Lag0037821 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0037821
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	DUF4283 domain-containing protein
Location	chr2: 9530405 .. 9531684 (+)
RNA-Seq Expression	Lag0037821
Synteny	Lag0037821

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGCTCTTCAACAACACTTATCAGCATATGCTTCAGTTAGCCCACTGCAACCAGATAAAGCCCTTCTTGCCTGTGAGAATGAGGAACAAGCTCAGGTCTTAGCTAATATCAGAGATTGGTATAAGGTTGGAAAATATCAGGTTAGATTTCTCCCATGGAACTCGGATATCATGAGTGGTGATCAGAAGGTCCCTTCATATGGGGGATGGATAAGAATCCGCAATCTTCCTATAGACAAATGGTCTGTGGAAACCTTCAAAAAGATTGGAGACGAGTGTGGGGGCTACTTAGAAACAGCGAACAAAACTCTGACCAGATTAGATATGATGGAGGTTTTGATAAAGGTAAAAACTAACCACACAGGTTTCATCCAGCGGAGGTACACATTCCATCATCGTCAGACAGCCCTACCAAGGTTGATATAGACCCATTCTTTGCGGAAGATTACTATATTGGATACATAGCCGGAATCCATGGAAAAATACCAACAGCTCCGACGACATCCGTTGATTCTCGCGCCGGAATATCTGGGAAATCTGTTGAGGAGCAAAGGGTTTCCAAGCCACGCGCCGCCCAGGGAAAGGAAATTGAAAAAGGGGATAATCCCCAAATTTCGTACAGTTGCGCCCTCCAAGGAACCCAAAAGAACGACTCTCACTCAGAGGATTATCAGACGCAATCAGACTGGGTCCCACACCTTCCAGAAGATCACGTGAATCCCCAATCTCATTTGCCATCTCCATCGGTTCATAAAAAACCCTATCCACACAAAACCCTAAGCCATATTCCCCAAACCGAGGCCCACCTCAATCATCAGCCCTCTCTACATCATGCCCCAAAAAGCCCACTTCATTCCGATGGCCCACCCCTGACCTGCTCTAACCAACCGAGCTGCCCCAATCCCAAAGCCCCTATAGTTTTAAACCACTCTACAGACTCCCCACCAACCAGCCCAATCCCATCCACCATCAACCAACAGGCTCGGAAAAAGCCCATCATCATTAACAATAAGGAAACGTACCTTCTCATGGGCACTGTACACTCAACTGGAGCGACTTATCACCTATCAGATTCGGAAGGAGCCTTTTCCTCCCCATGCTCTCCGAATATGGCTGAATCTCCCCCTAGTTGCAACAAAATGGCTAACATCCTAGTGGCTTCTCCTCCGACAATATCTCACCTATTTGAATCTTCAGAAGACCATGTCACTGATATTGAAAACCCCATCCCCTTGATGATTGAAAAGCCCTCTGGGCAGTATACCAGCAAGCTTTGA

mRNA sequence

ATGAGGGCTCTTCAACAACACTTATCAGCATATGCTTCAGTTAGCCCACTGCAACCAGATAAAGCCCTTCTTGCCTGTGAGAATGAGGAACAAGCTCAGGTCTTAGCTAATATCAGAGATTGGTATAAGGTTGGAAAATATCAGGTTAGATTTCTCCCATGGAACTCGGATATCATGAGTGGTGATCAGAAGGTCCCTTCATATGGGGGATGGATAAGAATCCGCAATCTTCCTATAGACAAATGGTTTCATCCAGCGGAGGTACACATTCCATCATCGTCAGACAGCCCTACCAAGGTTGATATAGACCCATTCTTTGCGGAAGATTACTATATTGGATACATAGCCGGAATCCATGGAAAAATACCAACAGCTCCGACGACATCCGTTGATTCTCGCGCCGGAATATCTGGGAAATCTGTTGAGGAGCAAAGGGTTTCCAAGCCACGCGCCGCCCAGGGAAAGGAAATTGAAAAAGGGGATAATCCCCAAATTTCGTACAGTTGCGCCCTCCAAGGAACCCAAAAGAACGACTCTCACTCAGAGGATTATCAGACGCAATCAGACTGGGTCCCACACCTTCCAGAAGATCACGTGAATCCCCAATCTCATTTGCCATCTCCATCGGTTCATAAAAAACCCTATCCACACAAAACCCTAAGCCATATTCCCCAAACCGAGGCCCACCTCAATCATCAGCCCTCTCTACATCATGCCCCAAAAAGCCCACTTCATTCCGATGGCCCACCCCTGACCTGCTCTAACCAACCGAGCTGCCCCAATCCCAAAGCCCCTATAGTTTTAAACCACTCTACAGACTCCCCACCAACCAGCCCAATCCCATCCACCATCAACCAACAGGCTCGGAAAAAGCCCATCATCATTAACAATAAGGAAACGTACCTTCTCATGGGCACTGTACACTCAACTGGAGCGACTTATCACCTATCAGATTCGGAAGGAGCCTTTTCCTCCCCATGCTCTCCGAATATGGCTGAATCTCCCCCTAGTTGCAACAAAATGGCTAACATCCTAGTGGCTTCTCCTCCGACAATATCTCACCTATTTGAATCTTCAGAAGACCATGTCACTGATATTGAAAACCCCATCCCCTTGATGATTGAAAAGCCCTCTGGGCAGTATACCAGCAAGCTTTGA

Coding sequence (CDS)

ATGAGGGCTCTTCAACAACACTTATCAGCATATGCTTCAGTTAGCCCACTGCAACCAGATAAAGCCCTTCTTGCCTGTGAGAATGAGGAACAAGCTCAGGTCTTAGCTAATATCAGAGATTGGTATAAGGTTGGAAAATATCAGGTTAGATTTCTCCCATGGAACTCGGATATCATGAGTGGTGATCAGAAGGTCCCTTCATATGGGGGATGGATAAGAATCCGCAATCTTCCTATAGACAAATGGTTTCATCCAGCGGAGGTACACATTCCATCATCGTCAGACAGCCCTACCAAGGTTGATATAGACCCATTCTTTGCGGAAGATTACTATATTGGATACATAGCCGGAATCCATGGAAAAATACCAACAGCTCCGACGACATCCGTTGATTCTCGCGCCGGAATATCTGGGAAATCTGTTGAGGAGCAAAGGGTTTCCAAGCCACGCGCCGCCCAGGGAAAGGAAATTGAAAAAGGGGATAATCCCCAAATTTCGTACAGTTGCGCCCTCCAAGGAACCCAAAAGAACGACTCTCACTCAGAGGATTATCAGACGCAATCAGACTGGGTCCCACACCTTCCAGAAGATCACGTGAATCCCCAATCTCATTTGCCATCTCCATCGGTTCATAAAAAACCCTATCCACACAAAACCCTAAGCCATATTCCCCAAACCGAGGCCCACCTCAATCATCAGCCCTCTCTACATCATGCCCCAAAAAGCCCACTTCATTCCGATGGCCCACCCCTGACCTGCTCTAACCAACCGAGCTGCCCCAATCCCAAAGCCCCTATAGTTTTAAACCACTCTACAGACTCCCCACCAACCAGCCCAATCCCATCCACCATCAACCAACAGGCTCGGAAAAAGCCCATCATCATTAACAATAAGGAAACGTACCTTCTCATGGGCACTGTACACTCAACTGGAGCGACTTATCACCTATCAGATTCGGAAGGAGCCTTTTCCTCCCCATGCTCTCCGAATATGGCTGAATCTCCCCCTAGTTGCAACAAAATGGCTAACATCCTAGTGGCTTCTCCTCCGACAATATCTCACCTATTTGAATCTTCAGAAGACCATGTCACTGATATTGAAAACCCCATCCCCTTGATGATTGAAAAGCCCTCTGGGCAGTATACCAGCAAGCTTTGA

Protein sequence

MRALQQHLSAYASVSPLQPDKALLACENEEQAQVLANIRDWYKVGKYQVRFLPWNSDIMSGDQKVPSYGGWIRIRNLPIDKWFHPAEVHIPSSSDSPTKVDIDPFFAEDYYIGYIAGIHGKIPTAPTTSVDSRAGISGKSVEEQRVSKPRAAQGKEIEKGDNPQISYSCALQGTQKNDSHSEDYQTQSDWVPHLPEDHVNPQSHLPSPSVHKKPYPHKTLSHIPQTEAHLNHQPSLHHAPKSPLHSDGPPLTCSNQPSCPNPKAPIVLNHSTDSPPTSPIPSTINQQARKKPIIINNKETYLLMGTVHSTGATYHLSDSEGAFSSPCSPNMAESPPSCNKMANILVASPPTISHLFESSEDHVTDIENPIPLMIEKPSGQYTSKL

Homology

[Close]

BLAST of Lag0037821 vs. NCBI nr
Match: KAA0050054.1 (hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 1.5e-09
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 4   LQQHLSAYASVSPLQPDKALLACENEEQAQVLANIRDWYKVGKYQVRFLPWNSDIMSGDQ 63
           L + L       P   DKAL+  +NEEQA ++   + W  VG++ V+F  WN    +  +
Sbjct: 259 LNEQLDTTVRYKPFHADKALICFKNEEQANLICKNKGWTTVGRFYVKFEEWNQKAHASPK 318

Query: 64  KVPSYGGWIRIRNLPIDKW 83
            +PSYGGWI++R +P+  W
Sbjct: 319 VIPSYGGWIKVRGVPLHAW 337

[Close]

BLAST of Lag0037821 vs. NCBI nr
Match: TYK10355.1 (hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 1.5e-09
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 4   LQQHLSAYASVSPLQPDKALLACENEEQAQVLANIRDWYKVGKYQVRFLPWNSDIMSGDQ 63
           L + L       P   DKAL+  +NEEQA ++   + W  VG++ V+F  WN    +  +
Sbjct: 311 LNEQLDTTVRYKPFHADKALICFKNEEQANLICKNKGWTTVGRFYVKFEEWNQKAHASPK 370

Query: 64  KVPSYGGWIRIRNLPIDKW 83
            +PSYGGWI++R +P+  W
Sbjct: 371 VIPSYGGWIKVRGVPLHAW 389

[Close]

BLAST of Lag0037821 vs. NCBI nr
Match: KAA0039967.1 (hypothetical protein E6C27_scaffold122G002490 [Cucumis melo var. makuwa])

HSP 1 Score: 73.9 bits (180), Expect = 3.3e-09
Identity = 29/79 (36.71%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 4   LQQHLSAYASVSPLQPDKALLACENEEQAQVLANIRDWYKVGKYQVRFLPWNSDIMSGDQ 63
           L + L       P + DKAL+  +NEEQA++L   + W  VG++ V+F  W+    +  +
Sbjct: 205 LNEQLDTTVRYKPFRADKALIYFKNEEQAKLLCKNKGWTTVGRFYVKFEEWSQKTHASPK 264

Query: 64  KVPSYGGWIRIRNLPIDKW 83
            +PSYGGWI++R +P+  W
Sbjct: 265 VIPSYGGWIKVRGVPLHAW 283

[Close]

BLAST of Lag0037821 vs. NCBI nr
Match: KAA0040039.1 (hypothetical protein E6C27_scaffold366G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 4.3e-09
Identity = 29/79 (36.71%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 4   LQQHLSAYASVSPLQPDKALLACENEEQAQVLANIRDWYKVGKYQVRFLPWNSDIMSGDQ 63
           L + L       P   DKAL+  +NEEQA++L   + W  VG++ V+F  W+    +  +
Sbjct: 221 LNEQLDTTVRYKPFHADKALIYFKNEEQAKLLCKNKGWTTVGRFYVKFEEWSQKTHASPK 280

Query: 64  KVPSYGGWIRIRNLPIDKW 83
            +PSYGGWI++R +P+  W
Sbjct: 281 VIPSYGGWIKVRGVPLHAW 299

[Close]

BLAST of Lag0037821 vs. NCBI nr
Match: TYK24535.1 (hypothetical protein E5676_scaffold266G00770 [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 4.3e-09
Identity = 29/79 (36.71%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 4   LQQHLSAYASVSPLQPDKALLACENEEQAQVLANIRDWYKVGKYQVRFLPWNSDIMSGDQ 63
           L + L       P   DKAL+  +NEEQA++L   + W  VG++ V+F  W+    +  +
Sbjct: 205 LNEQLDTTVRYKPFHADKALIYFKNEEQAKLLCKNKGWTTVGRFYVKFEEWSQKTHASPK 264

Query: 64  KVPSYGGWIRIRNLPIDKW 83
            +PSYGGWI++R +P+  W
Sbjct: 265 VIPSYGGWIKVRGVPLHAW 283

[Close]

BLAST of Lag0037821 vs. ExPASy TrEMBL
Match: A0A5A7U495 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00340 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 7.2e-10
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 4   LQQHLSAYASVSPLQPDKALLACENEEQAQVLANIRDWYKVGKYQVRFLPWNSDIMSGDQ 63
           L + L       P   DKAL+  +NEEQA ++   + W  VG++ V+F  WN    +  +
Sbjct: 259 LNEQLDTTVRYKPFHADKALICFKNEEQANLICKNKGWTTVGRFYVKFEEWNQKAHASPK 318

Query: 64  KVPSYGGWIRIRNLPIDKW 83
            +PSYGGWI++R +P+  W
Sbjct: 319 VIPSYGGWIKVRGVPLHAW 337

[Close]

BLAST of Lag0037821 vs. ExPASy TrEMBL
Match: A0A5D3CFS8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00330 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 7.2e-10
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 4   LQQHLSAYASVSPLQPDKALLACENEEQAQVLANIRDWYKVGKYQVRFLPWNSDIMSGDQ 63
           L + L       P   DKAL+  +NEEQA ++   + W  VG++ V+F  WN    +  +
Sbjct: 311 LNEQLDTTVRYKPFHADKALICFKNEEQANLICKNKGWTTVGRFYVKFEEWNQKAHASPK 370

Query: 64  KVPSYGGWIRIRNLPIDKW 83
            +PSYGGWI++R +P+  W
Sbjct: 371 VIPSYGGWIKVRGVPLHAW 389

[Close]

BLAST of Lag0037821 vs. ExPASy TrEMBL
Match: A0A5A7TEK8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002490 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-09
Identity = 29/79 (36.71%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 4   LQQHLSAYASVSPLQPDKALLACENEEQAQVLANIRDWYKVGKYQVRFLPWNSDIMSGDQ 63
           L + L       P + DKAL+  +NEEQA++L   + W  VG++ V+F  W+    +  +
Sbjct: 205 LNEQLDTTVRYKPFRADKALIYFKNEEQAKLLCKNKGWTTVGRFYVKFEEWSQKTHASPK 264

Query: 64  KVPSYGGWIRIRNLPIDKW 83
            +PSYGGWI++R +P+  W
Sbjct: 265 VIPSYGGWIKVRGVPLHAW 283

[Close]

BLAST of Lag0037821 vs. ExPASy TrEMBL
Match: A0A5A7TFK7 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00060 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.1e-09
Identity = 29/79 (36.71%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 4   LQQHLSAYASVSPLQPDKALLACENEEQAQVLANIRDWYKVGKYQVRFLPWNSDIMSGDQ 63
           L + L       P   DKAL+  +NEEQA++L   + W  VG++ V+F  W+    +  +
Sbjct: 221 LNEQLDTTVRYKPFHADKALIYFKNEEQAKLLCKNKGWTTVGRFYVKFEEWSQKTHASPK 280

Query: 64  KVPSYGGWIRIRNLPIDKW 83
            +PSYGGWI++R +P+  W
Sbjct: 281 VIPSYGGWIKVRGVPLHAW 299

[Close]

BLAST of Lag0037821 vs. ExPASy TrEMBL
Match: A0A5D3DLP0 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00770 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.1e-09
Identity = 29/79 (36.71%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 4   LQQHLSAYASVSPLQPDKALLACENEEQAQVLANIRDWYKVGKYQVRFLPWNSDIMSGDQ 63
           L + L       P   DKAL+  +NEEQA++L   + W  VG++ V+F  W+    +  +
Sbjct: 205 LNEQLDTTVRYKPFHADKALIYFKNEEQAKLLCKNKGWTTVGRFYVKFEEWSQKTHASPK 264

Query: 64  KVPSYGGWIRIRNLPIDKW 83
            +PSYGGWI++R +P+  W
Sbjct: 265 VIPSYGGWIKVRGVPLHAW 283

The following BLAST results are available for this feature:

BLAST of Lag0037821 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050054.1	1.5e-09	36.71	hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa]	[more]
TYK10355.1	1.5e-09	36.71	hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa]	[more]
KAA0039967.1	3.3e-09	36.71	hypothetical protein E6C27_scaffold122G002490 [Cucumis melo var. makuwa]	[more]
KAA0040039.1	4.3e-09	36.71	hypothetical protein E6C27_scaffold366G00060 [Cucumis melo var. makuwa]	[more]
TYK24535.1	4.3e-09	36.71	hypothetical protein E5676_scaffold266G00770 [Cucumis melo var. makuwa]	[more]

BLAST of Lag0037821 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0037821 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U495	7.2e-10	36.71	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3CFS8	7.2e-10	36.71	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TEK8	1.6e-09	36.71	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7TFK7	2.1e-09	36.71	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DLP0	2.1e-09	36.71	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Lag0037821 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0037821.1	Lag0037821.1	mRNA