Lag0037562 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0037562
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Transposon TX1 uncharacterized 149 kDa protein
Location	chr2: 7282001 .. 7282801 (+)
RNA-Seq Expression	Lag0037562
Synteny	Lag0037562

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCTAAAAATGGAGTTTGCTGAGGTGATTAGAAAAGAAAATAGTAGTTGGAGGCAAAAGGCTAAGGTTAATTGGGCCAAGGATGGAGATTGTAATATAACTTTCTTTCATCGTGTTGCTAGTGGTCGGAGAAGTAGGAATATTATTAATTCTCTAATCTCTTCGGAAGGAAATGTGTTGAAAGAGGCCAAGGCCGTAGAGGATGAAATTCTTTCTTATTTCTCGAGTTTGTATGGTCCTCCGGTGGTGGACAGACCGTTTGTGGAAGGTATCGATTGGTGTCCCATTTCTGAGTCTGATCTGAGAGTGTTGGAGGCCCATTTCACCTTAGAAGAGATTAAGCAAGCGGTGTTTGATTGTGATAAAAACAAATCCCCAGGCCCTGACGGTTTTTCTATGGGTTTTTTCCAGTCTAAGTGGGAGGAAATTAAATCCGATCTGGAGCGAGTGTTTAAGGAATTTCACGAGAGGGGCATTATCGATAGATCCATGAATAAAACTTTCGTATGTCTTATTCCTAAGAAAGATAGGGCAGGGAAGGTCAGTAACTTTAGACCCATCAGTCTAGTCACAAGTATGTAAAAGATTATTGCTAAAGTAATGGCTAATAGGCTTCGGAGGGTTCTTCCCTCTACCGTTTCGGAATCCCAAGGAGCGTTCATTGCAGGGAGACAAATCTTGGATCAGGTTCTTATAGCTAATGTAGCCATTGAGGAGTATAGGAGTGATACGAAGGAGGAATCATCTTTAAGATTGATTTTGAGAAAGCCTATGACCATGTTGACTGGAATTTTCTAG

mRNA sequence

ATGAGCCTAAAAATGGAGTTTGCTGAGGTGATTAGAAAAGAAAATAGTAGTTGGAGGCAAAAGGCTAAGGTTAATTGGGCCAAGGATGGAGATTGTAATATAACTTTCTTTCATCGTGTTGCTAGTGGTCGGAGAAGTAGGAATATTATTAATTCTCTAATCTCTTCGGAAGGAAATGTGTTGAAAGAGGCCAAGGCCGTAGAGGATGAAATTCTTTCTTATTTCTCGAGTTTGTATGGTCCTCCGGTGGTGGACAGACCGTTTGTGGAAGGTATCGATTGGTGTCCCATTTCTGAGTCTGATCTGAGAGTGTTGGAGGCCCATTTCACCTTAGAAGAGATTAAGCAAGCGGTGTTTGATTGTGATAAAAACAAATCCCCAGGCCCTGACGGTTTTTCTATGGGTTTTTTCCAGTCTAAGTGGGAGGAAATTAAATCCGATCTGGAGCGAGTGTTTAAGGAATTTCACGAGAGGGGCATTATCGATAGATCCATGAATAAAACTTTCGTATGTCTTATTCCTAAGAAAGATAGGGCAGGGAAGGTCAGTAACTTTAGACCCATCAGTCTAGTCACAAGGAGACAAATCTTGGATCAGGTTCTTATAGCTAATGTAGCCATTGAGGAGTATAGGAGTGATACGAAGGAGGAATCATCTTTAAGATTGATTTTGAGAAAGCCTATGACCATGTTGACTGGAATTTTCTAG

Coding sequence (CDS)

ATGAGCCTAAAAATGGAGTTTGCTGAGGTGATTAGAAAAGAAAATAGTAGTTGGAGGCAAAAGGCTAAGGTTAATTGGGCCAAGGATGGAGATTGTAATATAACTTTCTTTCATCGTGTTGCTAGTGGTCGGAGAAGTAGGAATATTATTAATTCTCTAATCTCTTCGGAAGGAAATGTGTTGAAAGAGGCCAAGGCCGTAGAGGATGAAATTCTTTCTTATTTCTCGAGTTTGTATGGTCCTCCGGTGGTGGACAGACCGTTTGTGGAAGGTATCGATTGGTGTCCCATTTCTGAGTCTGATCTGAGAGTGTTGGAGGCCCATTTCACCTTAGAAGAGATTAAGCAAGCGGTGTTTGATTGTGATAAAAACAAATCCCCAGGCCCTGACGGTTTTTCTATGGGTTTTTTCCAGTCTAAGTGGGAGGAAATTAAATCCGATCTGGAGCGAGTGTTTAAGGAATTTCACGAGAGGGGCATTATCGATAGATCCATGAATAAAACTTTCGTATGTCTTATTCCTAAGAAAGATAGGGCAGGGAAGGTCAGTAACTTTAGACCCATCAGTCTAGTCACAAGGAGACAAATCTTGGATCAGGTTCTTATAGCTAATGTAGCCATTGAGGAGTATAGGAGTGATACGAAGGAGGAATCATCTTTAAGATTGATTTTGAGAAAGCCTATGACCATGTTGACTGGAATTTTCTAG

Protein sequence

MSLKMEFAEVIRKENSSWRQKAKVNWAKDGDCNITFFHRVASGRRSRNIINSLISSEGNVLKEAKAVEDEILSYFSSLYGPPVVDRPFVEGIDWCPISESDLRVLEAHFTLEEIKQAVFDCDKNKSPGPDGFSMGFFQSKWEEIKSDLERVFKEFHERGIIDRSMNKTFVCLIPKKDRAGKVSNFRPISLVTRRQILDQVLIANVAIEEYRSDTKEESSLRLILRKPMTMLTGIF

Homology

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BLAST of Lag0037562 vs. NCBI nr
Match: RVW33934.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 216.1 bits (549), Expect = 3.3e-52
Identity = 113/247 (45.75%), Postives = 149/247 (60.32%), Query Frame = 0


Query: 1   MSLKMEFAEVIRKENSSWRQKAKVNWAKDGDCNITFFHRVASGRRSRNIINSLISSEGNV 60
           +S K E  E+I +E   WRQKAKV W K+GDCN  F+H+VA+GRR+R  I  L +  G V
Sbjct: 142 VSRKGELEELILREEIHWRQKAKVKWVKEGDCNSKFYHKVANGRRNRKYIKELENERGLV 201

Query: 61  LKEAKAVEDEILSYFSSLYGPPVVDRPFVEGIDWCPISESDLRVLEAHFTLEEIKQAVFD 120
           LK A+++ +EIL YF  LY  P  +   VEG+DW PISE     LE+ FT EEI +A+F 
Sbjct: 202 LKNAESITEEILHYFEKLYTNPTGESWGVEGLDWSPISEESALRLESPFTEEEISKAIFQ 261

Query: 121 CDKNKSPGPDGFSMGFFQSKWEEIKSDLERVFKEFHERGIIDRSMNKTFVCLIPKKDRAG 180
            D++K+PGPDGF++  FQ  W+ IK DL RVF EFH  GII++S N +F+ LIPKK  + 
Sbjct: 262 LDRDKAPGPDGFTIAVFQECWDVIKEDLVRVFAEFHRSGIINQSTNASFIVLIPKKSLSK 321

Query: 181 KVSNFRPISLVTR-------------------------------RQILDQVLIANVAIEE 217
           ++S+FRPISL+T                                RQILD VLIAN  ++E
Sbjct: 322 RISDFRPISLITSLYKIIAKVFSGRLRGVLHETIHYTQGAFVQGRQILDAVLIANEIVDE 381

[Close]

BLAST of Lag0037562 vs. NCBI nr
Match: RVW16209.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 215.7 bits (548), Expect = 4.3e-52
Identity = 112/244 (45.90%), Postives = 147/244 (60.25%), Query Frame = 0


Query: 4   KMEFAEVIRKENSSWRQKAKVNWAKDGDCNITFFHRVASGRRSRNIINSLISSEGNVLKE 63
           K E  E+I +E   WRQKAKV W K+GDCN  F+H+VA+GRR+R  I  L +  G VLK 
Sbjct: 351 KRELEELILREEIHWRQKAKVKWVKEGDCNSKFYHKVANGRRNRKYIKELENERGLVLKN 410

Query: 64  AKAVEDEILSYFSSLYGPPVVDRPFVEGIDWCPISESDLRVLEAHFTLEEIKQAVFDCDK 123
           A+++ +EIL YF  LY  P  +   VEG+DW PISE     LE+ FT EEI +A+F  D+
Sbjct: 411 AESITEEILHYFEKLYTNPTGESWGVEGLDWSPISEESALRLESPFTEEEISKAIFQLDR 470

Query: 124 NKSPGPDGFSMGFFQSKWEEIKSDLERVFKEFHERGIIDRSMNKTFVCLIPKKDRAGKVS 183
           +K+PGPDGF++  FQ  W+ IK DL RVF EFH  GII++S N +F+ LIPKK  + ++S
Sbjct: 471 DKAPGPDGFTIAVFQECWDVIKEDLVRVFAEFHRSGIINQSTNASFIVLIPKKSLSKRIS 530

Query: 184 NFRPISLVTR-------------------------------RQILDQVLIANVAIEEYRS 217
           +FRPISL+T                                RQILD VLIAN  ++E R 
Sbjct: 531 DFRPISLITSLYKIIAKVLSGRLRGVLHETIHYTQGAFVQGRQILDAVLIANEIVDERRR 590

[Close]

BLAST of Lag0037562 vs. NCBI nr
Match: RVW22252.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 214.5 bits (545), Expect = 9.5e-52
Identity = 112/246 (45.53%), Postives = 148/246 (60.16%), Query Frame = 0


Query: 2   SLKMEFAEVIRKENSSWRQKAKVNWAKDGDCNITFFHRVASGRRSRNIINSLISSEGNVL 61
           S K E  E+I +E   WRQKAKV W K+GDCN  F+H+VA+GRR+R  I  L +  G VL
Sbjct: 358 SRKGELEELILREEIHWRQKAKVKWVKEGDCNSKFYHKVANGRRNRKYIKELENERGLVL 417

Query: 62  KEAKAVEDEILSYFSSLYGPPVVDRPFVEGIDWCPISESDLRVLEAHFTLEEIKQAVFDC 121
           K A+++ +EIL YF  LY  P  +   VEG+DW PISE     L++ FT EEI +A+F  
Sbjct: 418 KNAESITEEILHYFEKLYTNPTGESWGVEGLDWSPISEESALRLDSPFTEEEISKAIFQL 477

Query: 122 DKNKSPGPDGFSMGFFQSKWEEIKSDLERVFKEFHERGIIDRSMNKTFVCLIPKKDRAGK 181
           D++K+PGPDGF++  FQ  W+ IK DL RVF EFH  GII++S N +F+ LIPKK  + +
Sbjct: 478 DRDKAPGPDGFTIAVFQECWDVIKEDLVRVFAEFHRSGIINQSTNASFIVLIPKKSLSKR 537

Query: 182 VSNFRPISLVTR-------------------------------RQILDQVLIANVAIEEY 217
           +S+FRPISL+T                                RQILD VLIAN  ++E 
Sbjct: 538 ISDFRPISLITSLYKIIAKVLSGRLRGVLHETIHYTQGAFVQGRQILDAVLIANEIVDER 597

[Close]

BLAST of Lag0037562 vs. NCBI nr
Match: RVW51280.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 214.5 bits (545), Expect = 9.5e-52
Identity = 112/246 (45.53%), Postives = 148/246 (60.16%), Query Frame = 0


Query: 2   SLKMEFAEVIRKENSSWRQKAKVNWAKDGDCNITFFHRVASGRRSRNIINSLISSEGNVL 61
           S K E  E+I +E   WRQKAKV W K+GDCN  F+H+VA+GRR+R  I  L +  G VL
Sbjct: 250 SRKGELEELILREEIHWRQKAKVKWVKEGDCNSKFYHKVANGRRNRKYIKELENERGLVL 309

Query: 62  KEAKAVEDEILSYFSSLYGPPVVDRPFVEGIDWCPISESDLRVLEAHFTLEEIKQAVFDC 121
           K A+++ +EIL YF  LY  P  +   VEG+DW PISE     L++ FT EEI +A+F  
Sbjct: 310 KNAESITEEILHYFEKLYTNPTGESWGVEGLDWSPISEESALRLDSPFTEEEISKAIFQL 369

Query: 122 DKNKSPGPDGFSMGFFQSKWEEIKSDLERVFKEFHERGIIDRSMNKTFVCLIPKKDRAGK 181
           D++K+PGPDGF++  FQ  W+ IK DL RVF EFH  GII++S N +F+ LIPKK  + +
Sbjct: 370 DRDKAPGPDGFTIAVFQECWDVIKEDLVRVFAEFHRSGIINQSTNASFIVLIPKKSLSKR 429

Query: 182 VSNFRPISLVTR-------------------------------RQILDQVLIANVAIEEY 217
           +S+FRPISL+T                                RQILD VLIAN  ++E 
Sbjct: 430 ISDFRPISLITSLYKIIAKVLSGRLRGVLHETIHYTQGAFVQGRQILDAVLIANEIVDER 489

[Close]

BLAST of Lag0037562 vs. NCBI nr
Match: RVW34407.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 214.5 bits (545), Expect = 9.5e-52
Identity = 112/246 (45.53%), Postives = 148/246 (60.16%), Query Frame = 0


Query: 2   SLKMEFAEVIRKENSSWRQKAKVNWAKDGDCNITFFHRVASGRRSRNIINSLISSEGNVL 61
           S K E  E+I +E   WRQKAKV W K+GDCN  F+H+VA+GRR+R  I  L +  G VL
Sbjct: 328 SRKGELEELILREEIHWRQKAKVKWVKEGDCNSKFYHKVANGRRNRKYIKELENERGLVL 387

Query: 62  KEAKAVEDEILSYFSSLYGPPVVDRPFVEGIDWCPISESDLRVLEAHFTLEEIKQAVFDC 121
           K A+++ +EIL YF  LY  P  +   VEG+DW PISE     L++ FT EEI +A+F  
Sbjct: 388 KNAESITEEILHYFEKLYTNPTGESWGVEGLDWSPISEESALRLDSPFTEEEISKAIFQL 447

Query: 122 DKNKSPGPDGFSMGFFQSKWEEIKSDLERVFKEFHERGIIDRSMNKTFVCLIPKKDRAGK 181
           D++K+PGPDGF++  FQ  W+ IK DL RVF EFH  GII++S N +F+ LIPKK  + +
Sbjct: 448 DRDKAPGPDGFTIAVFQECWDVIKEDLVRVFAEFHRSGIINQSTNASFIVLIPKKSLSKR 507

Query: 182 VSNFRPISLVTR-------------------------------RQILDQVLIANVAIEEY 217
           +S+FRPISL+T                                RQILD VLIAN  ++E 
Sbjct: 508 ISDFRPISLITSLYKIIAKVLSGRLRGVLHETIHYTQGAFVQGRQILDAVLIANEIVDER 567

[Close]

BLAST of Lag0037562 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.5e-18
Identity = 61/202 (30.20%), Postives = 103/202 (50.99%), Query Frame = 0


Query: 2   SLKMEFAEVIRKE---NSSWRQ------KAKVNWAKDGDCNITFFHRVASGRRSRNIINS 61
           +L+ E+ E  RKE   N   RQ      ++++    D D    FF+ +   + +R  I  
Sbjct: 333 ALQCEYLE--RKEALRNMEQRQARGAFVRSRMQLLCDMDRGSRFFYALEKKKGNRKQITC 392

Query: 62  LISSEGNVLKEAKAVEDEILSYFSSLYGPPVVDRPFVEGI-DWCP-ISESDLRVLEAHFT 121
           L + +G  L++ +A+ D   S++ +L+ P  +     E + D  P +SE     LE   T
Sbjct: 393 LFAEDGTPLEDPEAIRDRARSFYQNLFSPDPISPDACEELWDGLPVVSERRKERLETPIT 452

Query: 122 LEEIKQAVFDCDKNKSPGPDGFSMGFFQSKWEEIKSDLERVFKEFHERGIIDRSMNKTFV 181
           L+E+ QA+     NKSPG DG ++ FFQ  W+ +  D  RV  E  ++G +  S  +  +
Sbjct: 453 LDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVL 512

Query: 182 CLIPKKDRAGKVSNFRPISLVT 193
            L+PKK     + N+RP+SL++
Sbjct: 513 SLLPKKGDLRLIKNWRPVSLLS 532

[Close]

BLAST of Lag0037562 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 6.3e-14
Identity = 45/169 (26.63%), Postives = 90/169 (53.25%), Query Frame = 0


Query: 39  RVASGRRSRNIINSLISSEGNVLKEAKAVEDEILSYFSSLYGPPVVD----RPFVEGIDW 98
           R+  G R + +IN + + +G++  + + +++ I S++  LY   + +      F++    
Sbjct: 386 RLTKGHRDKILINKIRNEKGDITTDPEEIQNTIRSFYKRLYSTKLENLDEMDKFLDRYQV 445

Query: 99  CPISESDLRVLEAHFTLEEIKQAVFDCDKNKSPGPDGFSMGFFQSKWEEIKSDLERVFKE 158
             +++  +  L +  + +EI+  +      KSPGPDGFS  F+Q+  E++   L ++F +
Sbjct: 446 PKLNQDQVDHLNSPISPKEIEAVINSLPTKKSPGPDGFSAEFYQTFKEDLIPILHKLFHK 505

Query: 159 FHERGIIDRSMNKTFVCLIPKKDR-AGKVSNFRPISLVT-RRQILDQVL 202
               G +  S  +  + LIPK  +   K+ NFRPISL+    +IL+++L
Sbjct: 506 IEVEGTLPNSFYEATITLIPKPQKDPTKIENFRPISLMNIDAKILNKIL 554

[Close]

BLAST of Lag0037562 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.3e-13
Identity = 47/169 (27.81%), Postives = 86/169 (50.89%), Query Frame = 0


Query: 39  RVASGRRSRNIINSLISSEGNVLKEAKAVEDEILSYFSSLYGPPVVD----RPFVEGIDW 98
           R+   +R +N I+++ + +G++  +   ++  I  Y+  LY   + +      F++    
Sbjct: 379 RLIKKKREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTL 438

Query: 99  CPISESDLRVLEAHFTLEEIKQAVFDCDKNKSPGPDGFSMGFFQSKWEEIKSDLERVFKE 158
             +++ ++  L    T  EI   +      KSPGPDGF+  F+Q   EE+   L ++F+ 
Sbjct: 439 PRLNQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQS 498

Query: 159 FHERGIIDRSMNKTFVCLIPKKDR-AGKVSNFRPISLVT-RRQILDQVL 202
             + GI+  S  +  + LIPK  R   K  NFRPISL+    +IL+++L
Sbjct: 499 IEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKIL 547

[Close]

BLAST of Lag0037562 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-11
Identity = 45/166 (27.11%), Postives = 87/166 (52.41%), Query Frame = 0


Query: 44  RRSRNIINSLISSEGNVLKEAKAVEDEILSYFSSLYGPPV-----VDRPFVEGIDWCPIS 103
           +R +++I+S+ +    +  +   ++  +  Y+  LY         +D+ ++E      +S
Sbjct: 383 KRVKSLISSIRNGNDEITTDPSEIQKILNEYYKKLYSHKYENLKEIDQ-YLEACHLPRLS 442

Query: 104 ESDLRVLEAHFTLEEIKQAVFDCDKNKSPGPDGFSMGFFQSKWEEIKSDLERVFKEFHER 163
           + ++ +L    +  EI   + +  K KSPGPDGF+  F+Q+  EE+   L  +F+   + 
Sbjct: 443 QKEVEMLNRPISSSEIASTIQNLPKKKSPGPDGFTSEFYQTFKEELVPILLNLFQNIEKE 502

Query: 164 GIIDRSMNKTFVCLIPK--KDRAGKVSNFRPISLVT-RRQILDQVL 202
           GI+  +  +  + LIPK  KD   K  N+RPISL+    +IL+++L
Sbjct: 503 GILPNTFYEANITLIPKPGKDPTRK-ENYRPISLMNIDAKILNKIL 546

[Close]

BLAST of Lag0037562 vs. ExPASy TrEMBL
Match: A0A438DEL6 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_833 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.6e-52
Identity = 113/247 (45.75%), Postives = 149/247 (60.32%), Query Frame = 0


Query: 1   MSLKMEFAEVIRKENSSWRQKAKVNWAKDGDCNITFFHRVASGRRSRNIINSLISSEGNV 60
           +S K E  E+I +E   WRQKAKV W K+GDCN  F+H+VA+GRR+R  I  L +  G V
Sbjct: 142 VSRKGELEELILREEIHWRQKAKVKWVKEGDCNSKFYHKVANGRRNRKYIKELENERGLV 201

Query: 61  LKEAKAVEDEILSYFSSLYGPPVVDRPFVEGIDWCPISESDLRVLEAHFTLEEIKQAVFD 120
           LK A+++ +EIL YF  LY  P  +   VEG+DW PISE     LE+ FT EEI +A+F 
Sbjct: 202 LKNAESITEEILHYFEKLYTNPTGESWGVEGLDWSPISEESALRLESPFTEEEISKAIFQ 261

Query: 121 CDKNKSPGPDGFSMGFFQSKWEEIKSDLERVFKEFHERGIIDRSMNKTFVCLIPKKDRAG 180
            D++K+PGPDGF++  FQ  W+ IK DL RVF EFH  GII++S N +F+ LIPKK  + 
Sbjct: 262 LDRDKAPGPDGFTIAVFQECWDVIKEDLVRVFAEFHRSGIINQSTNASFIVLIPKKSLSK 321

Query: 181 KVSNFRPISLVTR-------------------------------RQILDQVLIANVAIEE 217
           ++S+FRPISL+T                                RQILD VLIAN  ++E
Sbjct: 322 RISDFRPISLITSLYKIIAKVFSGRLRGVLHETIHYTQGAFVQGRQILDAVLIANEIVDE 381

[Close]

BLAST of Lag0037562 vs. ExPASy TrEMBL
Match: A0A438BYX6 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_276 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 2.1e-52
Identity = 112/244 (45.90%), Postives = 147/244 (60.25%), Query Frame = 0


Query: 4   KMEFAEVIRKENSSWRQKAKVNWAKDGDCNITFFHRVASGRRSRNIINSLISSEGNVLKE 63
           K E  E+I +E   WRQKAKV W K+GDCN  F+H+VA+GRR+R  I  L +  G VLK 
Sbjct: 351 KRELEELILREEIHWRQKAKVKWVKEGDCNSKFYHKVANGRRNRKYIKELENERGLVLKN 410

Query: 64  AKAVEDEILSYFSSLYGPPVVDRPFVEGIDWCPISESDLRVLEAHFTLEEIKQAVFDCDK 123
           A+++ +EIL YF  LY  P  +   VEG+DW PISE     LE+ FT EEI +A+F  D+
Sbjct: 411 AESITEEILHYFEKLYTNPTGESWGVEGLDWSPISEESALRLESPFTEEEISKAIFQLDR 470

Query: 124 NKSPGPDGFSMGFFQSKWEEIKSDLERVFKEFHERGIIDRSMNKTFVCLIPKKDRAGKVS 183
           +K+PGPDGF++  FQ  W+ IK DL RVF EFH  GII++S N +F+ LIPKK  + ++S
Sbjct: 471 DKAPGPDGFTIAVFQECWDVIKEDLVRVFAEFHRSGIINQSTNASFIVLIPKKSLSKRIS 530

Query: 184 NFRPISLVTR-------------------------------RQILDQVLIANVAIEEYRS 217
           +FRPISL+T                                RQILD VLIAN  ++E R 
Sbjct: 531 DFRPISLITSLYKIIAKVLSGRLRGVLHETIHYTQGAFVQGRQILDAVLIANEIVDERRR 590

[Close]

BLAST of Lag0037562 vs. ExPASy TrEMBL
Match: A0A438EUA1 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_264 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 4.6e-52
Identity = 112/246 (45.53%), Postives = 148/246 (60.16%), Query Frame = 0


Query: 2   SLKMEFAEVIRKENSSWRQKAKVNWAKDGDCNITFFHRVASGRRSRNIINSLISSEGNVL 61
           S K E  E+I +E   WRQKAKV W K+GDCN  F+H+VA+GRR+R  I  L +  G VL
Sbjct: 250 SRKGELEELILREEIHWRQKAKVKWVKEGDCNSKFYHKVANGRRNRKYIKELENERGLVL 309

Query: 62  KEAKAVEDEILSYFSSLYGPPVVDRPFVEGIDWCPISESDLRVLEAHFTLEEIKQAVFDC 121
           K A+++ +EIL YF  LY  P  +   VEG+DW PISE     L++ FT EEI +A+F  
Sbjct: 310 KNAESITEEILHYFEKLYTNPTGESWGVEGLDWSPISEESALRLDSPFTEEEISKAIFQL 369

Query: 122 DKNKSPGPDGFSMGFFQSKWEEIKSDLERVFKEFHERGIIDRSMNKTFVCLIPKKDRAGK 181
           D++K+PGPDGF++  FQ  W+ IK DL RVF EFH  GII++S N +F+ LIPKK  + +
Sbjct: 370 DRDKAPGPDGFTIAVFQECWDVIKEDLVRVFAEFHRSGIINQSTNASFIVLIPKKSLSKR 429

Query: 182 VSNFRPISLVTR-------------------------------RQILDQVLIANVAIEEY 217
           +S+FRPISL+T                                RQILD VLIAN  ++E 
Sbjct: 430 ISDFRPISLITSLYKIIAKVLSGRLRGVLHETIHYTQGAFVQGRQILDAVLIANEIVDER 489

[Close]

BLAST of Lag0037562 vs. ExPASy TrEMBL
Match: A5B034 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_007640 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 4.6e-52
Identity = 110/244 (45.08%), Postives = 145/244 (59.43%), Query Frame = 0


Query: 4    KMEFAEVIRKENSSWRQKAKVNWAKDGDCNITFFHRVASGRRSRNIINSLISSEGNVLKE 63
            K E  E+I +E   WRQKA+V W K+GDCN  FFH+VA+GRR+R  I SL +  G VL  
Sbjct: 1038 KGELEELILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKYIKSLENETGLVLNN 1097

Query: 64   AKAVEDEILSYFSSLYGPPVVDRPFVEGIDWCPISESDLRVLEAHFTLEEIKQAVFDCDK 123
            A ++ +EIL YF  LY  P+ +   +EG+DW PISE     L A FT EEI +A+F  D+
Sbjct: 1098 AVSITEEILLYFEKLYANPIGESWSIEGLDWSPISEESAISLVAPFTEEEISKAIFQMDR 1157

Query: 124  NKSPGPDGFSMGFFQSKWEEIKSDLERVFKEFHERGIIDRSMNKTFVCLIPKKDRAGKVS 183
            +K+PGPDGF++  FQ  W+ IK DL RVF EFH  G+I++S N +F+ L+PKK    K+S
Sbjct: 1158 DKAPGPDGFTIAVFQDCWDVIKEDLVRVFAEFHRSGVINQSTNASFIVLLPKKSTTKKIS 1217

Query: 184  NFRPISLVTR-------------------------------RQILDQVLIANVAIEEYRS 217
            NFRPISL+T                                RQI+D VLIAN  ++E R 
Sbjct: 1218 NFRPISLITSLYKIIAKVLSGRLRGVLHETIHSTQGAFVQGRQIMDAVLIANEIVDERRQ 1277

[Close]

BLAST of Lag0037562 vs. ExPASy TrEMBL
Match: A0A438DFY9 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_615 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 4.6e-52
Identity = 112/246 (45.53%), Postives = 148/246 (60.16%), Query Frame = 0


Query: 2   SLKMEFAEVIRKENSSWRQKAKVNWAKDGDCNITFFHRVASGRRSRNIINSLISSEGNVL 61
           S K E  E+I +E   WRQKAKV W K+GDCN  F+H+VA+GRR+R  I  L +  G VL
Sbjct: 328 SRKGELEELILREEIHWRQKAKVKWVKEGDCNSKFYHKVANGRRNRKYIKELENERGLVL 387

Query: 62  KEAKAVEDEILSYFSSLYGPPVVDRPFVEGIDWCPISESDLRVLEAHFTLEEIKQAVFDC 121
           K A+++ +EIL YF  LY  P  +   VEG+DW PISE     L++ FT EEI +A+F  
Sbjct: 388 KNAESITEEILHYFEKLYTNPTGESWGVEGLDWSPISEESALRLDSPFTEEEISKAIFQL 447

Query: 122 DKNKSPGPDGFSMGFFQSKWEEIKSDLERVFKEFHERGIIDRSMNKTFVCLIPKKDRAGK 181
           D++K+PGPDGF++  FQ  W+ IK DL RVF EFH  GII++S N +F+ LIPKK  + +
Sbjct: 448 DRDKAPGPDGFTIAVFQECWDVIKEDLVRVFAEFHRSGIINQSTNASFIVLIPKKSLSKR 507

Query: 182 VSNFRPISLVTR-------------------------------RQILDQVLIANVAIEEY 217
           +S+FRPISL+T                                RQILD VLIAN  ++E 
Sbjct: 508 ISDFRPISLITSLYKIIAKVLSGRLRGVLHETIHYTQGAFVQGRQILDAVLIANEIVDER 567

[Close]

BLAST of Lag0037562 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 6.4e-22
Identity = 59/184 (32.07%), Postives = 95/184 (51.63%), Query Frame = 0


Query: 16  SSWRQKAKVNWAKDGDCNITFFHRVASGRRSRNIINSLISSEGNVLKEAKAVEDEILSYF 75
           S +RQK+++ W +DGD N  FFH+V    +++N+I  L   +   ++    V++ I++Y+
Sbjct: 433 SFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYY 492

Query: 76  SSLYG-------PPVVDRPFVEGIDWCPISESDLRVLEAHFTLEEIKQAVFDCDKNKSPG 135
           + L G       P  V R  ++ I     +++    L A  + +EI  AVF   +NK+PG
Sbjct: 493 THLLGSDSDILTPDSVQR--IKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPG 552

Query: 136 PDGFSMGFFQSKWEEIKSDLERVFKEFHERGIIDRSMNKTFVCLIPKKDRAGKVSNFRPI 193
           PD F+  FF   W  +K       KEF   G + +  N T + LIPK     ++S FRP+
Sbjct: 553 PDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPV 612

The following BLAST results are available for this feature:

BLAST of Lag0037562 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW33934.1	3.3e-52	45.75	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
RVW16209.1	4.3e-52	45.90	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
RVW22252.1	9.5e-52	45.53	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
RVW51280.1	9.5e-52	45.53	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
RVW34407.1	9.5e-52	45.53	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]

BLAST of Lag0037562 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P14381	5.5e-18	30.20	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV...	[more]
P11369	6.3e-14	26.63	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE...	[more]
O00370	5.3e-13	27.81	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1	[more]
P08548	1.3e-11	27.11	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1	[more]

BLAST of Lag0037562 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438DEL6	1.6e-52	45.75	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A0A438BYX6	2.1e-52	45.90	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A0A438EUA1	4.6e-52	45.53	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A5B034	4.6e-52	45.08	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]
A0A438DFY9	4.6e-52	45.53	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]

BLAST of Lag0037562 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43760.1	6.4e-22	32.07	DNAse I-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 17..193
None	No IPR available	PANTHER	PTHR33116:SF38	OS01G0158850 PROTEIN	coord: 17..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0037562.1	Lag0037562.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process