Lag0037484 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0037484
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionAminoacyl-tRNA hydrolase
Locationchr2: 6681089 .. 6683549 (-)
RNA-Seq ExpressionLag0037484
SyntenyLag0037484
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGGTTCTTCTAATTCTTCCAGAAAGGTATTCGATTTCCTGGGTTGCTTTCTCTCTCCCTCTGTGCCTCTTCTCGATGATGTTAATGCTTCATGGAAAATTGTTAACGTCGTGGATGTTGTTTGAATTAATTTGTCGTTTTCTTTTCTGTGTTGTTAGAAGAAACAAGTGAAGCCAGAAAAAGAATGGCTCTCGGTGAGTTTCAGACCCGAGAACTTCATACCAGGCCTCGTCATTGGTTTCATTCTTGGGTTGTTTTTGGATTTGTCAAAACCCAGTAAAGGCAATGCTAAGAAGGGTTATTTCCTGCCGTCCAAGTACCAACAGCTATCTCCAGCCTCAAACGACGGCGATCAAGAGCTCAAATTGGTTAGCGTTCGTCTTTACCGTGCTGGTTTATTTTATTTTTGCAGTTTGGTTTATTGTGACCTTTATCTGGAATTCTGTGGAGTTGGAAATGGTTTCTGTTCGTGATTGTGATGGATTATGATCACCAAAATAGAATGAAAGGGAAGAATGAAACAAGAATCTTTTAGTTCAGCCTCAACTATGTTCGATAACAGGGCAAAGAATAGTACATAGGGCTTTTAAAAATTAGCTTTCATATTGGGATGAGGTTTTCTGTTTAATGGCAATGAAAATGGTTCTCAATTGCTCAAATTTTGAGGCTTGAATTGCTTGTAAGACAGAAGAGTTTAGGACCATGCTTGAGGTAGTTGTGTGATAATATTGCGAACAAAATTAGCTTTTGAGTGAACATGCCTATTTGCCACAACATTAAGTGATGAAGCAGAGTTTAGGTACGTTGCTTACACCATCTTTGCTGTTGCCCATCAAGTATCTGCAGTCCGTCCTGCCAGGATGTGAAAAGGGAACCGATTAGTCGAGGATCAAAAGGGCCTGCTGGAATATGATACATCAGTTTAGACAAGTAAACTTTGCTTTGCAACACTTAGTTATATGTATATTTCCAAAAATGTTATGTTGTATTATGGCTCGTTAGATTTTCCCCCCTTAAGCGTTGAAGCACACTAGCAGTTACTGCCACACCGAGTCCTTGCATCGTGTAACTCGTATAATGTGTTTAGCTGCCGAGAAACATCTGACATTCTGACTTTTAATTGAAGGTCCTGGTTGTTAGGCAAGATCTGAAGATGGGTTCTGGAAAAATTGCATCCCAATGTGCTCGTAAGACTTAAGATGCTGAATTTCATATATGTTATAGTGTGCATTTAATTCTAGTTTGATTGCTTTGGTCCATGTATCACTTCTCATGTCTTCCCGCCATCAATGCTAAATGTTTTTGCATGTTTTCTGTCAAATTATGAAGATGCTGCTACTGGCTTGTATGCAGAACTAATGCAAAGGTACTCCTTATACTATACTACTTCCGAATATCTGATTTGATCAAAGTATGTACTCAGCTAATTCTTCATCCGTCTCTCTTTTCTGCATCTATATCCATTATTTCTAATATCTAGTGCAGCCACCGAAACCTTTTGAGGCAGTGGGAGCTATTTGGGCAGCCAAAAATAGTTGTAACATGCAAGAATCAACAAGAAATGTAAGCAGGTGATTCCTTTTTCTGAAAATGTAATCATCTAAGTGATAAACATGTGAAACCTTATGGTTTTTGAAAGACTTGTTGGCTTTTGTTGAGGATTGGGAGGAGAGGAAGAGAACAGTTGGGAAGGATTGTTTATTGAAGATACACTTTTGTTGTTAAATTTATTTCTTTTCTCAAATCAGGAATAAACTGAAGGATGCAGCTGAGACCATTGGCCTTCCTACTTTTGTTGTTGCTGATGCTGGACGCACACAGGTACAATCTTTGTCCTGTACTTACAAGCATTTTGATTAATGCATGAGAAATGATCGGATAACTAGGGACGATAAATGCTTAACATGTTGAATTACTAATGTTTATGTTTTGGACACGTGGCCAAATGATTTTTCACCTGTTATGCGGGTCGGTATTATATTGTCCTATGAATGTGATGCATCAGCAAAATATATTCAGCTCTCTGGAACCTGGTATCCTGAAATTGGTTCAATGATATGCAGGTTTCGGCTGGATCAAAGACTGTTCTTGCCATTGGACCCGGTAATTCTTCTTTACCCTGTGATAGAATTTTGTGGTTGCCTGGTTTATTTTCCTTATGTCACTCGTCATTCTTGTGTATATATACAATACATAGTCTTCCCTTGCACTCATGAGTTTGGAAATTAGCACTTGATCCAATGAATGATTCTCGATATAAATTGGAGAGGAAATGACATTACTAGCATTTAAACACAACCTCTTGCTCTCACTGAATCTGAAAACTTAAGCGGATGAGTTATGGTAAATTTAATTATTTATTCATATTTTTAACAATATGCACGTTCCTCGACTCTTTTTTAAATAGGGCCAAAGGAGTCTGTTGATGCGGTAACGGGTAAACTTCGCCTACTCTAG

mRNA sequence

ATGTTGGGTTCTTCTAATTCTTCCAGAAAGAAGAAACAAGTGAAGCCAGAAAAAGAATGGCTCTCGGTGAGTTTCAGACCCGAGAACTTCATACCAGGCCTCGTCATTGGTTTCATTCTTGGGTTGTTTTTGGATTTGTCAAAACCCAGTAAAGGCAATGCTAAGAAGGGTTATTTCCTGCCGTCCAAGTACCAACAGCTATCTCCAGCCTCAAACGACGGCGATCAAGAGCTCAAATTGGTCCTGGTTGTTAGGCAAGATCTGAAGATGGGTTCTGGAAAAATTGCATCCCAATGTGCTCATGCTGCTACTGGCTTGTATGCAGAACTAATGCAAAGGAATAAACTGAAGGATGCAGCTGAGACCATTGGCCTTCCTACTTTTGTTGTTGCTGATGCTGGACGCACACAGGTTTCGGCTGGATCAAAGACTGTTCTTGCCATTGGACCCGGGCCAAAGGAGTCTGTTGATGCGGTAACGGGTAAACTTCGCCTACTCTAG

Coding sequence (CDS)

ATGTTGGGTTCTTCTAATTCTTCCAGAAAGAAGAAACAAGTGAAGCCAGAAAAAGAATGGCTCTCGGTGAGTTTCAGACCCGAGAACTTCATACCAGGCCTCGTCATTGGTTTCATTCTTGGGTTGTTTTTGGATTTGTCAAAACCCAGTAAAGGCAATGCTAAGAAGGGTTATTTCCTGCCGTCCAAGTACCAACAGCTATCTCCAGCCTCAAACGACGGCGATCAAGAGCTCAAATTGGTCCTGGTTGTTAGGCAAGATCTGAAGATGGGTTCTGGAAAAATTGCATCCCAATGTGCTCATGCTGCTACTGGCTTGTATGCAGAACTAATGCAAAGGAATAAACTGAAGGATGCAGCTGAGACCATTGGCCTTCCTACTTTTGTTGTTGCTGATGCTGGACGCACACAGGTTTCGGCTGGATCAAAGACTGTTCTTGCCATTGGACCCGGGCCAAAGGAGTCTGTTGATGCGGTAACGGGTAAACTTCGCCTACTCTAG

Protein sequence

MLGSSNSSRKKKQVKPEKEWLSVSFRPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFLPSKYQQLSPASNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQRNKLKDAAETIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKESVDAVTGKLRLL
Homology
[Close]
BLAST of Lag0037484 vs. NCBI nr
Match: XP_008466065.1 (PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 295.8 bits (756), Expect = 2.3e-76
Identity = 157/192 (81.77%), Postives = 163/192 (84.90%), Query Frame = 0 

Query: 1   MLGSSNSSRKKKQVKPEKEWLSVSFRPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60
           MLG+S SSRKK+QVKPEKEWLSVSF+PENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL
Sbjct: 1   MLGASKSSRKKQQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPASNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQ-------- 120
           PSKYQQLSPASN+GDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQ        
Sbjct: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120

Query: 121 ------------------RNKLKDAAETIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 167
                              NKLKDAAE IGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE
Sbjct: 121 WELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 180

[Close]
BLAST of Lag0037484 vs. NCBI nr
Match: XP_022157533.1 (peptidyl-tRNA hydrolase 2, mitochondrial isoform X2 [Momordica charantia])

HSP 1 Score: 293.5 bits (750), Expect = 1.1e-75
Identity = 157/192 (81.77%), Postives = 161/192 (83.85%), Query Frame = 0 

Query: 1   MLGSSNSSRKKKQVKPEKEWLSVSFRPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60
           ML SSNSSRKK+QVKPEKEWLSVSFRPENFIPGLVIGFI GLFLDLSKPSKGNAK+GYFL
Sbjct: 1   MLKSSNSSRKKQQVKPEKEWLSVSFRPENFIPGLVIGFIFGLFLDLSKPSKGNAKRGYFL 60

Query: 61  PSKYQQLSPASNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQ-------- 120
           PSKYQQL+PASNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQ        
Sbjct: 61  PSKYQQLTPASNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120

Query: 121 ------------------RNKLKDAAETIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 167
                              NKLKDAA+ IGLPTFVVADAGRTQVSAGSKTVLAIGPGPK 
Sbjct: 121 WELCGQPKIVVTCKNQHEMNKLKDAADNIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKA 180

[Close]
BLAST of Lag0037484 vs. NCBI nr
Match: XP_004136220.1 (peptidyl-tRNA hydrolase 2, mitochondrial isoform X1 [Cucumis sativus] >KGN60321.1 hypothetical protein Csa_002634 [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 1.5e-75
Identity = 155/192 (80.73%), Postives = 163/192 (84.90%), Query Frame = 0 

Query: 1   MLGSSNSSRKKKQVKPEKEWLSVSFRPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60
           MLG+S SSRKK+QVKPEKEWLSVSF+PENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL
Sbjct: 1   MLGASKSSRKKQQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPASNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQ-------- 120
           PSKYQQLSPASN+GDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQ        
Sbjct: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120

Query: 121 ------------------RNKLKDAAETIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 167
                              NKLKD+AE IGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE
Sbjct: 121 WELCGQPKIVVTCKNQHEMNKLKDSAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 180

[Close]
BLAST of Lag0037484 vs. NCBI nr
Match: XP_022941498.1 (peptidyl-tRNA hydrolase 2, mitochondrial [Cucurbita moschata] >XP_022981057.1 peptidyl-tRNA hydrolase 2, mitochondrial [Cucurbita maxima] >XP_023523204.1 peptidyl-tRNA hydrolase 2, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo] >KAG6608093.1 Peptidyl-tRNA hydrolase 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 291.2 bits (744), Expect = 5.7e-75
Identity = 154/192 (80.21%), Postives = 160/192 (83.33%), Query Frame = 0 

Query: 1   MLGSSNSSRKKKQVKPEKEWLSVSFRPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60
           MLGSSNSSRKK+QVKPEKEWLSVSFRPENFIPGLVIGFI G  LDLSKPSKGNAKKGYFL
Sbjct: 1   MLGSSNSSRKKQQVKPEKEWLSVSFRPENFIPGLVIGFIAGFLLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPASNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQ-------- 120
           PSKYQQ+SPASN+GDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYA+LMQ        
Sbjct: 61  PSKYQQISPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAQLMQSHRNLLRQ 120

Query: 121 ------------------RNKLKDAAETIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 167
                              NKLKDAAE +GLPTFVVADAGRTQVSAGSKTVLAIGPGPKE
Sbjct: 121 WELCGQPKIVVTCKNQQEMNKLKDAAENVGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 180

[Close]
BLAST of Lag0037484 vs. NCBI nr
Match: XP_022157462.1 (peptidyl-tRNA hydrolase 2, mitochondrial isoform X1 [Momordica charantia])

HSP 1 Score: 288.9 bits (738), Expect = 2.8e-74
Identity = 157/193 (81.35%), Postives = 161/193 (83.42%), Query Frame = 0 

Query: 1   MLGSSNSSRKKKQVKPEKEWLSVSFRPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60
           ML SSNSSRKK+QVKPEKEWLSVSFRPENFIPGLVIGFI GLFLDLSKPSKGNAK+GYFL
Sbjct: 1   MLKSSNSSRKKQQVKPEKEWLSVSFRPENFIPGLVIGFIFGLFLDLSKPSKGNAKRGYFL 60

Query: 61  PSKYQQLSPASNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQ-------- 120
           PSKYQQL+PASNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQ        
Sbjct: 61  PSKYQQLTPASNDGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120

Query: 121 ------------------RNKLKDAAETIGLPTFVVADAGRTQVSAGSKTVLAIGP-GPK 167
                              NKLKDAA+ IGLPTFVVADAGRTQVSAGSKTVLAIGP GPK
Sbjct: 121 WELCGQPKIVVTCKNQHEMNKLKDAADNIGLPTFVVADAGRTQVSAGSKTVLAIGPAGPK 180

[Close]
BLAST of Lag0037484 vs. ExPASy Swiss-Prot
Match: Q9Y3E5 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens OX=9606 GN=PTRH2 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.3e-18
Identity = 61/161 (37.89%), Postives = 83/161 (51.55%), Query Frame = 0 

Query: 33  GLVIGFILGLFLDLS-KPSKGNAKKGYFLPSKYQQLSPASNDGDQ-ELKLVLVVRQDLKM 92
           GL +G   G+ L  S +   G   K     +     S AS  GD  E K++LVVR DLKM
Sbjct: 18  GLAVGVACGMCLGWSLRVCFGMLPKSKTSKTHTDTESEASILGDSGEYKMILVVRNDLKM 77

Query: 93  GSGKIASQCAHAATGLYAELMQRN--------------------------KLKDAAETIG 152
           G GK+A+QC+HAA   Y ++ +RN                           L   A+ +G
Sbjct: 78  GKGKVAAQCSHAAVSAYKQIQRRNPEMLKQWEYCGQPKVVVKAPDEETLIALLAHAKMLG 137

Query: 153 LPTFVVADAGRTQVSAGSKTVLAIGPGPKESVDAVTGKLRL 166
           L   ++ DAGRTQ++ GS+TVL IGPGP + +D VTG L+L
Sbjct: 138 LTVSLIQDAGRTQIAPGSQTVLGIGPGPADLIDKVTGHLKL 178

[Close]
BLAST of Lag0037484 vs. ExPASy Swiss-Prot
Match: Q3ZBL5 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus OX=9913 GN=PTRH2 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 8.6e-18
Identity = 48/115 (41.74%), Postives = 67/115 (58.26%), Query Frame = 0 

Query: 77  ELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQRN---------------------- 136
           E K++LVVR DLKMG GK+A+QC+HAA   Y ++ +RN                      
Sbjct: 64  EYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPELLKEWEYCGQPKVVVKAPDE 123

Query: 137 ----KLKDAAETIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKESVDAVTGKLRL 166
               +L   A+ +GL   ++ DAGRTQ++ GS+TVL IGPGP + +D VTG L+L
Sbjct: 124 ETLVELLTHAKVLGLTVSLIQDAGRTQIAPGSRTVLGIGPGPADLIDKVTGHLKL 178

[Close]
BLAST of Lag0037484 vs. ExPASy Swiss-Prot
Match: Q8R2Y8 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus OX=10090 GN=Ptrh2 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.9e-17
Identity = 49/115 (42.61%), Postives = 66/115 (57.39%), Query Frame = 0 

Query: 77  ELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQRN---------------------- 136
           E K++LVVR DLKMG GK+A+QC+HAA   Y +  +R+                      
Sbjct: 66  EYKMILVVRTDLKMGKGKVAAQCSHAAVSAYKQTQRRSPQVLKEWEYCGQPKVVVKAPDE 125

Query: 137 ----KLKDAAETIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKESVDAVTGKLRL 166
               +L   A+T+GL   ++ DAGRTQ+  GS+TVL IGPGP E +D VTG L+L
Sbjct: 126 DTLIQLLTHAKTLGLTVSLIQDAGRTQIEPGSRTVLGIGPGPVELIDEVTGHLKL 180

[Close]
BLAST of Lag0037484 vs. ExPASy Swiss-Prot
Match: O13830 (Probable peptidyl-tRNA hydrolase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC19A8.14 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.7e-16
Identity = 66/195 (33.85%), Postives = 91/195 (46.67%), Query Frame = 0 

Query: 23  VSFRPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFLPSKYQQLSP--ASNDGDQE--- 82
           +S  P   + G V+GF++G    ++  S+G + K     S  ++ SP   SND D E   
Sbjct: 10  ISSFPAAVLVGAVVGFMIGRKYSVADASRGYSSKNANKASNPEKESPVSVSNDEDSESET 69

Query: 83  ---------------------LKLVLVVRQDLKMGSGKIASQCAHAATGLY--------- 142
                                 K+VLVVR DL M  GKIA+QCAHAA   Y         
Sbjct: 70  ELLDMLKGNSSLAALALAEGQTKMVLVVRTDLGMTKGKIAAQCAHAALACYKIASAVDPD 129

Query: 143 ----------------AELMQRNKLKDA-AETIGLPTFVVADAGRTQVSAGSKTVLAIGP 166
                           A+  +  +L  A A ++GL   V+ DAGRTQ+++GS TVL IGP
Sbjct: 130 LVRIWENAGQAKITLQAQTEETLELLQAQAMSLGLCARVIHDAGRTQIASGSATVLGIGP 189

[Close]
BLAST of Lag0037484 vs. ExPASy Swiss-Prot
Match: O97067 (Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster OX=7227 GN=CG1307 PE=2 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 3.1e-15
Identity = 49/118 (41.53%), Postives = 60/118 (50.85%), Query Frame = 0 

Query: 75  DQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQRN-------------------- 134
           +   K+VLVVR DLKMG GKIA+QC H A G Y   + R                     
Sbjct: 69  NDNFKMVLVVRNDLKMGKGKIAAQCGHGAVGAYQRAVVRTPRLLRSWENCGCAKIAVRVE 128

Query: 135 ------KLKDAAETIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKESVDAVTGKLRLL 167
                  +K  AE   L T ++ DAGRTQ+ A SKTVLA+GP     +D VTG L+LL
Sbjct: 129 SEAELMAIKKEAERQQLNTCLIRDAGRTQIEANSKTVLAVGPAAAADIDRVTGHLKLL 186

The following BLAST results are available for this feature:
BLAST of Lag0037484 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008466065.12.3e-7681.77PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial isoform X2 [Cucumis melo][more]
XP_022157533.11.1e-7581.77peptidyl-tRNA hydrolase 2, mitochondrial isoform X2 [Momordica charantia][more]
XP_004136220.11.5e-7580.73peptidyl-tRNA hydrolase 2, mitochondrial isoform X1 [Cucumis sativus] >KGN60321.... [more]
XP_022941498.15.7e-7580.21peptidyl-tRNA hydrolase 2, mitochondrial [Cucurbita moschata] >XP_022981057.1 pe... [more]
XP_022157462.12.8e-7481.35peptidyl-tRNA hydrolase 2, mitochondrial isoform X1 [Momordica charantia][more]
BLAST of Lag0037484 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9Y3E52.3e-1837.89Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens OX=9606 GN=PTRH2 PE=1 S... [more]
Q3ZBL58.6e-1841.74Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus OX=9913 GN=PTRH2 PE=2 SV=... [more]
Q8R2Y81.9e-1742.61Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus OX=10090 GN=Ptrh2 PE=1 ... [more]
O138304.7e-1633.85Probable peptidyl-tRNA hydrolase 2 OS=Schizosaccharomyces pombe (strain 972 / AT... [more]
O970673.1e-1541.53Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster OX=7227 GN=CG1307 ... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023476Peptidyl-tRNA hydrolase II domain superfamilyGENE3D3.40.1490.10Bit1coord: 73..113
e-value: 2.6E-14
score: 55.1
IPR023476Peptidyl-tRNA hydrolase II domain superfamilyGENE3D3.40.1490.10Bit1coord: 114..166
e-value: 3.4E-18
score: 67.6
IPR023476Peptidyl-tRNA hydrolase II domain superfamilySUPERFAMILY102462Peptidyl-tRNA hydrolase IIcoord: 77..166
IPR002833Peptidyl-tRNA hydrolase, PTH2PFAMPF01981PTH2coord: 115..166
e-value: 1.1E-15
score: 57.9
IPR002833Peptidyl-tRNA hydrolase, PTH2PANTHERPTHR12649PEPTIDYL-TRNA HYDROLASE 2coord: 5..115
IPR002833Peptidyl-tRNA hydrolase, PTH2PANTHERPTHR12649PEPTIDYL-TRNA HYDROLASE 2coord: 114..166
NoneNo IPR availablePANTHERPTHR12649:SF11PEPTIDYL-TRNA HYDROLASE 2, MITOCHONDRIALcoord: 114..166
coord: 5..115

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0037484.1Lag0037484.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005829 cytosol
cellular_component GO:0005739 mitochondrion
molecular_function GO:0004045 aminoacyl-tRNA hydrolase activity