Lag0037652 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0037652
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	serine/arginine-rich splicing factor SR45
Location	chr2: 8046115 .. 8053634 (+)
RNA-Seq Expression	Lag0037652
Synteny	Lag0037652

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAACCAAGCAGAGGCCGTCGCTCGCCGCCGTCGGGATCGGGATCCTCCTCGCGTTCACGCTCTTACTCCGGCTCTGACTCCCGTTCCAGTTCCCGCTCGCGCTCCAGGTCGCGGTCTGTATCTGTATCCCGTTCTCGCTCCCGTTCCAGGTCCATTTCCTCGTCTTCGTCTCCCTCTCGTAGCGCTAGTTCTCGGAGCCGAAGCCCCCCTCCCCAGAGAAAGAGGTTTGTCTTTCATTTGAGCTTGCATTTTTCGTTTTGGGGTCTTACATTTGGTGGCTTATTGGTTGTTAGTGCGAGGGGAAGTACCAGAATTAGGCATTTTGTGCTTGGGAGTTGGGTGGATTATGCATTACCCTTTTGTCGCCGTTGCTTGGATTTTCTTGTATTTATTCGAAGTCGCATTTTAGAATCTTCAGTTTATGGAGAAGCAGACGCACATCTGTTTCTGGCATTTCATATGCCAAATGTTTATTGTTTTTAAGTGGTCGTTGTACATCGAAATCACATCTTCATTTCTCGTTCTTTTGAATTGGAGTCCTTTTATAGGACTTGTATTCATATCCCTGTATTCTTTCATTTGTTCCATGAATGTTTAGTTTCTTTTATTGATAATAAACATCAAGAAGGATATATTCCAAACAAAGGGAAGGCAATACACCTTAGGGGTCAAGGTGGAGATCTTCCGCTCCCAAAAAACTATCAGAAGACTATCTCAAAAAGCCTGCTAATCAATAGACTATAGTTACAAAAGAACTTATTGTGTAAAGTAATTCACCGAGAGAAAAAATCACATATTTACTTGTTCGTTGTCGATTTGTTTTTCAGTCCGACAGAAACAGCTCGGCGGGCTCGCGCTTCACCTCCACCGGCTAAACGAAGTTCTCCTCCACCCAGGTAATAACATCTTCATCTACAGTCATTTTTTTGTTATCATCTATCAACAATTAATCCTTCATTATTTGTTCATGGCATGCATTTTCCGACAAGTCGAACATTTTTGCTTTGGTGTGGTTGTTGATGCCTGCCATTTGATAAAAACTTCTGATCCTCTTCGATGATTGTCTTTGTGCTGTTTGTTTACTAAGTTGTTTGTAAGTTATGGATGGCTAGCGAACAGTTTCAAGTATTTCATTTATCTGTGTGCAACTATGATGCCTCGTTTTGGACGTATGGTCAAGGAATAAATACTACCTACCGTTTTTTAAAGTTAATTATGGTTTACCATGTTATTTGTAATTTTATTTTAAGAAAGCTCATTCTCCCTTGTCATTTAGTTTGTTAAAACATGGTTTGATTTTAGAGAGGATGAGTTCAATCCATGATGAACACCTACCTAATTTAATATCCTACGTGTTTCTTGGCAACCAAATGTAGTAGGGTCAAGCGATTGTCTCGTGAGATTATTTGAAGTGTGTGCAAGCTGGTCCGGACACTCACGGATATTTGTTTTAAATTCATTAACCATTTTCTTAAACAGAAAAAAAAAACCATGAGGAAAATTTTGTTTGTAATTATTTGAATTCAGTACTTTTTCAGAACTGTGGTGTAACTATTGCATTATTTTCAACTTTTAATCATTTTATGCTTGTTGAAGTCCAACGTGACAAACAATGTTATATTAGCATTAATTATCAGGTAACTGTAAATTTTATCTTTAGTACTCTATGATGACTTGCAAATTTTATGTAATTGACTATTTAGAAATTGTCATATGCATTTTGTTTATACCAGTATTTCCTTTAGTCATGCTTTTGTAAATCAACGATTTATGTCCATTGCTTTCTTTTTGTGATATTTTCCTTGTCTGTCAGTCATACATTTATATATTTTGTTTTTCAAACTGTCTTTTGATTTCAGGAAACCATCTCCTGTACGCGAGTCACTTGTTCTTCACATCGATGCACTGAGTAGGAATGTCCATGAGGGTCATTTAAGAGAAATCTTCAGTATGGTCTTTCACTCGCTTTCTTTAGCTTTTAAACAATTATTCTGATGAGTATATGCACTTTTGTTTTGATATCATTATTTTTTAAACGTTACATATTGAATACATTGATTAAAGCCAAAGAGTAAGAAAAAGCAACTTTTATTTCGAGCTTCAACCACATCATCTGAAAGATATACCACTGACTTTGTGAACTGTCTTGTCTTATAAGAAAAAAAAGTTGGTATATTTGTGTAAACCTATGATGTAATTATGTGGTAGATTCTATTCAACATAGCCTGTTTGTTGGTAATGATCATTGACCAGGTTGTTTTGTCAATGACAATTGAGTAATTTGTCATATCAATTACTCTTCATCACGTCTGTTTTGTTAAGTTACTGTATGCACGTTCCTTCCTTTCCTCTTAACTGTTCTTAAATTATGGATGGTTCCTTTTCATGAATATATTTCATCTAATTAGTTGCAAATTTATTAGTCTCATTTAATCAAAAGGGTCACCGTCAAATATGAATTTTCCTCCAAAAATCTCTTTATGGTTATGCTTGATGCTTAGTGGATTGAATAGGTAATCTGTTAGCCTTTTTCTTTGATTATCTTTTAGAATTATTTTTGCAGCTCTTATGGATTTCCTTCTTTTTTGGATACCCTCTAGGTAATTTTGGTGAAGTAGTCAATGTTGAGCTGGCAATGGATCGCACAGTGAGTTTGTACCATGCATATTGTATTTGAAGAACTTTTTCTTGAATAATATATTGATGCATCTGTTTTATTGCTTATAGGTCAACCTTCCTAAAGGATATGGATATGTTGAATTCAAAACGAGATCTGATGCTGAAAAAGCCCAAGTGTATATGGATGGTGTAGGTTTTGCTTAAATGTTCAAGTACTTCAAGTGCATCTATTGATAGTATCACATAACTGGGGAATGACTGTGATGATTGGCTAAATGTAGGCCCAAATTGATGGAAATGTTATTCGAGCAAGATTTACATTGCCTCAAAGACAGAAGATGCCTACACCTCCAAGGACTGTAGCAACTGCTCCAAAGAGAGATGGCCCTAAGCCTGAAAATGTTGGCGCTGATGCCGAGAAGGATGACATGAAAAGACAGAGAGAACGTATAACTCTCAATAATTATATATTTTCCAATGTCCACATGTTTTGCCTAATATTATATTTTACTTTTCATGAGAGTATATTCTTTTAGTAATTTATTTCTATTTGTTACATCAGCTTCACCTCGTCGAAAGCCTCCTTCTCCTAGAAGGCGCTCACCTGTTGCTCGACGAGGTGGGTCTCCTAGAAGACAAGCTGATTCTCCACGCCGTCGTCCGGACTCTCCTCCACGTCGCCGCTTAGAATCTCCTTTCCGTCGCGATTCTCCTCCTAGGAGGAGGCCTGCATCACCAATGAGAGGTGGCCGTTCTCCATCACCTTTGGCTAGGCGACATAGATCTCCTCCAAGGTTGACTATCATCCCCCCCTCTCGTCAGCCTCATACACACACAAAAACACATAAAATCTATCTCCTTTTCTTTAAATAGCAGGAGCATCAACATTGTTTAACTTTGGTTTATTAGGCCCTCTCCAAGAAGAATTCGTGGCAGTCCTGTTCGAAGACGTTCACCACCTCCTCCTAGGCGCCGGTATTATGCATTTGACTATTTTGAAAGATCTCAGTAGTCTTTTCTCTTGCAATTGGAATGATACACAGTTGTTAATTGTTTCTAACCTCTCAATTATATCATATATCATATATGTCATACAATATAGTAAGAAGGTTGTTTCCTATCAAAAAAAAAAAAATATATATATATATATAGTAAGAAGGTTGACTAAATGCCTTGCTACACATGTTAAGTTGAATCTTATTGTTTCCGAGTTTGAGTATTTGTCTTGAGTGTAGTGAATTATGCAGAAAGATGTAAACATCATTTTTTATCTTGAATTATTTATTTATTTTATTTTACTATTTTTTTTTTTAAAGTTTTAGGGGCGGGTTTCTTTTATTTTAAGATTTTAAGCAACGCCATTTATTTTGGAGAAGACTAAAAGTTGCATCATGTTTAGTTTATTTGTGGGTTCTCTTTGGCCATTGGTCATTTTGTCATGCCTAGACACAGATAACTGTGGTTTTTGGCTGATCTGAGCAAATTCAAAATAATGCTATTCCAGACTTAGAATGAAGTATTAGCTAGTAGAGTGCGAATCTTGATGGAACTCTTTAAAATCTTACTTGTTTCCGTTGTTGTAAAAAGGTGTTGAATCTTAGGTATTAGAAGAATGGTGACTGAGGCCTGAGGGCACGATTATTTTCTAATGTTTGACAAACGAACGCATTTAAGCATGGCAATGAGGGCTTTTAATTGCTTGTTCACTATGGTTGAGCATGGTTTTTACTAGCCTGATTCAGTGGTTTCAGTTACATTTTTACTCAAGTAAATGAGCGTTACTTAACTAGATTGTTTTTCTTTCTCAGTACACCTCCTCGACGGGCTCGTAGTCCTCCCAGAAGGTCTCCAGTAGTTCGTAGACGGAGCCGTTCACCTATTAGAAGACCAGCTCGATCACGTTCTCGATCATTTTCACCACGAAGGTATCTGGATGCCTAATGATTTTTTTATCATGACCAACTGCCTTTTAAAGAAAAAAAATTGGTACCTATGGATGCCTAATGAATTTTTTTTTTCATGATCAATTGCCTTTTAAAGAAAAAATATTTCATATTGTTTGATTGTTCCCACTGTGTTTGTGAGGCATAAATCAAATGACGAAAAGTCCCTACCATTGGCCTTGATCAAGAAAGGATAACAATCACAAAGAACCCTTTCTGAACCGTGTTATTGCTGATGTTATGTCCCTACCATTGTTTATGAGCTCCCTTTTTTTTCTAGTTTGGTCCATTGGGTTGTGGGAGATGGGAGAGATACTTATTTTTGGGAGGATAGTCCCCTCTGCTCAAAGTTCTCTAATCTCCATCGTCTGTCCTCCATGAAAAGCAGGGTTATTGTTGATGTTATGTCAGCCTCTGAGGGCTCTCCCTCTTTTTCTTTGGGTTTCCATCGCTCTTTGACCGATAGGGAAGCGGTGAAGGTAGTAGCTATCTTGTCTCTGATCGGAGGGTTCCATTTTAGGGAGGGGAGGGATATTCGTTGTTGGAGTCTTAGCCCTTCCAATAGTTTCTCTTGTAGTTCTTTCTTTCAATGGTTGCTCAATCCCTCTCCTAGTAGGGAGTCTATCTTTTTATTCTTTGAAGAGTGAAAATTCCTAAGAAGGTTAGATTCTTTACTTGGCAAGTTATCCATGAATGAGTTATACTTTCGACAAACTTATGAGAAAGAGGTCTTCGTTGGTTGGGCCGTTCTGCTATCTCCTTTGTCGGAGGGTGGAGGAAGATCTGGATCATATCTTGTGGAGTTGCTCCTTTGCGCGGTCTGTGTGGAGTTTGTTTTTTGAGCCTTCAGTGTGCAGGGCAAGAGTTTTAGAGACCTTAGGGAGATGATCGAGGAGTTCCTTTTCCATCATCCATTTAGAGATAAGGGGAGGGAGTTATGGCTTGCTGGGGTGTGTTGTTTTTTGGGGTTTGTGGGGAGAGAGGAATAGTAGGGTTTTTAGGGGAGTGGAGAGGCACCCGACTGAGGTTTGGACTCTCATTAGATTTAATGTCTCTCTTTGGGCTTCGGTTTCAAAGGCCTTTTGTAACTATTCGTTAGGTATTATCAATCTGGACTGGAGCCCCTTTCTTTAATGGGGTTCCCTTTTGGGGCTGTTTTTTTTGGATGCCCTTGTATTCTTTCATTTTTTCTTGATGAAAGATGGTTTTTCTCTCAAAAACAAAGAACCCTTTTTGAACAGCCCCAACTGAGAGCTACGGAACAAGTGTATGATGATGTTGTGTTAATTCAATCAAAACCGAAAAAAGTGCGTTCCCCCTCCCTCCAGTATTCATCCAAATCGTTTTAGATAACTCTGGGGCTATTGCTCTGGATTTGTTCATAAGATGTTTGAATAAAGATTTGGAAGTCAAATGCCTGATTTTCAGTATTCCATGTTCTTGAGTCTTTCCTTTTGGCCCTGCTGAGGGATCCTTCCAATCTAGACAATGGGAGCCAGCCCTTCTAGATAAGCTAATCTAAGGTTGAGCATTCACAGTGCGTCCTTTAGTATTTGTGAAGGACATAACCTCTCAGATGCTCGTGGCTAAAGTTATAGTTGACAAGCCAAGTGTCTTCCGAAAGAACCAAATGTTGGCAGATGTATAACCTTTCGTTCCATTGTTGAACTGCTAGACCTAGGCGTAAAATACTTTGATGTCTGGTGTTGTGGTAGTGGGATTTTAGATTTTGTAAGGCTGGTAACAAGTACTGAATTTTACTACTTGGCATATCATATCTTTGCTACAATATGTATAGATTAGAAACTAAGCTTCAAATGATCTCAATTTCCTATTTTTTTTACCTAAAACCGTGTATAGGAAATATTAATCAGAATTATTTCCAAATTCCAAAGAAATGTATGTACATGATTGCACATTATTGGGAACATTTCTATCGTAAAGTTAGCCTTTTGAAGGGGATGCTAAGAAAATGCATCTGTAGTTTGATGGCTTGTTCAATATCATATCATTGTCTACTTCACCCTTTCTATGATCGCTAACCTCTCCCTAACCATATTATATTCTACAGTGCTACTACTGACACTTGTTTTTTACTGCTCGCTGTAATCCATTTATTTGTCATATAATTTTCTTATGGTTATCTCTATACAGAGGTCGGCCAGGAGCTGCTGGTAGACGTGGGCGATCGTCATCCTACTCTGCTTCGCCTAGTCCACGCAAGGTTGGTTCTGGTTGATCATTTGCCTTACCCTCCTTTGGGTTTATTGCTTGTTTTTCCTTGCATCCCAAGTCGCTTGACTATTCTTTATTTTATATTACAGGTGGCCAGGAGGGTATCTCGTAGTCCGAGAAGGTACGTGCATTAAATAGAATATCAGTCGACATGTCGATATTTCTATCTGAATATTGAGAATGTTAGGGCCTGGTTCATGGACTTTTGCTGTTTCTTTTTTACTAAAGATGAATATTTTTTCAAATCCGTAAACCACTGAAACCATTATATTTAGATATGCTTTTAAACAAAACTACTAGGGTACGACACCCATTTTACTTTTTTTAGAAAAAGGAAAAATTCTATGCACTAATTAAGTGCTCCTAAAAGAAAGCACTTTAATGCTTTTCAAGTGTTTTTAGAGTTCAGTGATCTTGGTTATCTAGCCAAACACTAGTTTAAAAGAAAAGGAGTATTTTTAGTTGGCTAAAAGCACTTTTTTACTATTTAAAAGCTATCACTCACTCTCAGGTGCACGTTTGGGTTCCAAAAATCAGCAAAATAACTTAATATGACATAACAAAAGCCATTCCAAATCACTCCTAAACATGTCCTTAATCTTATATCATTATCTGTATTATTTTAATGCGTTTTTTTTTTCTTTGCTGTGCAGGCCATTGAGGGGGAGAAGTAGCAGCAGGAGCAGTAGCAGTAGTTCTCCACCCCGCAAGCCATAA

mRNA sequence

ATGGCGAAACCAAGCAGAGGCCGTCGCTCGCCGCCGTCGGGATCGGGATCCTCCTCGCGTTCACGCTCTTACTCCGGCTCTGACTCCCGTTCCAGTTCCCGCTCGCGCTCCAGGTCGCGGTCTGTATCTGTATCCCGTTCTCGCTCCCGTTCCAGGTCCATTTCCTCGTCTTCGTCTCCCTCTCGTAGCGCTAGTTCTCGGAGCCGAAGCCCCCCTCCCCAGAGAAAGAGTCCGACAGAAACAGCTCGGCGGGCTCGCGCTTCACCTCCACCGGCTAAACGAAGTTCTCCTCCACCCAGGAAACCATCTCCTGTACGCGAGTCACTTGTTCTTCACATCGATGCACTGAGTAGGAATGTCCATGAGGGTCATTTAAGAGAAATCTTCAGTAATTTTGGTGAAGTAGTCAATGTTGAGCTGGCAATGGATCGCACAGTCAACCTTCCTAAAGGATATGGATATGTTGAATTCAAAACGAGATCTGATGCTGAAAAAGCCCAAGTGTATATGGATGGTGCCCAAATTGATGGAAATGTTATTCGAGCAAGATTTACATTGCCTCAAAGACAGAAGATGCCTACACCTCCAAGGACTGTAGCAACTGCTCCAAAGAGAGATGGCCCTAAGCCTGAAAATGTTGGCGCTGATGCCGAGAAGGATGACATGAAAAGACAGAGAGAACCTTCACCTCGTCGAAAGCCTCCTTCTCCTAGAAGGCGCTCACCTGTTGCTCGACGAGGTGGGTCTCCTAGAAGACAAGCTGATTCTCCACGCCGTCGTCCGGACTCTCCTCCACGTCGCCGCTTAGAATCTCCTTTCCGTCGCGATTCTCCTCCTAGGAGGAGGCCTGCATCACCAATGAGAGGTGGCCGTTCTCCATCACCTTTGGCTAGGCGACATAGATCTCCTCCAAGGCCCTCTCCAAGAAGAATTCGTGGCAGTCCTGTTCGAAGACGTTCACCACCTCCTCCTAGGCGCCGTACACCTCCTCGACGGGCTCGTAGTCCTCCCAGAAGGTCTCCAGTAGTTCGTAGACGGAGCCGTTCACCTATTAGAAGACCAGCTCGATCACGTTCTCGATCATTTTCACCACGAAGAGGTCGGCCAGGAGCTGCTGGTAGACGTGGGCGATCGTCATCCTACTCTGCTTCGCCTAGTCCACGCAAGGTGGCCAGGAGGGTATCTCGTAGTCCGAGAAGGCCATTGAGGGGGAGAAGTAGCAGCAGGAGCAGTAGCAGTAGTTCTCCACCCCGCAAGCCATAA

Coding sequence (CDS)

ATGGCGAAACCAAGCAGAGGCCGTCGCTCGCCGCCGTCGGGATCGGGATCCTCCTCGCGTTCACGCTCTTACTCCGGCTCTGACTCCCGTTCCAGTTCCCGCTCGCGCTCCAGGTCGCGGTCTGTATCTGTATCCCGTTCTCGCTCCCGTTCCAGGTCCATTTCCTCGTCTTCGTCTCCCTCTCGTAGCGCTAGTTCTCGGAGCCGAAGCCCCCCTCCCCAGAGAAAGAGTCCGACAGAAACAGCTCGGCGGGCTCGCGCTTCACCTCCACCGGCTAAACGAAGTTCTCCTCCACCCAGGAAACCATCTCCTGTACGCGAGTCACTTGTTCTTCACATCGATGCACTGAGTAGGAATGTCCATGAGGGTCATTTAAGAGAAATCTTCAGTAATTTTGGTGAAGTAGTCAATGTTGAGCTGGCAATGGATCGCACAGTCAACCTTCCTAAAGGATATGGATATGTTGAATTCAAAACGAGATCTGATGCTGAAAAAGCCCAAGTGTATATGGATGGTGCCCAAATTGATGGAAATGTTATTCGAGCAAGATTTACATTGCCTCAAAGACAGAAGATGCCTACACCTCCAAGGACTGTAGCAACTGCTCCAAAGAGAGATGGCCCTAAGCCTGAAAATGTTGGCGCTGATGCCGAGAAGGATGACATGAAAAGACAGAGAGAACCTTCACCTCGTCGAAAGCCTCCTTCTCCTAGAAGGCGCTCACCTGTTGCTCGACGAGGTGGGTCTCCTAGAAGACAAGCTGATTCTCCACGCCGTCGTCCGGACTCTCCTCCACGTCGCCGCTTAGAATCTCCTTTCCGTCGCGATTCTCCTCCTAGGAGGAGGCCTGCATCACCAATGAGAGGTGGCCGTTCTCCATCACCTTTGGCTAGGCGACATAGATCTCCTCCAAGGCCCTCTCCAAGAAGAATTCGTGGCAGTCCTGTTCGAAGACGTTCACCACCTCCTCCTAGGCGCCGTACACCTCCTCGACGGGCTCGTAGTCCTCCCAGAAGGTCTCCAGTAGTTCGTAGACGGAGCCGTTCACCTATTAGAAGACCAGCTCGATCACGTTCTCGATCATTTTCACCACGAAGAGGTCGGCCAGGAGCTGCTGGTAGACGTGGGCGATCGTCATCCTACTCTGCTTCGCCTAGTCCACGCAAGGTGGCCAGGAGGGTATCTCGTAGTCCGAGAAGGCCATTGAGGGGGAGAAGTAGCAGCAGGAGCAGTAGCAGTAGTTCTCCACCCCGCAAGCCATAA

Protein sequence

MAKPSRGRRSPPSGSGSSSRSRSYSGSDSRSSSRSRSRSRSVSVSRSRSRSRSISSSSSPSRSASSRSRSPPPQRKSPTETARRARASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRARFTLPQRQKMPTPPRTVATAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPVARRGGSPRRQADSPRRRPDSPPRRRLESPFRRDSPPRRRPASPMRGGRSPSPLARRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSFSPRRGRPGAAGRRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRKP

Homology

[Close]

BLAST of Lag0037652 vs. NCBI nr
Match: XP_031740559.1 (serine/arginine-rich splicing factor SR45 [Cucumis sativus] >KAE8649784.1 hypothetical protein Csa_012847 [Cucumis sativus])

HSP 1 Score: 681.8 bits (1758), Expect = 3.8e-192
Identity = 406/421 (96.44%), Postives = 409/421 (97.15%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSDSRSSSRSRSRSRSVSVSRSRSRSRSISSSSSP 60
           MAKPSRGRRSPPSGS SSSRSRS+SGSDSRSS  SRSRSRS SVSRSRSRSRSISSSSS 
Sbjct: 1   MAKPSRGRRSPPSGSASSSRSRSFSGSDSRSS--SRSRSRSASVSRSRSRSRSISSSSSL 60

Query: 61  SRSASSRSRSPPPQRKSPTETARRARASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV 120
           SRS SSRSRSPPPQRKSPTETARR+R SPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV
Sbjct: 61  SRSGSSRSRSPPPQRKSPTETARRSRPSPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV 120

Query: 121 HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI 180
           HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI
Sbjct: 121 HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI 180

Query: 181 RARFTLPQRQKMPTPPRTVATAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRR 240
           RARFTLPQRQKMPTPPRTVAT PKRDGPKPENVG DAEKDDMKRQREPSPRRKPPSPRRR
Sbjct: 181 RARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKDDMKRQREPSPRRKPPSPRRR 240

Query: 241 SPVARRGGSPRRQADSPRRRPDSPPRRRLESPFRRDS-PPRRRPASPMRGGRSPSPLARR 300
           SPVARRGGSPRRQ DSPRRRPDSPPRRR+ESPFRRDS PPRRRPASPMRGGRSPSPLARR
Sbjct: 241 SPVARRGGSPRRQPDSPRRRPDSPPRRRIESPFRRDSPPPRRRPASPMRGGRSPSPLARR 300

Query: 301 HRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRS 360
           HRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRS
Sbjct: 301 HRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRS 360

Query: 361 RSFSPRRGRPGAAGRRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRK 420
           RSFSPRRGRPGAAGRRGRSSSYSASPSPRKV RRVSRSPRRPLRGRSSSRSSSSSSPPRK
Sbjct: 361 RSFSPRRGRPGAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRK 419

[Close]

BLAST of Lag0037652 vs. NCBI nr
Match: XP_038899577.1 (serine/arginine-rich splicing factor SR45-like [Benincasa hispida])

HSP 1 Score: 677.9 bits (1748), Expect = 5.4e-191
Identity = 402/420 (95.71%), Postives = 407/420 (96.90%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSDSRSSSRSRSRSRSVSVSRSRSRSRSISSSSSP 60
           MAKPSRGRRSPPSGSGSSSRSRS+SGSDSRSS  SRSRSRS SVSRSRSRSRSISSSSS 
Sbjct: 1   MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSS--SRSRSRSASVSRSRSRSRSISSSSSL 60

Query: 61  SRSASSRSRSPPPQRKSPTETARRARASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV 120
           SRS SSRSRSPPPQRKSPTETARR RASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV
Sbjct: 61  SRSGSSRSRSPPPQRKSPTETARRTRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV 120

Query: 121 HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI 180
           HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI
Sbjct: 121 HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI 180

Query: 181 RARFTLPQRQKMPTPPRTVATAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRR 240
           RARFTLPQRQKMPTPPRTVAT PKR+GPK +NVG DAEKDDMKRQREPSPRRKPPSPRRR
Sbjct: 181 RARFTLPQRQKMPTPPRTVATVPKREGPKLDNVGPDAEKDDMKRQREPSPRRKPPSPRRR 240

Query: 241 SPVARRGGSPRRQADSPRRRPDSPPRRRLESPFRRDSPPRRRPASPMRGGRSPSPLARRH 300
           SPVARRGGSPRRQ DSPRRRP+SPPRRR+ESPFRRDSPPRRRPASPMRGGRSPSPLARRH
Sbjct: 241 SPVARRGGSPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPMRGGRSPSPLARRH 300

Query: 301 RSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSR 360
           RSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSR
Sbjct: 301 RSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSR 360

Query: 361 SFSPRRGRPGAAGRRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRKP 420
           SFSPRRGRP AAGRRGRSSSYS SPSPRKV RRVSRSPRRPLRGRSSSRSSSSSSPPRKP
Sbjct: 361 SFSPRRGRPAAAGRRGRSSSYSGSPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 418

[Close]

BLAST of Lag0037652 vs. NCBI nr
Match: XP_008465435.1 (PREDICTED: serine/arginine-rich splicing factor SR45 [Cucumis melo])

HSP 1 Score: 672.9 bits (1735), Expect = 1.7e-189
Identity = 403/421 (95.72%), Postives = 408/421 (96.91%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSDSRSSSRSRSRSRSVSVSRSRSRSRSISSSSSP 60
           MAKPSRGRRSPPSGSGSSSRSRS+SGSDSRSS  SRSRSRS SVSRSRSRSRSISSSSS 
Sbjct: 1   MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSS--SRSRSRSASVSRSRSRSRSISSSSSL 60

Query: 61  SRSASSRSRSPPPQRKSPTETARRARASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV 120
           SRS SSRSR+PPPQRKSPTETARR+RASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV
Sbjct: 61  SRSGSSRSRTPPPQRKSPTETARRSRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV 120

Query: 121 HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI 180
           HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI
Sbjct: 121 HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI 180

Query: 181 RARFTLPQRQKMPTPPRTVATAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRR 240
           RARFTLPQRQKMPTPPRTVAT  KRDGPKPENVG DAEKDDMKRQRE SPRRK PSPRRR
Sbjct: 181 RARFTLPQRQKMPTPPRTVATVSKRDGPKPENVGPDAEKDDMKRQRESSPRRKLPSPRRR 240

Query: 241 SPVARRGGSPRRQADSPRRRPDSPPRRRLESPFRRDS-PPRRRPASPMRGGRSPSPLARR 300
           SPVARRGGSPRRQ DSPRRRP+SPPRRR+ESPFRRDS PPRRRPASPMRGGRSPSPLARR
Sbjct: 241 SPVARRGGSPRRQPDSPRRRPESPPRRRVESPFRRDSPPPRRRPASPMRGGRSPSPLARR 300

Query: 301 HRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRS 360
           HRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRS
Sbjct: 301 HRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRS 360

Query: 361 RSFSPRRGRPGAAGRRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRK 420
           RSFSPRRGRPGAAGRRGRSSSYSASPSPRKV RRVSRSPRRPLRGRSSSRSSSSSSPPRK
Sbjct: 361 RSFSPRRGRPGAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRK 419

[Close]

BLAST of Lag0037652 vs. NCBI nr
Match: XP_022136031.1 (serine/arginine-rich splicing factor SR45 isoform X2 [Momordica charantia])

HSP 1 Score: 664.1 bits (1712), Expect = 8.1e-187
Identity = 401/423 (94.80%), Postives = 406/423 (95.98%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSG--SGSSSRSRSYSGSDSRSSSRSRSRSRSVSVSRSRSRSRSISSSS 60
           MAKPSRGRRSPPSG  SGSSSRSRS+SGSDSRSSSRSRSRSRSVSVSRSRSRSRS SSSS
Sbjct: 1   MAKPSRGRRSPPSGSASGSSSRSRSFSGSDSRSSSRSRSRSRSVSVSRSRSRSRSNSSSS 60

Query: 61  SPSRSASSRSRSPPPQRKSPTETARRARASPPPAKRSSPPPRKPSPVRESLVLHIDALSR 120
           S SRS SSRSRSPPPQRKSPTETARR RASPPPAKRSSPPPRKPSPVRESLVLHIDALSR
Sbjct: 61  SLSRSGSSRSRSPPPQRKSPTETARRTRASPPPAKRSSPPPRKPSPVRESLVLHIDALSR 120

Query: 121 NVHEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGN 180
           NVHEGHLREIF NFGEVVNVELAMDRTVNLPKGYGYVEFKTR DAEKAQVYMDGAQIDGN
Sbjct: 121 NVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGN 180

Query: 181 VIRARFTLPQRQKMPTPPRTVATAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPR 240
           VIR RFTLPQRQKMPTPPRTVA APKRDGPKPENVGA+AEKDDMKRQREPSPRRKPPSPR
Sbjct: 181 VIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGANAEKDDMKRQREPSPRRKPPSPR 240

Query: 241 RRSPVARRGGS-PRRQADSPRRRPDSPPRRRLESPFRRDSPPRRRPASPMRGGRSPSPLA 300
           RRSPVARRGGS PRRQ DSPRRRP+SPPRRR+ESPFRRDSPPRRRPASP+R GRSPSPL 
Sbjct: 241 RRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIR-GRSPSPLP 300

Query: 301 RRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARS 360
           RRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRR RSPPRRSPVVRRRSRSPIRRPARS
Sbjct: 301 RRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRVRSPPRRSPVVRRRSRSPIRRPARS 360

Query: 361 RSRSFSPRRGRPGAAGRRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPP 420
           RSRSFSPRRGRP AA RRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPP
Sbjct: 361 RSRSFSPRRGRPAAAARRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPP 420

[Close]

BLAST of Lag0037652 vs. NCBI nr
Match: XP_023525494.1 (serine/arginine-rich splicing factor SR45-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG7037487.1 Serine/arginine-rich splicing factor SR45 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 659.1 bits (1699), Expect = 2.6e-185
Identity = 396/420 (94.29%), Postives = 399/420 (95.00%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSDSRSSSRSRSRSRSVSVSRSRSRSRSISSSSSP 60
           MAKPSRGRRSPPS SGSSSRSRSYSGSDSRSSSRSRSRSRSVSV    S SRSISSSSSP
Sbjct: 1   MAKPSRGRRSPPSRSGSSSRSRSYSGSDSRSSSRSRSRSRSVSV----SHSRSISSSSSP 60

Query: 61  SRSASSRSRSPPPQRKSPTETARRARASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV 120
           SRSASSRSRSPPPQRKS TETARR RASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV
Sbjct: 61  SRSASSRSRSPPPQRKSSTETARRTRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV 120

Query: 121 HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI 180
           HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI
Sbjct: 121 HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI 180

Query: 181 RARFTLPQRQKMPTPPRTVATAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRR 240
           RARFTLPQRQKM +PPRT A A KRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRR
Sbjct: 181 RARFTLPQRQKMASPPRTAAAASKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRR 240

Query: 241 SPVARRGGSPRRQADSPRRRPDSPPRRRLESPFRRDSPPRRRPASPMRGGRSPSPLARRH 300
           SPVARRGGSPRRQ DSPRRRP+SPPRRR+      DSPPRRRPASPMRGGRSPSPL RRH
Sbjct: 241 SPVARRGGSPRRQPDSPRRRPESPPRRRV------DSPPRRRPASPMRGGRSPSPLGRRH 300

Query: 301 RSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSR 360
           RSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRP RSRSR
Sbjct: 301 RSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPGRSRSR 360

Query: 361 SFSPRRGRPGAAGRRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRKP 420
           SFSPRRGRPGAAGRRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRKP
Sbjct: 361 SFSPRRGRPGAAGRRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRKP 410

[Close]

BLAST of Lag0037652 vs. ExPASy Swiss-Prot
Match: Q9SEE9 (Serine/arginine-rich splicing factor SR45 OS=Arabidopsis thaliana OX=3702 GN=SR45 PE=1 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 6.2e-113
Identity = 293/429 (68.30%), Postives = 333/429 (77.62%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSDSRSSSRSRS-RSRSVSVSRSRSRSRSISSSSS 60
           MAKPSRGRRSP           S SGS SRSSSRSRS  S S S+SRSRSRSRS+SSSSS
Sbjct: 1   MAKPSRGRRSP-----------SVSGSSSRSSSRSRSGSSPSRSISRSRSRSRSLSSSSS 60

Query: 61  PSRSASSRSRSPPPQRKSPTETARRARASPPPAKRSSPPPRKPSPVRESLVLHIDALSRN 120
           PSRS SS SRSPP + KSP   ARR R+ PPP  + +  P K + V+ESLVLH+D+LSRN
Sbjct: 61  PSRSVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKKA-VQESLVLHVDSLSRN 120

Query: 121 VHEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNV 180
           V+E HL+EIF NFGEV++VE+AMDR VNLP+G+GYVEFK R+DAEKAQ+YMDGAQIDG V
Sbjct: 121 VNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGKV 180

Query: 181 IRARFTLPQRQKMPTPPRTVATAPKRDGPKPENVGADAEKD-DMKRQREPSPRRKPP-SP 240
           ++A FTLP RQK+ +PP+ V+ APKRD PK +N  ADAEKD   +R RE SP+RK   SP
Sbjct: 181 VKATFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRRPRETSPQRKTGLSP 240

Query: 241 RRRSPVARRGGSPRRQADSPRRRPDSPPRRRLESPFRR--DSPPRRRPASPMRGGRSPSP 300
           RRRSP+ RRG SPR      RR PDSP RRR  SP RR  D+PPRRRPASP RG    SP
Sbjct: 241 RRRSPLPRRGLSPR------RRSPDSPHRRRPGSPIRRRGDTPPRRRPASPSRGRSPSSP 300

Query: 301 LARRHRSPPRPSPRRIRGSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRRSRSPIRRP 360
             RR+RSPPR SPRRIRGSPVRRRSP P RRR+ PPRR RSPPRRSP +RRRSRSPIRRP
Sbjct: 301 PPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIRRP 360

Query: 361 ARSRSRSFSPRRGRPGAAGRRGRSSSYSASPSPRKVARRV--SRSPRRPLRG-RSSSRSS 420
            RSRS S SPR+GR G AGRRGRSSSYS+SPSPR++ R++  SRSP+RPLRG RSSS SS
Sbjct: 361 GRSRSSSISPRKGR-GPAGRRGRSSSYSSSPSPRRIPRKISRSRSPKRPLRGKRSSSNSS 409

[Close]

BLAST of Lag0037652 vs. ExPASy Swiss-Prot
Match: Q28E41 (RNA-binding protein with serine-rich domain 1 OS=Xenopus tropicalis OX=8364 GN=rnps1 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.4e-19
Identity = 112/260 (43.08%), Postives = 141/260 (54.23%), Query Frame = 0


Query: 5   SRGRRSPPSGSGSSSRSRSYSGSDSRSSSRSRSRSRSVSVSRSRSRSRSISSSSSPSRSA 64
           +R RRS  SGS SSSRSRS S S S S S S S S S S S S   SRS SSSSS S S+
Sbjct: 64  ARKRRSASSGSSSSSRSRSSSSSSSSSGSSSGSSSGSSSSSAS---SRSGSSSSSRSSSS 123

Query: 65  SSRSRSPPPQRKSPTETARRARASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHEGH 124
           SS S SP P R+   +  RR+R+     KR     ++ SP      +HI  L+RNV + H
Sbjct: 124 SSSSGSPSPSRRR-HDNRRRSRSKSKQPKRDEKERKRRSPSPRPTKVHIGRLTRNVTKDH 183

Query: 125 LREIFSNFGEVVNVELAMDR-TVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRAR 184
           + EIFS +G++  +++ +DR   +L KGY YVEF+   +AEKA  +MDG QIDG  I A 
Sbjct: 184 ILEIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKALKHMDGGQIDGQEITAS 243

Query: 185 FTLPQRQKMPTPPRTVATAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPV 244
             L        P R   + P+R  P P           M R+  P  RR+  SPRRRSPV
Sbjct: 244 AVLTPWPMRAMPRR--FSPPRRMLPPP----------PMWRRSPPRMRRRSRSPRRRSPV 303

Query: 245 ARRGGSPRRQADSPRRRPDS 264
            RR  SP R+    R   +S
Sbjct: 304 RRRSRSPARRRHRSRSSSNS 307

[Close]

BLAST of Lag0037652 vs. ExPASy Swiss-Prot
Match: Q15287 (RNA-binding protein with serine-rich domain 1 OS=Homo sapiens OX=9606 GN=RNPS1 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 5.2e-19
Identity = 110/260 (42.31%), Postives = 145/260 (55.77%), Query Frame = 0


Query: 5   SRGRRSPPSGSGSSSRSRSYSGSDSRSSSRSRSRSRSVSVSRSRSRSRSISSSSSPSRSA 64
           +R RRS  SGS SS+RSRS S S S SS+ + S S S S S S   SRS SSS+S S S+
Sbjct: 62  TRKRRSASSGS-SSTRSRSSSTSSSGSSTSTGSSSGSSSSSAS---SRSGSSSTSRSSSS 121

Query: 65  SSRSRSPPPQRKSPTETARRARASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHEGH 124
           SS S SP P R+   +  RR+R+   P KR     ++ SP  +   +HI  L+RNV + H
Sbjct: 122 SSSSGSPSPSRRR-HDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDH 181

Query: 125 LREIFSNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRAR 184
           + EIFS +G++  +++ ++R   +L KGY YVEF+   +AEKA  +MDG QIDG  I A 
Sbjct: 182 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 241

Query: 185 FTLPQRQKMPTPPRTVATAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPV 244
             L      P PP    + P+R  P P           M R+  P  RR+  SPRRRSPV
Sbjct: 242 AVL---APWPRPPPRRFSPPRRMLPPP----------PMWRRSPPRMRRRSRSPRRRSPV 301

Query: 245 ARRGGSPRRQADSPRRRPDS 264
            RR  SP R+    R   +S
Sbjct: 302 RRRSRSPGRRRHRSRSSSNS 303

[Close]

BLAST of Lag0037652 vs. ExPASy Swiss-Prot
Match: Q4R5N1 (RNA-binding protein with serine-rich domain 1 OS=Macaca fascicularis OX=9541 GN=RNPS1 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 5.2e-19
Identity = 110/260 (42.31%), Postives = 145/260 (55.77%), Query Frame = 0


Query: 5   SRGRRSPPSGSGSSSRSRSYSGSDSRSSSRSRSRSRSVSVSRSRSRSRSISSSSSPSRSA 64
           +R RRS  SGS SS+RSRS S S S SS+ + S S S S S S   SRS SSS+S S S+
Sbjct: 62  TRKRRSASSGS-SSTRSRSSSTSSSGSSTSTGSSSGSSSSSAS---SRSGSSSTSRSSSS 121

Query: 65  SSRSRSPPPQRKSPTETARRARASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHEGH 124
           SS S SP P R+   +  RR+R+   P KR     ++ SP  +   +HI  L+RNV + H
Sbjct: 122 SSSSGSPSPSRRR-HDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDH 181

Query: 125 LREIFSNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRAR 184
           + EIFS +G++  +++ ++R   +L KGY YVEF+   +AEKA  +MDG QIDG  I A 
Sbjct: 182 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 241

Query: 185 FTLPQRQKMPTPPRTVATAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPV 244
             L      P PP    + P+R  P P           M R+  P  RR+  SPRRRSPV
Sbjct: 242 AVL---APWPRPPPRRFSPPRRMLPPP----------PMWRRSPPRMRRRSRSPRRRSPV 301

Query: 245 ARRGGSPRRQADSPRRRPDS 264
            RR  SP R+    R   +S
Sbjct: 302 RRRSRSPGRRRHRSRSSSNS 303

[Close]

BLAST of Lag0037652 vs. ExPASy Swiss-Prot
Match: Q99M28 (RNA-binding protein with serine-rich domain 1 OS=Mus musculus OX=10090 GN=Rnps1 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 5.2e-19
Identity = 110/260 (42.31%), Postives = 145/260 (55.77%), Query Frame = 0


Query: 5   SRGRRSPPSGSGSSSRSRSYSGSDSRSSSRSRSRSRSVSVSRSRSRSRSISSSSSPSRSA 64
           +R RRS  SGS SS+RSRS S S S SS+ + S S S S S S   SRS SSS+S S S+
Sbjct: 62  TRKRRSASSGS-SSTRSRSSSTSSSGSSTSTGSSSGSSSSSAS---SRSGSSSTSRSSSS 121

Query: 65  SSRSRSPPPQRKSPTETARRARASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHEGH 124
           SS S SP P R+   +  RR+R+   P KR     ++ SP  +   +HI  L+RNV + H
Sbjct: 122 SSSSGSPSPSRRR-HDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDH 181

Query: 125 LREIFSNFGEVVNVELAMDRT-VNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRAR 184
           + EIFS +G++  +++ ++R   +L KGY YVEF+   +AEKA  +MDG QIDG  I A 
Sbjct: 182 IMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITAT 241

Query: 185 FTLPQRQKMPTPPRTVATAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRRSPV 244
             L      P PP    + P+R  P P           M R+  P  RR+  SPRRRSPV
Sbjct: 242 AVL---APWPRPPPRRFSPPRRMLPPP----------PMWRRSPPRMRRRSRSPRRRSPV 301

Query: 245 ARRGGSPRRQADSPRRRPDS 264
            RR  SP R+    R   +S
Sbjct: 302 RRRSRSPGRRRHRSRSSSNS 303

[Close]

BLAST of Lag0037652 vs. ExPASy TrEMBL
Match: A0A0A0KZM9 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G607050 PE=4 SV=1)

HSP 1 Score: 683.7 bits (1763), Expect = 4.8e-193
Identity = 407/421 (96.67%), Postives = 410/421 (97.39%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSDSRSSSRSRSRSRSVSVSRSRSRSRSISSSSSP 60
           MAKPSRGRRSPPSGS SSSRSRS+SGSDSRSS  SRSRSRS SVSRSRSRSRSISSSSS 
Sbjct: 1   MAKPSRGRRSPPSGSASSSRSRSFSGSDSRSS--SRSRSRSASVSRSRSRSRSISSSSSL 60

Query: 61  SRSASSRSRSPPPQRKSPTETARRARASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV 120
           SRS SSRSRSPPPQRKSPTETARR+RASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV
Sbjct: 61  SRSGSSRSRSPPPQRKSPTETARRSRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV 120

Query: 121 HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI 180
           HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI
Sbjct: 121 HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI 180

Query: 181 RARFTLPQRQKMPTPPRTVATAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRR 240
           RARFTLPQRQKMPTPPRTVAT PKRDGPKPENVG DAEKDDMKRQREPSPRRKPPSPRRR
Sbjct: 181 RARFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKDDMKRQREPSPRRKPPSPRRR 240

Query: 241 SPVARRGGSPRRQADSPRRRPDSPPRRRLESPFRRDS-PPRRRPASPMRGGRSPSPLARR 300
           SPVARRGGSPRRQ DSPRRRPDSPPRRR+ESPFRRDS PPRRRPASPMRGGRSPSPLARR
Sbjct: 241 SPVARRGGSPRRQPDSPRRRPDSPPRRRIESPFRRDSPPPRRRPASPMRGGRSPSPLARR 300

Query: 301 HRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRS 360
           HRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRS
Sbjct: 301 HRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRS 360

Query: 361 RSFSPRRGRPGAAGRRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRK 420
           RSFSPRRGRPGAAGRRGRSSSYSASPSPRKV RRVSRSPRRPLRGRSSSRSSSSSSPPRK
Sbjct: 361 RSFSPRRGRPGAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRK 419

[Close]

BLAST of Lag0037652 vs. ExPASy TrEMBL
Match: A0A1S3CPA3 (serine/arginine-rich splicing factor SR45 OS=Cucumis melo OX=3656 GN=LOC103503047 PE=4 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 8.5e-190
Identity = 403/421 (95.72%), Postives = 408/421 (96.91%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSDSRSSSRSRSRSRSVSVSRSRSRSRSISSSSSP 60
           MAKPSRGRRSPPSGSGSSSRSRS+SGSDSRSS  SRSRSRS SVSRSRSRSRSISSSSS 
Sbjct: 1   MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSS--SRSRSRSASVSRSRSRSRSISSSSSL 60

Query: 61  SRSASSRSRSPPPQRKSPTETARRARASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV 120
           SRS SSRSR+PPPQRKSPTETARR+RASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV
Sbjct: 61  SRSGSSRSRTPPPQRKSPTETARRSRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV 120

Query: 121 HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI 180
           HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI
Sbjct: 121 HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI 180

Query: 181 RARFTLPQRQKMPTPPRTVATAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRR 240
           RARFTLPQRQKMPTPPRTVAT  KRDGPKPENVG DAEKDDMKRQRE SPRRK PSPRRR
Sbjct: 181 RARFTLPQRQKMPTPPRTVATVSKRDGPKPENVGPDAEKDDMKRQRESSPRRKLPSPRRR 240

Query: 241 SPVARRGGSPRRQADSPRRRPDSPPRRRLESPFRRDS-PPRRRPASPMRGGRSPSPLARR 300
           SPVARRGGSPRRQ DSPRRRP+SPPRRR+ESPFRRDS PPRRRPASPMRGGRSPSPLARR
Sbjct: 241 SPVARRGGSPRRQPDSPRRRPESPPRRRVESPFRRDSPPPRRRPASPMRGGRSPSPLARR 300

Query: 301 HRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRS 360
           HRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRS
Sbjct: 301 HRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRS 360

Query: 361 RSFSPRRGRPGAAGRRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRK 420
           RSFSPRRGRPGAAGRRGRSSSYSASPSPRKV RRVSRSPRRPLRGRSSSRSSSSSSPPRK
Sbjct: 361 RSFSPRRGRPGAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRK 419

[Close]

BLAST of Lag0037652 vs. ExPASy TrEMBL
Match: A0A6J1C2D4 (serine/arginine-rich splicing factor SR45 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007818 PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 3.9e-187
Identity = 401/423 (94.80%), Postives = 406/423 (95.98%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSG--SGSSSRSRSYSGSDSRSSSRSRSRSRSVSVSRSRSRSRSISSSS 60
           MAKPSRGRRSPPSG  SGSSSRSRS+SGSDSRSSSRSRSRSRSVSVSRSRSRSRS SSSS
Sbjct: 1   MAKPSRGRRSPPSGSASGSSSRSRSFSGSDSRSSSRSRSRSRSVSVSRSRSRSRSNSSSS 60

Query: 61  SPSRSASSRSRSPPPQRKSPTETARRARASPPPAKRSSPPPRKPSPVRESLVLHIDALSR 120
           S SRS SSRSRSPPPQRKSPTETARR RASPPPAKRSSPPPRKPSPVRESLVLHIDALSR
Sbjct: 61  SLSRSGSSRSRSPPPQRKSPTETARRTRASPPPAKRSSPPPRKPSPVRESLVLHIDALSR 120

Query: 121 NVHEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGN 180
           NVHEGHLREIF NFGEVVNVELAMDRTVNLPKGYGYVEFKTR DAEKAQVYMDGAQIDGN
Sbjct: 121 NVHEGHLREIFCNFGEVVNVELAMDRTVNLPKGYGYVEFKTRPDAEKAQVYMDGAQIDGN 180

Query: 181 VIRARFTLPQRQKMPTPPRTVATAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPR 240
           VIR RFTLPQRQKMPTPPRTVA APKRDGPKPENVGA+AEKDDMKRQREPSPRRKPPSPR
Sbjct: 181 VIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGANAEKDDMKRQREPSPRRKPPSPR 240

Query: 241 RRSPVARRGGS-PRRQADSPRRRPDSPPRRRLESPFRRDSPPRRRPASPMRGGRSPSPLA 300
           RRSPVARRGGS PRRQ DSPRRRP+SPPRRR+ESPFRRDSPPRRRPASP+R GRSPSPL 
Sbjct: 241 RRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIR-GRSPSPLP 300

Query: 301 RRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARS 360
           RRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRR RSPPRRSPVVRRRSRSPIRRPARS
Sbjct: 301 RRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRVRSPPRRSPVVRRRSRSPIRRPARS 360

Query: 361 RSRSFSPRRGRPGAAGRRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPP 420
           RSRSFSPRRGRP AA RRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPP
Sbjct: 361 RSRSFSPRRGRPAAAARRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPP 420

[Close]

BLAST of Lag0037652 vs. ExPASy TrEMBL
Match: A0A6J1C2C4 (serine/arginine-rich splicing factor SR45 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007818 PE=4 SV=1)

HSP 1 Score: 657.9 bits (1696), Expect = 2.8e-185
Identity = 401/428 (93.69%), Postives = 406/428 (94.86%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSG--SGSSSRSRSYSGSDSRSSSRSRSRSRSVSVSRSRSRSRSISSSS 60
           MAKPSRGRRSPPSG  SGSSSRSRS+SGSDSRSSSRSRSRSRSVSVSRSRSRSRS SSSS
Sbjct: 1   MAKPSRGRRSPPSGSASGSSSRSRSFSGSDSRSSSRSRSRSRSVSVSRSRSRSRSNSSSS 60

Query: 61  SPSRSASSRSRSPPPQRKSPTETARRARASPPPAKRSSPPPRKPSPVRESLVLHIDALSR 120
           S SRS SSRSRSPPPQRKSPTETARR RASPPPAKRSSPPPRKPSPVRESLVLHIDALSR
Sbjct: 61  SLSRSGSSRSRSPPPQRKSPTETARRTRASPPPAKRSSPPPRKPSPVRESLVLHIDALSR 120

Query: 121 NVHEGHLREIFSNFGEVVNVELAMDRT-----VNLPKGYGYVEFKTRSDAEKAQVYMDGA 180
           NVHEGHLREIF NFGEVVNVELAMDRT     VNLPKGYGYVEFKTR DAEKAQVYMDGA
Sbjct: 121 NVHEGHLREIFCNFGEVVNVELAMDRTVSLHHVNLPKGYGYVEFKTRPDAEKAQVYMDGA 180

Query: 181 QIDGNVIRARFTLPQRQKMPTPPRTVATAPKRDGPKPENVGADAEKDDMKRQREPSPRRK 240
           QIDGNVIR RFTLPQRQKMPTPPRTVA APKRDGPKPENVGA+AEKDDMKRQREPSPRRK
Sbjct: 181 QIDGNVIRVRFTLPQRQKMPTPPRTVAIAPKRDGPKPENVGANAEKDDMKRQREPSPRRK 240

Query: 241 PPSPRRRSPVARRGGS-PRRQADSPRRRPDSPPRRRLESPFRRDSPPRRRPASPMRGGRS 300
           PPSPRRRSPVARRGGS PRRQ DSPRRRP+SPPRRR+ESPFRRDSPPRRRPASP+R GRS
Sbjct: 241 PPSPRRRSPVARRGGSPPRRQPDSPRRRPESPPRRRVESPFRRDSPPRRRPASPIR-GRS 300

Query: 301 PSPLARRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIR 360
           PSPL RRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRR RSPPRRSPVVRRRSRSPIR
Sbjct: 301 PSPLPRRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRVRSPPRRSPVVRRRSRSPIR 360

Query: 361 RPARSRSRSFSPRRGRPGAAGRRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSS 420
           RPARSRSRSFSPRRGRP AA RRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSS
Sbjct: 361 RPARSRSRSFSPRRGRPAAAARRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSS 420

[Close]

BLAST of Lag0037652 vs. ExPASy TrEMBL
Match: A0A6J1FJN7 (serine/arginine-rich splicing factor SR45-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445960 PE=4 SV=1)

HSP 1 Score: 657.9 bits (1696), Expect = 2.8e-185
Identity = 395/420 (94.05%), Postives = 399/420 (95.00%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSDSRSSSRSRSRSRSVSVSRSRSRSRSISSSSSP 60
           MAKPSRGRRSPPS SGSSSRSRSYSGSDSRSSSRSRSRSRSVSV    S SRSISSSSSP
Sbjct: 1   MAKPSRGRRSPPSRSGSSSRSRSYSGSDSRSSSRSRSRSRSVSV----SHSRSISSSSSP 60

Query: 61  SRSASSRSRSPPPQRKSPTETARRARASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV 120
           SRSASSRSRSPPPQRKS TETARR RASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV
Sbjct: 61  SRSASSRSRSPPPQRKSSTETARRTRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNV 120

Query: 121 HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI 180
           HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI
Sbjct: 121 HEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVI 180

Query: 181 RARFTLPQRQKMPTPPRTVATAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRRR 240
           RARFTLPQRQKM +PPRT A A KRDGPKPENVGADAEKDD+KRQREPSPRRKPPSPRRR
Sbjct: 181 RARFTLPQRQKMASPPRTAAAASKRDGPKPENVGADAEKDDLKRQREPSPRRKPPSPRRR 240

Query: 241 SPVARRGGSPRRQADSPRRRPDSPPRRRLESPFRRDSPPRRRPASPMRGGRSPSPLARRH 300
           SPVARRGGSPRRQ DSPRRRP+SPPRRR+      DSPPRRRPASPMRGGRSPSPL RRH
Sbjct: 241 SPVARRGGSPRRQPDSPRRRPESPPRRRV------DSPPRRRPASPMRGGRSPSPLGRRH 300

Query: 301 RSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSR 360
           RSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRP RSRSR
Sbjct: 301 RSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPGRSRSR 360

Query: 361 SFSPRRGRPGAAGRRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRKP 420
           SFSPRRGRPGAAGRRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRKP
Sbjct: 361 SFSPRRGRPGAAGRRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRKP 410

[Close]

BLAST of Lag0037652 vs. TAIR 10
Match: AT1G16610.1 (arginine/serine-rich 45 )

HSP 1 Score: 409.1 bits (1050), Expect = 4.4e-114
Identity = 293/429 (68.30%), Postives = 333/429 (77.62%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSDSRSSSRSRS-RSRSVSVSRSRSRSRSISSSSS 60
           MAKPSRGRRSP           S SGS SRSSSRSRS  S S S+SRSRSRSRS+SSSSS
Sbjct: 1   MAKPSRGRRSP-----------SVSGSSSRSSSRSRSGSSPSRSISRSRSRSRSLSSSSS 60

Query: 61  PSRSASSRSRSPPPQRKSPTETARRARASPPPAKRSSPPPRKPSPVRESLVLHIDALSRN 120
           PSRS SS SRSPP + KSP   ARR R+ PPP  + +  P K + V+ESLVLH+D+LSRN
Sbjct: 61  PSRSVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKKA-VQESLVLHVDSLSRN 120

Query: 121 VHEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNV 180
           V+E HL+EIF NFGEV++VE+AMDR VNLP+G+GYVEFK R+DAEKAQ+YMDGAQIDG V
Sbjct: 121 VNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGKV 180

Query: 181 IRARFTLPQRQKMPTPPRTVATAPKRDGPKPENVGADAEKD-DMKRQREPSPRRKPP-SP 240
           ++A FTLP RQK+ +PP+ V+ APKRD PK +N  ADAEKD   +R RE SP+RK   SP
Sbjct: 181 VKATFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRRPRETSPQRKTGLSP 240

Query: 241 RRRSPVARRGGSPRRQADSPRRRPDSPPRRRLESPFRR--DSPPRRRPASPMRGGRSPSP 300
           RRRSP+ RRG SPR      RR PDSP RRR  SP RR  D+PPRRRPASP RG    SP
Sbjct: 241 RRRSPLPRRGLSPR------RRSPDSPHRRRPGSPIRRRGDTPPRRRPASPSRGRSPSSP 300

Query: 301 LARRHRSPPRPSPRRIRGSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRRSRSPIRRP 360
             RR+RSPPR SPRRIRGSPVRRRSP P RRR+ PPRR RSPPRRSP +RRRSRSPIRRP
Sbjct: 301 PPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIRRP 360

Query: 361 ARSRSRSFSPRRGRPGAAGRRGRSSSYSASPSPRKVARRV--SRSPRRPLRG-RSSSRSS 420
            RSRS S SPR+GR G AGRRGRSSSYS+SPSPR++ R++  SRSP+RPLRG RSSS SS
Sbjct: 361 GRSRSSSISPRKGR-GPAGRRGRSSSYSSSPSPRRIPRKISRSRSPKRPLRGKRSSSNSS 409

[Close]

BLAST of Lag0037652 vs. TAIR 10
Match: AT1G16610.2 (arginine/serine-rich 45 )

HSP 1 Score: 402.5 bits (1033), Expect = 4.1e-112
Identity = 289/427 (67.68%), Postives = 329/427 (77.05%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSDSRSSSRSRS-RSRSVSVSRSRSRSRSISSSSS 60
           MAKPSRGRRSP           S SGS SRSSSRSRS  S S S+SRSRSRSRS+SSSSS
Sbjct: 1   MAKPSRGRRSP-----------SVSGSSSRSSSRSRSGSSPSRSISRSRSRSRSLSSSSS 60

Query: 61  PSRSASSRSRSPPPQRKSPTETARRARASPPPAKRSSPPPRKPSPVRESLVLHIDALSRN 120
           PSRS SS SRSPP + KSP   ARR R+ PPP  + +  P K + V+ESLVLH+D+LSRN
Sbjct: 61  PSRSVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKKA-VQESLVLHVDSLSRN 120

Query: 121 VHEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNV 180
           V+E HL+EIF NFGEV++VE+AMDR VNLP+G+GYVEFK R+DAEKAQ+YMDGAQIDG V
Sbjct: 121 VNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGKV 180

Query: 181 IRARFTLPQRQKMPTPPRTVATAPKRDGPKPENVGADAEKDDMKRQREPSPRRKPPSPRR 240
           ++A FTLP RQK+ +PP+ V+ APKRD PK +N  ADAEKD   R+    PR +  SPRR
Sbjct: 181 VKATFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRR----PRER-LSPRR 240

Query: 241 RSPVARRGGSPRRQADSPRRRPDSPPRRRLESPFRR--DSPPRRRPASPMRGGRSPSPLA 300
           RSP+ RRG SPR      RR PDSP RRR  SP RR  D+PPRRRPASP RG    SP  
Sbjct: 241 RSPLPRRGLSPR------RRSPDSPHRRRPGSPIRRRGDTPPRRRPASPSRGRSPSSPPP 300

Query: 301 RRHRSPPRPSPRRIRGSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRRSRSPIRRPAR 360
           RR+RSPPR SPRRIRGSPVRRRSP P RRR+ PPRR RSPPRRSP +RRRSRSPIRRP R
Sbjct: 301 RRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIRRPGR 360

Query: 361 SRSRSFSPRRGRPGAAGRRGRSSSYSASPSPRKVARRV--SRSPRRPLRG-RSSSRSSSS 420
           SRS S SPR+GR G AGRRGRSSSYS+SPSPR++ R++  SRSP+RPLRG RSSS SSSS
Sbjct: 361 SRSSSISPRKGR-GPAGRRGRSSSYSSSPSPRRIPRKISRSRSPKRPLRGKRSSSNSSSS 402

[Close]

BLAST of Lag0037652 vs. TAIR 10
Match: AT1G16610.3 (arginine/serine-rich 45 )

HSP 1 Score: 401.7 bits (1031), Expect = 7.0e-112
Identity = 292/439 (66.51%), Postives = 332/439 (75.63%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSDSRSSSRSRS-RSRSVSVSRSRSRSRSISSSSS 60
           MAKPSRGRRSP           S SGS SRSSSRSRS  S S S+SRSRSRSRS+SSSSS
Sbjct: 1   MAKPSRGRRSP-----------SVSGSSSRSSSRSRSGSSPSRSISRSRSRSRSLSSSSS 60

Query: 61  PSRSASSRSRSPPPQRKSPTETARRARASPPPAKRSSPPPRKPSPVRESLVLHIDALSRN 120
           PSRS SS SRSPP + KSP   ARR R+ PPP  + +  P K + V+ESLVLH+D+LSRN
Sbjct: 61  PSRSVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKKA-VQESLVLHVDSLSRN 120

Query: 121 VHEGHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNV 180
           V+E HL+EIF NFGEV++VE+AMDR VNLP+G+GYVEFK R+DAEKAQ+YMDGAQIDG V
Sbjct: 121 VNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGKV 180

Query: 181 IRARFTLPQRQKMPTPPRTVATAPKRDGPKPENVGADAEKD-DMKRQREPSPRRKPP-SP 240
           ++A FTLP RQK+ +PP+ V+ APKRD PK +N  ADAEKD   +R RE SP+RK   SP
Sbjct: 181 VKATFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRRPRETSPQRKTGLSP 240

Query: 241 RRRSPVARRGGSPRRQADSPRRRPDSPPRRRLESPFRR--DSPPRRRPASPMRGGRSPSP 300
           RRRSP+ RRG SPR      RR PDSP RRR  SP RR  D+PPRRRPASP RG    SP
Sbjct: 241 RRRSPLPRRGLSPR------RRSPDSPHRRRPGSPIRRRGDTPPRRRPASPSRGRSPSSP 300

Query: 301 LARRHRSPPRPSPRRIRGSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRRSRSPIRRP 360
             RR+RSPPR SPRRIRGSPVRRRSP P RRR+ PPRR RSPPRRSP +RRRSRSPIRRP
Sbjct: 301 PPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIRRP 360

Query: 361 ARSRSRSFSPRR----------GRPGAAGRRGRSSSYSASPSPRKVARRV--SRSPRRPL 420
            RSRS S SPR+          G  G AGRRGRSSSYS+SPSPR++ R++  SRSP+RPL
Sbjct: 361 GRSRSSSISPRKYVGTHLNFFLGGRGPAGRRGRSSSYSSSPSPRRIPRKISRSRSPKRPL 420

The following BLAST results are available for this feature:

BLAST of Lag0037652 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740559.1	3.8e-192	96.44	serine/arginine-rich splicing factor SR45 [Cucumis sativus] >KAE8649784.1 hypoth...	[more]
XP_038899577.1	5.4e-191	95.71	serine/arginine-rich splicing factor SR45-like [Benincasa hispida]	[more]
XP_008465435.1	1.7e-189	95.72	PREDICTED: serine/arginine-rich splicing factor SR45 [Cucumis melo]	[more]
XP_022136031.1	8.1e-187	94.80	serine/arginine-rich splicing factor SR45 isoform X2 [Momordica charantia]	[more]
XP_023525494.1	2.6e-185	94.29	serine/arginine-rich splicing factor SR45-like isoform X2 [Cucurbita pepo subsp....	[more]

BLAST of Lag0037652 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEE9	6.2e-113	68.30	Serine/arginine-rich splicing factor SR45 OS=Arabidopsis thaliana OX=3702 GN=SR4...	[more]
Q28E41	1.4e-19	43.08	RNA-binding protein with serine-rich domain 1 OS=Xenopus tropicalis OX=8364 GN=r...	[more]
Q15287	5.2e-19	42.31	RNA-binding protein with serine-rich domain 1 OS=Homo sapiens OX=9606 GN=RNPS1 P...	[more]
Q4R5N1	5.2e-19	42.31	RNA-binding protein with serine-rich domain 1 OS=Macaca fascicularis OX=9541 GN=...	[more]
Q99M28	5.2e-19	42.31	RNA-binding protein with serine-rich domain 1 OS=Mus musculus OX=10090 GN=Rnps1 ...	[more]

BLAST of Lag0037652 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZM9	4.8e-193	96.67	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G607050 PE=4 SV...	[more]
A0A1S3CPA3	8.5e-190	95.72	serine/arginine-rich splicing factor SR45 OS=Cucumis melo OX=3656 GN=LOC10350304...	[more]
A0A6J1C2D4	3.9e-187	94.80	serine/arginine-rich splicing factor SR45 isoform X2 OS=Momordica charantia OX=3...	[more]
A0A6J1C2C4	2.8e-185	93.69	serine/arginine-rich splicing factor SR45 isoform X1 OS=Momordica charantia OX=3...	[more]
A0A6J1FJN7	2.8e-185	94.05	serine/arginine-rich splicing factor SR45-like isoform X2 OS=Cucurbita moschata ...	[more]

BLAST of Lag0037652 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16610.1	4.4e-114	68.30	arginine/serine-rich 45	[more]
AT1G16610.2	4.1e-112	67.68	arginine/serine-rich 45	[more]
AT1G16610.3	7.0e-112	66.51	arginine/serine-rich 45	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 110..183 e-value: 1.2E-18 score: 77.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 113..181 e-value: 2.1E-14 score: 53.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 109..187 score: 16.005526
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 6..193 e-value: 5.2E-23 score: 83.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 404..420
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..420
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 302..363
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..106
None	No IPR available	PANTHER	PTHR15481:SF9	BNAA09G56240D PROTEIN	coord: 23..412
None	No IPR available	PANTHER	PTHR15481	RIBONUCLEIC ACID BINDING PROTEIN S1	coord: 23..412
IPR034201	RNPS1, RNA recognition motif	CDD	cd12365	RRM_RNPS1	coord: 111..183 e-value: 9.29168E-38 score: 129.598
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 92..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0037652.1	Lag0037652.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding