Lag0037811 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCGCTTCAGAGCTCTTCACCGTCAAATCGATTCCCTTTCGACACTACGAAACCATCACTTCAGTTCACTGTCTACAAATCCCCTCCAATTTCACTCTCTTCCTTCTACTTCTCGAAGATCTCGAACTTTCTCGCTGAAAATCGAAGAGGGGTTCGGACCAGAATTTATAGACGAAAAGAAGAATATGCGTTCGGATTTGGTGGTTAACGAAGCCGCGAGATCGAATGGAAGTGTGCAATGTCGCGAGGGCAAAAGTAGAATCGAAGGGAGAGTGGATTCAAAAGGAAGAGAGAAATTGACGAGGGAGGATGCTTGGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACAATTGTACAAGGAAGGATATTTTAATTATGCGAATTTCTTGCCCGATAACAAACTGGTTCTTAGCTACTTTGAGTGTCGTCATGGACGGGATTTTATCAAATCTGCAGCCGAGCGGTTTGGCAGAGACAATCAAGAAATTGCAAAGTAAGACGAGTTTTGAGTTTAGCCATAAGTGTTGTCAATCTTGTGATTCTCATCGTTAATGCGTTAATATTGATGTCTCTGTTTCGTTTTTGTGTAATTTTTTGAGAATTGGTGAGAGGAGGTTTAATTTTTGCCACCAACGATTTCATCTATGAAGTATGAAGTGCCAGAAGAAGAATTCGTAATTTTTGCGAGTGGAAGAATAAACCATATCTCACGTAGTTGAAGGGCAAACATTATTATTATTTTGAATTTCATGCTTGTAGGTCATTTAATGGAAGTTTAGAAAATGACAATGTGAAACTACCGGTATAAATTACGATGAACTAATTAAGTCCATTTTTTAGCTTGTGCATCGACATGGGGAAACTATCCTTGGTTCTAGTTTTGAGCTTTTTCAAAACATGCTCTTATGCATCTTGTGGAAATTAAGACGAAGAAGAAATTGAGGTCATTTGGTTGGTTTAAGAATGGAGTGCGTTGATATTGGTTTTGAAAATAAGAAACTGTTATTGGTTTCTATTGGCGTCAGATTACTCCAACTATATTTAGTATCATACCTTTAACAATCATAGTGTGAATCATTCTTAGATGCATTATTTTGATAGAGTATGAAAGCTATGAAAAAGTATTTCTGGTTCACCTTCAAAAGGACCATGGTTAAAATCAAAAGTTTTGATTTTCAATATGAATATATGGAATAATGTTGCTGTTACTACCCTTAACTAAGGTTTATTATTTGGGTTGGCTGGTTTGTAGAGGTTGGTTGGTTCAGTCAGTTCTGTTTTTTTGTTTTAATTGGTCCAATTGATGATATTCATCTACCAATCTAAGTATAGTTCAACCGGTGTAAGCATGGGTAACCTCTGTGGAAGGATATTCAGCTAGAAGTAATAAAGCAAACCTGACCTGAACCAACCTCTATGCGAATTGTACTGCTGACTGAACATACTCGTCCCCCCCCTGATGTCATGCATGTGCTTGTGTTTGCCTGCTGCTTGATAATTGCTTTGAACCTTTATGGAACTGATAATTCAAGATTGTACAATATTTTGATGTGTCAGATTATCCAGTATAGAGTACTCAAGTGTAATAAATTACAAATTCTAACATTCTGATTTTGAAGGAAATAATTTGTCTGTTCCATCTTTCTGGTTCTGGCAGTTGTGTTTCTTTATGAAGACTTCCCCCTATTGTTTCACGTCTTGAACTCTGAGTCTTGGGATTTTCAGATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCTTTCTTTGGATGCCCATCCACTGCAAGAAAAGATGTCTTTGCTGCTAAAAGACTGCGAAAATTTTTTAGAATTCAAGAAGACACAGTAAGCATAAAAGCTCAGTAAATGTTACTTTTCTCCTTCTCTTACCATTTAAATATCTAGTAAAATCCTTTGGCTTTGTTTTCTTCCTTTTCAAATTATCCGCAGGTTTGTCACAAGTGCATCTTGAGACAATCATGCAAGTATGTGAATCAAGGTGTTTGGAATGGCGGCACCAACCATTTGAATTTGGCAGCCGTTATGCAGGTTATTACTCAATACGCCTTGGAAGCCATACCAAAACAACTAGTAATACCTGAAGATATAAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAGACTAAGCCCGACCGTGTCGAGGAACTAA ATGTCTCGCTTCAGAGCTCTTCACCGTCAAATCGATTCCCTTTCGACACTACGAAACCATCACTTCAGTTCACTGTCTACAAATCCCCTCCAATTTCACTCTCTTCCTTCTACTTCTCGAAGATCTCGAACTTTCTCGCTGAAAATCGAAGAGGGGTTCGGACCAGAATTTATAGACGAAAAGAAGAATATGCGTTCGGATTTGGTGGTTAACGAAGCCGCGAGATCGAATGGAAGTGTGCAATGTCGCGAGGGCAAAAGTAGAATCGAAGGGAGAGTGGATTCAAAAGGAAGAGAGAAATTGACGAGGGAGGATGCTTGGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACAATTGTACAAGGAAGGATATTTTAATTATGCGAATTTCTTGCCCGATAACAAACTGGTTCTTAGCTACTTTGAGTGTCGTCATGGACGGGATTTTATCAAATCTGCAGCCGAGCGGTTTGGCAGAGACAATCAAGAAATTGCAAAATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCTTTCTTTGGATGCCCATCCACTGCAAGAAAAGATGTCTTTGCTGCTAAAAGACTGCGAAAATTTTTTAGAATTCAAGAAGACACAGTTTGTCACAAGTGCATCTTGAGACAATCATGCAAGTATGTGAATCAAGGTGTTTGGAATGGCGGCACCAACCATTTGAATTTGGCAGCCGTTATGCAGGTTATTACTCAATACGCCTTGGAAGCCATACCAAAACAACTAGTAATACCTGAAGATATAAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAGACTAAGCCCGACCGTGTCGAGGAACTAA ATGTCTCGCTTCAGAGCTCTTCACCGTCAAATCGATTCCCTTTCGACACTACGAAACCATCACTTCAGTTCACTGTCTACAAATCCCCTCCAATTTCACTCTCTTCCTTCTACTTCTCGAAGATCTCGAACTTTCTCGCTGAAAATCGAAGAGGGGTTCGGACCAGAATTTATAGACGAAAAGAAGAATATGCGTTCGGATTTGGTGGTTAACGAAGCCGCGAGATCGAATGGAAGTGTGCAATGTCGCGAGGGCAAAAGTAGAATCGAAGGGAGAGTGGATTCAAAAGGAAGAGAGAAATTGACGAGGGAGGATGCTTGGGTCCGTAAAGAGCTTTCTCCGGACATGGAGATGTTTGTGAGACAATTGTACAAGGAAGGATATTTTAATTATGCGAATTTCTTGCCCGATAACAAACTGGTTCTTAGCTACTTTGAGTGTCGTCATGGACGGGATTTTATCAAATCTGCAGCCGAGCGGTTTGGCAGAGACAATCAAGAAATTGCAAAATGGTTGTCTGGCAGTGACTTGAGAAAGGTTGCTTTCTTTGGATGCCCATCCACTGCAAGAAAAGATGTCTTTGCTGCTAAAAGACTGCGAAAATTTTTTAGAATTCAAGAAGACACAGTTTGTCACAAGTGCATCTTGAGACAATCATGCAAGTATGTGAATCAAGGTGTTTGGAATGGCGGCACCAACCATTTGAATTTGGCAGCCGTTATGCAGGTTATTACTCAATACGCCTTGGAAGCCATACCAAAACAACTAGTAATACCTGAAGATATAAAGGCTTCTGTAAGCCGATTGCTGAAAGAGATATTGAGACTAAGCCCGACCGTGTCGAGGAACTAA MSRFRALHRQIDSLSTLRNHHFSSLSTNPLQFHSLPSTSRRSRTFSLKIEEGFGPEFIDEKKNMRSDLVVNEAARSNGSVQCREGKSRIEGRVDSKGREKLTREDAWVRKELSPDMEMFVRQLYKEGYFNYANFLPDNKLVLSYFECRHGRDFIKSAAERFGRDNQEIAKWLSGSDLRKVAFFGCPSTARKDVFAAKRLRKFFRIQEDTVCHKCILRQSCKYVNQGVWNGGTNHLNLAAVMQVITQYALEAIPKQLVIPEDIKASVSRLLKEILRLSPTVSRN Homology
BLAST of Lag0037811 vs. NCBI nr
Match: KAG6591767.1 (hypothetical protein SDJN03_14113, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 450.7 bits (1158), Expect = 9.5e-123 Identity = 232/283 (81.98%), Postives = 250/283 (88.34%), Query Frame = 0
BLAST of Lag0037811 vs. NCBI nr
Match: KAG7024649.1 (hypothetical protein SDJN02_13467, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 450.7 bits (1158), Expect = 9.5e-123 Identity = 232/283 (81.98%), Postives = 250/283 (88.34%), Query Frame = 0
BLAST of Lag0037811 vs. NCBI nr
Match: XP_022935982.1 (uncharacterized protein LOC111442720 [Cucurbita moschata]) HSP 1 Score: 448.4 bits (1152), Expect = 4.7e-122 Identity = 231/283 (81.63%), Postives = 249/283 (87.99%), Query Frame = 0
BLAST of Lag0037811 vs. NCBI nr
Match: XP_023536478.1 (uncharacterized protein LOC111797643 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 444.9 bits (1143), Expect = 5.2e-121 Identity = 229/283 (80.92%), Postives = 248/283 (87.63%), Query Frame = 0
BLAST of Lag0037811 vs. NCBI nr
Match: XP_022976827.1 (uncharacterized protein LOC111477088 [Cucurbita maxima]) HSP 1 Score: 442.6 bits (1137), Expect = 2.6e-120 Identity = 228/283 (80.57%), Postives = 248/283 (87.63%), Query Frame = 0
BLAST of Lag0037811 vs. ExPASy TrEMBL
Match: A0A6J1F747 (uncharacterized protein LOC111442720 OS=Cucurbita moschata OX=3662 GN=LOC111442720 PE=4 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 2.3e-122 Identity = 231/283 (81.63%), Postives = 249/283 (87.99%), Query Frame = 0
BLAST of Lag0037811 vs. ExPASy TrEMBL
Match: A0A6J1IGS8 (uncharacterized protein LOC111477088 OS=Cucurbita maxima OX=3661 GN=LOC111477088 PE=4 SV=1) HSP 1 Score: 442.6 bits (1137), Expect = 1.3e-120 Identity = 228/283 (80.57%), Postives = 248/283 (87.63%), Query Frame = 0
BLAST of Lag0037811 vs. ExPASy TrEMBL
Match: A0A0A0L4J9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G625010 PE=4 SV=1) HSP 1 Score: 404.1 bits (1037), Expect = 4.9e-109 Identity = 211/288 (73.26%), Postives = 233/288 (80.90%), Query Frame = 0
BLAST of Lag0037811 vs. ExPASy TrEMBL
Match: A0A5A7VHD0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00760 PE=4 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 6.3e-104 Identity = 208/288 (72.22%), Postives = 228/288 (79.17%), Query Frame = 0
BLAST of Lag0037811 vs. ExPASy TrEMBL
Match: A0A6J1CC23 (uncharacterized protein LOC111009818 OS=Momordica charantia OX=3673 GN=LOC111009818 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 1.2e-78 Identity = 167/264 (63.26%), Postives = 184/264 (69.70%), Query Frame = 0
BLAST of Lag0037811 vs. TAIR 10
Match: AT1G53460.1 (BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 485 Blast hits to 413 proteins in 88 species: Archae - 11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). ) HSP 1 Score: 198.4 bits (503), Expect = 7.9e-51 Identity = 104/221 (47.06%), Postives = 145/221 (65.61%), Query Frame = 0
BLAST of Lag0037811 vs. TAIR 10
Match: AT1G55040.1 (zinc finger (Ran-binding) family protein ) HSP 1 Score: 70.9 bits (172), Expect = 1.9e-12 Identity = 50/185 (27.03%), Postives = 86/185 (46.49%), Query Frame = 0
BLAST of Lag0037811 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein ) HSP 1 Score: 62.0 bits (149), Expect = 8.9e-10 Identity = 55/174 (31.61%), Postives = 84/174 (48.28%), Query Frame = 0
BLAST of Lag0037811 vs. TAIR 10
Match: AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein ) HSP 1 Score: 62.0 bits (149), Expect = 8.9e-10 Identity = 55/174 (31.61%), Postives = 84/174 (48.28%), Query Frame = 0
BLAST of Lag0037811 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein ) HSP 1 Score: 57.0 bits (136), Expect = 2.9e-08 Identity = 51/170 (30.00%), Postives = 78/170 (45.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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