Lag0037920 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0037920
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr2: 10587334 .. 10588680 (+)
RNA-Seq ExpressionLag0037920
SyntenyLag0037920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAACGACTCGGCAATGCCCTTGGTACTTTCGAAGATGCCGACAACAGAAATGGATTTCTTTTTTGGGGATCCAGCCTTCGTTTGAAGGTTCGTTTGGATCTGAATCGTCCTGTACGCAGAGGGATCCGGATTTTTCCAGATGGTCCGTTGAGCGGTCTTTGGGTTCCTATTCGGTATGAAAGGTTGCCGGAATTGTGCTCTTATTGTGGGCTCATTACTCATTCTTCGCGGGGTTGTGCTATGTTTTTGCAGTCGGAAAATAGAGCTCGTCTTTTTCAACAGTACGGGGACTGGCTGAGGTATACAGGGAGAGGAATGACTCTGCCTCCAGTTCTGATTCAGGAAGACAACTCTGTTCATCCTCCGAATGTCGCTCAGGGTCAAAGGATTTCAATGGATGTAGTTCCAACTTCAGCCTCTGACCCGACCGTAAATGAACTACCAAGGAATCGTTTCAACGGGATTCGTATCTGTGAACCTGCTGTTGCACCATCTCAACAATCGCATCGTTCAACCTTGCAAGACTCTCGGCGACTAAAAGGTAAGGAAAAAATCTTGGAAGTACAGACCAAAAGGAAAATGGCAATGGAGGATTTCGATTCACGGTGGCGGCCGAGAAGCTCGAACGGGAGTCTTCCTTCGTCGGAGATCCACAGCGAGAAACGGCTGAATTTTTTCAACGGTCAGGGCATTAATTTGCAGCATTTAAAGGGTAATACGGTTTCAAACGGCCTTCTTAATGGAGAGGAAGTCGGGGAGGGCAGTAATCGTCGCTTGTCCAGGAATTTGGTTACGGATTTTCAGCGCTCTGATCCAATTCCTTTGGGCCTCCGGAGGGATAAAGCCCATTTAAAGGAGGCTGATCCTGAGATTGAAAGTGATCCTGAGATGCTTGAAGAATTCGGGTCTGATTCTGATGGATTGGGCAAATCAAGTGCAAATCAGGATGGATGTGGGCATGCTGCTGTAGCAGATCAGGTGCAGCTACAAAGTCAAGTGGGCTTTATGCAGGGATCAATGGAAGATGGGCCCATGGAGTTTGTGTTCGGGTCAAGTCAGTATCTTCAGTTGGACGAATCTGAGGGGGTCCGGAATTCGATGGACCCTTTGGTTTTTAAAGCTAAATTTCCAAAGCTTAGTCCTCCAAAGATGCAAGGTATTGGTTGGAAGAAGCGTGCTCGAGCTGGGATGGTTCCTCGTGGAATGAAGGCGGTTGAGGAACTTCAAAAGAGAAAGGATGGGCCCATTTTGTTTTCTCCGGGCCAAGTCAAACGTTCAAAACAGGATGACGATGATTTCGATAAGGCGGGGTCTGCTGGACAGCCCCGCCAAGAAATATGA

mRNA sequence

ATGGCGGAACGACTCGGCAATGCCCTTGGTACTTTCGAAGATGCCGACAACAGAAATGGATTTCTTTTTTGGGGATCCAGCCTTCGTTTGAAGGTTCGTTTGGATCTGAATCGTCCTGTACGCAGAGGGATCCGGATTTTTCCAGATGGTCCGTTGAGCGGTCTTTGGGTTCCTATTCGGTATGAAAGGTTGCCGGAATTGTGCTCTTATTGTGGGCTCATTACTCATTCTTCGCGGGGTTGTGCTATGTTTTTGCAGTCGGAAAATAGAGCTCGTCTTTTTCAACAGTACGGGGACTGGCTGAGGTATACAGGGAGAGGAATGACTCTGCCTCCAGTTCTGATTCAGGAAGACAACTCTGTTCATCCTCCGAATGTCGCTCAGGGTCAAAGGATTTCAATGGATGTAGTTCCAACTTCAGCCTCTGACCCGACCGTAAATGAACTACCAAGGAATCGTTTCAACGGGATTCGTATCTGTGAACCTGCTGTTGCACCATCTCAACAATCGCATCGTTCAACCTTGCAAGACTCTCGGCGACTAAAAGGTAAGGAAAAAATCTTGGAAGTACAGACCAAAAGGAAAATGGCAATGGAGGATTTCGATTCACGGTGGCGGCCGAGAAGCTCGAACGGGAGTCTTCCTTCGTCGGAGATCCACAGCGAGAAACGGCTGAATTTTTTCAACGGTCAGGGCATTAATTTGCAGCATTTAAAGGGTAATACGGTTTCAAACGGCCTTCTTAATGGAGAGGAAGTCGGGGAGGGCAGTAATCGTCGCTTGTCCAGGAATTTGGTTACGGATTTTCAGCGCTCTGATCCAATTCCTTTGGGCCTCCGGAGGGATAAAGCCCATTTAAAGGAGGCTGATCCTGAGATTGAAAGTGATCCTGAGATGCTTGAAGAATTCGGGTCTGATTCTGATGGATTGGGCAAATCAAGTGCAAATCAGGATGGATGTGGGCATGCTGCTGTAGCAGATCAGGTGCAGCTACAAAGTCAAGTGGGCTTTATGCAGGGATCAATGGAAGATGGGCCCATGGAGTTTGTGTTCGGGTCAAGTCAGTATCTTCAGTTGGACGAATCTGAGGGGGTCCGGAATTCGATGGACCCTTTGGTTTTTAAAGCTAAATTTCCAAAGCTTAGTCCTCCAAAGATGCAAGGTATTGGTTGGAAGAAGCGTGCTCGAGCTGGGATGGTTCCTCGTGGAATGAAGGCGGTTGAGGAACTTCAAAAGAGAAAGGATGGGCCCATTTTGTTTTCTCCGGGCCAAGTCAAACGTTCAAAACAGGATGACGATGATTTCGATAAGGCGGGGTCTGCTGGACAGCCCCGCCAAGAAATATGA

Coding sequence (CDS)

ATGGCGGAACGACTCGGCAATGCCCTTGGTACTTTCGAAGATGCCGACAACAGAAATGGATTTCTTTTTTGGGGATCCAGCCTTCGTTTGAAGGTTCGTTTGGATCTGAATCGTCCTGTACGCAGAGGGATCCGGATTTTTCCAGATGGTCCGTTGAGCGGTCTTTGGGTTCCTATTCGGTATGAAAGGTTGCCGGAATTGTGCTCTTATTGTGGGCTCATTACTCATTCTTCGCGGGGTTGTGCTATGTTTTTGCAGTCGGAAAATAGAGCTCGTCTTTTTCAACAGTACGGGGACTGGCTGAGGTATACAGGGAGAGGAATGACTCTGCCTCCAGTTCTGATTCAGGAAGACAACTCTGTTCATCCTCCGAATGTCGCTCAGGGTCAAAGGATTTCAATGGATGTAGTTCCAACTTCAGCCTCTGACCCGACCGTAAATGAACTACCAAGGAATCGTTTCAACGGGATTCGTATCTGTGAACCTGCTGTTGCACCATCTCAACAATCGCATCGTTCAACCTTGCAAGACTCTCGGCGACTAAAAGGTAAGGAAAAAATCTTGGAAGTACAGACCAAAAGGAAAATGGCAATGGAGGATTTCGATTCACGGTGGCGGCCGAGAAGCTCGAACGGGAGTCTTCCTTCGTCGGAGATCCACAGCGAGAAACGGCTGAATTTTTTCAACGGTCAGGGCATTAATTTGCAGCATTTAAAGGGTAATACGGTTTCAAACGGCCTTCTTAATGGAGAGGAAGTCGGGGAGGGCAGTAATCGTCGCTTGTCCAGGAATTTGGTTACGGATTTTCAGCGCTCTGATCCAATTCCTTTGGGCCTCCGGAGGGATAAAGCCCATTTAAAGGAGGCTGATCCTGAGATTGAAAGTGATCCTGAGATGCTTGAAGAATTCGGGTCTGATTCTGATGGATTGGGCAAATCAAGTGCAAATCAGGATGGATGTGGGCATGCTGCTGTAGCAGATCAGGTGCAGCTACAAAGTCAAGTGGGCTTTATGCAGGGATCAATGGAAGATGGGCCCATGGAGTTTGTGTTCGGGTCAAGTCAGTATCTTCAGTTGGACGAATCTGAGGGGGTCCGGAATTCGATGGACCCTTTGGTTTTTAAAGCTAAATTTCCAAAGCTTAGTCCTCCAAAGATGCAAGGTATTGGTTGGAAGAAGCGTGCTCGAGCTGGGATGGTTCCTCGTGGAATGAAGGCGGTTGAGGAACTTCAAAAGAGAAAGGATGGGCCCATTTTGTTTTCTCCGGGCCAAGTCAAACGTTCAAAACAGGATGACGATGATTTCGATAAGGCGGGGTCTGCTGGACAGCCCCGCCAAGAAATATGA

Protein sequence

MAERLGNALGTFEDADNRNGFLFWGSSLRLKVRLDLNRPVRRGIRIFPDGPLSGLWVPIRYERLPELCSYCGLITHSSRGCAMFLQSENRARLFQQYGDWLRYTGRGMTLPPVLIQEDNSVHPPNVAQGQRISMDVVPTSASDPTVNELPRNRFNGIRICEPAVAPSQQSHRSTLQDSRRLKGKEKILEVQTKRKMAMEDFDSRWRPRSSNGSLPSSEIHSEKRLNFFNGQGINLQHLKGNTVSNGLLNGEEVGEGSNRRLSRNLVTDFQRSDPIPLGLRRDKAHLKEADPEIESDPEMLEEFGSDSDGLGKSSANQDGCGHAAVADQVQLQSQVGFMQGSMEDGPMEFVFGSSQYLQLDESEGVRNSMDPLVFKAKFPKLSPPKMQGIGWKKRARAGMVPRGMKAVEELQKRKDGPILFSPGQVKRSKQDDDDFDKAGSAGQPRQEI
Homology
BLAST of Lag0037920 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 126.3 bits (316), Expect = 6.5e-25
Identity = 56/107 (52.34%), Postives = 78/107 (72.90%), Query Frame = 0

Query: 1   MAERLGNALGTFEDAD-NRNGFLFWGSSLRLKVRLDLNRPVRRGIRIFPDGPLSGLWVPI 60
           MA RLGNA+G F D D N  GF  WG+SLR++V +D+ +P+RRGI+I  DGP+ G W+PI
Sbjct: 144 MAIRLGNAIGNFVDVDCNEKGF-SWGASLRIRVLIDITKPLRRGIKINIDGPMGGCWIPI 203

Query: 61  RYERLPELCSYCGLITHSSRGC-AMFLQSENRARLFQQYGDWLRYTG 106
           +YERLP+ C +CG+I HSS  C A +L +++ +R   +YG WLR+ G
Sbjct: 204 QYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSEYGPWLRFVG 249

BLAST of Lag0037920 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 107.1 bits (266), Expect = 4.1e-19
Identity = 47/105 (44.76%), Postives = 66/105 (62.86%), Query Frame = 0

Query: 1   MAERLGNALGTFEDADNRNGFLFWGSSLRLKVRLDLNRPVRRGIRIFPDGPLSGLWVPIR 60
           MA RLGNA+G FED ++      WGS LR++VR D+ +P+ RGI++  DGP+ G W+PI+
Sbjct: 145 MATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVMKPLHRGIKLNLDGPMGGCWIPIQ 204

Query: 61  YERLPELCSYCGLITHSSRGCAMFLQSENRARLFQQYGDWLRYTG 106
           YERLP+   +CG + H  + C+          L  QYG WLR+ G
Sbjct: 205 YERLPDFRYHCGRLDHILKDCSDCCVDSVSKNL--QYGPWLRFQG 247

BLAST of Lag0037920 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 107.1 bits (266), Expect = 4.1e-19
Identity = 72/231 (31.17%), Postives = 115/231 (49.78%), Query Frame = 0

Query: 1   MAERLGNALGTFEDADNRNGFLFWGSSLRLKVRLDLNRPVRRGIRIFPDGPLSGLWVPIR 60
           MA RLGNALG FE+AD  +    WGS+LR++V LD+++P+RRGI++  DGP+ G W+PI+
Sbjct: 145 MAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPLRRGIKLNLDGPIGGAWIPIQ 204

Query: 61  YERLPELCSYCGLITHSSRGCAMFLQSENRARLFQQYGDWLRYTGRGMTLPPVLIQEDNS 120
           YERLP+ C +CGL               + +R   QYG WLRY G      P + Q    
Sbjct: 205 YERLPDFCYHCGL---------------SSSRKKHQYGSWLRYQGTVKPTMPQMKQPQED 264

Query: 121 VHPPNVAQGQRISMDVVPTSASDPTVNELPRNRFNGIRICEPAVAPSQQSHRSTLQDSRR 180
           +   + +     S    P  A    V   P        I  P  +P  ++ +   + S+ 
Sbjct: 265 L--LDKSGNNSFSSSTSPVGAGSQGVQSAPATG----PIAIPMESPVTETPKKGAEPSQ- 324

Query: 181 LKGKEKILEVQTKRKMAMEDFDSRWRP-RSSNGSLPSSEIHSEKRLNFFNG 231
            +GK  +L  + ++++ +++  +   P +S   S+  S   S  R++   G
Sbjct: 325 -QGKSPVLIDEGEQRINVKEISNLNPPLKSGAPSMQPSYSDSLTRMDLSPG 352

BLAST of Lag0037920 vs. NCBI nr
Match: XP_027060738.1 (uncharacterized protein LOC113687293 [Coffea arabica])

HSP 1 Score: 93.2 bits (230), Expect = 6.1e-15
Identity = 54/167 (32.34%), Postives = 83/167 (49.70%), Query Frame = 0

Query: 2   AERLGNALGTFEDADNRNGFLFWGSSLRLKVRLDLNRPVRRGIRIFPDGPLSGLWVPIRY 61
           AE LGN LG +E  + R     WG  LR++V++ L  P++R + +F +G +    V  +Y
Sbjct: 143 AEYLGNKLGVYEGFEQRGDLFAWGKFLRIRVKIHLESPLKRVMHLFIEGKVHK--VLFQY 202

Query: 62  ERLPELCSYCGLITHSSRGCAMFLQSENRARLFQQYGDWLR------YTGRGMTLPPVLI 121
           ERLP LC YCG I H  R C + L +        QYG WLR      ++G+  + P V I
Sbjct: 203 ERLPILCFYCGRIGHGDRDCELKLDAATYDTGDPQYGGWLRAKTEKSFSGQQRSRPAVTI 262

Query: 122 QEDNSVHPPNVAQGQRISMDVVPT---------SASDPTVNELPRNR 154
            ++ +       +G+R +    P          + SDP  N+L R++
Sbjct: 263 SDNENRVRQGTDKGKRSTASSSPDCLEFSNSDHTQSDPLDNDLERHQ 307

BLAST of Lag0037920 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])

HSP 1 Score: 90.9 bits (224), Expect = 3.0e-14
Identity = 42/103 (40.78%), Postives = 64/103 (62.14%), Query Frame = 0

Query: 1   MAERLGNALGTFEDADNRNGFLFWGSSLRLKVRLDLNRPVRRGIRIFPDGPLSGLWVPIR 60
           + E +GNA+G F D D  +G + WG ++R++V LD+ +P+RRG+++        +WV  +
Sbjct: 142 VGEIVGNAVGQFIDMDYEDGGIVWGRTMRIRVALDVRKPLRRGMKLALSS-AEPIWVDFK 201

Query: 61  YERLPELCSYCGLITHSSRGCAMFLQSENRARLFQ-QYGDWLR 103
           YERLP  C +CG + HS R C   L S + +R+   QYG WLR
Sbjct: 202 YERLPIYCYFCGRLGHSERECDDKLSSADGSRVDSLQYGAWLR 243

BLAST of Lag0037920 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.2e-25
Identity = 56/107 (52.34%), Postives = 78/107 (72.90%), Query Frame = 0

Query: 1   MAERLGNALGTFEDAD-NRNGFLFWGSSLRLKVRLDLNRPVRRGIRIFPDGPLSGLWVPI 60
           MA RLGNA+G F D D N  GF  WG+SLR++V +D+ +P+RRGI+I  DGP+ G W+PI
Sbjct: 144 MAIRLGNAIGNFVDVDCNEKGF-SWGASLRIRVLIDITKPLRRGIKINIDGPMGGCWIPI 203

Query: 61  RYERLPELCSYCGLITHSSRGC-AMFLQSENRARLFQQYGDWLRYTG 106
           +YERLP+ C +CG+I HSS  C A +L +++ +R   +YG WLR+ G
Sbjct: 204 QYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSEYGPWLRFVG 249

BLAST of Lag0037920 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.0e-19
Identity = 72/231 (31.17%), Postives = 115/231 (49.78%), Query Frame = 0

Query: 1   MAERLGNALGTFEDADNRNGFLFWGSSLRLKVRLDLNRPVRRGIRIFPDGPLSGLWVPIR 60
           MA RLGNALG FE+AD  +    WGS+LR++V LD+++P+RRGI++  DGP+ G W+PI+
Sbjct: 145 MAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPLRRGIKLNLDGPIGGAWIPIQ 204

Query: 61  YERLPELCSYCGLITHSSRGCAMFLQSENRARLFQQYGDWLRYTGRGMTLPPVLIQEDNS 120
           YERLP+ C +CGL               + +R   QYG WLRY G      P + Q    
Sbjct: 205 YERLPDFCYHCGL---------------SSSRKKHQYGSWLRYQGTVKPTMPQMKQPQED 264

Query: 121 VHPPNVAQGQRISMDVVPTSASDPTVNELPRNRFNGIRICEPAVAPSQQSHRSTLQDSRR 180
           +   + +     S    P  A    V   P        I  P  +P  ++ +   + S+ 
Sbjct: 265 L--LDKSGNNSFSSSTSPVGAGSQGVQSAPATG----PIAIPMESPVTETPKKGAEPSQ- 324

Query: 181 LKGKEKILEVQTKRKMAMEDFDSRWRP-RSSNGSLPSSEIHSEKRLNFFNG 231
            +GK  +L  + ++++ +++  +   P +S   S+  S   S  R++   G
Sbjct: 325 -QGKSPVLIDEGEQRINVKEISNLNPPLKSGAPSMQPSYSDSLTRMDLSPG 352

BLAST of Lag0037920 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.0e-19
Identity = 47/105 (44.76%), Postives = 66/105 (62.86%), Query Frame = 0

Query: 1   MAERLGNALGTFEDADNRNGFLFWGSSLRLKVRLDLNRPVRRGIRIFPDGPLSGLWVPIR 60
           MA RLGNA+G FED ++      WGS LR++VR D+ +P+ RGI++  DGP+ G W+PI+
Sbjct: 145 MATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVMKPLHRGIKLNLDGPMGGCWIPIQ 204

Query: 61  YERLPELCSYCGLITHSSRGCAMFLQSENRARLFQQYGDWLRYTG 106
           YERLP+   +CG + H  + C+          L  QYG WLR+ G
Sbjct: 205 YERLPDFRYHCGRLDHILKDCSDCCVDSVSKNL--QYGPWLRFQG 247

BLAST of Lag0037920 vs. ExPASy TrEMBL
Match: A0A6P6S3G2 (uncharacterized protein LOC113687293 OS=Coffea arabica OX=13443 GN=LOC113687293 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.0e-15
Identity = 54/167 (32.34%), Postives = 83/167 (49.70%), Query Frame = 0

Query: 2   AERLGNALGTFEDADNRNGFLFWGSSLRLKVRLDLNRPVRRGIRIFPDGPLSGLWVPIRY 61
           AE LGN LG +E  + R     WG  LR++V++ L  P++R + +F +G +    V  +Y
Sbjct: 143 AEYLGNKLGVYEGFEQRGDLFAWGKFLRIRVKIHLESPLKRVMHLFIEGKVHK--VLFQY 202

Query: 62  ERLPELCSYCGLITHSSRGCAMFLQSENRARLFQQYGDWLR------YTGRGMTLPPVLI 121
           ERLP LC YCG I H  R C + L +        QYG WLR      ++G+  + P V I
Sbjct: 203 ERLPILCFYCGRIGHGDRDCELKLDAATYDTGDPQYGGWLRAKTEKSFSGQQRSRPAVTI 262

Query: 122 QEDNSVHPPNVAQGQRISMDVVPT---------SASDPTVNELPRNR 154
            ++ +       +G+R +    P          + SDP  N+L R++
Sbjct: 263 SDNENRVRQGTDKGKRSTASSSPDCLEFSNSDHTQSDPLDNDLERHQ 307

BLAST of Lag0037920 vs. ExPASy TrEMBL
Match: A0A2N9H0Z5 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33191 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.3e-14
Identity = 44/101 (43.56%), Postives = 59/101 (58.42%), Query Frame = 0

Query: 3   ERLGNALGTFEDADNRNGFLFWGSSLRLKVRLDLNRPVRRGIRIFPDGPLSGLWVPIRYE 62
           +RLGNA+G     D   G + WG  LR+++ LD  +P+ RG R+        LWV  +YE
Sbjct: 114 QRLGNAMGKVVKVDVPEGGVAWGPYLRIRLCLDFTKPIPRG-RLVTFQSSGQLWVSFKYE 173

Query: 63  RLPELCSYCGLITHSSRGCAMFLQSE-NRARLFQQYGDWLR 103
           RLP LC +CGL+ HS R C   L+S    A + +QYG WLR
Sbjct: 174 RLPWLCFFCGLLGHSERDCVASLRSRCQGATISKQYGPWLR 213

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022156185.16.5e-2552.34uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
XP_022132681.14.1e-1944.76uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_022158377.14.1e-1931.17uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_027060738.16.1e-1532.34uncharacterized protein LOC113687293 [Coffea arabica][more]
XP_028122006.13.0e-1440.78uncharacterized protein LOC114319195 [Camellia sinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DU553.2e-2552.34uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DX302.0e-1931.17uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1BSZ12.0e-1944.76uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6P6S3G23.0e-1532.34uncharacterized protein LOC113687293 OS=Coffea arabica OX=13443 GN=LOC113687293 ... [more]
A0A2N9H0Z54.3e-1443.56CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3319... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 34..82
e-value: 3.7E-9
score: 36.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 405..448
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 426..440

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0037920.1Lag0037920.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding