Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTCGATCTTCCGCCTGGAAACATTGGCTAGTCGTTTCTCGGCGAGACCGTCGGCTGTCTCTAGCCCTACTCCGCCACCACCATCGGAGATTTCATGGAGAATCACATCAAGAGGTAAAAACCCCCACATTAAACGCTTGACTCTCTGTTTTTTTATTCTGTTTTCATTTAGTTGTTTTGGAGATCGAATCTTTCGCATACAGATATGGCAAAGTGTACAAGTCGAATCTGTTCGGAGAGCCGACGGTGGTATCGGCCGACGCCGGACTCAACCGGTACATACTAAGCTTGTTGTTCACCGGCCACGAGACGTCGTCTGTTGCCATAGCTCTGGCCATCTTCTTCCTCTCCAGCAGCCAGGTCGCCGTCCAACAGTTGACGGTAAGTCACTAGAAAAGATTTCCGAAGCCAATTTCCCATTTTTCTTCCTATTCTCTGATTTCTCAGAGTTCGAAATACAGGAAGAACACTTGGAGATTGCTAGAGCCAACAAGCGATTAGGAAAGATGAAATTGGATTGGGAAGATTACAAGAAAATCGAATTCACACAAGGTGTAATGAATAATTGA
mRNA sequence
ATGTCGTCGATCTTCCGCCTGGAAACATTGGCTAGTCGTTTCTCGGCGAGACCGTCGGCTGTCTCTAGCCCTACTCCGCCACCACCATCGGAGATTTCATGGAGAATCACATCAAGAGTTGTTTTGGAGATCGAATCTTTCGCATACAGATATGGCAAAGTGTACAAGTCGAATCTGTTCGGAGAGCCGACGGTGGTATCGGCCGACGCCGGACTCAACCGGTACATACTAAGCTTGTTGTTCACCGGCCACGAGACGTCGTCTGTTGCCATAGCTCTGGCCATCTTCTTCCTCTCCAGCAGCCAGGTCGCCGTCCAACAGTTGACGGAAGAACACTTGGAGATTGCTAGAGCCAACAAGCGATTAGGAAAGATGAAATTGGATTGGGAAGATTACAAGAAAATCGAATTCACACAAGGTGTAATGAATAATTGA
Coding sequence (CDS)
ATGTCGTCGATCTTCCGCCTGGAAACATTGGCTAGTCGTTTCTCGGCGAGACCGTCGGCTGTCTCTAGCCCTACTCCGCCACCACCATCGGAGATTTCATGGAGAATCACATCAAGAGTTGTTTTGGAGATCGAATCTTTCGCATACAGATATGGCAAAGTGTACAAGTCGAATCTGTTCGGAGAGCCGACGGTGGTATCGGCCGACGCCGGACTCAACCGGTACATACTAAGCTTGTTGTTCACCGGCCACGAGACGTCGTCTGTTGCCATAGCTCTGGCCATCTTCTTCCTCTCCAGCAGCCAGGTCGCCGTCCAACAGTTGACGGAAGAACACTTGGAGATTGCTAGAGCCAACAAGCGATTAGGAAAGATGAAATTGGATTGGGAAGATTACAAGAAAATCGAATTCACACAAGGTGTAATGAATAATTGA
Protein sequence
MSSIFRLETLASRFSARPSAVSSPTPPPPSEISWRITSRVVLEIESFAYRYGKVYKSNLFGEPTVVSADAGLNRYILSLLFTGHETSSVAIALAIFFLSSSQVAVQQLTEEHLEIARANKRLGKMKLDWEDYKKIEFTQGVMNN
Homology
BLAST of Lag0037058 vs. NCBI nr
Match:
XP_004149155.1 (cytochrome P450 90B1 [Cucumis sativus] >KGN53254.1 hypothetical protein Csa_014728 [Cucumis sativus])
HSP 1 Score: 62.0 bits (149), Expect = 4.8e-06
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0
Query: 44 IESFAYRYGKVYKSNLFGEPTVVSADAGLNRYIL 78
+E+ RYGKVYKSNLFGEPTVVSADAGLNRYIL
Sbjct: 64 MENHIRRYGKVYKSNLFGEPTVVSADAGLNRYIL 97
BLAST of Lag0037058 vs. ExPASy Swiss-Prot
Match:
O64989 (Cytochrome P450 90B1 OS=Arabidopsis thaliana OX=3702 GN=CYP90B1 PE=1 SV=2)
HSP 1 Score: 94.7 bits (234), Expect = 8.8e-19
Identity = 48/68 (70.59%), Postives = 58/68 (85.29%), Query Frame = 0
Query: 76 ILSLLFTGHETSSVAIALAIFFLSSSQVAVQQLTEEHLEIARANKRLGKMKLDWEDYKKI 135
ILSLLF GHETSSVAIALAIFFL + AV++L EEHLEIARA K LG+ +L+W+DYKK+
Sbjct: 305 ILSLLFAGHETSSVAIALAIFFLQACPKAVEELREEHLEIARAKKELGESELNWDDYKKM 364
Query: 136 EFTQGVMN 144
+FTQ V+N
Sbjct: 365 DFTQCVIN 372
HSP 2 Score: 56.2 bits (134), Expect = 3.5e-07
Identity = 23/28 (82.14%), Postives = 28/28 (100.00%), Query Frame = 0
Query: 50 RYGKVYKSNLFGEPTVVSADAGLNRYIL 78
+YGK+Y+SNLFGEPT+VSADAGLNR+IL
Sbjct: 74 KYGKIYRSNLFGEPTIVSADAGLNRFIL 101
BLAST of Lag0037058 vs. ExPASy Swiss-Prot
Match:
Q5CCK3 (Cytochrome P450 90B2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYP90B2 PE=1 SV=1)
HSP 1 Score: 83.2 bits (204), Expect = 2.7e-15
Identity = 43/68 (63.24%), Postives = 52/68 (76.47%), Query Frame = 0
Query: 76 ILSLLFTGHETSSVAIALAIFFLSSSQVAVQQLTEEHLEIARANKRLGKMKLDWEDYKKI 135
+LSLLF GHETSS+A+ALAIFFL AVQ+L EEHL IAR + G+ KL WEDYK++
Sbjct: 299 LLSLLFAGHETSSMALALAIFFLEGCPKAVQELREEHLGIARRQRLRGECKLSWEDYKEM 358
Query: 136 EFTQGVMN 144
FTQ V+N
Sbjct: 359 VFTQCVIN 366
HSP 2 Score: 54.7 bits (130), Expect = 1.0e-06
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0
Query: 44 IESFAYRYGKVYKSNLFGEPTVVSADAGLNRYIL 78
+E RYGK+Y+S+LFGE TVVSADAGLNRYIL
Sbjct: 83 MEQHIARYGKIYRSSLFGERTVVSADAGLNRYIL 116
BLAST of Lag0037058 vs. ExPASy Swiss-Prot
Match:
Q50EK6 (Abietadienol/abietadienal oxidase OS=Pinus taeda OX=3352 GN=CYP720B1 PE=1 SV=1)
HSP 1 Score: 65.5 bits (158), Expect = 5.7e-10
Identity = 43/113 (38.05%), Postives = 65/113 (57.52%), Query Frame = 0
Query: 31 EISWRITSRVVLEIESFAYRYGKVYKSNLFGEPTVVSADAGLNRYILSLLFTGHETSSVA 90
E+ R S ++ E + K + L E ++ +D + +IL LLF GHETSS A
Sbjct: 242 ELLIRKISNMIKERRDHPHIVHKDLLTKLLEEDSI--SDEIICDFILFLLFAGHETSSRA 301
Query: 91 IALAIFFLSSSQVAVQQLTEEHLEIARANKRLGKMKLDWEDYKKIEFTQGVMN 144
+ AI FL++ A+ Q+ EEH I +A + G KL+W+DYK ++FTQ V+N
Sbjct: 302 MTFAIKFLTTCPKALTQMKEEHDAILKA--KGGHKKLEWDDYKSMKFTQCVIN 350
BLAST of Lag0037058 vs. ExPASy Swiss-Prot
Match:
Q50EK5 (Cytochrome P450 720B2 OS=Pinus taeda OX=3352 GN=CYP720B2 PE=2 SV=1)
HSP 1 Score: 59.7 bits (143), Expect = 3.2e-08
Identity = 33/91 (36.26%), Postives = 53/91 (58.24%), Query Frame = 0
Query: 53 KVYKSNLFGEPTVVSADAGLNRYILSLLFTGHETSSVAIALAIFFLSSSQVAVQQLTEEH 112
K+ K + F E + +IL LLF GHETSS +++ AI FL+ A+++L EH
Sbjct: 269 KLLKEDSFSEEIIAD-------FILFLLFAGHETSSRSMSFAIKFLTDCPRALEELKAEH 328
Query: 113 LEIARANKRLGKMKLDWEDYKKIEFTQGVMN 144
+ + L KL+W+DY+ ++FTQ V++
Sbjct: 329 DALLKRKGNLKNQKLNWDDYQSLKFTQCVIH 352
BLAST of Lag0037058 vs. ExPASy Swiss-Prot
Match:
Q2RAP4 (Cytochrome P450 90A3 OS=Oryza sativa subsp. japonica OX=39947 GN=CYP90A3 PE=2 SV=1)
HSP 1 Score: 53.9 bits (128), Expect = 1.7e-06
Identity = 29/69 (42.03%), Postives = 43/69 (62.32%), Query Frame = 0
Query: 75 YILSLLFTGHETSSVAIALAIFFLSSSQVAVQQLTEEHLEIARANKRLGKMKLDWEDYKK 134
+ LSLL G+ET+S+ + LA+ FL+ + A+ +L EEH I + K L+W DYK
Sbjct: 297 FCLSLLVAGYETTSMLMTLAVKFLTETPAALAELKEEHANIRDMKGK--KQPLEWSDYKS 356
Query: 135 IEFTQGVMN 144
+ FTQ V+N
Sbjct: 357 MPFTQCVIN 363
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_004149155.1 | 4.8e-06 | 85.29 | cytochrome P450 90B1 [Cucumis sativus] >KGN53254.1 hypothetical protein Csa_0147... | [more] |
Pages
Match Name | E-value | Identity | Description | |
O64989 | 8.8e-19 | 70.59 | Cytochrome P450 90B1 OS=Arabidopsis thaliana OX=3702 GN=CYP90B1 PE=1 SV=2 | [more] |
Q5CCK3 | 2.7e-15 | 63.24 | Cytochrome P450 90B2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYP90B2 PE=1 SV... | [more] |
Q50EK6 | 5.7e-10 | 38.05 | Abietadienol/abietadienal oxidase OS=Pinus taeda OX=3352 GN=CYP720B1 PE=1 SV=1 | [more] |
Q50EK5 | 3.2e-08 | 36.26 | Cytochrome P450 720B2 OS=Pinus taeda OX=3352 GN=CYP720B2 PE=2 SV=1 | [more] |
Q2RAP4 | 1.7e-06 | 42.03 | Cytochrome P450 90A3 OS=Oryza sativa subsp. japonica OX=39947 GN=CYP90A3 PE=2 SV... | [more] |