Lag0037655 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0037655
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Alpha/beta-Hydrolases superfamily protein
Location	chr2: 8064668 .. 8066444 (+)
RNA-Seq Expression	Lag0037655
Synteny	Lag0037655

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCGAATTTCATCACTGCATTTCATTGCCCAAATCCACACTCCTCTTCTTCTTCTTCTTCAAATCTGCAGCAGAACAAATCGCTCCTTTTGAAGTTTCATTCTCGTTGTTCATCTTCTTCGAGAAAATTCGCTGTTTCGGAGGGCGCCGAGGGTAGAATTACAGAAGAGGAATTTCTCATTTCGTCTTCTTCTGGTATGCATTAATTCACTGCTTTTCTTTCTTTATCGCGTATTAGTTTGCTGTTCTTTCTATCATCTTACTGTGAGTGGGTTGGTTCTTAGCTGTGTAAATCCTATAGTTTAAGGCCCTCTTCAATGGAAGAATCCTATTAGTAGATCTGAACGATTGAGATTTTAAATTCCTTTTGCGAATATATGACGAAGGGAATAGACATTATGGTGCCCTTTTTGCTATGGGAGGGGGATCCAATTCCAATCCAAGTGGGCTATCTATATAAGTTAATAAAGTAAAGATAATTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGGTTAAATTCATTTCTAGTTTCTATGCTTTAACGTAACATGATTCTAATTTAGTTCTCATGCTTATAGAAATTTCATTATTTTTCCTATTATTTTAATATCTTAGATAGGTGGTCACTACGAGATTTGAACTTAATCCTTCAAAGTCATTATGGTTCTGTTTTCTTTGAGTAAATGTTATCAGACACTTGTTATTACCAAGGAATAGCAGAAAAAACCCAATATATCGAGCTGTTTGTTGTTTTTTTTTTGACAACATGTGAGGGTGGAGGGATTCGAACTATAGACCTCTTGGTCATTAGTACAAGATTTATGTCGGTAGAGCTAAGCTCATGTTGGCAGCTATATGTAGTTGCACTTGAAAAAGAATCACAAAAATTCAATGGACAATATCCCTTGTACTCCAGAACAACATTAGTTGAAGCCATTTTTATACTTTGAAATCAAAATGATGCCTTAAAATCCAACCGAAATTTATGTCTTCAATCAATTTTATGTATCACACTCTCACATAATTAAAACAAAATATTATATCGTAGAGTTGATTTCCAATATTTATAAACAATCTTCATATATATGCACCTATTGTAACGTTTAAGCAAAGAATAAGGGAAGAATGTGAAAATTTTAGAGGTATGGAAATCAAATTGAAACCAAGGTTAGAGCAGATTATTAGAAGTGTAATTTAACGTACTTGTTTAAATATTTTTTCTTTATACAGTACTAAAAGATTATCGTTATTTTTCTTTTAACTGTAAAGGATCATCTTCTTCTGCACGCACACAGCTTGATCTCTTGGAGCAACTCTCTTCTGGCAGCCAATTTGTTGATGGTAAGCGATCTGACTCTCTTTCCTCTAAACAAGCTAACAGAATGGGAATGGAAAAGAAAGGCATCAGCTTTCTTTCATTGAAAGAGGTCACATTTCACTTGAACTTACTAAGACTTTATGTTCTCAGGTTATGAGAGTGATGGCAGTTACCAGAAAATTACGATACGTGATCAGCTTGCACAATTGTTCAGAGACAGAGACGACGATTTTAGCGTTCCATTGGGTAAGAACTTGAAGAAGGTTAGTGCCAAGTTTTTGACAATTTCTCAGAAGAGGAATATCAAAAGACAAGCATACTTGAATGAAGTATCTCAGAGGAACGATTCAGTTTTCTTCGCTACAGTTGGAGCATTTGTAATTCTGCCACCTATTGTAATATTGGGAATTGCTATACTAACTGGTTATGTGCAACTTTTTCCATGA

mRNA sequence

ATGGCCTCGAATTTCATCACTGCATTTCATTGCCCAAATCCACACTCCTCTTCTTCTTCTTCTTCAAATCTGCAGCAGAACAAATCGCTCCTTTTGAAGTTTCATTCTCGTTGTTCATCTTCTTCGAGAAAATTCGCTGTTTCGGAGGGCGCCGAGGGTAGAATTACAGAAGAGGAATTTCTCATTTCGTCTTCTTCTGGATCATCTTCTTCTGCACGCACACAGCTTGATCTCTTGGAGCAACTCTCTTCTGGCAGCCAATTTGTTGATGGTTATGAGAGTGATGGCAGTTACCAGAAAATTACGATACGTGATCAGCTTGCACAATTGTTCAGAGACAGAGACGACGATTTTAGCGTTCCATTGGGTAAGAACTTGAAGAAGGTTAGTGCCAAGTTTTTGACAATTTCTCAGAAGAGGAATATCAAAAGACAAGCATACTTGAATGAAGTATCTCAGAGGAACGATTCAGTTTTCTTCGCTACAGTTGGAGCATTTGTAATTCTGCCACCTATTGTAATATTGGGAATTGCTATACTAACTGGTTATGTGCAACTTTTTCCATGA

Coding sequence (CDS)

ATGGCCTCGAATTTCATCACTGCATTTCATTGCCCAAATCCACACTCCTCTTCTTCTTCTTCTTCAAATCTGCAGCAGAACAAATCGCTCCTTTTGAAGTTTCATTCTCGTTGTTCATCTTCTTCGAGAAAATTCGCTGTTTCGGAGGGCGCCGAGGGTAGAATTACAGAAGAGGAATTTCTCATTTCGTCTTCTTCTGGATCATCTTCTTCTGCACGCACACAGCTTGATCTCTTGGAGCAACTCTCTTCTGGCAGCCAATTTGTTGATGGTTATGAGAGTGATGGCAGTTACCAGAAAATTACGATACGTGATCAGCTTGCACAATTGTTCAGAGACAGAGACGACGATTTTAGCGTTCCATTGGGTAAGAACTTGAAGAAGGTTAGTGCCAAGTTTTTGACAATTTCTCAGAAGAGGAATATCAAAAGACAAGCATACTTGAATGAAGTATCTCAGAGGAACGATTCAGTTTTCTTCGCTACAGTTGGAGCATTTGTAATTCTGCCACCTATTGTAATATTGGGAATTGCTATACTAACTGGTTATGTGCAACTTTTTCCATGA

Protein sequence

MASNFITAFHCPNPHSSSSSSSNLQQNKSLLLKFHSRCSSSSRKFAVSEGAEGRITEEEFLISSSSGSSSSARTQLDLLEQLSSGSQFVDGYESDGSYQKITIRDQLAQLFRDRDDDFSVPLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVILPPIVILGIAILTGYVQLFP

Homology

[Close]

BLAST of Lag0037655 vs. NCBI nr
Match: XP_022981115.1 (uncharacterized protein LOC111480359 [Cucurbita maxima])

HSP 1 Score: 326.2 bits (835), Expect = 1.8e-85
Identity = 174/188 (92.55%), Postives = 179/188 (95.21%), Query Frame = 0


Query: 1   MASNFITAFHCPNPHSSSSSSSNLQQNKSLLLKFHSRCSSSSRKFAVSEGAEGRITEEEF 60
           MASNFITAFHCPNPHSSSSS SNLQQN  LLLKFHSRCSSSSRKFAVSEGAEGR+ +EE 
Sbjct: 1   MASNFITAFHCPNPHSSSSSYSNLQQNTVLLLKFHSRCSSSSRKFAVSEGAEGRVQDEEL 60

Query: 61  LISSSSGSSSSARTQLDLLEQLSSGSQFVDGYESDGSYQKITIRDQLAQLFRDRDDDFSV 120
            ISSSSG+SSSARTQLDLLEQLSSGSQ VDGYESDG+YQK TIRDQLAQLFRDRDDDFS+
Sbjct: 61  FISSSSGASSSARTQLDLLEQLSSGSQLVDGYESDGNYQKTTIRDQLAQLFRDRDDDFSI 120

Query: 121 PLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVILPPIVILGIAIL 180
           PLGKNLKKVSAKFLTISQKRNIKRQ YLNEVSQRNDSVFFATVGAFVILPPIVILGIAIL
Sbjct: 121 PLGKNLKKVSAKFLTISQKRNIKRQEYLNEVSQRNDSVFFATVGAFVILPPIVILGIAIL 180

Query: 181 TGYVQLFP 189
           TGYVQLFP
Sbjct: 181 TGYVQLFP 188

[Close]

BLAST of Lag0037655 vs. NCBI nr
Match: XP_023523373.1 (uncharacterized protein LOC111787590 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.9 bits (829), Expect = 8.9e-85
Identity = 174/189 (92.06%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 1   MASNFITAFHCPNPHSSSSSS-SNLQQNKSLLLKFHSRCSSSSRKFAVSEGAEGRITEEE 60
           MASNFITAFHCPNPH SSSSS SNLQQN SL+LKFHSRCSSSSRKFAVSEGAEGR+ +EE
Sbjct: 1   MASNFITAFHCPNPHPSSSSSYSNLQQNTSLILKFHSRCSSSSRKFAVSEGAEGRVQDEE 60

Query: 61  FLISSSSGSSSSARTQLDLLEQLSSGSQFVDGYESDGSYQKITIRDQLAQLFRDRDDDFS 120
            LISSSSG+SSSARTQLDLLEQLSSGSQ VDGYESDG+YQ+ TIRDQLAQLFRDRDDDFS
Sbjct: 61  LLISSSSGASSSARTQLDLLEQLSSGSQLVDGYESDGNYQRTTIRDQLAQLFRDRDDDFS 120

Query: 121 VPLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVILPPIVILGIAI 180
           +PLGKNLKKVSAKFLTISQKRNIKRQ YLNEVSQRNDSVFFATVGAFVILPPIVILGIAI
Sbjct: 121 IPLGKNLKKVSAKFLTISQKRNIKRQEYLNEVSQRNDSVFFATVGAFVILPPIVILGIAI 180

Query: 181 LTGYVQLFP 189
           LTGYVQLFP
Sbjct: 181 LTGYVQLFP 189

[Close]

BLAST of Lag0037655 vs. NCBI nr
Match: XP_004144634.2 (uncharacterized protein LOC101216249 [Cucumis sativus] >KGN54932.1 hypothetical protein Csa_012061 [Cucumis sativus])

HSP 1 Score: 316.2 bits (809), Expect = 1.9e-82
Identity = 174/190 (91.58%), Postives = 176/190 (92.63%), Query Frame = 0


Query: 1   MASNFITAFHCPNPH--SSSSSSSNLQQNKSLLLKFHSRCSSSSRKFAVSEGAEGRITEE 60
           MASNFI  FHC NPH  SSSSSSSNL  NKSL  KFHSRCSSSSRKFAVSE AEGR+ EE
Sbjct: 1   MASNFIIGFHCSNPHFSSSSSSSSNLLHNKSLPFKFHSRCSSSSRKFAVSESAEGRVNEE 60

Query: 61  EFLISSSSGSSSSARTQLDLLEQLSSGSQFVDGYESDGSYQKITIRDQLAQLFRDRDDDF 120
           EFLISSSSGSSSSARTQLDLLEQLSSGSQ VDGYESDGSY K TIRDQLAQLFRDRDDDF
Sbjct: 61  EFLISSSSGSSSSARTQLDLLEQLSSGSQLVDGYESDGSYGKTTIRDQLAQLFRDRDDDF 120

Query: 121 SVPLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVILPPIVILGIA 180
           +VPLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVILPPIVILGIA
Sbjct: 121 TVPLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVILPPIVILGIA 180

Query: 181 ILTGYVQLFP 189
           ILTGYVQLFP
Sbjct: 181 ILTGYVQLFP 190

[Close]

BLAST of Lag0037655 vs. NCBI nr
Match: XP_038897096.1 (suppressor protein SRP40 [Benincasa hispida])

HSP 1 Score: 315.8 bits (808), Expect = 2.4e-82
Identity = 176/200 (88.00%), Postives = 179/200 (89.50%), Query Frame = 0


Query: 1   MASNFITAFHCPNPH------------SSSSSSSNLQQNKSLLLKFHSRCSSSSRKFAVS 60
           MASNFI  FH PNPH            SSSSSSSNL QNKS  LKFHSRCSSSSRKFAVS
Sbjct: 1   MASNFILGFHYPNPHFSSSSSSSSSSSSSSSSSSNLLQNKSPPLKFHSRCSSSSRKFAVS 60

Query: 61  EGAEGRITEEEFLISSSSGSSSSARTQLDLLEQLSSGSQFVDGYESDGSYQKITIRDQLA 120
           EGAEGR+ +EE LISSSSGSSSSARTQLDLLEQLSSGSQ VDGYESDGSYQKITIRDQLA
Sbjct: 61  EGAEGRVKDEELLISSSSGSSSSARTQLDLLEQLSSGSQLVDGYESDGSYQKITIRDQLA 120

Query: 121 QLFRDRDDDFSVPLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVI 180
           QLFRDRDDDFS+PLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVI
Sbjct: 121 QLFRDRDDDFSIPLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVI 180

Query: 181 LPPIVILGIAILTGYVQLFP 189
           LPPIVILGIAILTGYVQLFP
Sbjct: 181 LPPIVILGIAILTGYVQLFP 200

[Close]

BLAST of Lag0037655 vs. NCBI nr
Match: KAG7037491.1 (hypothetical protein SDJN02_01118 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 314.7 bits (805), Expect = 5.4e-82
Identity = 173/192 (90.10%), Postives = 180/192 (93.75%), Query Frame = 0


Query: 1   MASNFITAFHCPNPHSSSSSS---SNLQQNKSLLLKFHSRC-SSSSRKFAVSEGAEGRIT 60
           MASN ITAFHCPNP+ SSSSS   SNLQQN SLLLKFHSRC SSSSRKFAVSEGAEGR+ 
Sbjct: 1   MASNLITAFHCPNPYPSSSSSSSYSNLQQNTSLLLKFHSRCSSSSSRKFAVSEGAEGRVQ 60

Query: 61  EEEFLISSSSGSSSSARTQLDLLEQLSSGSQFVDGYESDGSYQKITIRDQLAQLFRDRDD 120
           +EE LISSSSG+SSSARTQLDLLEQLSSGSQ VDGYESDG+YQ+ TIRDQLAQLFRDRDD
Sbjct: 61  DEELLISSSSGASSSARTQLDLLEQLSSGSQLVDGYESDGNYQRTTIRDQLAQLFRDRDD 120

Query: 121 DFSVPLGKNLKKVSAKFLTISQKRNIKRQAYLNEVSQRNDSVFFATVGAFVILPPIVILG 180
           DFS+PLGKNLKKVSAKFLTISQKRNIKRQ YLNEVSQRNDSVFFATVGAFVILPPIVILG
Sbjct: 121 DFSIPLGKNLKKVSAKFLTISQKRNIKRQEYLNEVSQRNDSVFFATVGAFVILPPIVILG 180

Query: 181 IAILTGYVQLFP 189
           IAILTGYVQLFP
Sbjct: 181 IAILTGYVQLFP 192

The following BLAST results are available for this feature:

BLAST of Lag0037655 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022981115.1	1.8e-85	92.55	uncharacterized protein LOC111480359 [Cucurbita maxima]	[more]
XP_023523373.1	8.9e-85	92.06	uncharacterized protein LOC111787590 [Cucurbita pepo subsp. pepo]	[more]
XP_004144634.2	1.9e-82	91.58	uncharacterized protein LOC101216249 [Cucumis sativus] >KGN54932.1 hypothetical ...	[more]
XP_038897096.1	2.4e-82	88.00	suppressor protein SRP40 [Benincasa hispida]	[more]
KAG7037491.1	5.4e-82	90.10	hypothetical protein SDJN02_01118 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Lag0037655 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36742	MYOSIN-G HEAVY CHAIN-LIKE PROTEIN	coord: 1..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0037655.1	Lag0037655.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane