Lag0037561 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0037561
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr2: 7280318 .. 7281958 (+)
RNA-Seq Expression	Lag0037561
Synteny	Lag0037561

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACAGACCGTCCAACCAACGAACTCTCATTCTCAGACCATTGTCGAGGTAAGTTCGAAAAGGGAGGCTAGCCAAGTACGTCCTTTTCCCTAGTTTTTATTATCCTTCGTTGGGTTTTGGTCAAGGGAATTTTTCTCATCCCTGGGCGGTTGTCTCTCATTACCCGTGGGTGTGTTTTCCTCCGAGTGGCAGTGTTAGGGGCTCGTTCCTACACCTCCGGATTCTTTCAATCCTTGAGCAGTTGGGGAGTCTAACAATATTTACAATTGGGGGTTGTTGCCTAGTCCTTAACCGGTCACCTCTCCAGCGGCTTGTGGGGGTACCCTGTCTCAGCCTGTCAGTGTATCGTGGGGGGCAGAGGGTTTGCCTAATTCCATGATTGTCAATGCCGTAGGATGTAGTCTAGAGGGGGGACACTCACCACTTCCTGATGGGGTTTCTGAGGGCGGTATTTTATCTTTTCCTAGTTCGACTTGTCCTCCAAGTGTAAACCCAATCGGGGAGATTCAATATTTGTCCAGAGGGCTGGGCTGCTATGGATTCTGTTGGTATCCACGCAACTCCTATCTTAGAAACCCAATCTTCTAAAGGGGGGAAGAGAAAATGAGGTAAGCAGAGTGGAGGGGGAGAGAAGAATAAGCTGGATAGGGTGGATAGGGAGTTAAAGAAGTTGGACTGCTCGGTTAATTATGACAAGAAGAAAGGCCCTTTGGAGGCCAGGGAAACCCTCGTTTTAAAATGAAGATTATCTCCTGGAATGTTAGAGGGTTGGGTGGTAGGGTGAAGCATAGTTTGGTGAAAGATTTAATTTCTGAGGAAATCCAGAGGTGGCTATTTTAGTGGAGACAAAAGGATGAGCTATTGTCGCCCTGATTAAGAGTCTCTGGGGGGCTAGGAGAGTGGAGTGGGCTGGCCTCGAATCTGACGGAGCTTCTGGGGGCATTCTTATCATGTGGGATAGCCTTAGGGTTTCGGTGATTGAAGTAGTTCTGGGCCAGTTCTCCGTTTCCATTCTGTTTCATTCTGAGAATGGGGATCCTAGATGGATTTCTGGCGTCTATGGCCCTCCTAGGCCGAGGGGTAGGGAGCCTTCTGGGAGGAGTTGGGCGATCTTTCTAGTTTATGTAATCCTTGTTGGTGTGTGGTTGGTGATTTTAATGTTATCCGCTCTCCTTGGAGAAAGCTTCCGGGGGTCACAAGACGAAGTCTATGCGAAGATTCAATGATTTCATCGAAGACAGTCATCTTGTGGATCCTCCCTTGGTTAACGGGCGATTCACTTGGGCCAATAGTAGGGCTAGAAGTAGAATCGATAGATTCTTGTTCTCTAAAGGTTGGATGGAAGTTTATGGGTTTGTGAGACAAGAACTAGGTCCTCGGTCACTTCAGATCATTGGCCCCTCTTTTGTAAGATTGAAGCTGTCAGTTGGGGTCCATGTCCCTTTAGATTCGAGAACATGTGGTTGGATCACCCCTCCTTTAAATCTTCCTTCCCTTCTTGGTGGAGTTTGGAAGTTCATGGCAATTGGGAATGATTCCGCTTTAGTGACGCTCAAAGTGTGGAATCGGGAGGTGTGCGGAGATGCAATAATAAGAAGCAGGAGATTCTGGGTAGGATTAAAATCATTGACGAGCTAG

mRNA sequence

ATGCAACAGACCGTCCAACCAACGAACTCTCATTCTCAGACCATTGTCGAGCCTGTCAGTGTATCGTGGGGGGCAGAGGGTTTGCCTAATTCCATGATTGTCAATGCCGTAGGATGTAGTCTAGAGGGGGGACACTCACCACTTCCTGATGGGGTTTCTGAGGGCGGTATTTTATCTTTTCCTAGTTCGACTTGTCCTCCAAGTGTAAACCCAATCGGGGAGATTCAATATTTGTCCAGAGGGCTGGGCTGCTATGGATTCTGTTGGAGAGTGGAGTGGGCTGGCCTCGAATCTGACGGAGCTTCTGGGGGCATTCTTATCATGTGGGATAGCCTTAGGGTTTCGGTGATTGAAGTAGTTCTGGGCCAGTTCTCCGTTTCCATTCTGTTTCATTCTGAGAATGGGGATCCTAGATGGATTTCTGGCGTCTATGGCCCTCCTAGGCCGAGGGGTAGGGAGCCTTCTGGGAGGAGTTGGGCGATCTTTCTAGTTTATGTAATCCTTGTTGCTTCCGGGGGTCACAAGACGAAGTCTATGCGAAGATTCAATGATTTCATCGAAGACAGTCATCTTGTGGATCCTCCCTTGGTTAACGGGCGATTCACTTGGGCCAATAGTAGGGCTAGAAGTAGAATCGATAGATTCTTGTTCTCTAAAGGTTGGATGGAAGTTTATGGGTTTGTGAGACAAGAACTAGGTCCTCGGTCACTTCAGATCATTGGCCCCTCTTTTGTAAGATTGAAGCTGTCAGTTGGGGTCCATGTCCCTTTAGATTCGAGAACATGTGGTTGGATCACCCCTCCTTTAAATCTTCCTTCCCTTCTTGGTGGAGTTTGGAAGTTCATGGCAATTGGGAATGATTCCGCTTTAGTGACGCTCAAAGTGTGGAATCGGGAGGTGTGCGGAGATGCAATAATAAGAAGCAGGAGATTCTGGGTAGGATTAAAATCATTGACGAGCTAG

Coding sequence (CDS)

ATGCAACAGACCGTCCAACCAACGAACTCTCATTCTCAGACCATTGTCGAGCCTGTCAGTGTATCGTGGGGGGCAGAGGGTTTGCCTAATTCCATGATTGTCAATGCCGTAGGATGTAGTCTAGAGGGGGGACACTCACCACTTCCTGATGGGGTTTCTGAGGGCGGTATTTTATCTTTTCCTAGTTCGACTTGTCCTCCAAGTGTAAACCCAATCGGGGAGATTCAATATTTGTCCAGAGGGCTGGGCTGCTATGGATTCTGTTGGAGAGTGGAGTGGGCTGGCCTCGAATCTGACGGAGCTTCTGGGGGCATTCTTATCATGTGGGATAGCCTTAGGGTTTCGGTGATTGAAGTAGTTCTGGGCCAGTTCTCCGTTTCCATTCTGTTTCATTCTGAGAATGGGGATCCTAGATGGATTTCTGGCGTCTATGGCCCTCCTAGGCCGAGGGGTAGGGAGCCTTCTGGGAGGAGTTGGGCGATCTTTCTAGTTTATGTAATCCTTGTTGCTTCCGGGGGTCACAAGACGAAGTCTATGCGAAGATTCAATGATTTCATCGAAGACAGTCATCTTGTGGATCCTCCCTTGGTTAACGGGCGATTCACTTGGGCCAATAGTAGGGCTAGAAGTAGAATCGATAGATTCTTGTTCTCTAAAGGTTGGATGGAAGTTTATGGGTTTGTGAGACAAGAACTAGGTCCTCGGTCACTTCAGATCATTGGCCCCTCTTTTGTAAGATTGAAGCTGTCAGTTGGGGTCCATGTCCCTTTAGATTCGAGAACATGTGGTTGGATCACCCCTCCTTTAAATCTTCCTTCCCTTCTTGGTGGAGTTTGGAAGTTCATGGCAATTGGGAATGATTCCGCTTTAGTGACGCTCAAAGTGTGGAATCGGGAGGTGTGCGGAGATGCAATAATAAGAAGCAGGAGATTCTGGGTAGGATTAAAATCATTGACGAGCTAG

Protein sequence

MQQTVQPTNSHSQTIVEPVSVSWGAEGLPNSMIVNAVGCSLEGGHSPLPDGVSEGGILSFPSSTCPPSVNPIGEIQYLSRGLGCYGFCWRVEWAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREPSGRSWAIFLVYVILVASGGHKTKSMRRFNDFIEDSHLVDPPLVNGRFTWANSRARSRIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVGVHVPLDSRTCGWITPPLNLPSLLGGVWKFMAIGNDSALVTLKVWNREVCGDAIIRSRRFWVGLKSLTS

Homology

[Close]

BLAST of Lag0037561 vs. NCBI nr
Match: VVA41200.1 (PREDICTED: RNA-directed DNA polymerase, partial [Prunus dulcis])

HSP 1 Score: 129.0 bits (323), Expect = 7.2e-26
Identity = 78/233 (33.48%), Postives = 111/233 (47.64%), Query Frame = 0


Query: 92  EWAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRG 151
           EW    S G SGGI +MW+S   S+ +  +G+FSVSI     +G   W+SG+YGP  PR 
Sbjct: 22  EWVYAPSRGRSGGIAVMWNSQTTSISDFEIGEFSVSIRILDASGGDWWLSGIYGPCHPRD 81

Query: 152 REP-----------SGRSWAI-----FLVYVILVASGGHKTKSMRRFNDFIEDSHLVDPP 211
           R              G  W I      + +V   ++GG  T SM+ FNDFI+D++L DP 
Sbjct: 82  RRRFWEELAGLFGLCGNKWCIGGDFNVVRFVSEKSNGGRMTSSMKTFNDFIDDTNLRDPN 141

Query: 212 LVNGRFTWANSRARS---RIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVG 271
           L+N  FTW+N R  +   R+DRFLFS+ W + +  V+     R      P          
Sbjct: 142 LLNASFTWSNFRENAVCRRLDRFLFSEEWEDSFPHVKHTALARVTSDHCP---------- 201

Query: 272 VHVPLDSRTCGWITPPLNLPSLLGGVWKFMAIGNDSALVTLKVWNREVCGDAI 306
             + LD+    W   P          ++F  I   +    +KVWN+EV GD +
Sbjct: 202 --IMLDTSILKWGPGP----------FRFENIRLRTIKQKIKVWNKEVFGDLV 232

[Close]

BLAST of Lag0037561 vs. NCBI nr
Match: XP_028075126.1 (uncharacterized protein LOC114277426 [Camellia sinensis])

HSP 1 Score: 124.8 bits (312), Expect = 1.4e-24
Identity = 69/162 (42.59%), Postives = 94/162 (58.02%), Query Frame = 0


Query: 93  WAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGR 152
           WA L S G SGGILIMWD   VS  EVV+G FS+SI F + +    W++GVYGP RP  R
Sbjct: 58  WAVLPSTGRSGGILIMWDDRVVSECEVVVGVFSLSIKFRNRDNKEWWLTGVYGPNRPWSR 117

Query: 153 EP-----------SGRSWAIFLVY-VILVAS----GGHKTKSMRRFNDFIEDSHLVDPPL 212
           +               +W +   + V+ +AS    G    +SMR F+ FI +  L+DPPL
Sbjct: 118 QDWWDELGGLFGLCTPNWCVGWDFNVVRLASEKLNGVSTNRSMRDFDSFIRECELIDPPL 177

Query: 213 VNGRFTWAN---SRARSRIDRFLFSKGWMEVYGFVRQELGPR 236
            N RFTW+N   +R   R+DRFL + GW E++  +R+E+ PR
Sbjct: 178 SNARFTWSNLQENRVCRRLDRFLHTLGWEELFLNIRKEVRPR 219

[Close]

BLAST of Lag0037561 vs. NCBI nr
Match: VVA21938.1 (Hypothetical predicted protein, partial [Prunus dulcis])

HSP 1 Score: 122.5 bits (306), Expect = 6.7e-24
Identity = 75/225 (33.33%), Postives = 108/225 (48.00%), Query Frame = 0


Query: 100 GASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP----- 159
           G SGGI +MW+S   S+ +  +G+FSVSI     +G   W+SG+YGP  PR R       
Sbjct: 30  GRSGGIAVMWNSQTTSISDFEIGEFSVSIRILDASGGDWWLSGIYGPCHPRDRRRFWEEL 89

Query: 160 ------SGRSWAI-----FLVYVILVASGGHKTKSMRRFNDFIEDSHLVDPPLVNGRFTW 219
                  G  W I      + +V   ++GG  T SM+ FNDFI+D++L DP L+N  FTW
Sbjct: 90  AGLFGLCGNKWCIGGDFNVVRFVSEKSNGGRMTSSMKIFNDFIDDTNLRDPNLLNASFTW 149

Query: 220 ANSRARS---RIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVGVHVPLDSR 279
           +N R  +   R+DRFLFS+ W + +  V+     R      P            + LD+ 
Sbjct: 150 SNFRENAVCRRLDRFLFSEEWEDSFPHVKHTALARVTSDHCP------------IMLDTS 209

Query: 280 TCGWITPPLNLPSLLGGVWKFMAIGNDSALVTLKVWNREVCGDAI 306
              W   P          ++F  I   +    +KVWN+EV GD +
Sbjct: 210 ILKWGPGP----------FRFENIRLRTIKQKIKVWNKEVFGDLV 232

[Close]

BLAST of Lag0037561 vs. NCBI nr
Match: XP_028093340.1 (uncharacterized protein LOC114293463 [Camellia sinensis])

HSP 1 Score: 119.8 bits (299), Expect = 4.4e-23
Identity = 68/162 (41.98%), Postives = 93/162 (57.41%), Query Frame = 0


Query: 93  WAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGR 152
           WA L S G SGGILIMWD   VS  EVV G FS+SI F + +    W++GVYGP +P  R
Sbjct: 42  WAVLPSTGRSGGILIMWDDRVVSKCEVVAGVFSLSINFRNRDNKVWWLTGVYGPIKPGSR 101

Query: 153 EP-----------SGRSWAIFLVY-VILVAS----GGHKTKSMRRFNDFIEDSHLVDPPL 212
           +               +W +   + V+ +AS    G   ++SMR F+ FI D  L+D PL
Sbjct: 102 QEWWDELAGLFGLCSPNWCVGGDFNVVRLASEKLNGVSTSRSMRDFDSFIRDCELIDLPL 161

Query: 213 VNGRFTWAN---SRARSRIDRFLFSKGWMEVYGFVRQELGPR 236
            N RFTW+N   +R   ++DRFL + G  E++  +RQE+GPR
Sbjct: 162 SNARFTWSNLQENRVCCKLDRFLHTLGCKELFPDIRQEVGPR 203

[Close]

BLAST of Lag0037561 vs. NCBI nr
Match: RVW74143.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 119.8 bits (299), Expect = 4.4e-23
Identity = 83/257 (32.30%), Postives = 120/257 (46.69%), Query Frame = 0


Query: 92  EWAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRG 151
           EWA L + GASGGIL+MWDS ++   EVVLG FSVS+ F  +  +  W+S VYGP     
Sbjct: 25  EWAVLPACGASGGILVMWDSKKLHSEEVVLGSFSVSVKFAVDGSEQFWLSAVYGPNSTAL 84

Query: 152 REP-----------SGRSWAIFLVYVIL-----VASGGHKTKSMRRFNDFIEDSHLVDPP 211
           R+            S   W +   + ++        GG  T SM+  +DFI ++ L+DPP
Sbjct: 85  RKDFWEELSDIFGLSSPCWCVGGDFNVIRRCSEKLGGGRLTPSMKDLDDFIRENELIDPP 144

Query: 212 LVNGRFTWANSRAR---SRIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVG 271
           L +  FTW+N +      R+DRFL+S  W        ++L P+SLQ + P +     S  
Sbjct: 145 LRSASFTWSNMQEHPVCKRLDRFLYSNEW--------EQLFPQSLQDVLPRWTSDHWS-- 204

Query: 272 VHVPLDSRTCGWITPP-------LNLPS---LLGGVWK-FMAIGNDS---------ALVT 310
             + L++    W   P       L+ PS   + G  W+ F   G +              
Sbjct: 205 --IVLETNPFKWGPTPFRFENMWLHHPSFKEIFGSWWREFQGDGWEGHKFMRKLQFLKAK 264

[Close]

BLAST of Lag0037561 vs. ExPASy TrEMBL
Match: A0A5E4GN72 (PREDICTED: RNA-directed DNA polymerase (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B014918 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.5e-26
Identity = 78/233 (33.48%), Postives = 111/233 (47.64%), Query Frame = 0


Query: 92  EWAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRG 151
           EW    S G SGGI +MW+S   S+ +  +G+FSVSI     +G   W+SG+YGP  PR 
Sbjct: 22  EWVYAPSRGRSGGIAVMWNSQTTSISDFEIGEFSVSIRILDASGGDWWLSGIYGPCHPRD 81

Query: 152 REP-----------SGRSWAI-----FLVYVILVASGGHKTKSMRRFNDFIEDSHLVDPP 211
           R              G  W I      + +V   ++GG  T SM+ FNDFI+D++L DP 
Sbjct: 82  RRRFWEELAGLFGLCGNKWCIGGDFNVVRFVSEKSNGGRMTSSMKTFNDFIDDTNLRDPN 141

Query: 212 LVNGRFTWANSRARS---RIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVG 271
           L+N  FTW+N R  +   R+DRFLFS+ W + +  V+     R      P          
Sbjct: 142 LLNASFTWSNFRENAVCRRLDRFLFSEEWEDSFPHVKHTALARVTSDHCP---------- 201

Query: 272 VHVPLDSRTCGWITPPLNLPSLLGGVWKFMAIGNDSALVTLKVWNREVCGDAI 306
             + LD+    W   P          ++F  I   +    +KVWN+EV GD +
Sbjct: 202 --IMLDTSILKWGPGP----------FRFENIRLRTIKQKIKVWNKEVFGDLV 232

[Close]

BLAST of Lag0037561 vs. ExPASy TrEMBL
Match: M5XUF8 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015473mg PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-24
Identity = 75/233 (32.19%), Postives = 109/233 (46.78%), Query Frame = 0


Query: 92  EWAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRG 151
           EW    S G SGGI++MW+S  +S+ +  +G+FSVSI     +G   W+SG+YG   PR 
Sbjct: 340 EWVYAPSRGRSGGIVVMWNSQTISISDFEIGEFSVSIRILDASGGDWWLSGIYGLCHPRD 399

Query: 152 REP-----------SGRSWAI-----FLVYVILVASGGHKTKSMRRFNDFIEDSHLVDPP 211
           R              G  W I      + +V   ++GG  T SM+ FNDFI+D++L DP 
Sbjct: 400 RRRFWEELAGLFGLCGNKWCIGGDFNVVRFVSEKSNGGRMTSSMKNFNDFIDDTNLRDPN 459

Query: 212 LVNGRFTWANSRARS---RIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVG 271
           L+N  FTW+N R  +   R+DRFLF + W + +  V+                 L     
Sbjct: 460 LLNASFTWSNFRENAVCRRLDRFLFFEAWEDSFPHVKH--------------TALARVTS 519

Query: 272 VHVPLDSRTCGWITPPLNLPSLLGGVWKFMAIGNDSALVTLKVWNREVCGDAI 306
            H P+   T      P        G ++F  I   +    +K WN+EV GD +
Sbjct: 520 DHCPIQLDTSNLKWGP--------GPFRFENIRLRTIKQKIKDWNKEVFGDLV 550

[Close]

BLAST of Lag0037561 vs. ExPASy TrEMBL
Match: A0A5E4F859 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035883 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.2e-24
Identity = 75/225 (33.33%), Postives = 108/225 (48.00%), Query Frame = 0


Query: 100 GASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRGREP----- 159
           G SGGI +MW+S   S+ +  +G+FSVSI     +G   W+SG+YGP  PR R       
Sbjct: 30  GRSGGIAVMWNSQTTSISDFEIGEFSVSIRILDASGGDWWLSGIYGPCHPRDRRRFWEEL 89

Query: 160 ------SGRSWAI-----FLVYVILVASGGHKTKSMRRFNDFIEDSHLVDPPLVNGRFTW 219
                  G  W I      + +V   ++GG  T SM+ FNDFI+D++L DP L+N  FTW
Sbjct: 90  AGLFGLCGNKWCIGGDFNVVRFVSEKSNGGRMTSSMKIFNDFIDDTNLRDPNLLNASFTW 149

Query: 220 ANSRARS---RIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVGVHVPLDSR 279
           +N R  +   R+DRFLFS+ W + +  V+     R      P            + LD+ 
Sbjct: 150 SNFRENAVCRRLDRFLFSEEWEDSFPHVKHTALARVTSDHCP------------IMLDTS 209

Query: 280 TCGWITPPLNLPSLLGGVWKFMAIGNDSALVTLKVWNREVCGDAI 306
              W   P          ++F  I   +    +KVWN+EV GD +
Sbjct: 210 ILKWGPGP----------FRFENIRLRTIKQKIKVWNKEVFGDLV 232

[Close]

BLAST of Lag0037561 vs. ExPASy TrEMBL
Match: A0A803QQM3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.6e-23
Identity = 65/169 (38.46%), Postives = 93/169 (55.03%), Query Frame = 0


Query: 86   GFCWRVE---WAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISG 145
            G  WR     W  L + G SGG L++WD+  +SV++ ++G+FS+S+L ++E  +P W SG
Sbjct: 971  GSIWRSRFKAWILLPALGRSGGTLLIWDTRTISVLDSLVGEFSISVLINAEGKEPWWFSG 1030

Query: 146  VYGPPRPRGREP-----------SGRSWAIFLVYVILVASG-----GHKTKSMRRFNDFI 205
            VYGP   + R              G SW +   + +    G        T+SM+ F+  I
Sbjct: 1031 VYGPCSYKLRPEFWDELAGLSSICGESWCVGGDFNVTRRVGEKLNSSSCTRSMKLFDGLI 1090

Query: 206  EDSHLVDPPLVNGRFTWANSRAR---SRIDRFLFSKGWMEVYGFVRQEL 233
             +  L+DP L NG FTW+N RA    SR+DRFLFS  W  +Y FVRQE+
Sbjct: 1091 RELQLIDPKLENGSFTWSNFRASPVCSRLDRFLFSNNWNVIYPFVRQEM 1139

[Close]

BLAST of Lag0037561 vs. ExPASy TrEMBL
Match: A0A438GPL3 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_555 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-23
Identity = 83/257 (32.30%), Postives = 120/257 (46.69%), Query Frame = 0


Query: 92  EWAGLESDGASGGILIMWDSLRVSVIEVVLGQFSVSILFHSENGDPRWISGVYGPPRPRG 151
           EWA L + GASGGIL+MWDS ++   EVVLG FSVS+ F  +  +  W+S VYGP     
Sbjct: 25  EWAVLPACGASGGILVMWDSKKLHSEEVVLGSFSVSVKFAVDGSEQFWLSAVYGPNSTAL 84

Query: 152 REP-----------SGRSWAIFLVYVIL-----VASGGHKTKSMRRFNDFIEDSHLVDPP 211
           R+            S   W +   + ++        GG  T SM+  +DFI ++ L+DPP
Sbjct: 85  RKDFWEELSDIFGLSSPCWCVGGDFNVIRRCSEKLGGGRLTPSMKDLDDFIRENELIDPP 144

Query: 212 LVNGRFTWANSRAR---SRIDRFLFSKGWMEVYGFVRQELGPRSLQIIGPSFVRLKLSVG 271
           L +  FTW+N +      R+DRFL+S  W        ++L P+SLQ + P +     S  
Sbjct: 145 LRSASFTWSNMQEHPVCKRLDRFLYSNEW--------EQLFPQSLQDVLPRWTSDHWS-- 204

Query: 272 VHVPLDSRTCGWITPP-------LNLPS---LLGGVWK-FMAIGNDS---------ALVT 310
             + L++    W   P       L+ PS   + G  W+ F   G +              
Sbjct: 205 --IVLETNPFKWGPTPFRFENMWLHHPSFKEIFGSWWREFQGDGWEGHKFMRKLQFLKAK 264

The following BLAST results are available for this feature:

BLAST of Lag0037561 vs. NCBI nr


Match Name	E-value	Identity	Description
VVA41200.1	7.2e-26	33.48	PREDICTED: RNA-directed DNA polymerase, partial [Prunus dulcis]	[more]
XP_028075126.1	1.4e-24	42.59	uncharacterized protein LOC114277426 [Camellia sinensis]	[more]
VVA21938.1	6.7e-24	33.33	Hypothetical predicted protein, partial [Prunus dulcis]	[more]
XP_028093340.1	4.4e-23	41.98	uncharacterized protein LOC114293463 [Camellia sinensis]	[more]
RVW74143.1	4.4e-23	32.30	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]

BLAST of Lag0037561 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0037561 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5E4GN72	3.5e-26	33.48	PREDICTED: RNA-directed DNA polymerase (Fragment) OS=Prunus dulcis OX=3755 GN=AL...	[more]
M5XUF8	1.5e-24	32.19	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=...	[more]
A0A5E4F859	3.2e-24	33.33	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3...	[more]
A0A803QQM3	1.6e-23	38.46	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A438GPL3	2.1e-23	32.30	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]

BLAST of Lag0037561 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 76..231 e-value: 2.3E-5 score: 26.3
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 95..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0037561.1	Lag0037561.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity