Lag0037650 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0037650
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Trypsin family protein
Location	chr2: 8039984 .. 8040481 (+)
RNA-Seq Expression	Lag0037650
Synteny	Lag0037650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAGACTAGACACAATAGCAGGATTAACTGCTCTGGTTCGTCGGAGGAATCAGCTCTGAATCTTGAAAGAAATTGCTGCAGTCACTCTAATTTACCTTCCCTCAGCCCACCTACACTTCAGCCGTTCGCATCTGCTGGACAGCATTGTGAGAGCACGAGCAATGCTGCTTACTTTTCATGGCCCACCCCTATTCGAATAAGCATTGCTGCCGAGGAGAGGGCAAATTATTTCGCAAATCTTCAGAAAGGGCTACCAGATATCCATCATCCGGTACCAAATGGGCAGCGGGCAACCACATTACTCGAGCTCATGACCATAAGAGCCTTCCACAGCAAGATCCTGCGTTGTTACAGTCTAGGAACGGCAATTGGATTCCGTATCCGAAAGGGCGTGCTGACTGACATTCCTGCTATTCTTGTTTTTGTTTCCAGGAAAGTTCATAAGCAATGGCTTAGTCCTATCCAATGCCTGCCCACTGCCCTGGAGGTCTGA

mRNA sequence

ATGGAGCAGACTAGACACAATAGCAGGATTAACTGCTCTGGTTCGTCGGAGGAATCAGCTCTGAATCTTGAAAGAAATTGCTGCAGTCACTCTAATTTACCTTCCCTCAGCCCACCTACACTTCAGCCGTTCGCATCTGCTGGACAGCATTGTGAGAGCACGAGCAATGCTGCTTACTTTTCATGGCCCACCCCTATTCGAATAAGCATTGCTGCCGAGGAGAGGGCAAATTATTTCGCAAATCTTCAGAAAGGGCTACCAGATATCCATCATCCGGTACCAAATGGGCAGCGGGCAACCACATTACTCGAGCTCATGACCATAAGAGCCTTCCACAGCAAGATCCTGCGTTGTTACAGTCTAGGAACGGCAATTGGATTCCGTATCCGAAAGGGCGTGCTGACTGACATTCCTGCTATTCTTGTTTTTGTTTCCAGGAAAGTTCATAAGCAATGGCTTAGTCCTATCCAATGCCTGCCCACTGCCCTGGAGGTCTGA

Coding sequence (CDS)

ATGGAGCAGACTAGACACAATAGCAGGATTAACTGCTCTGGTTCGTCGGAGGAATCAGCTCTGAATCTTGAAAGAAATTGCTGCAGTCACTCTAATTTACCTTCCCTCAGCCCACCTACACTTCAGCCGTTCGCATCTGCTGGACAGCATTGTGAGAGCACGAGCAATGCTGCTTACTTTTCATGGCCCACCCCTATTCGAATAAGCATTGCTGCCGAGGAGAGGGCAAATTATTTCGCAAATCTTCAGAAAGGGCTACCAGATATCCATCATCCGGTACCAAATGGGCAGCGGGCAACCACATTACTCGAGCTCATGACCATAAGAGCCTTCCACAGCAAGATCCTGCGTTGTTACAGTCTAGGAACGGCAATTGGATTCCGTATCCGAAAGGGCGTGCTGACTGACATTCCTGCTATTCTTGTTTTTGTTTCCAGGAAAGTTCATAAGCAATGGCTTAGTCCTATCCAATGCCTGCCCACTGCCCTGGAGGTCTGA

Protein sequence

MEQTRHNSRINCSGSSEESALNLERNCCSHSNLPSLSPPTLQPFASAGQHCESTSNAAYFSWPTPIRISIAAEERANYFANLQKGLPDIHHPVPNGQRATTLLELMTIRAFHSKILRCYSLGTAIGFRIRKGVLTDIPAILVFVSRKVHKQWLSPIQCLPTALEV

Homology

[Close]

BLAST of Lag0037650 vs. NCBI nr
Match: XP_022136089.1 (uncharacterized protein LOC111007860 isoform X2 [Momordica charantia])

HSP 1 Score: 303.9 bits (777), Expect = 8.4e-79
Identity = 154/167 (92.22%), Postives = 158/167 (94.61%), Query Frame = 0


Query: 1   MEQTRHNSRINCSGS--SEESALNLERNCCSHSNLPSLSPPTLQPFASAGQHCESTSNAA 60
           MEQTRHN RINCSGS  SEESAL+LERNCCSHSNLPS SPPTLQPFASAGQHCE  SNAA
Sbjct: 1   MEQTRHNGRINCSGSTPSEESALDLERNCCSHSNLPSFSPPTLQPFASAGQHCE--SNAA 60

Query: 61  YFSWPTPIRISIAAEERANYFANLQKG-LPDIHHPVPNGQRATTLLELMTIRAFHSKILR 120
           YFSWPTPIR+S+AAEERANYFANLQKG LPDI HP+P GQRATTLLELMTIRAFHSKILR
Sbjct: 61  YFSWPTPIRLSVAAEERANYFANLQKGVLPDILHPLPKGQRATTLLELMTIRAFHSKILR 120

Query: 121 CYSLGTAIGFRIRKGVLTDIPAILVFVSRKVHKQWLSPIQCLPTALE 165
           CYSLGTAIGFRIRKGVLTDIPAILVFVSRKVHKQWLSPIQCLPTALE
Sbjct: 121 CYSLGTAIGFRIRKGVLTDIPAILVFVSRKVHKQWLSPIQCLPTALE 165

[Close]

BLAST of Lag0037650 vs. NCBI nr
Match: XP_022136083.1 (uncharacterized protein LOC111007860 isoform X1 [Momordica charantia])

HSP 1 Score: 303.9 bits (777), Expect = 8.4e-79
Identity = 154/167 (92.22%), Postives = 158/167 (94.61%), Query Frame = 0


Query: 1   MEQTRHNSRINCSGS--SEESALNLERNCCSHSNLPSLSPPTLQPFASAGQHCESTSNAA 60
           MEQTRHN RINCSGS  SEESAL+LERNCCSHSNLPS SPPTLQPFASAGQHCE  SNAA
Sbjct: 1   MEQTRHNGRINCSGSTPSEESALDLERNCCSHSNLPSFSPPTLQPFASAGQHCE--SNAA 60

Query: 61  YFSWPTPIRISIAAEERANYFANLQKG-LPDIHHPVPNGQRATTLLELMTIRAFHSKILR 120
           YFSWPTPIR+S+AAEERANYFANLQKG LPDI HP+P GQRATTLLELMTIRAFHSKILR
Sbjct: 61  YFSWPTPIRLSVAAEERANYFANLQKGVLPDILHPLPKGQRATTLLELMTIRAFHSKILR 120

Query: 121 CYSLGTAIGFRIRKGVLTDIPAILVFVSRKVHKQWLSPIQCLPTALE 165
           CYSLGTAIGFRIRKGVLTDIPAILVFVSRKVHKQWLSPIQCLPTALE
Sbjct: 121 CYSLGTAIGFRIRKGVLTDIPAILVFVSRKVHKQWLSPIQCLPTALE 165

[Close]

BLAST of Lag0037650 vs. NCBI nr
Match: XP_022981089.1 (uncharacterized protein LOC111480347 [Cucurbita maxima] >XP_023524995.1 uncharacterized protein LOC111788750 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298.1 bits (762), Expect = 4.6e-77
Identity = 152/167 (91.02%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 1   MEQTRHNSRINCSGS--SEESALNLERNCCSHSNLPSLSPPTLQPFASAGQHCESTSNAA 60
           MEQTRHNSRINCSGS  SEESAL+LERNC  HSNLPS SPPTLQPFASAGQHCE  SNAA
Sbjct: 1   MEQTRHNSRINCSGSTPSEESALDLERNCYGHSNLPSFSPPTLQPFASAGQHCE--SNAA 60

Query: 61  YFSWPTPIRISIAAEERANYFANLQKG-LPDIHHPVPNGQRATTLLELMTIRAFHSKILR 120
           YFSWPTPIR+S+AAEERANYFANLQKG LPDI HP+P GQRATTLLELMTIRAFHSKILR
Sbjct: 61  YFSWPTPIRLSVAAEERANYFANLQKGVLPDILHPLPKGQRATTLLELMTIRAFHSKILR 120

Query: 121 CYSLGTAIGFRIRKGVLTDIPAILVFVSRKVHKQWLSPIQCLPTALE 165
           CYSLGTAIGFRI+KGVLTDIPAILVFVSRKVHKQWLSPIQCLPTALE
Sbjct: 121 CYSLGTAIGFRIQKGVLTDIPAILVFVSRKVHKQWLSPIQCLPTALE 165

[Close]

BLAST of Lag0037650 vs. NCBI nr
Match: XP_022940289.1 (uncharacterized protein LOC111445958 [Cucurbita moschata])

HSP 1 Score: 298.1 bits (762), Expect = 4.6e-77
Identity = 152/167 (91.02%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 1   MEQTRHNSRINCSGS--SEESALNLERNCCSHSNLPSLSPPTLQPFASAGQHCESTSNAA 60
           MEQTRHNSRINCSGS  SEESAL+LERNC  HSNLPS SPPTLQPFASAGQHCE  SNAA
Sbjct: 1   MEQTRHNSRINCSGSTPSEESALDLERNCYGHSNLPSFSPPTLQPFASAGQHCE--SNAA 60

Query: 61  YFSWPTPIRISIAAEERANYFANLQKG-LPDIHHPVPNGQRATTLLELMTIRAFHSKILR 120
           YFSWPTPIR+S+AAEERANYFANLQKG LPDI HP+P GQRATTLLELMTIRAFHSKILR
Sbjct: 61  YFSWPTPIRLSVAAEERANYFANLQKGVLPDILHPLPKGQRATTLLELMTIRAFHSKILR 120

Query: 121 CYSLGTAIGFRIRKGVLTDIPAILVFVSRKVHKQWLSPIQCLPTALE 165
           CYSLGTAIGFRI+KGVLTDIPAILVFVSRKVHKQWLSPIQCLPTALE
Sbjct: 121 CYSLGTAIGFRIQKGVLTDIPAILVFVSRKVHKQWLSPIQCLPTALE 165

[Close]

BLAST of Lag0037650 vs. NCBI nr
Match: KAG7037486.1 (hypothetical protein SDJN02_01113, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 295.0 bits (754), Expect = 3.9e-76
Identity = 151/167 (90.42%), Postives = 156/167 (93.41%), Query Frame = 0


Query: 1   MEQTRHNSRINCSGS--SEESALNLERNCCSHSNLPSLSPPTLQPFASAGQHCESTSNAA 60
           MEQTRHNSRINCSGS  SEESAL+LERNC  HSNLPS SPPTLQPFASAGQHCE  SNAA
Sbjct: 5   MEQTRHNSRINCSGSTPSEESALDLERNCYGHSNLPSFSPPTLQPFASAGQHCE--SNAA 64

Query: 61  YFSWPTPIRISIAAEERANYFANLQKG-LPDIHHPVPNGQRATTLLELMTIRAFHSKILR 120
           YFSWPTPIR+S+AAEERANYFANLQKG LPDI  P+P GQRATTLLELMTIRAFHSKILR
Sbjct: 65  YFSWPTPIRLSVAAEERANYFANLQKGVLPDILRPLPKGQRATTLLELMTIRAFHSKILR 124

Query: 121 CYSLGTAIGFRIRKGVLTDIPAILVFVSRKVHKQWLSPIQCLPTALE 165
           CYSLGTAIGFRI+KGVLTDIPAILVFVSRKVHKQWLSPIQCLPTALE
Sbjct: 125 CYSLGTAIGFRIQKGVLTDIPAILVFVSRKVHKQWLSPIQCLPTALE 169

[Close]

BLAST of Lag0037650 vs. ExPASy Swiss-Prot
Match: B4XT64 (Protein NARROW LEAF 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NAL1 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.6e-40
Identity = 94/166 (56.63%), Postives = 118/166 (71.08%), Query Frame = 0


Query: 1   MEQTRHNSRINCSGSSEESALNLERNCCSHSNLPSLSPPTLQPFASAGQHCESTSNAAYF 60
           M+ +   ++++    SEES+L+++     H + P    P++QP AS   H E  ++AAYF
Sbjct: 1   MKPSDDKAQLSGLAQSEESSLDVD-----HQSFP--CSPSIQPVASGCTHTE--NSAAYF 60

Query: 61  SWPTPIRISIAAEERANYFANLQKGLPDIHHP--VPNGQRATTLLELMTIRAFHSKILRC 120
            WPT      AAE RANYF NLQKGL    HP  +P GQ+A +LL+LMTIRAFHSKILR 
Sbjct: 61  LWPTSNLQHCAAEGRANYFGNLQKGLLP-RHPGRLPKGQQANSLLDLMTIRAFHSKILRR 120

Query: 121 YSLGTAIGFRIRKGVLTDIPAILVFVSRKVHKQWLSPIQCLPTALE 165
           +SLGTA+GFRIRKG LTDIPAILVFV+RKVHK+WL+P QCLP  LE
Sbjct: 121 FSLGTAVGFRIRKGDLTDIPAILVFVARKVHKKWLNPAQCLPAILE 156

The following BLAST results are available for this feature:

BLAST of Lag0037650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136089.1	8.4e-79	92.22	uncharacterized protein LOC111007860 isoform X2 [Momordica charantia]	[more]
XP_022136083.1	8.4e-79	92.22	uncharacterized protein LOC111007860 isoform X1 [Momordica charantia]	[more]
XP_022981089.1	4.6e-77	91.02	uncharacterized protein LOC111480347 [Cucurbita maxima] >XP_023524995.1 uncharac...	[more]
XP_022940289.1	4.6e-77	91.02	uncharacterized protein LOC111445958 [Cucurbita moschata]	[more]
KAG7037486.1	3.9e-76	90.42	hypothetical protein SDJN02_01113, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Lag0037650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B4XT64	3.6e-40	56.63	Protein NARROW LEAF 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NAL1 PE=1 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31521	EXPRESSED PROTEIN	coord: 1..164
None	No IPR available	PANTHER	PTHR31521:SF3	BNAA01G30180D PROTEIN	coord: 1..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0037650.1	Lag0037650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0043231	intracellular membrane-bounded organelle