Lag0037715 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0037715
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRNase H domain-containing protein
Locationchr2: 8582855 .. 8584029 (-)
RNA-Seq ExpressionLag0037715
SyntenyLag0037715
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAGCCTAAAGGGGGTTTTTCAGTCCGAAGCGCTTATCACTTGGCGTCTCAACTCCAAAACAGCAACAAGGCCTCGTCTTCAGCAGGGGAGAATTCTGTTCCCCTTTGGAGGAATTTTTGGAAGATCAAGGCCATTCCAAAGGCCAAGATCTGTGCGTGGCGGATTCTCCAGGACTCCATTCCAACCCGCCTAAACATTCAAAAGAAAGGGATCTCTTCTAACCCCCTTTGTATTCGGTGCAGGAAATTCGAGGAGTCGACGGTGCACGCGATATGGGACTGTAAGTATCCTAAAAAAGTGTGGATCGATCTGATTCCCCTAACGAAAGATCTCTTTAACTTATACAGGTTCAATTGGAGGCCTATAGACTATTGGGAGTGGATGGCTAGGAACCTAAGCAGCGGGGATTTGGAGCTGTCTATTCATCTGCTTTGGGGCATTTGGAAAAACAGAAACAATATCCTCCACAATTCAAATTTGCCCAGCCACAGTGATATCGCAAAGAATTTAAACCTCATCACTTCAGAGTGTTTAGCTTTGAAAAGTTCTAACCTGGGTGCATCTCCGGAGGTTCTTGGCAGTAGGAGGAAGAGCCAGCCGAGTCATGAGTCCTGGATGCCCTCGCCGAAAGGTTCGTGGAAATTAAATGTCGACGCCTCCTGGAATGCGCATCAGATCAAAGGAGGGGTGGGTTGGTCCATGCGTGACTCGTCAGGATCTCCAATCTACTCGGGCTTCAAACGGATCAACAAGAATTGGCCAGTTAAGATTCTTGAATTGAGGGCGATCGTGGAAGGGCTGAGCGTCTTACCGGCAATCCGAGCTTCGCGGCCGAACCTTTGTATCCCTCCGATTACCGTTGAATCAGACGCTTTGTGCGTGGTAAAGCTCTTGAATGGAGAAGATGATGACCTGTCAGAAGCCTCATTCTTGGTTGATGATATTGCTGAGTTGAGGAAGGTCGTGGATGAAATCTCTTTTGTTCATTGCCCGCGCGCTTGTAATGGCGATGCTCGCCTGTTGGCGCGAATTGCAGCTTTCGGGGATTTAGTTTCTCCCCTGATTTCTTTTGGTGCCTCTTCCAATTCGGAAGAGGTCTGTTTTTGTGGTTTAGGGCTTGGGCCTGATTACTCTTACTCTTTGTTTGGTACATTTGGTAGTGGTGGTTGA

mRNA sequence

ATGGTGAGCCTAAAGGGGGTTTTTCAGTCCGAAGCGCTTATCACTTGGCGTCTCAACTCCAAAACAGCAACAAGGCCTCGTCTTCAGCAGGGGAGAATTCTGTTCCCCTTTGGAGGAATTTTTGGAAGATCAAGGCCATTCCAAAGGCCAAGATCTGAAATTCGAGGAGTCGACGGTGCACGCGATATGGGACTGTTCAATTGGAGGCCTATAGACTATTGGGAGTGGATGGCTAGGAACCTAAGCAGCGGGGATTTGGAGCTGTCTATTCATCTGCTTTGGGGCATTTGGAAAAACAGAAACAATATCCTCCACAATTCAAATTTGCCCAGCCACAGTGATATCGCAAAGAATTTAAACCTCATCACTTCAGAGTGTTTAGCTTTGAAAAGTTCTAACCTGGGTGCATCTCCGGAGGTTCTTGGCAGTAGGAGGAAGAGCCAGCCGAGTCATGAGTCCTGGATGCCCTCGCCGAAAGGTTCGTGGAAATTAAATGTCGACGCCTCCTGGAATGCGCATCAGATCAAAGGAGGGGTGGGTTGGTCCATGCGTGACTCGTCAGGATCTCCAATCTACTCGGGCTTCAAACGGATCAACAAGAATTGGCCAGTTAAGATTCTTGAATTGAGGGCGATCGTGGAAGGGCTGAGCGTCTTACCGGCAATCCGAGCTTCGCGGCCGAACCTTTGTATCCCTCCGATTACCGTTGAATCAGACGCTTTGTGCGTGGTAAAGCTCTTGAATGGAGAAGATGATGACCTGTCAGAAGCCTCATTCTTGGTTGATGATATTGCTGAGTTGAGGAAGGTCGTGGATGAAATCTCTTTTGTTCATTGCCCGCGCGCTTGTAATGGCGATGCTCGCCTGTTGGCGCGAATTGCAGCTTTCGGGGATTTAGTTTCTCCCCTGATTTCTTTTGGTGCCTCTTCCAATTCGGAAGAGGTCTGTTTTTGTGGTTTAGGGCTTGGGCCTGATTACTCTTACTCTTTGTTTGGTACATTTGGTAGTGGTGGTTGA

Coding sequence (CDS)

ATGGTGAGCCTAAAGGGGGTTTTTCAGTCCGAAGCGCTTATCACTTGGCGTCTCAACTCCAAAACAGCAACAAGGCCTCGTCTTCAGCAGGGGAGAATTCTGTTCCCCTTTGGAGGAATTTTTGGAAGATCAAGGCCATTCCAAAGGCCAAGATCTGAAATTCGAGGAGTCGACGGTGCACGCGATATGGGACTGTTCAATTGGAGGCCTATAGACTATTGGGAGTGGATGGCTAGGAACCTAAGCAGCGGGGATTTGGAGCTGTCTATTCATCTGCTTTGGGGCATTTGGAAAAACAGAAACAATATCCTCCACAATTCAAATTTGCCCAGCCACAGTGATATCGCAAAGAATTTAAACCTCATCACTTCAGAGTGTTTAGCTTTGAAAAGTTCTAACCTGGGTGCATCTCCGGAGGTTCTTGGCAGTAGGAGGAAGAGCCAGCCGAGTCATGAGTCCTGGATGCCCTCGCCGAAAGGTTCGTGGAAATTAAATGTCGACGCCTCCTGGAATGCGCATCAGATCAAAGGAGGGGTGGGTTGGTCCATGCGTGACTCGTCAGGATCTCCAATCTACTCGGGCTTCAAACGGATCAACAAGAATTGGCCAGTTAAGATTCTTGAATTGAGGGCGATCGTGGAAGGGCTGAGCGTCTTACCGGCAATCCGAGCTTCGCGGCCGAACCTTTGTATCCCTCCGATTACCGTTGAATCAGACGCTTTGTGCGTGGTAAAGCTCTTGAATGGAGAAGATGATGACCTGTCAGAAGCCTCATTCTTGGTTGATGATATTGCTGAGTTGAGGAAGGTCGTGGATGAAATCTCTTTTGTTCATTGCCCGCGCGCTTGTAATGGCGATGCTCGCCTGTTGGCGCGAATTGCAGCTTTCGGGGATTTAGTTTCTCCCCTGATTTCTTTTGGTGCCTCTTCCAATTCGGAAGAGGTCTGTTTTTGTGGTTTAGGGCTTGGGCCTGATTACTCTTACTCTTTGTTTGGTACATTTGGTAGTGGTGGTTGA

Protein sequence

MVSLKGVFQSEALITWRLNSKTATRPRLQQGRILFPFGGIFGRSRPFQRPRSEIRGVDGARDMGLFNWRPIDYWEWMARNLSSGDLELSIHLLWGIWKNRNNILHNSNLPSHSDIAKNLNLITSECLALKSSNLGASPEVLGSRRKSQPSHESWMPSPKGSWKLNVDASWNAHQIKGGVGWSMRDSSGSPIYSGFKRINKNWPVKILELRAIVEGLSVLPAIRASRPNLCIPPITVESDALCVVKLLNGEDDDLSEASFLVDDIAELRKVVDEISFVHCPRACNGDARLLARIAAFGDLVSPLISFGASSNSEEVCFCGLGLGPDYSYSLFGTFGSGG
Homology
BLAST of Lag0037715 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia])

HSP 1 Score: 100.5 bits (249), Expect = 2.9e-17
Identity = 65/219 (29.68%), Postives = 107/219 (48.86%), Query Frame = 0

Query: 77  MARNLSSGDLELSIHLLWGIWKNRNNILHNSNLPSHSDIAKNLNLITSECLALKSSNLGA 136
           M    S  DL++ +   W IW +RN ++      S S + + L    +E      ++L  
Sbjct: 1   MLDKASDEDLDVLLIGSWVIWNHRNYVIFRGEHSSFSTMIQQLTKFVTESSYQSETSLSM 60

Query: 137 SPEVLGSRRKSQPSHESWMPSPKGSWKLNVDASWNAHQIKGGVGWSMRDSSGSPIYSGFK 196
             + L ++ K       W P P   W LN DASW+    +GG+GW +R   G  + +G +
Sbjct: 61  LHKTLNNKLK-------WEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNR 120

Query: 197 RINKNWPVKILELRAIVEGLSVLPAIRASRPNLCIPPITVESDALCVVKLLNGEDDDLSE 256
            +     VK+LE  AI+EGL  L  +   R      P+ +E+D+  V  LLN + +DL++
Sbjct: 121 FVEACNNVKLLEASAILEGLRNLTNLGVLR------PLHIETDSAEVESLLNRKREDLTK 180

Query: 257 ASFLVDDIAELRKVVDEISFVHCPRACNGDARLLARIAA 296
             ++V++I  LR   + ++F    R  NG A  LA+ A+
Sbjct: 181 TGWVVEEILNLRDSCEILAFAKVGRETNGCAHSLAQRAS 206

BLAST of Lag0037715 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])

HSP 1 Score: 93.6 bits (231), Expect = 3.5e-15
Identity = 70/227 (30.84%), Postives = 104/227 (45.81%), Query Frame = 0

Query: 77   MARNLSSGDLELSIHLLWGIWKNRNNILHNSNLPSHSDIAKNLNLITSECLALKSSNLGA 136
            MA+ L   DLEL + L W  W  RN  + +          + LN I S   A   S L A
Sbjct: 1163 MAKELRKSDLELMVALCWSAWYARNKCIFD---------GRELNPIISAAKA--ESVLTA 1222

Query: 137  SPEVLGSRRKSQPSH---------ESWMPSPKGSWKLNVDASWNAHQIKGGVGWSMRDSS 196
               V    RK Q SH         + W+P P+  +K+NVDA++N+  +  GVG  +RDS+
Sbjct: 1223 FQRV----RKPQQSHISISIKEKQQEWLPPPQNVFKVNVDAAFNSKNLSAGVGAVIRDSN 1282

Query: 197  GSPIYSGFKRINKNWPVKILELRAIVEGLSVLPAIRASRPNLCIPPITVESDALCVVKLL 256
            G  + +G  +        + E  A++ GL +         N  +  + +ESD L VV+L+
Sbjct: 1283 GKIVAAGVNQNLLKGSASLAEAEAVLWGLQL-------ARNADVSSLIIESDCLEVVQLV 1342

Query: 257  NGEDDDLSEASFLVDDIAELRKVVDEISFVHCPRACNGDARLLARIA 295
            N      SE  + +  I    K+  ++   H PR CN  A  LA+IA
Sbjct: 1343 NNTKGSRSEIFWTILAIQNQMKIFQKVVVNHIPRHCNACAHYLAKIA 1367

BLAST of Lag0037715 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia])

HSP 1 Score: 93.6 bits (231), Expect = 3.5e-15
Identity = 68/213 (31.92%), Postives = 101/213 (47.42%), Query Frame = 0

Query: 89  SIHLLWGIWKNRNNILHNSNLPSHSDI--AKNLNLITSECLALKSSNLGASPEVLGSRRK 148
           S+ + W IW+ RN  +     P   DI  A +  +I S            + ++   RR 
Sbjct: 12  SMIIAWQIWEMRNKSIFKGVHPETRDIQLAIDRYIINSAGRNTNLKGKSTNKDLHLIRRI 71

Query: 149 SQPSHESWMPSPKGSWKLNVDASWNAHQIKGGVGWSMRDSSGSPIYSGFKRINKNWPVKI 208
              +   W P    SWKLN +A+W A    GG+GW +RD  G  I +  + I     +  
Sbjct: 72  EDNTGAQWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCRIIRAERNITY 131

Query: 209 LELRAIVEGLSVLPAIRASRPNLCIPPITVESDALCVVKLLNGEDDDLSEASFLVDDIAE 268
           LE+ AI EGL      RA R   C  PI +ESD+L  + LL+ +  D +E  +L+++I +
Sbjct: 132 LEVMAICEGL------RAIRQEHC-RPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQ 191

Query: 269 LRKVVDEISFVHCPRACNGDARLLARIAAFGDL 300
           + K ++ +S  H  R  N  A  LAR A   DL
Sbjct: 192 MMKDMEIVSMRHISREANKVAHGLARRAMENDL 217

BLAST of Lag0037715 vs. NCBI nr
Match: XP_022148549.1 (uncharacterized protein LOC111017181 [Momordica charantia])

HSP 1 Score: 93.2 bits (230), Expect = 4.6e-15
Identity = 73/250 (29.20%), Postives = 115/250 (46.00%), Query Frame = 0

Query: 71  IDYWEWMARNLSSGDLELSIHLLWGIWKNRNNILHNSNLPSHSDIAKNLNLITSECLALK 130
           +DY++W+ R+      +  + LLW IW  RN I+H++        ++ +   T   +   
Sbjct: 1   MDYFDWIWRDSDQYKRQSGLVLLWSIWTYRNQIVHST---IEQPCSQKIRAFTESKIYEF 60

Query: 131 SSNLGASPEVLGSRRKSQPSHESWMPSPKGSWKLNVDASWNAHQIKGGVGWSMRDSSGSP 190
           ++NLG +   L    K+ P    W P  +  WKLNVDA+W      GG+GW +RDS G  
Sbjct: 61  TTNLGGN---LNMEDKNLPRTVGWTPPAQHLWKLNVDATWMDSLHAGGLGWIVRDSEGRF 120

Query: 191 IYSGFKRINKNWPVKILELRAIVEGLSVLPAIRASRPNLCIPPITVESDALCVVKLLNGE 250
           I +               L+A+ + L++   I+          I +ESD L VV ++N  
Sbjct: 121 IMAEC-------------LKALSQSLTLEAGIK----------IEMESDCLEVVNIINKS 180

Query: 251 DDDLSEASFLVDDIAELRKVVDEISFVHCPRACNGDARLLARIA-AFGDLVSPLISFGAS 310
              L+E S +V+DI +  + +    F H P   NG A  +AR A  F + V P ++    
Sbjct: 181 SMVLTEVSLIVEDIWKEMESLPIEGFKHLPMKANGVAHGIARRACVFVEHVLPYVA---- 212

Query: 311 SNSEEVCFCG 320
                VCF G
Sbjct: 241 -----VCFVG 212

BLAST of Lag0037715 vs. NCBI nr
Match: XP_015385738.1 (uncharacterized protein LOC107177034 [Citrus sinensis])

HSP 1 Score: 91.7 bits (226), Expect = 1.3e-14
Identity = 64/218 (29.36%), Postives = 97/218 (44.50%), Query Frame = 0

Query: 77  MARNLSSGDLELSIHLLWGIWKNRNNILHNSNLPSHSDIAKNLNLITSECLALKSSNLGA 136
           MA+ L+  D+E+ + + W IW  RN  L                 +      +K   L  
Sbjct: 74  MAKKLTKSDIEVMVAICWTIWYGRNKFLFEGKKMEPLLTISRAEAVVEAYRRVKQPTL-- 133

Query: 137 SPEVLGSRRKSQPSHESWMPSPKGSWKLNVDASWNAHQIKGGVGWSMRDSSGSPIYSGFK 196
            PE     + S  + + W P P  ++K+NVDA+ N  + K G+G  +RDSS     +  K
Sbjct: 134 DPEA----KYSSKNQQVWSPPPDNTFKVNVDAAVNFDRQKAGLGVVIRDSSNKVKVAAVK 193

Query: 197 RINKNWPVKILELRAIVEGLSVLPAIRASRPNLCIPPITVESDALCVVKLLNGEDDDLSE 256
                  V+  E  A+  GL V         +     I VESD   VVKL+N  +   +E
Sbjct: 194 STLFTGDVQTAEAEAVEWGLVV-------AKSAAFQCIMVESDCQEVVKLINNNEGSRTE 253

Query: 257 ASFLVDDIAELRKVVDEISFVHCPRACNGDARLLARIA 295
             +++ +I  L K    IS+ H PR+CN  A  LA++A
Sbjct: 254 IMWVISEIQSLSKDFQNISYYHTPRSCNTHAHSLAKLA 278

BLAST of Lag0037715 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-17
Identity = 65/219 (29.68%), Postives = 107/219 (48.86%), Query Frame = 0

Query: 77  MARNLSSGDLELSIHLLWGIWKNRNNILHNSNLPSHSDIAKNLNLITSECLALKSSNLGA 136
           M    S  DL++ +   W IW +RN ++      S S + + L    +E      ++L  
Sbjct: 1   MLDKASDEDLDVLLIGSWVIWNHRNYVIFRGEHSSFSTMIQQLTKFVTESSYQSETSLSM 60

Query: 137 SPEVLGSRRKSQPSHESWMPSPKGSWKLNVDASWNAHQIKGGVGWSMRDSSGSPIYSGFK 196
             + L ++ K       W P P   W LN DASW+    +GG+GW +R   G  + +G +
Sbjct: 61  LHKTLNNKLK-------WEPPPMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNR 120

Query: 197 RINKNWPVKILELRAIVEGLSVLPAIRASRPNLCIPPITVESDALCVVKLLNGEDDDLSE 256
            +     VK+LE  AI+EGL  L  +   R      P+ +E+D+  V  LLN + +DL++
Sbjct: 121 FVEACNNVKLLEASAILEGLRNLTNLGVLR------PLHIETDSAEVESLLNRKREDLTK 180

Query: 257 ASFLVDDIAELRKVVDEISFVHCPRACNGDARLLARIAA 296
             ++V++I  LR   + ++F    R  NG A  LA+ A+
Sbjct: 181 TGWVVEEILNLRDSCEILAFAKVGRETNGCAHSLAQRAS 206

BLAST of Lag0037715 vs. ExPASy TrEMBL
Match: A0A6J5XPQ2 (RNase H domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS35944 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.9e-14
Identity = 62/219 (28.31%), Postives = 107/219 (48.86%), Query Frame = 0

Query: 71  IDYWEWMARNLSSGD-----LELSIHLLWGIWKNRNNILHNSNLPSHSDIAKNLNLITSE 130
           I  W ++   ++S +     ++  +  LW IWK RN+++ +      +D A+ ++L+  +
Sbjct: 138 ISTWRYIMTMINSSEHAAEAIQWFVFGLWRIWKARNSVVFDG---VQADPAEAVHLLLQQ 197

Query: 131 CLALKSSNLGASPEVLGSRRKSQPSHESWMPSPKGSWKLNVDASWNAHQIKGGVGWSMRD 190
               + +     P+ L  +  S P  +SW   P G  K+N DA+W+A ++ GGVGW +RD
Sbjct: 198 VSEYRIAKQNLQPQPL--QPASSPVPQSWCKPPPGFLKVNCDAAWSAQRLCGGVGWVIRD 257

Query: 191 SSGSPIYSGFKRINKNWPVKILELRAIVEGLSVLPAIRASRPNLCIPPITVESDALCVVK 250
           S G  + +G +         ++EL AI   LS       +        + VESD+   + 
Sbjct: 258 SFGLLLCAGGQGDLHGSSALMMELLAIRHALSECSHFHLTN-------VIVESDSQMGIS 317

Query: 251 LLNGEDDDLSEASFLVDDIAELRKVVDEISFVHCPRACN 285
           +LNG     S+   +V DI +L   +  +SFV  PR+CN
Sbjct: 318 MLNGRVTVDSDLEGIVFDIQQLVASLSRVSFVFAPRSCN 344

BLAST of Lag0037715 vs. ExPASy TrEMBL
Match: A0A6J5WPU6 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS20372 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.9e-14
Identity = 77/269 (28.62%), Postives = 121/269 (44.98%), Query Frame = 0

Query: 30  QGRILF--PFGGIFGRSRPFQRPRSEIRGVDGARDMGLFNWRPIDYWEWMARNLSSGD-- 89
           Q  I F   F   F  + P Q   S++ G D            I  W+ M   L+S +  
Sbjct: 681 QAHIFFECDFARAFWFASPLQLDVSKLAGEDF-----------ISTWQHMMTTLNSSEHA 740

Query: 90  ---LELSIHLLWGIWKNRNNILHNSNLPSHSDIAKNLNLITSECLALKSSNLGASPEVLG 149
              ++  +  LW IWK RN  + +      +D  + + L+  +    +++     P+ L 
Sbjct: 741 AEAIQWFVFGLWRIWKARNLAVFDG---VQADPTEAVLLLLKQVSEFRTAKQDLQPQPL- 800

Query: 150 SRRKSQPSHESWMPSPKGSWKLNVDASWNAHQIKGGVGWSMRDSSGSPIYSGFKRINKNW 209
            +  S P+  SW   P G  K+N DA+W+A ++ GGVGW +RDS G  + +G +      
Sbjct: 801 -QPVSSPAPLSWCKPPPGLLKVNCDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGS 860

Query: 210 PVKILELRAIVEGLSVLPAIRASRPNLCIPPITVESDALCVVKLLNGEDDDLSEASFLVD 269
              ++EL AI   LS          N  +  I VESD+   + +LNG     S+   +V 
Sbjct: 861 SAIMMELLAIRHALS-------ECANFHLTDIIVESDSQKGILMLNGRATVDSDLEGIVF 920

Query: 270 DIAELRKVVDEISFVHCPRACNGDARLLA 292
           DI +L   +  +SFV  PR+CN  A  +A
Sbjct: 921 DIRQLVASLSRVSFVFAPRSCNQAAHSVA 926

BLAST of Lag0037715 vs. ExPASy TrEMBL
Match: A0A6J5UE59 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23353 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.2e-14
Identity = 79/273 (28.94%), Postives = 119/273 (43.59%), Query Frame = 0

Query: 30   QGRILF--PFGGIFGRSRPFQRPRSEIRGVDGARDMGLFNWRPIDYWEWMARNLSSGD-- 89
            Q  I F   F   F  + P Q   S++ G D            I  W+ M   L+S +  
Sbjct: 1009 QAHIFFECDFARAFWFASPLQLDVSKLAGEDF-----------ISTWQHMMTTLNSSEHA 1068

Query: 90   ---LELSIHLLWGIWKNRNNILHNSNLPSHSDIAKNLNLITSECLALKSSNLGASPEVLG 149
               ++  +  LW IWK RN  + +      +++   L    SE    K       P+ L 
Sbjct: 1069 AEAIQWFVFGLWRIWKARNLAVFDGVQADPTEVVLLLLKQVSEFRTAKHDLQDLQPQPL- 1128

Query: 150  SRRKSQPSHESWMPSPKGSWKLNVDASWNAHQIKGGVGWSMRDSSGSPIYSGFKRINKNW 209
             +  S P+  SW     G  K+N DA+W+A ++ GGVGW +RDS G  + +G +      
Sbjct: 1129 -QPASSPAPLSWCKPSLGLLKVNCDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGS 1188

Query: 210  PVKILELRAIVEGLSVLPAIRASRPNLCIPPITVESDALCVVKLLNGEDDDLSEASFLVD 269
               ++EL AI   LS          N  +  I VESD+   + +LNG     S+   +V 
Sbjct: 1189 SAIMMELLAIRHALS-------ECANFHLTDIIVESDSQKGILMLNGRATVDSDLEGIVF 1248

Query: 270  DIAELRKVVDEISFVHCPRACNGDARLLARIAA 296
            DI +L   +  +SFV  PR+CN  A  +A  A+
Sbjct: 1249 DIRQLVASLSRVSFVFAPRSCNQAAHSVAGFAS 1261

BLAST of Lag0037715 vs. ExPASy TrEMBL
Match: A0A6J5UF50 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23354 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.2e-14
Identity = 79/273 (28.94%), Postives = 119/273 (43.59%), Query Frame = 0

Query: 30  QGRILF--PFGGIFGRSRPFQRPRSEIRGVDGARDMGLFNWRPIDYWEWMARNLSSGD-- 89
           Q  I F   F   F  + P Q   S++ G D            I  W+ M   L+S +  
Sbjct: 141 QAHIFFECDFARAFWFASPLQLDVSKLAGEDF-----------ISTWQHMMTTLNSSEHA 200

Query: 90  ---LELSIHLLWGIWKNRNNILHNSNLPSHSDIAKNLNLITSECLALKSSNLGASPEVLG 149
              ++  +  LW IWK RN  + +      +++   L    SE    K       P+ L 
Sbjct: 201 AEAIQWFVFGLWRIWKARNLAVFDGVQADPTEVVLLLLKQVSEFRTAKHDLQDLQPQPL- 260

Query: 150 SRRKSQPSHESWMPSPKGSWKLNVDASWNAHQIKGGVGWSMRDSSGSPIYSGFKRINKNW 209
            +  S P+  SW     G  K+N DA+W+A ++ GGVGW +RDS G  + +G +      
Sbjct: 261 -QPASSPAPLSWCKPSLGLLKVNCDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGS 320

Query: 210 PVKILELRAIVEGLSVLPAIRASRPNLCIPPITVESDALCVVKLLNGEDDDLSEASFLVD 269
              ++EL AI   LS          N  +  I VESD+   + +LNG     S+   +V 
Sbjct: 321 SAIMMELLAIRHALS-------ECANFHLTDIIVESDSQKGILMLNGRATVDSDLEGIVF 380

Query: 270 DIAELRKVVDEISFVHCPRACNGDARLLARIAA 296
           DI +L   +  +SFV  PR+CN  A  +A  A+
Sbjct: 381 DIRQLVASLSRVSFVFAPRSCNQAAHSVAGFAS 393

BLAST of Lag0037715 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 5.6e-11
Identity = 57/227 (25.11%), Postives = 98/227 (43.17%), Query Frame = 0

Query: 73  YWEWMARNLSSGD------LELSIHLLWGIWKNRNNILHNSNLPSHSDIAKNLNLITSEC 132
           YW +   NL +G+       +L   LLW +WKNRN ++      +  ++ +       E 
Sbjct: 341 YWVF---NLGNGNPQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEW 400

Query: 133 -LALKSSNLGASPEVLGSRRKSQPSHESWMPSPKGSWKLNVDASWNAHQIKGGVGWSMRD 192
            +  ++ + G  P+V      ++ S   W P P    K N DA+WN    + G+GW +R+
Sbjct: 401 RIRTEAESCGTKPQV------NRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRN 460

Query: 193 SSGSPIYSGFKRINKNWPVKILELRAIVEGLSVLPAIRASRPNLCIPPITVESDALCVVK 252
             G   + G + + K   V   EL A+   +  L   + +        +  ESD+  +++
Sbjct: 461 EKGEVKWMGARALPKLKSVLEAELEAMRWAVLSLSRFQYNY-------VIFESDSQVLIE 520

Query: 253 LLNGEDDDLSEASFLVDDIAELRKVVDEISFVHCPRACNGDARLLAR 293
           +LN  D+        + D+  L     E+ FV  PR  N  A  +AR
Sbjct: 521 ILN-NDEIWPSLKPTIQDLQRLLSQFTEVKFVFIPREGNTLAERVAR 550

BLAST of Lag0037715 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 3.1e-09
Identity = 53/202 (26.24%), Postives = 83/202 (41.09%), Query Frame = 0

Query: 92  LLWGIWKNRNNILHNSNLPSHSDIAKNLNLITSECLALKSSNLGAS-PEVLGSRRKSQPS 151
           LLW +WK+RN ++         ++ +       E    +     AS P+V       +  
Sbjct: 80  LLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRELEGKASGPQV------ERNL 139

Query: 152 HESWMPSPKGSWKLNVDASWNAHQIKGGVGWSMRDSSGSPIYSGFKRINKNWPVKILELR 211
              W   P    K N DA+W     + G+GW +R+ SG  ++ G + + +   V   EL 
Sbjct: 140 SVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAELE 199

Query: 212 AIVEGLSVLPAIRASRPNLCIPPITVESDALCVVKLLNGEDDDLSEASFLVDDIAELRKV 271
           A+   +  +      R       I  ESDA  +V LLN  DD        ++DI +L   
Sbjct: 200 ALRWAVLTMSRFNYKR-------IIFESDAQALVNLLN-SDDFWPTLQPALEDIQQLLHH 259

Query: 272 VDEISFVHCPRACNGDARLLAR 293
            +E+ F   PR  N  A  +AR
Sbjct: 260 FEEVKFEFTPRGGNKVADRIAR 267

BLAST of Lag0037715 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 50.1 bits (118), Expect = 4.2e-06
Identity = 49/203 (24.14%), Postives = 79/203 (38.92%), Query Frame = 0

Query: 92  LLWGIWKNRNNILHNSNLPSHSDIAKNLNLITSECLALKSSNLGASPEVLGSRRKSQPSH 151
           L+W IWK+ N+++ N          +     T E L     N   + +  G+R      +
Sbjct: 47  LMWRIWKSGNDLVFNHTRTKFQTTVEMALNDTKEWL----DNTMTNEQQNGNRNADPSRN 106

Query: 152 ESWMPSPKGSWKLNVDASWNAHQIKGGVGWSMRDSSGSPIYSGFKRINKNWPVKILELRA 211
             W P  +   K N DAS +      G+GW +R+S G+ I  G  +       +  E   
Sbjct: 107 TKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECST 166

Query: 212 IVEGLSVLPAIRASRPNLCIPPITVESDALCVVKLLNGEDDDLSEASFLVDDIAELRKVV 271
           ++       AI+AS        +  E D   + +++N +  +     FL D I       
Sbjct: 167 LIW------AIQASY-GFGHKKVIFEGDNQTITRMINTKSSNPRLQHFL-DTIQSWIPSF 226

Query: 272 DEISFVHCPRACNGDARLLARIA 295
           + I F    R  NG A  LA+ A
Sbjct: 227 ESIEFSFKHREQNGCADFLAKQA 237

BLAST of Lag0037715 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 9.3e-06
Identity = 54/206 (26.21%), Postives = 86/206 (41.75%), Query Frame = 0

Query: 88  LSIHLLWGIWKNRNNILHNSNLPSHSDIAKNLNLITSECL-ALKSSNLGASPEVLGSRRK 147
           L + L+W IWK RNN++ N    S S    +    T + L A +S     SP      R+
Sbjct: 264 LPVWLIWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSP-----TRQ 323

Query: 148 SQPSHESWMPSPKGSWKLNVDASWNAHQIKGGVGWSMRDSSGSPIYSGFKRINKNWPVKI 207
              +   W   P    K N DA ++  +++   GW +R+  G+PI  G  ++        
Sbjct: 324 IAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLE 383

Query: 208 LELRAIVEGLSVLPAIRASRPNLCIPPITVESDALCVVKLLNGEDDDLSEASFLVDDIAE 267
            E +A++  L     IR          + +E D   ++ L+NG     S A+ L +DI+ 
Sbjct: 384 AETKALLAALQ-QTWIRG------YTQVFMEGDCQTLINLINGISFHSSLANHL-EDISF 443

Query: 268 LRKVVDEISFVHCPRACNGDARLLAR 293
                  I F    R  N  A +LA+
Sbjct: 444 WANKFASIQFGFIRRKGNKLAHVLAK 456

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022155262.12.9e-1729.68uncharacterized protein LOC111022403 [Momordica charantia][more]
XP_024950112.13.5e-1530.84uncharacterized protein LOC112496847 [Citrus sinensis][more]
XP_022143535.13.5e-1531.92uncharacterized protein LOC111013412 [Momordica charantia][more]
XP_022148549.14.6e-1529.20uncharacterized protein LOC111017181 [Momordica charantia][more]
XP_015385738.11.3e-1429.36uncharacterized protein LOC107177034 [Citrus sinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DNV91.4e-1729.68uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J5XPQ21.9e-1428.31RNase H domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCU... [more]
A0A6J5WPU61.9e-1428.62Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=... [more]
A0A6J5UE594.2e-1428.94Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=... [more]
A0A6J5UF504.2e-1428.94Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23354 PE=4 S... [more]
Match NameE-valueIdentityDescription
AT4G29090.15.6e-1125.11Ribonuclease H-like superfamily protein [more]
AT2G34320.13.1e-0926.24Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT5G65005.14.2e-0624.14Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT3G09510.19.3e-0626.21Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 160..295
e-value: 2.6E-12
score: 48.9
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 165..292
e-value: 2.2E-16
score: 59.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..159
NoneNo IPR availablePANTHERPTHR33033POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 152..294
NoneNo IPR availablePANTHERPTHR33033:SF67SUBFAMILY NOT NAMEDcoord: 152..294
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 164..292
e-value: 1.39733E-14
score: 67.3392
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 161..296

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0037715.1Lag0037715.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity