Lag0037914 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0037914
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	E3 ubiquitin-protein ligase RMA3
Location	chr2: 10544530 .. 10545315 (+)
RNA-Seq Expression	Lag0037914
Synteny	Lag0037914

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACAACACTACTCTACATCTGAGGCATTCTTAGATTCTGATCAAGATGTCTCTCTCAAGCAAAACTGGAAATCAATCTCATCGCAGGCGACAGTCTCAGAAGATGCTAACGGTTGCTTCGATTGCAACATTTGCTTCGACTCGGCAGCTGACCCTGTTGTCACCCTCTGCGGTCACCTCTACTGCTGGCCGTGCATTTACAAATGGCTTCATGTACAAATCTCCAGCAACGAACCCGAAAACACGCAGAACTGCCCCGTTTGCAAGGCTAGCATTACTCCCTCCTCTTTGGTTCCCCTCTATGGCCGTGGCACGTCGAACTCGGATTCCGAATCCAAGAAGTCTCACTTGGGTATGGCTGTACCTCGAAGGCCACCACCATCGATGAACACACAGCCCCATTCCAATGCAGCCTCTGCATTGCATCCAAGCCAGGAACTTCATCCAAATTATATCCGCTCGCCCTCGCACCCTATCTATCACCAACAATACTTTCCCCAGGCCTATGGTGACTTTGCCTCGTACGCACCATCTTATCTCGGTAATGCCGTGATAACAAGTCTGCTAAACCCGACGATCGGGATGTTCGGAGAAACGGTTTTCACTAGAATTTTCGGTAGCGTGGATGGGAACTTGTTGACGTACCCAGCTTACAACAACAACTCGATTGCAGGGAATGCCAGTAGCAGAATGAGAAGACAGGAAATGCAGCTTGATAAGTCTCTGAACAGAGTTTCCATCTTCCTATTTTGCTGCTTTATAATCTGTCTTCTGTTGTTTTGA

mRNA sequence

ATGGAACAACACTACTCTACATCTGAGGCATTCTTAGATTCTGATCAAGATGTCTCTCTCAAGCAAAACTGGAAATCAATCTCATCGCAGGCGACAGTCTCAGAAGATGCTAACGGTTGCTTCGATTGCAACATTTGCTTCGACTCGGCAGCTGACCCTGTTGTCACCCTCTGCGGTCACCTCTACTGCTGGCCGTGCATTTACAAATGGCTTCATGTACAAATCTCCAGCAACGAACCCGAAAACACGCAGAACTGCCCCGTTTGCAAGGCTAGCATTACTCCCTCCTCTTTGGTTCCCCTCTATGGCCGTGGCACGTCGAACTCGGATTCCGAATCCAAGAAGTCTCACTTGGGTATGGCTGTACCTCGAAGGCCACCACCATCGATGAACACACAGCCCCATTCCAATGCAGCCTCTGCATTGCATCCAAGCCAGGAACTTCATCCAAATTATATCCGCTCGCCCTCGCACCCTATCTATCACCAACAATACTTTCCCCAGGCCTATGGTGACTTTGCCTCGTACGCACCATCTTATCTCGGTAATGCCGTGATAACAAGTCTGCTAAACCCGACGATCGGGATGTTCGGAGAAACGGTTTTCACTAGAATTTTCGGTAGCGTGGATGGGAACTTGTTGACGTACCCAGCTTACAACAACAACTCGATTGCAGGGAATGCCAGTAGCAGAATGAGAAGACAGGAAATGCAGCTTGATAAGTCTCTGAACAGAGTTTCCATCTTCCTATTTTGCTGCTTTATAATCTGTCTTCTGTTGTTTTGA

Coding sequence (CDS)

ATGGAACAACACTACTCTACATCTGAGGCATTCTTAGATTCTGATCAAGATGTCTCTCTCAAGCAAAACTGGAAATCAATCTCATCGCAGGCGACAGTCTCAGAAGATGCTAACGGTTGCTTCGATTGCAACATTTGCTTCGACTCGGCAGCTGACCCTGTTGTCACCCTCTGCGGTCACCTCTACTGCTGGCCGTGCATTTACAAATGGCTTCATGTACAAATCTCCAGCAACGAACCCGAAAACACGCAGAACTGCCCCGTTTGCAAGGCTAGCATTACTCCCTCCTCTTTGGTTCCCCTCTATGGCCGTGGCACGTCGAACTCGGATTCCGAATCCAAGAAGTCTCACTTGGGTATGGCTGTACCTCGAAGGCCACCACCATCGATGAACACACAGCCCCATTCCAATGCAGCCTCTGCATTGCATCCAAGCCAGGAACTTCATCCAAATTATATCCGCTCGCCCTCGCACCCTATCTATCACCAACAATACTTTCCCCAGGCCTATGGTGACTTTGCCTCGTACGCACCATCTTATCTCGGTAATGCCGTGATAACAAGTCTGCTAAACCCGACGATCGGGATGTTCGGAGAAACGGTTTTCACTAGAATTTTCGGTAGCGTGGATGGGAACTTGTTGACGTACCCAGCTTACAACAACAACTCGATTGCAGGGAATGCCAGTAGCAGAATGAGAAGACAGGAAATGCAGCTTGATAAGTCTCTGAACAGAGTTTCCATCTTCCTATTTTGCTGCTTTATAATCTGTCTTCTGTTGTTTTGA

Protein sequence

MEQHYSTSEAFLDSDQDVSLKQNWKSISSQATVSEDANGCFDCNICFDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMAVPRRPPPSMNTQPHSNAASALHPSQELHPNYIRSPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLTYPAYNNNSIAGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

Homology

[Close]

BLAST of Lag0037914 vs. NCBI nr
Match: XP_038899693.1 (E3 ubiquitin-protein ligase RMA3 [Benincasa hispida])

HSP 1 Score: 489.2 bits (1258), Expect = 2.2e-134
Identity = 241/265 (90.94%), Postives = 251/265 (94.72%), Query Frame = 0


Query: 1   MEQHY----STSEAFLDSDQDVSLKQNWKSISSQATVSEDANGCFDCNICFDSAADPVVT 60
           MEQ+Y    S SEA+L+S+QDVSLKQNWKSIS+Q+TVSEDANGCFDCNIC DSAA+PVVT
Sbjct: 1   MEQNYSVPHSVSEAYLESEQDVSLKQNWKSISTQSTVSEDANGCFDCNICLDSAAEPVVT 60

Query: 61  LCGHLYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKS 120
           LCGHLYCWPCIYKWLHVQISSN PENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKS
Sbjct: 61  LCGHLYCWPCIYKWLHVQISSNRPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKS 120

Query: 121 HLGMAVPRRPPPSMNTQPHSNAASALHPSQELHPNYIRSPSHPIYHQQYFPQAYGDFASY 180
           HLGM VPRRPPPSMNT PHSNA SALHPSQELHPNY+RSPSHPIYHQQYFPQAYGDFASY
Sbjct: 121 HLGMVVPRRPPPSMNTPPHSNATSALHPSQELHPNYVRSPSHPIYHQQYFPQAYGDFASY 180

Query: 181 APSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLTYPAYNNNSIAGNASSRMRRQE 240
           APSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLL YP Y NN+I GNAS+RMRRQE
Sbjct: 181 APSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPY-NNAIPGNASTRMRRQE 240

Query: 241 MQLDKSLNRVSIFLFCCFIICLLLF 262
           MQLDKSLNRVSIFLFCCFIICLLLF
Sbjct: 241 MQLDKSLNRVSIFLFCCFIICLLLF 264

[Close]

BLAST of Lag0037914 vs. NCBI nr
Match: XP_008452467.1 (PREDICTED: E3 ubiquitin-protein ligase RMA3 [Cucumis melo] >KAA0064336.1 E3 ubiquitin-protein ligase RMA3 [Cucumis melo var. makuwa] >TYK20251.1 E3 ubiquitin-protein ligase RMA3 [Cucumis melo var. makuwa])

HSP 1 Score: 484.6 bits (1246), Expect = 5.5e-133
Identity = 237/261 (90.80%), Postives = 251/261 (96.17%), Query Frame = 0


Query: 1   MEQHYSTSEAFLDSDQDVSLKQNWKSISSQATVSEDANGCFDCNICFDSAADPVVTLCGH 60
           MEQ+YS  EA+L+S+QDVSLKQNWKSIS+++T+SEDANGCFDCNIC DSAADPVVTLCGH
Sbjct: 1   MEQNYSVPEAYLESEQDVSLKQNWKSISTESTISEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120
           LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM
Sbjct: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120

Query: 121 AVPRRPPPSMNTQPHSNAASALHPSQELHPNYIRSPSHPIYHQQYFPQAYGDFASYAPSY 180
           AVPRRPPPSMNT P SN++SA +PSQELH NYIRSPSHPIYHQQYFPQAYG+FASYAPSY
Sbjct: 121 AVPRRPPPSMNTPPPSNSSSASYPSQELHSNYIRSPSHPIYHQQYFPQAYGNFASYAPSY 180

Query: 181 LGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLTYPAYNNNSIAGNASSRMRRQEMQLD 240
           LGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLL YP Y NNSI+GNAS+RMRRQEMQLD
Sbjct: 181 LGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPY-NNSISGNASTRMRRQEMQLD 240

Query: 241 KSLNRVSIFLFCCFIICLLLF 262
           KSLNRVSIFLFCCFIICLLLF
Sbjct: 241 KSLNRVSIFLFCCFIICLLLF 260

[Close]

BLAST of Lag0037914 vs. NCBI nr
Match: XP_004141226.1 (E3 ubiquitin-protein ligase RMA3 [Cucumis sativus] >KGN55135.1 hypothetical protein Csa_012256 [Cucumis sativus])

HSP 1 Score: 478.4 bits (1230), Expect = 3.9e-131
Identity = 236/262 (90.08%), Postives = 250/262 (95.42%), Query Frame = 0


Query: 1   MEQHYSTSEAFLDSDQDVSLKQNWKSISSQATVSEDANGCFDCNICFDSAADPVVTLCGH 60
           MEQ+YS  EA+L+S+QDVSLKQNWKSIS+Q+T+SEDANGCFDCNIC DSAADPVVTLCGH
Sbjct: 1   MEQNYSVPEAYLESEQDVSLKQNWKSISTQSTISEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120
           LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM
Sbjct: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120

Query: 121 AVPRRPPPSMNTQPHSNAASALHPSQELHPNYIRSPSHPIYHQQYFPQA-YGDFASYAPS 180
           AVPRRPPPSMNT  HSN++S L+PSQELH NYIRSPSHPIYHQQYFPQA YG+FASY+PS
Sbjct: 121 AVPRRPPPSMNTPSHSNSSSTLYPSQELHSNYIRSPSHPIYHQQYFPQATYGNFASYSPS 180

Query: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLTYPAYNNNSIAGNASSRMRRQEMQL 240
           YLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLL Y  Y NNSI+GNAS+RMRRQEMQL
Sbjct: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYSPY-NNSISGNASTRMRRQEMQL 240

Query: 241 DKSLNRVSIFLFCCFIICLLLF 262
           DKSLNRVSIFLFCCFIICLLLF
Sbjct: 241 DKSLNRVSIFLFCCFIICLLLF 261

[Close]

BLAST of Lag0037914 vs. NCBI nr
Match: XP_022139659.1 (E3 ubiquitin-protein ligase RMA3-like [Momordica charantia])

HSP 1 Score: 459.5 bits (1181), Expect = 1.9e-125
Identity = 228/262 (87.02%), Postives = 241/262 (91.98%), Query Frame = 0


Query: 1   MEQHYSTSEAFLDSDQDVSLKQNWKSISSQATVSEDANGCFDCNICFDSAADPVVTLCGH 60
           MEQ Y+T EA+ +S+QDVSLKQNWKSISSQ TVS+DA+GCFDCNIC DSAA+PVVTLCGH
Sbjct: 1   MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGH 60

Query: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120
           LYCWPCIYKWL+VQISSNEPEN QNCPVCKASITPSSLVPLYGRG SN+DSESKKSHLG+
Sbjct: 61  LYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGV 120

Query: 121 AVPRRPPPS-MNTQPHSNAASALHPSQELHPNYIRSPSHPIYHQQYFPQAYGDFASYAPS 180
           AVPRRPPPS  NT  +SNA SALHPSQ+LHPNY RSPSHPIYHQQYFPQAYGD A+Y PS
Sbjct: 121 AVPRRPPPSATNTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPS 180

Query: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLTYPAYNNNSIAGNASSRMRRQEMQL 240
           YLGNAVITSLLNPTIGMFGETVFTRIFGSVD NLL YP Y NNSI GN SSRMRRQEMQL
Sbjct: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPY-NNSIPGNGSSRMRRQEMQL 240

Query: 241 DKSLNRVSIFLFCCFIICLLLF 262
           DKSLNRVSIFLFCCFIICLLLF
Sbjct: 241 DKSLNRVSIFLFCCFIICLLLF 261

[Close]

BLAST of Lag0037914 vs. NCBI nr
Match: XP_023521850.1 (E3 ubiquitin-protein ligase RMA3-like [Cucurbita pepo subsp. pepo] >XP_023521858.1 E3 ubiquitin-protein ligase RMA3-like [Cucurbita pepo subsp. pepo] >KAG6607875.1 E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037404.1 E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 459.5 bits (1181), Expect = 1.9e-125
Identity = 222/261 (85.06%), Postives = 241/261 (92.34%), Query Frame = 0


Query: 1   MEQHYSTSEAFLDSDQDVSLKQNWKSISSQATVSEDANGCFDCNICFDSAADPVVTLCGH 60
           M+Q YS+ EA+L+S+QDVSLKQNWKS+S+Q+TVSEDANGCFDCNIC DSAADPVVTLCGH
Sbjct: 1   MDQTYSSPEAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120
           L+CWPCIYKW HVQISSNE ENT NCPVCKASITPSSLVPLYGRG S SDSESKKSHLG+
Sbjct: 61  LFCWPCIYKWFHVQISSNETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGI 120

Query: 121 AVPRRPPPSMNTQPHSNAASALHPSQELHPNYIRSPSHPIYHQQYFPQAYGDFASYAPSY 180
            VPRRPPPSMNT PHSNAASALHPS+ELHPNYIRSP H IYHQQYFPQAYG+FA YAPSY
Sbjct: 121 TVPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY 180

Query: 181 LGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLTYPAYNNNSIAGNASSRMRRQEMQLD 240
           LGNA++TSLLNPTIG+ GETV+TRIFGS DGNLL YP Y N+S+AGN  +RMRRQEMQLD
Sbjct: 181 LGNAMVTSLLNPTIGLIGETVYTRIFGSADGNLLPYPPY-NHSVAGNVGTRMRRQEMQLD 240

Query: 241 KSLNRVSIFLFCCFIICLLLF 262
           KSLNRVSIFLFCCFIICLLLF
Sbjct: 241 KSLNRVSIFLFCCFIICLLLF 260

[Close]

BLAST of Lag0037914 vs. ExPASy Swiss-Prot
Match: Q8GUK7 (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 7.4e-48
Identity = 120/258 (46.51%), Postives = 154/258 (59.69%), Query Frame = 0


Query: 8   SEAFLDSDQDVSLKQNWKSISSQATVSEDANGCFDCNICFDSAADPVVTLCGHLYCWPCI 67
           S+A    D     KQ     ++      + +GCFDCNIC D+A DPVVTLCGHL+CWPCI
Sbjct: 9   SDAQRAHDNGFIAKQKPNLTTAPTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCI 68

Query: 68  YKWLHVQISS-NEPENTQNCPVCKASITPSSLVPLYGRGTSNSDS---ESKKSHLGMAVP 127
           YKWLHVQ+SS +  ++  NCPVCK++IT +SLVPLYGRG S+  S     K+  L   +P
Sbjct: 69  YKWLHVQLSSVSVDQHQNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIP 128

Query: 128 RRPPPSMNTQPHSNAASALHPSQELHPNYIRSPSHPIYHQQYFPQAYGDFASYAPSYLGN 187
           RRP PS    P   +AS+L+PS +   +   SPS   ++ QY P+    F +   + L N
Sbjct: 129 RRPAPSALRNP-ITSASSLNPSLQ---HQTLSPS--FHNHQYSPRG---FTTTESTDLAN 188

Query: 188 AVITSLLNPTIGMFGETVFTRIFGSVDGNLLTYPAYNNNSIAGNASSRMRRQEMQLDKSL 247
           AV+ S L P IGMFG+ V+TRIFG+          + N       S RM    MQ +KSL
Sbjct: 189 AVMMSFLYPVIGMFGDLVYTRIFGT----------FTNTIAQPYQSQRM----MQREKSL 243

Query: 248 NRVSIFLFCCFIICLLLF 262
           NRVSIF  CC I+CLLLF
Sbjct: 249 NRVSIFFLCCIILCLLLF 243

[Close]

BLAST of Lag0037914 vs. ExPASy Swiss-Prot
Match: Q6R567 (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 9.3e-43
Identity = 102/249 (40.96%), Postives = 144/249 (57.83%), Query Frame = 0


Query: 24  WKSISSQATVSEDANGCFDCNICFDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPENT 83
           WKS++ +  V E+ +G FDCNIC D   +PV+TLCGHLYCWPCIYKW++ Q  S+E  + 
Sbjct: 24  WKSMNDE--VEENISGGFDCNICLDCVHEPVITLCGHLYCWPCIYKWIYFQSVSSENSDQ 83

Query: 84  Q--NCPVCKASITPSSLVPLYGR-GTSNSDSESKKSHLGMAVPRRPPPSMNTQPHSNAAS 143
           Q   CPVCKA ++  +L+PLYGR G S   SE K  +LG+ +P+RPP            S
Sbjct: 84  QQPQCPVCKAEVSEKTLIPLYGRGGQSTKPSEGKAPNLGIVIPQRPP------------S 143

Query: 144 ALHPSQELHPNYIRSPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNP-------- 203
                  L P    +PS  +  + Y  Q+     +  P+Y G+ + + +L+P        
Sbjct: 144 PRCGGHFLLPTTDSNPSQLLQRRGYQQQS----QTRQPAYQGSYMSSPMLSPGGATANML 203

Query: 204 TIGMFGETVFTRIFGSVDGNLLTYPAYNNNSIAGNASSRMRRQEMQLDKSLNRVSIFLFC 262
              M GE  + RIFG+    + TYP  N+ ++A ++S RMRRQ  Q D+SL R+  FLFC
Sbjct: 204 QHSMIGEVAYARIFGNSSTTMYTYP--NSYNLAISSSPRMRRQLSQADRSLGRICFFLFC 252

[Close]

BLAST of Lag0037914 vs. ExPASy Swiss-Prot
Match: O64425 (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.8e-38
Identity = 104/241 (43.15%), Postives = 146/241 (60.58%), Query Frame = 0


Query: 26  SISSQATVSEDANGCFDCNICFDSAADPVVTLCGHLYCWPCIYKWLHVQ--ISSNEPENT 85
           ++S  +  ++D+N  FDCNIC DS  +PVVTLCGHL+CWPCI+KWL VQ   +S+E +  
Sbjct: 33  TVSVPSDDTDDSN--FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRH 92

Query: 86  QNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMAVPRRP--PPSMNTQPHSNAASA 145
           + CPVCK+ ++ S+LVPLYGRG   +  E K S     VP+RP  P      P+S  AS 
Sbjct: 93  RQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS-----VPKRPVGPVYRLEMPNSPYAST 152

Query: 146 -LHPSQELHPNYIRSPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGET 205
            L  SQ +H N   SP      + Y+P + G  +S + SY      +++L+P + M GE 
Sbjct: 153 DLRLSQRVHFN---SP-----QEGYYPVS-GVMSSNSLSY------SAVLDPVMVMVGEM 212

Query: 206 VFTRIFGSVDGNLLTYPAYNNNSIAGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLL 262
           V TR+FG+   +   YP  +  ++AG +  RMRR+ MQ DKSL R+  F  CC ++CLLL
Sbjct: 213 VATRLFGTRVMDRFAYP--DTYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLL 249

[Close]

BLAST of Lag0037914 vs. ExPASy Swiss-Prot
Match: P93030 (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.7e-26
Identity = 78/237 (32.91%), Postives = 107/237 (45.15%), Query Frame = 0


Query: 32  TVSEDANGCFDCNICFDSAADPVVTLCGHLYCWPCIYKWLHVQISSNE-------PENTQ 91
           T   D+ G FDCNIC D   DPVVTLCGHL+CWPCI+KW +   +S +            
Sbjct: 10  TTLVDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPP 69

Query: 92  NCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMAVPRRPPPSMNTQPHSNAASALHP 151
            CPVCK+ ++ ++LVP+YGRG        K    G  VP R                   
Sbjct: 70  KCPVCKSDVSEATLVPIYGRG-------QKAPQSGSNVPSR------------------- 129

Query: 152 SQELHPNYIRSPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTR 211
                      P+ P+Y  +   Q  G+  S    Y        + +P +G+  E V+ R
Sbjct: 130 -----------PTGPVYDLRGVGQRLGEGESQRYMY-------RMPDPVMGVVCEMVYRR 189

Query: 212 IFGSVDGNLLTYPAYNNNSIAGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF 262
           +FG    N+  Y   N          R RR+ MQ ++SL+RV +FL C   +CL LF
Sbjct: 190 LFGESSSNMAPYRDMN---------VRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of Lag0037914 vs. ExPASy Swiss-Prot
Match: Q09463 (E3 ubiquitin ligase rnf-5 OS=Caenorhabditis elegans OX=6239 GN=rnf-5 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.7e-18
Identity = 46/106 (43.40%), Postives = 63/106 (59.43%), Query Frame = 0


Query: 25  KSISSQATVS--EDANGCFDCNICFDSAADPVVTLCGHLYCWPCIYKWLHVQISSNEPEN 84
           K+ S + T S  +D +  F+CNIC D+A D VV+LCGHL+CWPC+ +WL  +       N
Sbjct: 6   KAPSEEPTSSSNKDESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTR------PN 65

Query: 85  TQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMAVPRRPPP 129
            Q CPVCK++I  + +VP+YGRG  +SD   K           PPP
Sbjct: 66  NQVCPVCKSAIDGNKVVPIYGRGGDSSDPRKKVPPRPKGQRSEPPP 105

[Close]

BLAST of Lag0037914 vs. ExPASy TrEMBL
Match: A0A5A7VD79 (E3 ubiquitin-protein ligase RMA3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003900 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 2.7e-133
Identity = 237/261 (90.80%), Postives = 251/261 (96.17%), Query Frame = 0


Query: 1   MEQHYSTSEAFLDSDQDVSLKQNWKSISSQATVSEDANGCFDCNICFDSAADPVVTLCGH 60
           MEQ+YS  EA+L+S+QDVSLKQNWKSIS+++T+SEDANGCFDCNIC DSAADPVVTLCGH
Sbjct: 1   MEQNYSVPEAYLESEQDVSLKQNWKSISTESTISEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120
           LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM
Sbjct: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120

Query: 121 AVPRRPPPSMNTQPHSNAASALHPSQELHPNYIRSPSHPIYHQQYFPQAYGDFASYAPSY 180
           AVPRRPPPSMNT P SN++SA +PSQELH NYIRSPSHPIYHQQYFPQAYG+FASYAPSY
Sbjct: 121 AVPRRPPPSMNTPPPSNSSSASYPSQELHSNYIRSPSHPIYHQQYFPQAYGNFASYAPSY 180

Query: 181 LGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLTYPAYNNNSIAGNASSRMRRQEMQLD 240
           LGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLL YP Y NNSI+GNAS+RMRRQEMQLD
Sbjct: 181 LGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPY-NNSISGNASTRMRRQEMQLD 240

Query: 241 KSLNRVSIFLFCCFIICLLLF 262
           KSLNRVSIFLFCCFIICLLLF
Sbjct: 241 KSLNRVSIFLFCCFIICLLLF 260

[Close]

BLAST of Lag0037914 vs. ExPASy TrEMBL
Match: A0A1S3BTX0 (E3 ubiquitin-protein ligase RMA3 OS=Cucumis melo OX=3656 GN=LOC103493490 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 2.7e-133
Identity = 237/261 (90.80%), Postives = 251/261 (96.17%), Query Frame = 0


Query: 1   MEQHYSTSEAFLDSDQDVSLKQNWKSISSQATVSEDANGCFDCNICFDSAADPVVTLCGH 60
           MEQ+YS  EA+L+S+QDVSLKQNWKSIS+++T+SEDANGCFDCNIC DSAADPVVTLCGH
Sbjct: 1   MEQNYSVPEAYLESEQDVSLKQNWKSISTESTISEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120
           LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM
Sbjct: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120

Query: 121 AVPRRPPPSMNTQPHSNAASALHPSQELHPNYIRSPSHPIYHQQYFPQAYGDFASYAPSY 180
           AVPRRPPPSMNT P SN++SA +PSQELH NYIRSPSHPIYHQQYFPQAYG+FASYAPSY
Sbjct: 121 AVPRRPPPSMNTPPPSNSSSASYPSQELHSNYIRSPSHPIYHQQYFPQAYGNFASYAPSY 180

Query: 181 LGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLTYPAYNNNSIAGNASSRMRRQEMQLD 240
           LGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLL YP Y NNSI+GNAS+RMRRQEMQLD
Sbjct: 181 LGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPY-NNSISGNASTRMRRQEMQLD 240

Query: 241 KSLNRVSIFLFCCFIICLLLF 262
           KSLNRVSIFLFCCFIICLLLF
Sbjct: 241 KSLNRVSIFLFCCFIICLLLF 260

[Close]

BLAST of Lag0037914 vs. ExPASy TrEMBL
Match: A0A0A0KZN0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G637750 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 1.9e-131
Identity = 236/262 (90.08%), Postives = 250/262 (95.42%), Query Frame = 0


Query: 1   MEQHYSTSEAFLDSDQDVSLKQNWKSISSQATVSEDANGCFDCNICFDSAADPVVTLCGH 60
           MEQ+YS  EA+L+S+QDVSLKQNWKSIS+Q+T+SEDANGCFDCNIC DSAADPVVTLCGH
Sbjct: 1   MEQNYSVPEAYLESEQDVSLKQNWKSISTQSTISEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120
           LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM
Sbjct: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120

Query: 121 AVPRRPPPSMNTQPHSNAASALHPSQELHPNYIRSPSHPIYHQQYFPQA-YGDFASYAPS 180
           AVPRRPPPSMNT  HSN++S L+PSQELH NYIRSPSHPIYHQQYFPQA YG+FASY+PS
Sbjct: 121 AVPRRPPPSMNTPSHSNSSSTLYPSQELHSNYIRSPSHPIYHQQYFPQATYGNFASYSPS 180

Query: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLTYPAYNNNSIAGNASSRMRRQEMQL 240
           YLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLL Y  Y NNSI+GNAS+RMRRQEMQL
Sbjct: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYSPY-NNSISGNASTRMRRQEMQL 240

Query: 241 DKSLNRVSIFLFCCFIICLLLF 262
           DKSLNRVSIFLFCCFIICLLLF
Sbjct: 241 DKSLNRVSIFLFCCFIICLLLF 261

[Close]

BLAST of Lag0037914 vs. ExPASy TrEMBL
Match: A0A6J1CDN1 (E3 ubiquitin-protein ligase RMA3-like OS=Momordica charantia OX=3673 GN=LOC111010508 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 9.1e-126
Identity = 228/262 (87.02%), Postives = 241/262 (91.98%), Query Frame = 0


Query: 1   MEQHYSTSEAFLDSDQDVSLKQNWKSISSQATVSEDANGCFDCNICFDSAADPVVTLCGH 60
           MEQ Y+T EA+ +S+QDVSLKQNWKSISSQ TVS+DA+GCFDCNIC DSAA+PVVTLCGH
Sbjct: 1   MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGH 60

Query: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120
           LYCWPCIYKWL+VQISSNEPEN QNCPVCKASITPSSLVPLYGRG SN+DSESKKSHLG+
Sbjct: 61  LYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGV 120

Query: 121 AVPRRPPPS-MNTQPHSNAASALHPSQELHPNYIRSPSHPIYHQQYFPQAYGDFASYAPS 180
           AVPRRPPPS  NT  +SNA SALHPSQ+LHPNY RSPSHPIYHQQYFPQAYGD A+Y PS
Sbjct: 121 AVPRRPPPSATNTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPS 180

Query: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLTYPAYNNNSIAGNASSRMRRQEMQL 240
           YLGNAVITSLLNPTIGMFGETVFTRIFGSVD NLL YP Y NNSI GN SSRMRRQEMQL
Sbjct: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPY-NNSIPGNGSSRMRRQEMQL 240

Query: 241 DKSLNRVSIFLFCCFIICLLLF 262
           DKSLNRVSIFLFCCFIICLLLF
Sbjct: 241 DKSLNRVSIFLFCCFIICLLLF 261

[Close]

BLAST of Lag0037914 vs. ExPASy TrEMBL
Match: A0A6J1J1I0 (E3 ubiquitin-protein ligase RMA3-like OS=Cucurbita maxima OX=3661 GN=LOC111480472 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 3.5e-125
Identity = 221/261 (84.67%), Postives = 240/261 (91.95%), Query Frame = 0


Query: 1   MEQHYSTSEAFLDSDQDVSLKQNWKSISSQATVSEDANGCFDCNICFDSAADPVVTLCGH 60
           M+Q YS SEA+L+S+ DVSLKQNWKS+S+Q+TVSEDANGCFDCNIC DSAADPVVTLCGH
Sbjct: 1   MDQTYSASEAYLESEHDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120
           L+CWPCIYKW HVQISSNE ENT NCPVCKASIT SSLVPLYGRG SNSDSESKKSHLG+
Sbjct: 61  LFCWPCIYKWFHVQISSNETENTHNCPVCKASITLSSLVPLYGRGMSNSDSESKKSHLGI 120

Query: 121 AVPRRPPPSMNTQPHSNAASALHPSQELHPNYIRSPSHPIYHQQYFPQAYGDFASYAPSY 180
            +PRRPPPSMNT PHSNAASALHPS+ELHPNYIRSP H IYHQQYFPQAYG+FA YAPSY
Sbjct: 121 TIPRRPPPSMNTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPSY 180

Query: 181 LGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLTYPAYNNNSIAGNASSRMRRQEMQLD 240
           LGNA++TSLLNPTIG+ GETV+TRIFGS DGNLL YP Y N+S+AGN  +RMRRQEMQLD
Sbjct: 181 LGNAMVTSLLNPTIGLIGETVYTRIFGSADGNLLPYPPY-NHSVAGNIGTRMRRQEMQLD 240

Query: 241 KSLNRVSIFLFCCFIICLLLF 262
           KSLNRVSIFLFCCFIICLLLF
Sbjct: 241 KSLNRVSIFLFCCFIICLLLF 260

[Close]

BLAST of Lag0037914 vs. TAIR 10
Match: AT4G27470.1 (RING membrane-anchor 3 )

HSP 1 Score: 192.2 bits (487), Expect = 5.2e-49
Identity = 120/258 (46.51%), Postives = 154/258 (59.69%), Query Frame = 0


Query: 8   SEAFLDSDQDVSLKQNWKSISSQATVSEDANGCFDCNICFDSAADPVVTLCGHLYCWPCI 67
           S+A    D     KQ     ++      + +GCFDCNIC D+A DPVVTLCGHL+CWPCI
Sbjct: 9   SDAQRAHDNGFIAKQKPNLTTAPTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCI 68

Query: 68  YKWLHVQISS-NEPENTQNCPVCKASITPSSLVPLYGRGTSNSDS---ESKKSHLGMAVP 127
           YKWLHVQ+SS +  ++  NCPVCK++IT +SLVPLYGRG S+  S     K+  L   +P
Sbjct: 69  YKWLHVQLSSVSVDQHQNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIP 128

Query: 128 RRPPPSMNTQPHSNAASALHPSQELHPNYIRSPSHPIYHQQYFPQAYGDFASYAPSYLGN 187
           RRP PS    P   +AS+L+PS +   +   SPS   ++ QY P+    F +   + L N
Sbjct: 129 RRPAPSALRNP-ITSASSLNPSLQ---HQTLSPS--FHNHQYSPRG---FTTTESTDLAN 188

Query: 188 AVITSLLNPTIGMFGETVFTRIFGSVDGNLLTYPAYNNNSIAGNASSRMRRQEMQLDKSL 247
           AV+ S L P IGMFG+ V+TRIFG+          + N       S RM    MQ +KSL
Sbjct: 189 AVMMSFLYPVIGMFGDLVYTRIFGT----------FTNTIAQPYQSQRM----MQREKSL 243

Query: 248 NRVSIFLFCCFIICLLLF 262
           NRVSIF  CC I+CLLLF
Sbjct: 249 NRVSIFFLCCIILCLLLF 243

[Close]

BLAST of Lag0037914 vs. TAIR 10
Match: AT4G03510.1 (RING membrane-anchor 1 )

HSP 1 Score: 161.0 bits (406), Expect = 1.3e-39
Identity = 104/241 (43.15%), Postives = 146/241 (60.58%), Query Frame = 0


Query: 26  SISSQATVSEDANGCFDCNICFDSAADPVVTLCGHLYCWPCIYKWLHVQ--ISSNEPENT 85
           ++S  +  ++D+N  FDCNIC DS  +PVVTLCGHL+CWPCI+KWL VQ   +S+E +  
Sbjct: 33  TVSVPSDDTDDSN--FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRH 92

Query: 86  QNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMAVPRRP--PPSMNTQPHSNAASA 145
           + CPVCK+ ++ S+LVPLYGRG   +  E K S     VP+RP  P      P+S  AS 
Sbjct: 93  RQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS-----VPKRPVGPVYRLEMPNSPYAST 152

Query: 146 -LHPSQELHPNYIRSPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGET 205
            L  SQ +H N   SP      + Y+P + G  +S + SY      +++L+P + M GE 
Sbjct: 153 DLRLSQRVHFN---SP-----QEGYYPVS-GVMSSNSLSY------SAVLDPVMVMVGEM 212

Query: 206 VFTRIFGSVDGNLLTYPAYNNNSIAGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLL 262
           V TR+FG+   +   YP  +  ++AG +  RMRR+ MQ DKSL R+  F  CC ++CLLL
Sbjct: 213 VATRLFGTRVMDRFAYP--DTYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLL 249

[Close]

BLAST of Lag0037914 vs. TAIR 10
Match: AT4G03510.2 (RING membrane-anchor 1 )

HSP 1 Score: 161.0 bits (406), Expect = 1.3e-39
Identity = 104/241 (43.15%), Postives = 146/241 (60.58%), Query Frame = 0


Query: 26  SISSQATVSEDANGCFDCNICFDSAADPVVTLCGHLYCWPCIYKWLHVQ--ISSNEPENT 85
           ++S  +  ++D+N  FDCNIC DS  +PVVTLCGHL+CWPCI+KWL VQ   +S+E +  
Sbjct: 33  TVSVPSDDTDDSN--FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRH 92

Query: 86  QNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMAVPRRP--PPSMNTQPHSNAASA 145
           + CPVCK+ ++ S+LVPLYGRG   +  E K S     VP+RP  P      P+S  AS 
Sbjct: 93  RQCPVCKSKVSHSTLVPLYGRGRCTTQEEGKNS-----VPKRPVGPVYRLEMPNSPYAST 152

Query: 146 -LHPSQELHPNYIRSPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGET 205
            L  SQ +H N   SP      + Y+P + G  +S + SY      +++L+P + M GE 
Sbjct: 153 DLRLSQRVHFN---SP-----QEGYYPVS-GVMSSNSLSY------SAVLDPVMVMVGEM 212

Query: 206 VFTRIFGSVDGNLLTYPAYNNNSIAGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLL 262
           V TR+FG+   +   YP  +  ++AG +  RMRR+ MQ DKSL R+  F  CC ++CLLL
Sbjct: 213 VATRLFGTRVMDRFAYP--DTYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLL 249

[Close]

BLAST of Lag0037914 vs. TAIR 10
Match: AT4G28270.1 (RING membrane-anchor 2 )

HSP 1 Score: 120.6 bits (301), Expect = 1.9e-27
Identity = 78/237 (32.91%), Postives = 107/237 (45.15%), Query Frame = 0


Query: 32  TVSEDANGCFDCNICFDSAADPVVTLCGHLYCWPCIYKWLHVQISSNE-------PENTQ 91
           T   D+ G FDCNIC D   DPVVTLCGHL+CWPCI+KW +   +S +            
Sbjct: 10  TTLVDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPP 69

Query: 92  NCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMAVPRRPPPSMNTQPHSNAASALHP 151
            CPVCK+ ++ ++LVP+YGRG        K    G  VP R                   
Sbjct: 70  KCPVCKSDVSEATLVPIYGRG-------QKAPQSGSNVPSR------------------- 129

Query: 152 SQELHPNYIRSPSHPIYHQQYFPQAYGDFASYAPSYLGNAVITSLLNPTIGMFGETVFTR 211
                      P+ P+Y  +   Q  G+  S    Y        + +P +G+  E V+ R
Sbjct: 130 -----------PTGPVYDLRGVGQRLGEGESQRYMY-------RMPDPVMGVVCEMVYRR 189

Query: 212 IFGSVDGNLLTYPAYNNNSIAGNASSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF 262
           +FG    N+  Y   N          R RR+ MQ ++SL+RV +FL C   +CL LF
Sbjct: 190 LFGESSSNMAPYRDMN---------VRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of Lag0037914 vs. TAIR 10
Match: AT2G23780.1 (RING/U-box superfamily protein )

HSP 1 Score: 112.5 bits (280), Expect = 5.3e-25
Identity = 59/139 (42.45%), Postives = 79/139 (56.83%), Query Frame = 0


Query: 6   STSEAFLDSDQDVSLKQNWKSISSQATVSEDANGCFDCNICFDSAADPVVTLCGHLYCWP 65
           STS ++ DS+ D                + D  G F+CNICF+ A DP+VTLCGHL+CWP
Sbjct: 7   STSTSYSDSNND----------------TNDQGGDFECNICFELAQDPIVTLCGHLFCWP 66

Query: 66  CIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGMAVPRR 125
           C+Y+WLH         ++Q CPVCKA +    LVPLYGRG + +D  SK+ + G+ +P R
Sbjct: 67  CLYRWLH------HHSHSQECPVCKAVVQDDKLVPLYGRGKNQTDPRSKR-YPGLRIPNR 122

Query: 126 P----PPSMNTQPHSNAAS 141
           P    P +    P   AAS
Sbjct: 127 PTGQRPETAAPPPQPEAAS 122

The following BLAST results are available for this feature:

BLAST of Lag0037914 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899693.1	2.2e-134	90.94	E3 ubiquitin-protein ligase RMA3 [Benincasa hispida]	[more]
XP_008452467.1	5.5e-133	90.80	PREDICTED: E3 ubiquitin-protein ligase RMA3 [Cucumis melo] >KAA0064336.1 E3 ubiq...	[more]
XP_004141226.1	3.9e-131	90.08	E3 ubiquitin-protein ligase RMA3 [Cucumis sativus] >KGN55135.1 hypothetical prot...	[more]
XP_022139659.1	1.9e-125	87.02	E3 ubiquitin-protein ligase RMA3-like [Momordica charantia]	[more]
XP_023521850.1	1.9e-125	85.06	E3 ubiquitin-protein ligase RMA3-like [Cucurbita pepo subsp. pepo] >XP_023521858...	[more]

BLAST of Lag0037914 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GUK7	7.4e-48	46.51	E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV...	[more]
Q6R567	9.3e-43	40.96	E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=...	[more]
O64425	1.8e-38	43.15	E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV...	[more]
P93030	2.7e-26	32.91	E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV...	[more]
Q09463	4.7e-18	43.40	E3 ubiquitin ligase rnf-5 OS=Caenorhabditis elegans OX=6239 GN=rnf-5 PE=1 SV=1	[more]

BLAST of Lag0037914 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VD79	2.7e-133	90.80	E3 ubiquitin-protein ligase RMA3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BTX0	2.7e-133	90.80	E3 ubiquitin-protein ligase RMA3 OS=Cucumis melo OX=3656 GN=LOC103493490 PE=4 SV...	[more]
A0A0A0KZN0	1.9e-131	90.08	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G637750 P...	[more]
A0A6J1CDN1	9.1e-126	87.02	E3 ubiquitin-protein ligase RMA3-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1J1I0	3.5e-125	84.67	E3 ubiquitin-protein ligase RMA3-like OS=Cucurbita maxima OX=3661 GN=LOC11148047...	[more]

BLAST of Lag0037914 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27470.1	5.2e-49	46.51	RING membrane-anchor 3	[more]
AT4G03510.1	1.3e-39	43.15	RING membrane-anchor 1	[more]
AT4G03510.2	1.3e-39	43.15	RING membrane-anchor 1	[more]
AT4G28270.1	1.9e-27	32.91	RING membrane-anchor 2	[more]
AT2G23780.1	5.3e-25	42.45	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 43..89 e-value: 1.5E-9 score: 47.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 43..90 score: 12.828597
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 2..106 e-value: 2.7E-17 score: 64.5
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 43..89 e-value: 1.0E-8 score: 34.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..143
None	No IPR available	PANTHER	PTHR12313:SF69	E3 UBIQUITIN-PROTEIN LIGASE RMA3-LIKE	coord: 2..261
None	No IPR available	CDD	cd16745	RING-HC_AtRMA_like	coord: 41..91 e-value: 9.05852E-26 score: 93.9079
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 23..96
IPR045103	E3 ubiquitin-protein ligase RNF5/RNF185-like	PANTHER	PTHR12313	E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED	coord: 2..261
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 58..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0037914.1	Lag0037914.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071712	ER-associated misfolded protein catabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0044390	ubiquitin-like protein conjugating enzyme binding
molecular_function	GO:0061630	ubiquitin protein ligase activity