Lag0038032 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0038032
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	CRS2-associated factor 2, mitochondrial
Location	chr2: 11765807 .. 11767325 (+)
RNA-Seq Expression	Lag0038032
Synteny	Lag0038032

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGTGGTTACCCTCGCCTCGCCCCACTCAAACGTCGCCGTATAGCGCTTCTTCTCTTCTCTACATCTCTGCAAAACTGCAACTTCATTACACCCTCGTCGAGCTGCCGGAGATGGCGATTCATTTCCGAACACGAATCAGATTTCCAGATCACTGGAACCAGAAACCCAGTGGCTATTTCCTCTTGATCTACCGATTCATCTCCAAATCTCTGTCTGAAAGCACCTACGATCCTCCATTTTCGCCTGCTTCCAAGCTCCAAAAACCGAAGAACAAGAAAACCCACGATGGAAATTCGAATTCAAACAAAAACCCCACTCTCCCTCTCCAATCGTACCTTCCTTTCGACTTCTTCTACTCCTACTCTGAGACCAATCCCTCAGTTAAGCCTATAAGCTTTCGAGAATCGCCCAAATTCTCACCGTTTGGCCCGGGCCGACTCGACCGGAAATGGACCGGAACTTCGGCCCCACGGAGGTGGAGGTGAAGATAAACGAAGTGTTAGAGGAGAGGAGACGGATTCTTGGAGACCCATTAACGGAGGAGGAAGTTGCAGAGCTGGTGGAACAGTATCGGCATAACAATTGCTCCCGGCAAATCAATCTTGGTAATACTAGAATAGTTTTACAACCATTTCCAGTTGTTATTGAAATTGTGAGATTGATTCTTAAATGCTATGAGAACTTGAATTCATGTTTCAATCCATGGTGGCCACAATATCCTACGAGTTTTCTTGGCAACCAAATGTACTAGGGTCAGGCGGTTGTCCGTGAGATTAGTCGAGGTGTGCATAAGTTGGCCCCGGACCCGCACAGATATTAAAAAAAAAAACTTGAATTCATGTTAATGGAGGAAATTGGCTGGTAGTTGTATGATTGAATTCCTTCTATCAATGTACTTGCATTACTTATGCACATTCTATGGTGTTGTTTTTGTTTGTTATGATCGTAGTGACTGTTGATTAGAAATTTGTTGAGATTGAGTAAGAAGGAATAAAGGGTTTGAGTGGTTTTGCATTTGGCTTAACTAGGGAAGGGTGGAGTTACTCACAACATGTTGGATGACATACACAATCATTGGAAAAGGGCTGAAGCTGTGAGGATCAAGTGCTTGGGAGTGCCAACTCTTGATATGGACAATATATGTTTCCACCTTGAGGTTTGAACCAAATCCATTCCTCATGTATCCAATCCAACATAATTTTTTCTTTTTCTTTTTTTTTTTTTTCTCAAGATCAACTTTTACAAAGAAATTACCTGATGTGCGCTTTAGTTTCTCTCTAGGATAAGTCTGGTGGGAAGATTATATATCGCCATATCAATGTCGTTCTTTTATATCGTGGTCGAAACTACGATCCCAAGAATCGACCAGCCATCCCTCTTATGTTGTGGAAACCTTATGCACCAATATATCCAAAGCTTGTGAAGAATGTGGCTGATGGCTTGTCATTTGAAGAAACAAAGGAAATGAGAAGCAGAGGATTGAATTCCCCTCCTCTAATGAAACTTAGTAAGTAA

mRNA sequence

ATGACGTGGTTACCCTCGCCTCGCCCCACTCAAACGTCGCCGTATAGCGCTTCTTCTCTTCTCTACATCTCTGCAAAACTGCAACTTCATTACACCCTCGTCGAGCTGCCGGAGATGGCGATTCATTTCCGAACACGAATCAGATTTCCAGATCACTGGAACCAGAAACCCAGTGGCTATTTCCTCTTGATCTACCGATTCATCTCCAAATCTCTGTCTGAAAGCACCTACGATCCTCCATTTTCGCCTGCTTCCAAGCTCCAAAAACCGAAGAACAAGAAAACCCACGATGGAAATTCGAATTCAAACAAAAACCCCACTCTCCCTCTCCAATCAATCGCCCAAATTCTCACCGTTTGGCCCGGGCCGACTCGACCGGAAATGGACCGGAACTTCGGCCCCACGGAGGTGGAGGTGAAGATAAACGAAGTGTTAGAGGAGAGGAGACGGATTCTTGGAGACCCATTAACGGAGGAGGAAGTTGCAGAGCTGGTGGAACAGTATCGGCATAACAATTGCTCCCGGCAAATCAATCTTGGGAAGGGTGGAGTTACTCACAACATGTTGGATGACATACACAATCATTGGAAAAGGGCTGAAGCTGTGAGGATCAAGTGCTTGGGAGTGCCAACTCTTGATATGGACAATATATGTTTCCACCTTGAGGATAAGTCTGGTGGGAAGATTATATATCGCCATATCAATGTCGTTCTTTTATATCGTGGTCGAAACTACGATCCCAAGAATCGACCAGCCATCCCTCTTATGTTGTGGAAACCTTATGCACCAATATATCCAAAGCTTGTGAAGAATGTGGCTGATGGCTTGTCATTTGAAGAAACAAAGGAAATGAGAAGCAGAGGATTGAATTCCCCTCCTCTAATGAAACTTAGTAAGTAA

Coding sequence (CDS)

ATGACGTGGTTACCCTCGCCTCGCCCCACTCAAACGTCGCCGTATAGCGCTTCTTCTCTTCTCTACATCTCTGCAAAACTGCAACTTCATTACACCCTCGTCGAGCTGCCGGAGATGGCGATTCATTTCCGAACACGAATCAGATTTCCAGATCACTGGAACCAGAAACCCAGTGGCTATTTCCTCTTGATCTACCGATTCATCTCCAAATCTCTGTCTGAAAGCACCTACGATCCTCCATTTTCGCCTGCTTCCAAGCTCCAAAAACCGAAGAACAAGAAAACCCACGATGGAAATTCGAATTCAAACAAAAACCCCACTCTCCCTCTCCAATCAATCGCCCAAATTCTCACCGTTTGGCCCGGGCCGACTCGACCGGAAATGGACCGGAACTTCGGCCCCACGGAGGTGGAGGTGAAGATAAACGAAGTGTTAGAGGAGAGGAGACGGATTCTTGGAGACCCATTAACGGAGGAGGAAGTTGCAGAGCTGGTGGAACAGTATCGGCATAACAATTGCTCCCGGCAAATCAATCTTGGGAAGGGTGGAGTTACTCACAACATGTTGGATGACATACACAATCATTGGAAAAGGGCTGAAGCTGTGAGGATCAAGTGCTTGGGAGTGCCAACTCTTGATATGGACAATATATGTTTCCACCTTGAGGATAAGTCTGGTGGGAAGATTATATATCGCCATATCAATGTCGTTCTTTTATATCGTGGTCGAAACTACGATCCCAAGAATCGACCAGCCATCCCTCTTATGTTGTGGAAACCTTATGCACCAATATATCCAAAGCTTGTGAAGAATGTGGCTGATGGCTTGTCATTTGAAGAAACAAAGGAAATGAGAAGCAGAGGATTGAATTCCCCTCCTCTAATGAAACTTAGTAAGTAA

Protein sequence

MTWLPSPRPTQTSPYSASSLLYISAKLQLHYTLVELPEMAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNSNSNKNPTLPLQSIAQILTVWPGPTRPEMDRNFGPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK

Homology

[Close]

BLAST of Lag0038032 vs. NCBI nr
Match: KAG6592037.1 (CRS2-associated factor 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 441.4 bits (1134), Expect = 6.1e-120
Identity = 229/326 (70.25%), Postives = 247/326 (75.77%), Query Frame = 0


Query: 1   MTWLPSPRPTQTSPYSASSLLYISAKLQ---LHYTLVELPEMAIHFRTRIRFPDHWNQKP 60
           MTWLPSP   +T+ Y      + S  LQ      TLVE  +MAIHFRTRI+FPDH NQK 
Sbjct: 1   MTWLPSPCTAKTTSYEVP---FFSPSLQDCNFQPTLVEPSKMAIHFRTRIKFPDHSNQKS 60

Query: 61  SGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNSNSNKNPTLPLQS----- 120
           SGYFL I RF SKSLSE+ YDPPFSP SKLQK K KK  DGNSNS KN TLPL S     
Sbjct: 61  SGYFLSICRFFSKSLSETPYDPPFSPVSKLQKAKKKKIQDGNSNSIKNSTLPLHSDLPFD 120

Query: 121 -------------------IAQILTVWPGPTRPEMDRNFGPTEVEVKINEVLEERRRILG 180
                                +     PG    +      P+EVEVKINEVLEER+RILG
Sbjct: 121 FFYSYSETNPSVNPIGYRESPKFSPFGPGRLDRKWTGTSAPSEVEVKINEVLEERKRILG 180

Query: 181 DPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLD 240
           DPL+EEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHW+RAEAVRIKCLGVPTLD
Sbjct: 181 DPLSEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWRRAEAVRIKCLGVPTLD 240

Query: 241 MDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVA 300
           M+NICFHLEDKSGGKIIYRHIN++LLYRGRNY+P NRP IPLMLWKPYAPIYPKLVKNVA
Sbjct: 241 MNNICFHLEDKSGGKIIYRHINILLLYRGRNYNPANRPTIPLMLWKPYAPIYPKLVKNVA 300

[Close]

BLAST of Lag0038032 vs. NCBI nr
Match: XP_038900170.1 (CRS2-associated factor 2, mitochondrial [Benincasa hispida])

HSP 1 Score: 437.2 bits (1123), Expect = 1.2e-118
Identity = 216/285 (75.79%), Postives = 232/285 (81.40%), Query Frame = 0


Query: 39  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDG 98
           MA HFRTRIRFPDH N+KPSGYF  I RFISKSLSES+YDPPF+P SKL+K K KKTHDG
Sbjct: 2   MATHFRTRIRFPDHSNKKPSGYFFFICRFISKSLSESSYDPPFTPVSKLRKAKKKKTHDG 61

Query: 99  NSNSNKNPTLPLQS------------------------IAQILTVWPGPTRPEMDRNFGP 158
           NSNSN+ PTLPLQS                          +     PG    +      P
Sbjct: 62  NSNSNEKPTLPLQSDLPFDFFYSYSETNPSVNPIGYRESPKFSPFGPGRLDRKWTGTSAP 121

Query: 159 TEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHN 218
             VEVKINEVLEER+RILGDPL+EEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHN
Sbjct: 122 AVVEVKINEVLEERKRILGDPLSEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHN 181

Query: 219 HWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIP 278
           HW+RAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHIN++LLYRGRNYDPKNRP IP
Sbjct: 182 HWRRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNRPTIP 241

Query: 279 LMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK 300
           LMLWKPYAPIYPKLVKNVADGLSF+ETKEMR+RGLNSPPLMKL++
Sbjct: 242 LMLWKPYAPIYPKLVKNVADGLSFDETKEMRNRGLNSPPLMKLTR 286

[Close]

BLAST of Lag0038032 vs. NCBI nr
Match: XP_022139762.1 (CRS2-associated factor 2, mitochondrial [Momordica charantia])

HSP 1 Score: 430.3 bits (1105), Expect = 1.4e-116
Identity = 215/283 (75.97%), Postives = 229/283 (80.92%), Query Frame = 0


Query: 41  IHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNS 100
           IHFRTRIRFP+H NQKP GYFLLI RFISKS +E  YDPPFSPASKL+K KNKKTH+GNS
Sbjct: 2   IHFRTRIRFPNHSNQKPCGYFLLICRFISKSPAEDAYDPPFSPASKLRKAKNKKTHEGNS 61

Query: 101 NSNKNPTLPLQS------------------------IAQILTVWPGPTRPEMDRNFGPTE 160
           +SNKNPTLPL S                          +     PG    +      P  
Sbjct: 62  SSNKNPTLPLHSDLPFDFFYSYSETNPSVEPIGFRESPKFSPFGPGRLDRKWSGTSAPAG 121

Query: 161 VEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHW 220
           +EVKI EV EER RILGDPL+EEEVAELVE+YRH+NCSRQINLGKGGVTHNMLDDIHNHW
Sbjct: 122 MEVKIREVSEERNRILGDPLSEEEVAELVEEYRHDNCSRQINLGKGGVTHNMLDDIHNHW 181

Query: 221 KRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLM 280
           KRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINV+LLYRGRNYDPKNRPAIPLM
Sbjct: 182 KRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVLLLYRGRNYDPKNRPAIPLM 241

Query: 281 LWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK 300
           LWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKL++
Sbjct: 242 LWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLTR 284

[Close]

BLAST of Lag0038032 vs. NCBI nr
Match: XP_004151957.1 (CRS2-associated factor 2, mitochondrial [Cucumis sativus] >KGN57976.1 hypothetical protein Csa_010344 [Cucumis sativus])

HSP 1 Score: 429.1 bits (1102), Expect = 3.1e-116
Identity = 219/289 (75.78%), Postives = 234/289 (80.97%), Query Frame = 0


Query: 39  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNK--KTH 98
           MAIHFRTRIRFPDH N KPSGYF  I RFISKSLSESTYDPPFSP SKLQK K K  K H
Sbjct: 1   MAIHFRTRIRFPDHSNHKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKAKKKKEKAH 60

Query: 99  DGNSNSNKNPTLPLQSIAQILTVWP----------------------GPTRPEMDRNF-- 158
            GNSNSN+NPTLPL+S       +                       GP R  +DR +  
Sbjct: 61  GGNSNSNENPTLPLKSYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGR--LDRKWTG 120

Query: 159 --GPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLD 218
              P+ VEV INEVLEER+RILGDPL +EEVAELVEQYRH++CSRQINLGKGGVTHNMLD
Sbjct: 121 TSAPSAVEVNINEVLEERKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLD 180

Query: 219 DIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNR 278
           DIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHIN++LLYRGRNYDPKNR
Sbjct: 181 DIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNR 240

Query: 279 PAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK 300
           PAIPLMLWKPYAPIYPKLVKNVAD LSF+ETKEMRSRGLNSPPLMKL++
Sbjct: 241 PAIPLMLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTR 287

[Close]

BLAST of Lag0038032 vs. NCBI nr
Match: XP_023535436.1 (CRS2-associated factor 2, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 428.7 bits (1101), Expect = 4.1e-116
Identity = 215/285 (75.44%), Postives = 228/285 (80.00%), Query Frame = 0


Query: 39  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDG 98
           MAIHFRTRIRFPDH NQK SGYFLLI RF SKSLSE+ YDPPFSP SKLQK K KK  DG
Sbjct: 1   MAIHFRTRIRFPDHSNQKSSGYFLLICRFFSKSLSETPYDPPFSPVSKLQKAKKKKIQDG 60

Query: 99  NSNSNKNPTLPLQS------------------------IAQILTVWPGPTRPEMDRNFGP 158
           NSNS KN TLPL S                          +     PG    +      P
Sbjct: 61  NSNSIKNSTLPLHSDLPFDFFYSYSETNPSVNPIGYRESPKFSPFGPGRLDRKWTGTSAP 120

Query: 159 TEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHN 218
           +EVEVKINEVLEER+RILGDPL+EEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHN
Sbjct: 121 SEVEVKINEVLEERKRILGDPLSEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHN 180

Query: 219 HWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIP 278
           HW+R EAVRIKCLGVPTLDM+NICFHLEDKSGGKIIYRHIN++LLYRGRNYDP+NRP IP
Sbjct: 181 HWRRGEAVRIKCLGVPTLDMNNICFHLEDKSGGKIIYRHINILLLYRGRNYDPENRPTIP 240

Query: 279 LMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK 300
           LMLWKPYAPIYPKLVKNVADGLSFEETKEMR RGLNSPPLMKL++
Sbjct: 241 LMLWKPYAPIYPKLVKNVADGLSFEETKEMRGRGLNSPPLMKLTR 285

[Close]

BLAST of Lag0038032 vs. ExPASy Swiss-Prot
Match: Q9FFU1 (CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g54890 PE=2 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 3.8e-80
Identity = 149/275 (54.18%), Postives = 192/275 (69.82%), Query Frame = 0


Query: 55  QKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNSNSNKNPTLPLQSIA 114
           ++P   FL +    ++ +S   YDPPFSP SK  KP  +K        +++  L      
Sbjct: 12  KEPKDLFLFLCNLRARCVSTDDYDPPFSPLSKPTKPPKEKKKQKTKKQDQSSELVNDLKI 71

Query: 115 QILTVWP-------GPTRPEMD----------RNFGPTEV-------------EVKINEV 174
            +++  P         T PE++            FGP  +             E+  ++ 
Sbjct: 72  PVISDLPFDFRYSYSETNPEIEPIGFREPKRFSPFGPGRLDRKWTGTTALASPEIDQSQW 131

Query: 175 LEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRI 234
           +EER R+LG+ LTE+EV EL+E+YRH++C+RQINLGKGGVTHNM+DDIHNHWK+AEAVRI
Sbjct: 132 VEERARVLGETLTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKKAEAVRI 191

Query: 235 KCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPI 294
           KCLGVPTLDMDNICFHLE+KSGGKI+YR+IN+++LYRGRNYDPK+RP IPLMLWKP+ PI
Sbjct: 192 KCLGVPTLDMDNICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRPIIPLMLWKPHPPI 251

Query: 295 YPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK 300
           YP+LVKNVADGL FEETKEMR+RGL+SP LMKL++
Sbjct: 252 YPRLVKNVADGLEFEETKEMRNRGLHSPALMKLTR 286

[Close]

BLAST of Lag0038032 vs. ExPASy Swiss-Prot
Match: Q0J7J7 (CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0188000 PE=2 SV=2)

HSP 1 Score: 278.1 bits (710), Expect = 1.2e-73
Identity = 123/152 (80.92%), Postives = 144/152 (94.74%), Query Frame = 0


Query: 148 RRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCL 207
           R  +LG+PL EEEVA+LVE+YRH++CSRQINLGKGGVTHNM+DDIHNHWKRAEAVRIKCL
Sbjct: 137 REEVLGEPLAEEEVAQLVERYRHSDCSRQINLGKGGVTHNMIDDIHNHWKRAEAVRIKCL 196

Query: 208 GVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPK 267
           GVPTLDMDNICFHLEDK+GGK+IYR+IN+++LYRGRNYDPK RP IPLMLWKP APIYP+
Sbjct: 197 GVPTLDMDNICFHLEDKTGGKVIYRNINILILYRGRNYDPKQRPQIPLMLWKPLAPIYPR 256

Query: 268 LVKNVADGLSFEETKEMRSRGLNSPPLMKLSK 300
           LV+NVADGL+FE+TKE+R+ GLNS PLMKL++
Sbjct: 257 LVQNVADGLTFEKTKELRNTGLNSSPLMKLTR 288

[Close]

BLAST of Lag0038032 vs. ExPASy Swiss-Prot
Match: Q6Z4U2 (CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0174900 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 6.7e-53
Identity = 94/153 (61.44%), Postives = 119/153 (77.78%), Query Frame = 0


Query: 147 ERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKC 206
           ER R+LG+PLT  E A LV + + +   +QINLG+ G+THNML+DIHNHWK  EAVR+KC
Sbjct: 148 ERERVLGEPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKC 207

Query: 207 LGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYP 266
           LGVPT+DM N+C  LEDK+GG II+RH   ++LYRGR+Y+PK RP IPLMLWKP  P+YP
Sbjct: 208 LGVPTVDMQNVCHQLEDKTGGLIIHRHGGQLILYRGRHYNPKKRPVIPLMLWKPAEPVYP 267

Query: 267 KLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK 300
           +L+K   +GL+ EETKEMR +GL  P L KL+K
Sbjct: 268 RLIKTTIEGLTVEETKEMRKKGLYVPVLTKLAK 300

[Close]

BLAST of Lag0038032 vs. ExPASy Swiss-Prot
Match: Q8VYD9 (CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g31010 PE=2 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.5e-52
Identity = 96/160 (60.00%), Postives = 120/160 (75.00%), Query Frame = 0


Query: 145 LEERRR-----ILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRA 204
           LEE+RR     I G  LTE E   LVE  + N   RQ+NLG+ G+THNML+D++NHWK A
Sbjct: 143 LEEKRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHA 202

Query: 205 EAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWK 264
           EAVR+KCLGVPTLDM N+ FHLEDK+ G+++ +H   ++LYRGRNYDPK RP IPLMLWK
Sbjct: 203 EAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPLMLWK 262

Query: 265 PYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK 300
           P+ P+YP+L+K   DGLS +ETK MR +GL  P L KL+K
Sbjct: 263 PHEPVYPRLIKTTIDGLSIDETKAMRKKGLAVPALTKLAK 302

[Close]

BLAST of Lag0038032 vs. ExPASy Swiss-Prot
Match: Q84N48 (CRS2-associated factor 2, chloroplastic OS=Zea mays OX=4577 GN=CAF2 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.6e-46
Identity = 84/152 (55.26%), Postives = 112/152 (73.68%), Query Frame = 0


Query: 148 RRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCL 207
           R  +LG+PLT  EV  LV+ +  +N  RQ+N+G+ G+THNML+ IH HW+R E  +++C 
Sbjct: 226 REEVLGEPLTPSEVRALVKPHISHN--RQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCR 285

Query: 208 GVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPK 267
           GVPT+DM N+C+HLE+KSGGK+I+R   VV LYRGR+YDPK RP  PLMLWKP  P+YPK
Sbjct: 286 GVPTVDMKNLCYHLEEKSGGKVIHRVGGVVFLYRGRHYDPKTRPRYPLMLWKPATPVYPK 345

Query: 268 LVKNVADGLSFEETKEMRSRGLNSPPLMKLSK 300
           L+K   DG + EE  EMR +G +  P+ KL+K
Sbjct: 346 LIKEAPDGFTKEEADEMRRKGRDLLPICKLAK 375

[Close]

BLAST of Lag0038032 vs. ExPASy TrEMBL
Match: A0A6J1CEV8 (CRS2-associated factor 2, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111010593 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 6.8e-117
Identity = 215/283 (75.97%), Postives = 229/283 (80.92%), Query Frame = 0


Query: 41  IHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNS 100
           IHFRTRIRFP+H NQKP GYFLLI RFISKS +E  YDPPFSPASKL+K KNKKTH+GNS
Sbjct: 2   IHFRTRIRFPNHSNQKPCGYFLLICRFISKSPAEDAYDPPFSPASKLRKAKNKKTHEGNS 61

Query: 101 NSNKNPTLPLQS------------------------IAQILTVWPGPTRPEMDRNFGPTE 160
           +SNKNPTLPL S                          +     PG    +      P  
Sbjct: 62  SSNKNPTLPLHSDLPFDFFYSYSETNPSVEPIGFRESPKFSPFGPGRLDRKWSGTSAPAG 121

Query: 161 VEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHW 220
           +EVKI EV EER RILGDPL+EEEVAELVE+YRH+NCSRQINLGKGGVTHNMLDDIHNHW
Sbjct: 122 MEVKIREVSEERNRILGDPLSEEEVAELVEEYRHDNCSRQINLGKGGVTHNMLDDIHNHW 181

Query: 221 KRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLM 280
           KRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINV+LLYRGRNYDPKNRPAIPLM
Sbjct: 182 KRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVLLLYRGRNYDPKNRPAIPLM 241

Query: 281 LWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK 300
           LWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKL++
Sbjct: 242 LWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLTR 284

[Close]

BLAST of Lag0038032 vs. ExPASy TrEMBL
Match: A0A0A0LD46 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G417680 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.5e-116
Identity = 219/289 (75.78%), Postives = 234/289 (80.97%), Query Frame = 0


Query: 39  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNK--KTH 98
           MAIHFRTRIRFPDH N KPSGYF  I RFISKSLSESTYDPPFSP SKLQK K K  K H
Sbjct: 1   MAIHFRTRIRFPDHSNHKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKAKKKKEKAH 60

Query: 99  DGNSNSNKNPTLPLQSIAQILTVWP----------------------GPTRPEMDRNF-- 158
            GNSNSN+NPTLPL+S       +                       GP R  +DR +  
Sbjct: 61  GGNSNSNENPTLPLKSYLPFDFFYSYSETNPLVSPIGYRESPKFSPFGPGR--LDRKWTG 120

Query: 159 --GPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLD 218
              P+ VEV INEVLEER+RILGDPL +EEVAELVEQYRH++CSRQINLGKGGVTHNMLD
Sbjct: 121 TSAPSAVEVNINEVLEERKRILGDPLLDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLD 180

Query: 219 DIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNR 278
           DIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHIN++LLYRGRNYDPKNR
Sbjct: 181 DIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNYDPKNR 240

Query: 279 PAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK 300
           PAIPLMLWKPYAPIYPKLVKNVAD LSF+ETKEMRSRGLNSPPLMKL++
Sbjct: 241 PAIPLMLWKPYAPIYPKLVKNVADDLSFDETKEMRSRGLNSPPLMKLTR 287

[Close]

BLAST of Lag0038032 vs. ExPASy TrEMBL
Match: A0A5D3BGH7 (CRS2-associated factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00550 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.4e-116
Identity = 218/288 (75.69%), Postives = 236/288 (81.94%), Query Frame = 0


Query: 39  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQK-PKNKKTHD 98
           MAIHFRTRIRFPD  NQKPSGYF  I RFISKSLSESTYDPPFSP SKLQK  K KK H 
Sbjct: 1   MAIHFRTRIRFPDRSNQKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKAKKKKKAHG 60

Query: 99  GNSNSNKNPTLPLQSIAQILTVWP----------------------GPTRPEMDRNF--- 158
           GNSNSN+NPTLPL+S       +                       GP R  +DR +   
Sbjct: 61  GNSNSNENPTLPLKSYLPFDFFYSYSETNPLVNPIGYRESPKFSPFGPGR--LDRKWTGT 120

Query: 159 -GPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDD 218
             P+ VEV INEVLEER+RILGDPL++EEVAELVEQYRH++CSRQINLGKGGVTHNMLDD
Sbjct: 121 SAPSAVEVNINEVLEERKRILGDPLSDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDD 180

Query: 219 IHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRP 278
           IHNHWKRAEAVRIKCLGVPTLDM+NICFHLEDKSGGKIIYR+IN++LLYRGRNYDPKNRP
Sbjct: 181 IHNHWKRAEAVRIKCLGVPTLDMENICFHLEDKSGGKIIYRYINILLLYRGRNYDPKNRP 240

Query: 279 AIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK 300
           AIPLMLWKPYAPIYPKLVKNVADGLSF+ETKEMRSRGLNSPPLMKL++
Sbjct: 241 AIPLMLWKPYAPIYPKLVKNVADGLSFDETKEMRSRGLNSPPLMKLTR 286

[Close]

BLAST of Lag0038032 vs. ExPASy TrEMBL
Match: A0A6J1IH58 (CRS2-associated factor 2, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111476902 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.4e-116
Identity = 215/285 (75.44%), Postives = 227/285 (79.65%), Query Frame = 0


Query: 39  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDG 98
           MAIH RTRIRFPDH NQK SGYFL I RF SKSLSE  YDPPFSP SKLQK K KK  DG
Sbjct: 1   MAIHLRTRIRFPDHLNQKSSGYFLSICRFFSKSLSEIPYDPPFSPVSKLQKAKKKKIQDG 60

Query: 99  NSNSNKNPTLPLQS------------------------IAQILTVWPGPTRPEMDRNFGP 158
           NSNS KNPTLPL S                          +     PG    +      P
Sbjct: 61  NSNSIKNPTLPLHSDLPFDFFYSYSETNPSVNPIGYRESPKFSPFGPGRLDRKWTGTSAP 120

Query: 159 TEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHN 218
           +EVEVKINEVLEER+RILGDPL+EEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHN
Sbjct: 121 SEVEVKINEVLEERKRILGDPLSEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHN 180

Query: 219 HWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIP 278
           HW+RAEAVRIKCLGVPTLDM+NICFHLEDKSGGKIIYRHIN++LLYRGRNYDP+NRP IP
Sbjct: 181 HWRRAEAVRIKCLGVPTLDMNNICFHLEDKSGGKIIYRHINILLLYRGRNYDPENRPTIP 240

Query: 279 LMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK 300
           LMLWKPYAPIYPKLVKNVADGLSFEETKEMR RGLNSPPLMKL++
Sbjct: 241 LMLWKPYAPIYPKLVKNVADGLSFEETKEMRGRGLNSPPLMKLTR 285

[Close]

BLAST of Lag0038032 vs. ExPASy TrEMBL
Match: A0A1S3BYZ9 (CRS2-associated factor 2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494948 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.4e-116
Identity = 218/288 (75.69%), Postives = 236/288 (81.94%), Query Frame = 0


Query: 39  MAIHFRTRIRFPDHWNQKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQK-PKNKKTHD 98
           MAIHFRTRIRFPD  NQKPSGYF  I RFISKSLSESTYDPPFSP SKLQK  K KK H 
Sbjct: 1   MAIHFRTRIRFPDRSNQKPSGYFFFISRFISKSLSESTYDPPFSPVSKLQKAKKKKKAHG 60

Query: 99  GNSNSNKNPTLPLQSIAQILTVWP----------------------GPTRPEMDRNF--- 158
           GNSNSN+NPTLPL+S       +                       GP R  +DR +   
Sbjct: 61  GNSNSNENPTLPLKSYLPFDFFYSYSETNPLVNPIGYRESPKFSPFGPGR--LDRKWTGT 120

Query: 159 -GPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDD 218
             P+ VEV INEVLEER+RILGDPL++EEVAELVEQYRH++CSRQINLGKGGVTHNMLDD
Sbjct: 121 SAPSAVEVNINEVLEERKRILGDPLSDEEVAELVEQYRHSDCSRQINLGKGGVTHNMLDD 180

Query: 219 IHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRP 278
           IHNHWKRAEAVRIKCLGVPTLDM+NICFHLEDKSGGKIIYR+IN++LLYRGRNYDPKNRP
Sbjct: 181 IHNHWKRAEAVRIKCLGVPTLDMENICFHLEDKSGGKIIYRYINILLLYRGRNYDPKNRP 240

Query: 279 AIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK 300
           AIPLMLWKPYAPIYPKLVKNVADGLSF+ETKEMRSRGLNSPPLMKL++
Sbjct: 241 AIPLMLWKPYAPIYPKLVKNVADGLSFDETKEMRSRGLNSPPLMKLTR 286

[Close]

BLAST of Lag0038032 vs. TAIR 10
Match: AT5G54890.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 299.7 bits (766), Expect = 2.7e-81
Identity = 149/275 (54.18%), Postives = 192/275 (69.82%), Query Frame = 0


Query: 55  QKPSGYFLLIYRFISKSLSESTYDPPFSPASKLQKPKNKKTHDGNSNSNKNPTLPLQSIA 114
           ++P   FL +    ++ +S   YDPPFSP SK  KP  +K        +++  L      
Sbjct: 12  KEPKDLFLFLCNLRARCVSTDDYDPPFSPLSKPTKPPKEKKKQKTKKQDQSSELVNDLKI 71

Query: 115 QILTVWP-------GPTRPEMD----------RNFGPTEV-------------EVKINEV 174
            +++  P         T PE++            FGP  +             E+  ++ 
Sbjct: 72  PVISDLPFDFRYSYSETNPEIEPIGFREPKRFSPFGPGRLDRKWTGTTALASPEIDQSQW 131

Query: 175 LEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRI 234
           +EER R+LG+ LTE+EV EL+E+YRH++C+RQINLGKGGVTHNM+DDIHNHWK+AEAVRI
Sbjct: 132 VEERARVLGETLTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKKAEAVRI 191

Query: 235 KCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPI 294
           KCLGVPTLDMDNICFHLE+KSGGKI+YR+IN+++LYRGRNYDPK+RP IPLMLWKP+ PI
Sbjct: 192 KCLGVPTLDMDNICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRPIIPLMLWKPHPPI 251

Query: 295 YPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK 300
           YP+LVKNVADGL FEETKEMR+RGL+SP LMKL++
Sbjct: 252 YPRLVKNVADGLEFEETKEMRNRGLHSPALMKLTR 286

[Close]

BLAST of Lag0038032 vs. TAIR 10
Match: AT4G31010.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-53
Identity = 96/160 (60.00%), Postives = 120/160 (75.00%), Query Frame = 0


Query: 145 LEERRR-----ILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRA 204
           LEE+RR     I G  LTE E   LVE  + N   RQ+NLG+ G+THNML+D++NHWK A
Sbjct: 143 LEEKRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHA 202

Query: 205 EAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWK 264
           EAVR+KCLGVPTLDM N+ FHLEDK+ G+++ +H   ++LYRGRNYDPK RP IPLMLWK
Sbjct: 203 EAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPLMLWK 262

Query: 265 PYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK 300
           P+ P+YP+L+K   DGLS +ETK MR +GL  P L KL+K
Sbjct: 263 PHEPVYPRLIKTTIDGLSIDETKAMRKKGLAVPALTKLAK 302

[Close]

BLAST of Lag0038032 vs. TAIR 10
Match: AT4G31010.2 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 205.3 bits (521), Expect = 6.9e-53
Identity = 95/158 (60.13%), Postives = 118/158 (74.68%), Query Frame = 0


Query: 145 LEERRR-----ILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRA 204
           LEE+RR     I G  LTE E   LVE  + N   RQ+NLG+ G+THNML+D++NHWK A
Sbjct: 143 LEEKRRKVREKIQGASLTEAERKFLVELCQRNKTKRQVNLGRDGLTHNMLNDVYNHWKHA 202

Query: 205 EAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWK 264
           EAVR+KCLGVPTLDM N+ FHLEDK+ G+++ +H   ++LYRGRNYDPK RP IPLMLWK
Sbjct: 203 EAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPLMLWK 262

Query: 265 PYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKL 298
           P+ P+YP+L+K   DGLS +ETK MR +GL  P L KL
Sbjct: 263 PHEPVYPRLIKTTIDGLSIDETKAMRKKGLAVPALTKL 300

[Close]

BLAST of Lag0038032 vs. TAIR 10
Match: AT2G20020.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 176.4 bits (446), Expect = 3.4e-44
Identity = 88/179 (49.16%), Postives = 116/179 (64.80%), Query Frame = 0


Query: 121 PGPTRPEMDRNFGPTEVEVKINEVLEERRRILGDPLTEEEVAELVEQYRHNNCSRQINLG 180
           PGP RP      GP  V  K          ILG+PLT+EEV ELV        +RQ+N+G
Sbjct: 220 PGPFRP----GVGPRYVYSK--------EEILGEPLTKEEVRELVTSCL--KTTRQLNMG 279

Query: 181 KGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINVVLLY 240
           + G+THNML++IH+ WKR    +IKC GV T+DMDN+C  LE+K GGK+IYR   V+ L+
Sbjct: 280 RDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQLEEKIGGKVIYRRGGVLFLF 339

Query: 241 RGRNYDPKNRPAIPLMLWKPYAPIYPKLVKNVADGLSFEETKEMRSRGLNSPPLMKLSK 300
           RGRNY+ + RP  PLMLWKP AP+YP+L++ V +GL+ +E   MR +G    P+ KL K
Sbjct: 340 RGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQEATNMRRKGRELMPICKLGK 384

[Close]

BLAST of Lag0038032 vs. TAIR 10
Match: AT1G23400.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 173.7 bits (439), Expect = 2.2e-43
Identity = 79/152 (51.97%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 148 RRRILGDPLTEEEVAELVEQYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCL 207
           R  +LG+PL   E   L++ + H+N  RQ+NLG+ G THNML+ IH+HWKR    +++C 
Sbjct: 195 REEVLGEPLKRWEKGMLIKPHMHDN--RQVNLGRDGFTHNMLELIHSHWKRRRVCKVRCK 254

Query: 208 GVPTLDMDNICFHLEDKSGGKIIYRHINVVLLYRGRNYDPKNRPAIPLMLWKPYAPIYPK 267
           GVPT+DM+N+C  LE+K+GG+II+R   VV L+RGRNY+ + RP  PLMLWKP AP+YPK
Sbjct: 255 GVPTVDMNNVCRVLEEKTGGEIIHRVGGVVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPK 314

Query: 268 LVKNVADGLSFEETKEMRSRGLNSPPLMKLSK 300
           L++ V +GL+ EE  E R +G +  P+ KLSK
Sbjct: 315 LIQEVPEGLTKEEAHEFRVKGKSLRPICKLSK 344

The following BLAST results are available for this feature:

BLAST of Lag0038032 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6592037.1	6.1e-120	70.25	CRS2-associated factor 2, mitochondrial, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_038900170.1	1.2e-118	75.79	CRS2-associated factor 2, mitochondrial [Benincasa hispida]	[more]
XP_022139762.1	1.4e-116	75.97	CRS2-associated factor 2, mitochondrial [Momordica charantia]	[more]
XP_004151957.1	3.1e-116	75.78	CRS2-associated factor 2, mitochondrial [Cucumis sativus] >KGN57976.1 hypothetic...	[more]
XP_023535436.1	4.1e-116	75.44	CRS2-associated factor 2, mitochondrial [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lag0038032 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFU1	3.8e-80	54.18	CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g5...	[more]
Q0J7J7	1.2e-73	80.92	CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q6Z4U2	6.7e-53	61.44	CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q8VYD9	2.5e-52	60.00	CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g3...	[more]
Q84N48	1.6e-46	55.26	CRS2-associated factor 2, chloroplastic OS=Zea mays OX=4577 GN=CAF2 PE=1 SV=1	[more]

BLAST of Lag0038032 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CEV8	6.8e-117	75.97	CRS2-associated factor 2, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A0A0LD46	1.5e-116	75.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G417680 PE=4 SV=1	[more]
A0A5D3BGH7	3.4e-116	75.69	CRS2-associated factor 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A6J1IH58	3.4e-116	75.44	CRS2-associated factor 2, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111476...	[more]
A0A1S3BYZ9	3.4e-116	75.69	CRS2-associated factor 2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494948 ...	[more]

BLAST of Lag0038032 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54890.1	2.7e-81	54.18	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT4G31010.1	1.8e-53	60.00	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT4G31010.2	6.9e-53	60.13	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT2G20020.1	3.4e-44	49.16	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT1G23400.1	2.2e-43	51.97	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001890	RNA-binding, CRM domain	SMART	SM01103	CRS1_YhbY_2	coord: 156..241 e-value: 1.3E-19 score: 81.1
IPR001890	RNA-binding, CRM domain	PFAM	PF01985	CRS1_YhbY	coord: 156..241 e-value: 4.7E-20 score: 71.5
IPR001890	RNA-binding, CRM domain	PROSITE	PS51295	CRM	coord: 154..252 score: 18.598814
IPR035920	YhbY-like superfamily	GENE3D	3.30.110.60		coord: 155..252 e-value: 3.4E-20 score: 73.9
IPR035920	YhbY-like superfamily	SUPERFAMILY	75471	YhbY-like	coord: 155..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..107
None	No IPR available	PANTHER	PTHR46247:SF4	CRS2-ASSOCIATED FACTOR 2, MITOCHONDRIAL	coord: 132..299
IPR044599	CRS2-associated factor, plant	PANTHER	PTHR46247	CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC	coord: 132..299

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0038032.1	Lag0038032.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0003723	RNA binding