Lag0037732 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0037732
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr2: 8658941 .. 8659567 (-)
RNA-Seq Expression	Lag0037732
Synteny	Lag0037732

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACATGTGTTCTTGGGAAGACGACGAGGAGAAAGAGAGACTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTCTGCAAATTCCCCGACAACTCCGCCTTCGATTTCGACTACTCTCAGAGCACCATCTGGTCCCCTTTGGTCCCTCGGCCTTACAACTCCATGGATTTGGACGTCATTACCCCCATCAAGCTTCCTTCTGATTCGGAAATGGCGATGGAGCAGTCGACCACGGCGGAGAAGAACAGTTTGAAGAAAGTCACCTCCAACCTCAAGAAGAAGCTCCTCTCCAATGGCTTCAGCATCGGTTTCGGCATTTCAAAGAGCAACAGGAAGATGAAGAGGATGAAGAACAAGAAAATGGCCTCTGATTTCTCCCCCACGCCTCTGAAAGGTGCTTGTTATCCAAATAACAAAAAGGTCAGTTTTGAATCTTGATTTCATTTTGTGTAGCTACTGAAAGCTGACTGCTCTTATTGTTCTTCACTGCATTTTAACTTAAACTCCATGAATGATTAGGGATGGAGCAAGTTGCTGAGAGCAGCCACCAAGCATTTCAAGAAGAAGAAGAAGAAGGATCCTACCTCTCAAATGAAACTCTATTTCTAA

mRNA sequence

ATGAACATGTGTTCTTGGGAAGACGACGAGGAGAAAGAGAGACTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTCTGCAAATTCCCCGACAACTCCGCCTTCGATTTCGACTACTCTCAGAGCACCATCTGGTCCCCTTTGGTCCCTCGGCCTTACAACTCCATGGATTTGGACGTCATTACCCCCATCAAGCTTCCTTCTGATTCGGAAATGGCGATGGAGCAGTCGACCACGGCGGAGAAGAACAGTTTGAAGAAAGTCACCTCCAACCTCAAGAAGAAGCTCCTCTCCAATGGCTTCAGCATCGGTTTCGGCATTTCAAAGAGCAACAGGAAGATGAAGAGGATGAAGAACAAGAAAATGGCCTCTGATTTCTCCCCCACGCCTCTGAAAGGTGCTTGTTATCCAAATAACAAAAAGGGATGGAGCAAGTTGCTGAGAGCAGCCACCAAGCATTTCAAGAAGAAGAAGAAGAAGGATCCTACCTCTCAAATGAAACTCTATTTCTAA

Coding sequence (CDS)

ATGAACATGTGTTCTTGGGAAGACGACGAGGAGAAAGAGAGACTGATCAAAGTGGTGGAGTATTTGGAGCCATTGATGTCCAAAGAGCTTCTCTGCAAATTCCCCGACAACTCCGCCTTCGATTTCGACTACTCTCAGAGCACCATCTGGTCCCCTTTGGTCCCTCGGCCTTACAACTCCATGGATTTGGACGTCATTACCCCCATCAAGCTTCCTTCTGATTCGGAAATGGCGATGGAGCAGTCGACCACGGCGGAGAAGAACAGTTTGAAGAAAGTCACCTCCAACCTCAAGAAGAAGCTCCTCTCCAATGGCTTCAGCATCGGTTTCGGCATTTCAAAGAGCAACAGGAAGATGAAGAGGATGAAGAACAAGAAAATGGCCTCTGATTTCTCCCCCACGCCTCTGAAAGGTGCTTGTTATCCAAATAACAAAAAGGGATGGAGCAAGTTGCTGAGAGCAGCCACCAAGCATTTCAAGAAGAAGAAGAAGAAGGATCCTACCTCTCAAATGAAACTCTATTTCTAA

Protein sequence

MNMCSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNSMDLDVITPIKLPSDSEMAMEQSTTAEKNSLKKVTSNLKKKLLSNGFSIGFGISKSNRKMKRMKNKKMASDFSPTPLKGACYPNNKKGWSKLLRAATKHFKKKKKKDPTSQMKLYF

Homology

[Close]

BLAST of Lag0037732 vs. NCBI nr
Match: XP_022976862.1 (uncharacterized protein LOC111477106 [Cucurbita maxima])

HSP 1 Score: 296.6 bits (758), Expect = 1.4e-76
Identity = 153/176 (86.93%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 1   MNMCSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNS 60
           MNM SWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY S
Sbjct: 1   MNMRSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYQS 60

Query: 61  MDLDVITPIKLPSDSEMAMEQSTTAEKNSLKKVTSNLKKKLLSNGFSIGFGISKSNRKMK 120
           MDLD+ITPIKLPSDSEMA  + TTAEKNSLKK TSNLKKKLLSNG SI FGISKSNRKMK
Sbjct: 61  MDLDLITPIKLPSDSEMAASEKTTAEKNSLKKATSNLKKKLLSNGVSIRFGISKSNRKMK 120

Query: 121 RMKNKKMASDFSPTPLK-GACYPNNKKGWSKLLRAATKHFKKKKKKDPTSQMKLYF 176
           +MKNKK+A+DFSP PL+  ACYP+NKK WSKLL+AATKHF KKKKKDP +QMKLYF
Sbjct: 121 KMKNKKLAADFSPKPLQAAACYPHNKKAWSKLLKAATKHF-KKKKKDPATQMKLYF 175

[Close]

BLAST of Lag0037732 vs. NCBI nr
Match: XP_038898299.1 (uncharacterized protein LOC120085999 [Benincasa hispida])

HSP 1 Score: 294.7 bits (753), Expect = 5.4e-76
Identity = 156/177 (88.14%), Postives = 164/177 (92.66%), Query Frame = 0


Query: 1   MNMCSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNS 60
           MN+ S EDDEE+ERLIKVVEYLEP MSK+LLCKFPDNSAFDF+YSQSTIWSPLVPRPY+S
Sbjct: 1   MNLQSREDDEERERLIKVVEYLEPFMSKQLLCKFPDNSAFDFNYSQSTIWSPLVPRPYHS 60

Query: 61  MDLDVITPIKLPSDSEMAMEQSTTAEKNSLKKVTSNLKKKLLSNGFSIGFGISKSNRKMK 120
           MDLDVITPIKLPSD EMA E  TTAEKNSL+K TSNLKKKLL NGFSI FGISKSNRKM 
Sbjct: 61  MDLDVITPIKLPSDFEMATE--TTAEKNSLRKATSNLKKKLLFNGFSISFGISKSNRKMN 120

Query: 121 RMKNKKMASDFSPTPLK-GACYPNNKKGWSKLLRAATKHF-KKKKKKDPTSQMKLYF 176
           RMKNKK+ASDFSPTPL+ GACYPNNKKGWSKLLRAATKHF KKKKKKDPTSQMKLYF
Sbjct: 121 RMKNKKLASDFSPTPLQGGACYPNNKKGWSKLLRAATKHFKKKKKKKDPTSQMKLYF 175

[Close]

BLAST of Lag0037732 vs. NCBI nr
Match: KAG6591792.1 (hypothetical protein SDJN03_14138, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024669.1 hypothetical protein SDJN02_13487 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 294.3 bits (752), Expect = 7.0e-76
Identity = 155/176 (88.07%), Postives = 163/176 (92.61%), Query Frame = 0


Query: 1   MNMCSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNS 60
           MNM SWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY+S
Sbjct: 1   MNMRSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60

Query: 61  MDLDVITPIKLPSDSEMAMEQSTTAEKNSLKKVTSNLKKKLLSNGFSIGFGISKSNRKMK 120
           MDLD+ITPIKLPSDSEMA   STTAEKNSLKK TSNLKKKLLSNG SI FGISKSNRKMK
Sbjct: 61  MDLDLITPIKLPSDSEMA--ASTTAEKNSLKKATSNLKKKLLSNGVSIRFGISKSNRKMK 120

Query: 121 RMKNKKMASDFSPTPLK-GACYPNNKKGWSKLLRAATKHFKKKKKKDPTSQMKLYF 176
           +MKNKK+A+DFSP PL+  ACYP+NKK WSKLL+AATKHF KKKKKDP SQMKLYF
Sbjct: 121 KMKNKKLAADFSPKPLQAAACYPHNKKAWSKLLKAATKHF-KKKKKDPASQMKLYF 173

[Close]

BLAST of Lag0037732 vs. NCBI nr
Match: XP_022936857.1 (uncharacterized protein LOC111443318 [Cucurbita moschata])

HSP 1 Score: 292.4 bits (747), Expect = 2.7e-75
Identity = 151/176 (85.80%), Postives = 160/176 (90.91%), Query Frame = 0


Query: 1   MNMCSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNS 60
           MNM SWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY S
Sbjct: 1   MNMRSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYQS 60

Query: 61  MDLDVITPIKLPSDSEMAMEQSTTAEKNSLKKVTSNLKKKLLSNGFSIGFGISKSNRKMK 120
           MDLD+ITPIKLPSDSEM   + T AEKNSLK+ TSNLKKKLLSNG SI FGISKSNRKMK
Sbjct: 61  MDLDLITPIKLPSDSEMVASEKTMAEKNSLKEATSNLKKKLLSNGVSIRFGISKSNRKMK 120

Query: 121 RMKNKKMASDFSPTPLK-GACYPNNKKGWSKLLRAATKHFKKKKKKDPTSQMKLYF 176
           +MKNKK+A+DFSP PL+  ACYP+NKK WSKLL+AATKHF KKKKKDP SQMKLYF
Sbjct: 121 KMKNKKLAADFSPKPLQPAACYPHNKKAWSKLLKAATKHF-KKKKKDPASQMKLYF 175

[Close]

BLAST of Lag0037732 vs. NCBI nr
Match: XP_023536350.1 (uncharacterized protein LOC111797546 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.0 bits (746), Expect = 3.5e-75
Identity = 154/176 (87.50%), Postives = 161/176 (91.48%), Query Frame = 0


Query: 1   MNMCSWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYNS 60
           MNM  WEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPY+S
Sbjct: 1   MNMRPWEDDEEKERLIKVVEYLEPLMSKELLCKFPDNSAFDFDYSQSTIWSPLVPRPYHS 60

Query: 61  MDLDVITPIKLPSDSEMAMEQSTTAEKNSLKKVTSNLKKKLLSNGFSIGFGISKSNRKMK 120
           MDLD+ITPIKLPSDSEMA   STT EKNSLKK TSNLKKKLLSNG SI FGISKSNRKMK
Sbjct: 61  MDLDLITPIKLPSDSEMA-ASSTTVEKNSLKKATSNLKKKLLSNGVSIRFGISKSNRKMK 120

Query: 121 RMKNKKMASDFSPTPLK-GACYPNNKKGWSKLLRAATKHFKKKKKKDPTSQMKLYF 176
           +MKNKKMA+DFSP PL+  ACYP+NKK WSKLL+AATKHF KKKKKDP SQMKLYF
Sbjct: 121 KMKNKKMAADFSPKPLQAAACYPHNKKAWSKLLKAATKHF-KKKKKDPASQMKLYF 174

The following BLAST results are available for this feature:

BLAST of Lag0037732 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022976862.1	1.4e-76	86.93	uncharacterized protein LOC111477106 [Cucurbita maxima]	[more]
XP_038898299.1	5.4e-76	88.14	uncharacterized protein LOC120085999 [Benincasa hispida]	[more]
KAG6591792.1	7.0e-76	88.07	hypothetical protein SDJN03_14138, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022936857.1	2.7e-75	85.80	uncharacterized protein LOC111443318 [Cucurbita moschata]	[more]
XP_023536350.1	3.5e-75	87.50	uncharacterized protein LOC111797546 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lag0037732 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34287	OS06G0551500 PROTEIN-RELATED	coord: 6..173
None	No IPR available	PANTHER	PTHR34287:SF4	OSJNBB0116K07.5 PROTEIN	coord: 6..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0037732.1	Lag0037732.1	mRNA