Lag0037807 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0037807
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Non-specific serine/threonine protein kinase
Location	chr2: 9411233 .. 9414307 (+)
RNA-Seq Expression	Lag0037807
Synteny	Lag0037807

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTGAAGAGTGTTCATGTTCTTGTCTGTGGATTGCTGCTTTTCAACTGCTTCTTGGAATTTGGATCGGATGCCCAAACTCTGCCTGAACAAGAAGGTACCATCATTTTATTATTTCATTTTTTCCATGTTCTCGGTTGCCGAAATTTGGTTGTTTCCTTTGCCTTTTCTGTTCTTTCGTTGTGAAATTTGATCTGTTACGGTGTCTATTCATTATATCCAAATTGATCTGTTACGGTGTCTATTCATTATATCCAAAGTGTTTTTTTTTTTTTTAAAGGTTCATAGGTAACAAAACCGTTGAGTTACAAATTAGCCTCTAGTAGATTGGGCATAGTTTCAACTTTTGTTTCTACAGTTTTAAGATTATCAATTTTTTTTTTTTTTTGAACAAAAAAGATTATCAATTTAGTCTTTTTTTTCTTTTTTTTTGAAACAGATTATCAATTTAGTCCTTATTGTTATTAGTTATCACTGTATTAAATATTGCAACAACCTTTTTTCACGGAAATGGTAGGATTATTTTCTATTTGATTGATTGTATAAAGTTCCTTACTAAAAAAAATAGGTGAATTTTTTTATTAGTAAATGACGGTTTAGGAAGGATTAGTGAGTTTTGACTAAACTATCTTGTCTAAATTGAAGCTTTTAAAATCACAAGGACCCAGGGTGGATGCAGGGTGTATGTATGTATTAGTTGTTCTGTAAATTTTTCAAGAAGAAAAATTGGCTACATACCAATATGTAGGGAGTCCATTAAAATCTTGACAACTAAGAAAGAGGAAAAAAGAAAATAAGAAATTTTTTTATCTCTCCTAGTTGTCAACATTTTAATGGTTGGTATGCAGGGAGATCCCTACGTATCGGTATGCAGCCAAGTTTTTTCTATTTTTCAATTACATCCACTTGAAACGTTGGTGGGGGCCAGGGGCGTCGTGCTTCAAATCTCGTGCAACGCATATTTTTTTGTTTCATTTTTTTATTTATTTCTAGATTATTCTTTTTATGTTATTGTTTCAGTTAGTTAAAATTGAGTTCATTTGCATATTGGTTTGTTTTATTTTTTATTTTTTATTATTTTATAGATTATTTTTTTAATTTTTTATTTTAATTGGTTAAAATTTAGTTTATTTTTAAATTTTTCTCACATATGAAAAAAGAATCATTCTATATAAAAAATTTTGATAAATATTTCAAGTTTCATTTTTTACTAATTATAAATTATGTGGATGAGTCTACAATAGATTGTTATAAATTTATAATTAATATTACCTAGTCTATCGATGCATTTAAAATTATATTTATATAAAGATTAAGTTAGAAGTTTAGGTTCATAAATTTTCAAATTTGAATTTAATTGGTTTCAACTTTCAATTTTACTTTTAAAAATTGAGAATGAATTAATGTTAAAATAATATTATTTTGTACGATTTTTCTAGGACATACATTAAAGTAAATTCACAAATTTGTAATTTTTAAAGAATTATCTTTCAATTAAAAAAATATTGTGAGAAAACAAAATAAAAATCAATTATCTTTAACATGTTTTAATGAAATATACACTTTTTCTTAAATTAAAAAGAAAAACGAACAATTGTTTCAAAATAGTTTCCAAATTAACTCCTATAATTAACTATAGATTCCAACTTAAGGTTTTCCAACTTATTTTTATCATTAAAAAAAATATATTTTTTGAAGAACGTAAGTTTTTTAGACTGCGGTTTGAAAGGGAAATTCGGGAAAATAAATAAACACACTTGCGTCCCGCGTATATCGAACCCATGCCCTATCATGCCCTCTTACCAATGAACTAAACTCCAGTTTTGATTTTTGAAATGATTTTTATATATTAATATTATAAACGGTCCATTATATTATATTAAAAATATAAAGACGGGATAATTTGAGGGGGCACGTGCCCCCGACCCCTTCATGGATCCGCCCCTGGTCTGAACTAAGTTGAATTATGTTCATGTTAGTTATTTTCCAATTTTTACTTAGTTTTGTGTTTAACTCTAAACATAATTTAGGTTTAAATACTATTTTGGTCCCTGTACTTTTGGTTTTTGTTTATTTTGATTCATATACTTTTAAAATGTCCATTTTAATCCTTGTACTTTGAACTTTAGTTAATTTTGGTTCTTGTACTTTCAAATGTTCTAGTTCCTGTGCTTTTAAAAAAAAGACCAATTTGGTTCGTTCATTTTCAATTTTTACTCTTTATTTATTATGGTTTTAACAATGACACTTTACTTTTTAAAATTATAAGGACCAAAATGAACGTTTTGAAAGTATAAAGATTAAAATGAACTAAAGCTTAAAGTACAAGGATCAAAATGAATATTTTAAAAGTATAGGGACCAAAATAAATTAAAGTAAAAATACAATGACTAAAATAGTATTTAAACCTATAATTTATTTAAAAAAACATGATATATTTGGCATTCATGTTAGGGCTGCATAATTTTCTAAAATATTTATGCATATTTATCTTTTTGAAAGTAATTGCAAATATAACATATTTTTTAAAATAATTGTATTTTCTTTAATATATATATATATATATATATATATATATATATATATATATATATATATTAATCACCCATACCTACACTATTATACTCATTAACTACAATATATCAACACTTGTTGCAAGTTGGACTACAACATTGAAAAATTTTCTAGTACTACCGAAGTACCATATTCCCTCTATTCATACTATGATTTTGTCTCCATAAATAATATATCTTTAATACTTGTGAACCGTACAACATTTTTCAAAAAAAAATACACCTCATGTCGACCAGAATGAAAACCATAGTAGAAAAAAGTATAATTTTCAAAAACAAAAACATTATCAAACTTTCTCTTGATACTGAGTTGGGATGTGGGTGTGTGACAGTGAGAGCCCTTGGAGAAATATCTGCAGAGCTAAAGAACTTAAATTGGAATGTCCACCAAAATTCTTGCATTAATGGCGACGGCTTTTTCAATAATTTTACCAGTTGGACTCTTATGAGAGAGGTCAACTGCACTTGCACTACGACTTGCAGCGTCACCACCATGTAA

mRNA sequence

ATGGATTTGAAGAGTGTTCATGTTCTTGTCTGTGGATTGCTGCTTTTCAACTGCTTCTTGGAATTTGGATCGGATGCCCAAACTCTGCCTGAACAAGAAGTGAGAGCCCTTGGAGAAATATCTGCAGAGCTAAAGAACTTAAATTGGAATGTCCACCAAAATTCTTGCATTAATGGCGACGGCTTTTTCAATAATTTTACCAGTTGGACTCTTATGAGAGAGGTCAACTGCACTTGCACTACGACTTGCAGCGTCACCACCATGTAA

Coding sequence (CDS)

ATGGATTTGAAGAGTGTTCATGTTCTTGTCTGTGGATTGCTGCTTTTCAACTGCTTCTTGGAATTTGGATCGGATGCCCAAACTCTGCCTGAACAAGAAGTGAGAGCCCTTGGAGAAATATCTGCAGAGCTAAAGAACTTAAATTGGAATGTCCACCAAAATTCTTGCATTAATGGCGACGGCTTTTTCAATAATTTTACCAGTTGGACTCTTATGAGAGAGGTCAACTGCACTTGCACTACGACTTGCAGCGTCACCACCATGTAA

Protein sequence

MDLKSVHVLVCGLLLFNCFLEFGSDAQTLPEQEVRALGEISAELKNLNWNVHQNSCINGDGFFNNFTSWTLMREVNCTCTTTCSVTTM

Homology

[Close]

BLAST of Lag0037807 vs. NCBI nr
Match: XP_023525944.1 (probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 134.4 bits (337), Expect = 4.7e-28
Identity = 66/83 (79.52%), Postives = 73/83 (87.95%), Query Frame = 0


Query: 6  VHVLVCGLLLFNCFLEFGSDAQTLPEQEVRALGEISAELKNLNWNVHQNSCINGDGFFNN 65
          VHVLV GLLLF+  LEFG+DAQ LPEQEVRAL EISA+LKNLNW VHQNSCINGDGFFN 
Sbjct: 17 VHVLVSGLLLFSYILEFGTDAQLLPEQEVRALQEISAKLKNLNWKVHQNSCINGDGFFNV 76

Query: 66 FTSWTLMREVNCTCTTTCSVTTM 89
          FT++T MREVNCTC TTC VT++
Sbjct: 77 FTNFTHMREVNCTCNTTCRVTSI 99

[Close]

BLAST of Lag0037807 vs. NCBI nr
Match: XP_022981268.1 (probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Cucurbita maxima])

HSP 1 Score: 134.4 bits (337), Expect = 4.7e-28
Identity = 66/83 (79.52%), Postives = 73/83 (87.95%), Query Frame = 0


Query: 6  VHVLVCGLLLFNCFLEFGSDAQTLPEQEVRALGEISAELKNLNWNVHQNSCINGDGFFNN 65
          VHVLV GLLLF+  LEFG+DAQ LPEQEVRAL EISA+LKNLNW VHQNSCINGDGFFN 
Sbjct: 13 VHVLVSGLLLFSYILEFGTDAQLLPEQEVRALQEISAKLKNLNWKVHQNSCINGDGFFNV 72

Query: 66 FTSWTLMREVNCTCTTTCSVTTM 89
          FT++T MREVNCTC TTC VT++
Sbjct: 73 FTNFTHMREVNCTCNTTCRVTSI 95

[Close]

BLAST of Lag0037807 vs. NCBI nr
Match: XP_022940854.1 (probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Cucurbita moschata])

HSP 1 Score: 132.5 bits (332), Expect = 1.8e-27
Identity = 65/83 (78.31%), Postives = 73/83 (87.95%), Query Frame = 0


Query: 6   VHVLVCGLLLFNCFLEFGSDAQTLPEQEVRALGEISAELKNLNWNVHQNSCINGDGFFNN 65
           VHVLV GLLLF+  LEFG+DAQ LPEQEVRAL EISA+LKNLNW VHQ+SCINGDGFFN 
Sbjct: 50  VHVLVSGLLLFSYILEFGTDAQLLPEQEVRALQEISAKLKNLNWKVHQHSCINGDGFFNV 109

Query: 66  FTSWTLMREVNCTCTTTCSVTTM 89
           FT++T MREVNCTC TTC VT++
Sbjct: 110 FTNFTHMREVNCTCNTTCRVTSI 132

[Close]

BLAST of Lag0037807 vs. NCBI nr
Match: KAG6607938.1 (putative LRR receptor-like serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 128.3 bits (321), Expect = 3.4e-26
Identity = 64/83 (77.11%), Postives = 71/83 (85.54%), Query Frame = 0


Query: 6   VHVLVCGLLLFNCFLEFGSDAQTLPEQEVRALGEISAELKNLNWNVHQNSCINGDGFFNN 65
           V VLV GLLLF+  LEFG+DAQ LPEQEVRAL EISA+LKNLNW VHQNSCINGDGF N 
Sbjct: 852 VRVLVSGLLLFSYILEFGTDAQLLPEQEVRALQEISAKLKNLNWKVHQNSCINGDGFSNV 911

Query: 66  FTSWTLMREVNCTCTTTCSVTTM 89
           FT++T MREVNCTC TTC VT++
Sbjct: 912 FTNFTHMREVNCTCNTTCRVTSI 934

[Close]

BLAST of Lag0037807 vs. NCBI nr
Match: XP_022136550.1 (probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Momordica charantia])

HSP 1 Score: 125.2 bits (313), Expect = 2.8e-25
Identity = 62/84 (73.81%), Postives = 71/84 (84.52%), Query Frame = 0


Query: 6   VHVLV-CGLLLFNCFLEFGSDAQTLPEQEVRALGEISAELKNLNWNVHQNSCINGDGFFN 65
           VHVL+ C  LLFNCFL+FGSDAQ+LP+QEVRAL  ISAELKNLNW VH+NSCINGDGF N
Sbjct: 19  VHVLICCWFLLFNCFLDFGSDAQSLPQQEVRALEAISAELKNLNWKVHKNSCINGDGFSN 78

Query: 66  NFTSWTLMREVNCTCTTTCSVTTM 89
              + T MREVNC+CTT CSVT++
Sbjct: 79  MVWNQTHMREVNCSCTTICSVTSI 102

[Close]

BLAST of Lag0037807 vs. ExPASy Swiss-Prot
Match: C0LGG8 (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana OX=3702 GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 3.8e-04
Identity = 33/90 (36.67%), Postives = 47/90 (52.22%), Query Frame = 0


Query: 4  KSVHVLVCGLLLFNCFLEFGSDAQTLPEQEVRALGEISAELKNLNWNVHQNSCINGD-GF 63
          K V+VL   LL+F C   FGS+AQ LPE EV+ L  I  +L+N   N+ + SC + +  F
Sbjct: 9  KVVYVL---LLIFVCLENFGSNAQLLPEDEVQTLRTIFRKLQNQTVNIERTSCSDQNWNF 68

Query: 64 FNNFTSWTLMREVNCTCT----TTCSVTTM 89
               S +    + C CT    + C VT +
Sbjct: 69 VVESASNSPTSNITCDCTFNASSVCRVTNI 95

[Close]

BLAST of Lag0037807 vs. ExPASy Swiss-Prot
Match: C0LGG9 (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana OX=3702 GN=At1g53440 PE=2 SV=2)

HSP 1 Score: 44.3 bits (103), Expect = 8.4e-04
Identity = 29/81 (35.80%), Postives = 42/81 (51.85%), Query Frame = 0


Query: 13 LLLFNCFLEFGSDAQTLPEQEVRALGEISAELKNLNWNVHQNSCINGD-GFFNNFTSWTL 72
          L++F C   FGS+AQ LPE EV+ L  I  +L+N   N+ + SC++    F    TS   
Sbjct: 13 LIIFICLDIFGSNAQLLPEDEVQTLRTIFRKLQNQTVNIERTSCLDRKWNFVAESTSKLP 72

Query: 73 MREVNCTCT----TTCSVTTM 89
             + C CT    + C VT +
Sbjct: 73 TSNITCDCTFNASSVCRVTNI 93

The following BLAST results are available for this feature:

BLAST of Lag0037807 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023525944.1	4.7e-28	79.52	probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Cucurbita ...	[more]
XP_022981268.1	4.7e-28	79.52	probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Cucurbita ...	[more]
XP_022940854.1	1.8e-27	78.31	probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Cucurbita ...	[more]
KAG6607938.1	3.4e-26	77.11	putative LRR receptor-like serine/threonine-protein kinase, partial [Cucurbita a...	[more]
XP_022136550.1	2.8e-25	73.81	probable LRR receptor-like serine/threonine-protein kinase At1g53440 [Momordica ...	[more]

BLAST of Lag0037807 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C0LGG8	3.8e-04	36.67	Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidop...	[more]
C0LGG9	8.4e-04	35.80	Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidop...	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0037807.1	Lag0037807.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0106310	protein serine kinase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0004712	protein serine/threonine/tyrosine kinase activity