   D+  G+KEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 200 KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 252
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLV AGLVKKD I+IHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113

[Close]
BLAST of Lag0038039 vs. ExPASy Swiss-Prot
Match: P56330 (Protein translation factor SUI1 homolog OS=Zea mays OX=4577 GN=TIF PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 6.2e-44
Identity = 86/115 (74.78%), Postives = 99/115 (86.09%), Query Frame = 0 

Query: 140 MVQLDLEIPSAFDPFADARDSD---APGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEK 199
           M  LD++IP+AFDPFA+A   D   A GSK+YVH+R+QQRNG+K LTTVQGLKKEFSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 60

Query: 200 ILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 252
           ILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLV AG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]
BLAST of Lag0038039 vs. ExPASy Swiss-Prot
Match: A6MZM2 (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=GOS2 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 6.2e-44
Identity = 86/115 (74.78%), Postives = 99/115 (86.09%), Query Frame = 0 

Query: 140 MVQLDLEIPSAFDPFADARDSD---APGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEK 199
           M  LD++IP+AFDPFA+A   D   A GSK+YVH+R+QQRNG+K LTTVQGLKKEFSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 200 ILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 252
           ILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLV AG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]
BLAST of Lag0038039 vs. ExPASy TrEMBL
Match: A0A6J1CDZ2 (protein translation factor SUI1 homolog 1-like OS=Momordica charantia OX=3673 GN=LOC111010607 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 6.9e-54
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 140 MVQLDLEIPSAFDPFADARDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 199
           MV+LDLEIPSAFDPFA+ARDSDAPG+KEYVHIRVQQRNGKKCLTTVQGLKK+FSYEKILK
Sbjct: 1   MVELDLEIPSAFDPFAEARDSDAPGNKEYVHIRVQQRNGKKCLTTVQGLKKQFSYEKILK 60

Query: 200 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 252
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV AGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]
BLAST of Lag0038039 vs. ExPASy TrEMBL
Match: A0A0A0K771 (SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G209580 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.5e-53
Identity = 106/112 (94.64%), Postives = 110/112 (98.21%), Query Frame = 0 

Query: 140 MVQLDLEIPSAFDPFADARDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 199
           MV+LD +IPSAFDPFADA+DSDAPG+KEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 200 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 252
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV AGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]
BLAST of Lag0038039 vs. ExPASy TrEMBL
Match: A0A1S3BI45 (protein translation factor SUI1 homolog 1-like OS=Cucumis melo OX=3656 GN=LOC103490142 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.5e-53
Identity = 106/112 (94.64%), Postives = 110/112 (98.21%), Query Frame = 0 

Query: 140 MVQLDLEIPSAFDPFADARDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 199
           MV+LD +IPSAFDPFADA+DSDAPG+KEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 200 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 252
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV AGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]
BLAST of Lag0038039 vs. ExPASy TrEMBL
Match: A0A5D3DHR8 (SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001030 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 4.5e-53
Identity = 112/128 (87.50%), Postives = 116/128 (90.62%), Query Frame = 0 

Query: 124 LFAFFFVSSFSSKQGLMVQLDLEIPSAFDPFADARDSDAPGSKEYVHIRVQQRNGKKCLT 183
           LF F  VS  S     MV+LD +IPSAFDPFADA+DSDAPG+KEYVHIRVQQRNGKKCLT
Sbjct: 26  LFGFVQVSIQSR---FMVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLT 85

Query: 184 TVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKK 243
           TVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV AGLVKK
Sbjct: 86  TVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKK 145

Query: 244 DQIKIHGF 252
           DQIKIHGF
Sbjct: 146 DQIKIHGF 150

[Close]
BLAST of Lag0038039 vs. ExPASy TrEMBL
Match: A0A6J1IJY4 (protein translation factor SUI1 homolog 1 OS=Cucurbita maxima OX=3661 GN=LOC111476953 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 7.6e-53
Identity = 105/112 (93.75%), Postives = 109/112 (97.32%), Query Frame = 0 

Query: 140 MVQLDLEIPSAFDPFADARDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 199
           MV+LD +IPSAFDPFADA+DSDAPG+K YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 200 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 252
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV AGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]
BLAST of Lag0038039 vs. TAIR 10
Match: AT5G54940.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 198.7 bits (504), Expect = 5.4e-51
Identity = 92/112 (82.14%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 140 MVQLDLEIPSAFDPFADARDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 199
           MV+LD++IPSA+DPFA+A+DSDAPG+KE +HIR+QQRNGKK LTTVQGLKKE+SYE+ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 200 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 252
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRK VSQFLV  G+ KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]
BLAST of Lag0038039 vs. TAIR 10
Match: AT5G54940.2 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 198.7 bits (504), Expect = 5.4e-51
Identity = 92/112 (82.14%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 140 MVQLDLEIPSAFDPFADARDSDAPGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 199
           MV+LD++IPSA+DPFA+A+DSDAPG+KE +HIR+QQRNGKK LTTVQGLKKE+SYE+ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 200 DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 252
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRK VSQFLV  G+ KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]
BLAST of Lag0038039 vs. TAIR 10
Match: AT4G27130.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-45
Identity = 88/113 (77.88%), Postives = 99/113 (87.61%), Query Frame = 0 

Query: 140 MVQLDLEIPSAFDPFADARDSDA-PGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 199
           M +LD ++P+AFDPFADA   D+  G+KEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 200 KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 252
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLV AGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]
BLAST of Lag0038039 vs. TAIR 10
Match: AT5G54760.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 180.3 bits (456), Expect = 2.0e-45
Identity = 88/113 (77.88%), Postives = 99/113 (87.61%), Query Frame = 0 

Query: 140 MVQLDLEIPSAFDPFADARDSDA-PGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 199
           M +LD ++P+AFDPFADA   D+  G+KEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 200 KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 252
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLV AGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]
BLAST of Lag0038039 vs. TAIR 10
Match: AT5G54760.2 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 180.3 bits (456), Expect = 2.0e-45
Identity = 88/113 (77.88%), Postives = 99/113 (87.61%), Query Frame = 0 

Query: 140 MVQLDLEIPSAFDPFADARDSDA-PGSKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 199
           M +LD ++P+AFDPFADA   D+  G+KEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 200 KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 252
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLV AGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

The following BLAST results are available for this feature:
BLAST of Lag0038039 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022139784.11.4e-5395.54protein translation factor SUI1 homolog 1-like [Momordica charantia][more]
XP_004139787.13.2e-5394.64protein translation factor SUI1 homolog 1 [Cucumis sativus] >XP_008447738.1 PRED... [more]
KAG6607799.17.0e-5392.04AUGMIN subunit 4, partial [Cucurbita argyrosperma subsp. sororia][more]
KAA0025154.19.2e-5387.50SUI1 domain-containing protein [Cucumis melo var. makuwa] >TYK23112.1 SUI1 domai... [more]
KAG7015195.11.6e-5291.15Protein translation factor SUI1-like 1, partial [Cucurbita argyrosperma subsp. a... [more]
BLAST of Lag0038039 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P415682.1e-4477.88Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4... [more]
Q94JV43.6e-4476.99Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Q9SQF46.2e-4476.99Protein translation factor SUI1 homolog OS=Brassica oleracea OX=3712 PE=3 SV=1[more]
P563306.2e-4474.78Protein translation factor SUI1 homolog OS=Zea mays OX=4577 GN=TIF PE=3 SV=1[more]
A6MZM26.2e-4474.78Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 G... [more]
BLAST of Lag0038039 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CDZ26.9e-5495.54protein translation factor SUI1 homolog 1-like OS=Momordica charantia OX=3673 GN... [more]
A0A0A0K7711.5e-5394.64SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G209580 PE=3 S... [more]
A0A1S3BI451.5e-5394.64protein translation factor SUI1 homolog 1-like OS=Cucumis melo OX=3656 GN=LOC103... [more]
A0A5D3DHR84.5e-5387.50SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A6J1IJY47.6e-5393.75protein translation factor SUI1 homolog 1 OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
BLAST of Lag0038039 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G54940.15.4e-5182.14Translation initiation factor SUI1 family protein [more]
AT5G54940.25.4e-5182.14Translation initiation factor SUI1 family protein [more]
AT4G27130.11.5e-4577.88Translation initiation factor SUI1 family protein [more]
AT5G54760.12.0e-4577.88Translation initiation factor SUI1 family protein [more]
AT5G54760.22.0e-4577.88Translation initiation factor SUI1 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001950SUI1 domainPFAMPF01253SUI1coord: 166..239
e-value: 2.8E-23
score: 82.2
IPR001950SUI1 domainPROSITEPS50296SUI1coord: 169..239
score: 22.460489
NoneNo IPR availableGENE3D3.30.780.10coord: 131..251
e-value: 1.9E-44
score: 152.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..73
NoneNo IPR availablePANTHERPTHR10388:SF65PROTEIN TRANSLATION FACTOR SUI1 HOMOLOGcoord: 140..251
NoneNo IPR availablePANTHERPTHR10388EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1coord: 140..251
IPR005874Eukaryotic translation initiation factor SUI1TIGRFAMTIGR01160TIGR01160coord: 146..251
e-value: 1.6E-50
score: 168.3
IPR005874Eukaryotic translation initiation factor SUI1CDDcd11566eIF1_SUI1coord: 167..250
e-value: 1.17962E-52
score: 163.475
IPR036877SUI1 domain superfamilySUPERFAMILY55159eIF1-likecoord: 143..251

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0038039.1Lag0038039.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006413 translational initiation
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003743 translation initiation factor activity