Lag0036932 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0036932
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Integrase-type DNA-binding superfamily protein
Location	chr2: 2222836 .. 2227193 (+)
RNA-Seq Expression	Lag0036932
Synteny	Lag0036932

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCCGTGCCCACGACGTCGCAACCTTCAGCATCAAAGGCTCCTCCGCCACCCTCAATTTCCCCGACCTCCTCCACCTCCTCCCCCGCCCCGTCTCCCTCGCCCCTCGCGACGTCCAAGCCGCCGCCGCCAAGGCCGCCCACATGCACAACCTCGACCTCGACGACCACCACTCCCACGTCGACGACGACCTCACCGAGATCATCCAACTCCCCACCCTCGGCCTCCGATCCATCCACCGAAAAAGTAGAGAAGAAAATAGAAAGGGCAATTTAGTAATTTTACCTTTTAGATGGCAATATTTTGCCATTTTTGCAAATAGTTTCAATGGCTGCTATTTTTGTAATTATTTTGGGCCGGTTTGCTACTTTTGCAACCGGCCCAAAAAAAATTGTATATATACTTATAATAACTAGTAATAAATATATGCCACGAAGTATAATTTTTTATAATTGTAATAGGATTTTAGGAGGGAATAATTTAAATTTAAATGAAATCAAGCCACCATCAAACCATTTCAACTATATACATGTATATTTCAAATATCTACATAAACTACTACACATTTATAAATTGTAATTGGTTAGATTACCAAGAATTATAATTAATGGGTTGATAATCTAAACTATGTTTTTTTTTTTTTTTGGACAATATGTGGGAATGGAAGATTCGAACCACAGATCTCGTGGTCAACCATCTAACTTTATGGCCAACAAGAGTATGGCTCAACTGGCATAAAATTGTACTGATAATCACGAGGTCTGTGGTTCAAATCTCCTACCTCCATATTGTCAAAAAAAAAAAAAAAATCCAATTTTATGTCAATTGAGCTATAATTAATACACGTTGATAATCTTTAAATGATGTTTAATTATCATTTTAAATAATATATTAATAACAATCATAGTTTAGTTTTTACTTCAAGGTAGATTTCCAATAACTATAATCAATACAAGTTGATAATCTTAAAACACACACACCCATTAAATACCTATCCATTCATATTTCAAAAGCTCAAGTAACCAAACACTTTTTCACGAAACACTATGATATTAACCTAACCTATCAATTCAATTCTCAACTAATCCCGATATTTTATTGTAGTAAAACTATAACTGTATGACAGAAAGAAAGATCATTTCAATGACTAATTCTTCAAATTCGCTTTATCATTCTACATCATCTGCTGGGTATGCATGTACAGTAGAATATATCTTCCTAACCCTAACCTTGTACTCATATCAACAAAAAAAGAACAGAGGGAAAAAATATTTAACTGGAAAAGTTTGTACATAGAACAAATTTTCAGGCTGATGGCTGAAAGCCTGAAACTTCTATGCTACGTTAGCATTCAGATTATACACGATGCCACTTGAATTCTGGTCGAGAAAGCGGCAGCATCAACAAATATATCAGAAGCTTGTGCCAGCCCTCCTCTATGACTATGTACAAATATATGCCGCTACAAAAATGATGGGGAGTGGTTTCCTAACCATAGCGAGCTTTCAACTTCTGCAAAAATTCTAATGTCTCTGTGTATGAAGGGTCAGTTCGACTGAGGGGTTTACACGAATTTATGTGATCTGTCGATTCTAACACCTGTATTGTGATTAAAAAGAGGGAAGATTCGTAAGACAAACGCTGTTTTGCAGCAAGATTGATTAACAAGATTCAAATTCTACAATAGTCGAGAGCTCAAAAAAGGGAAAATGAAAAACTGGAATATCAAAATACTGAGCTAACGAGAAAAGAGAGACCAGCAGTCCTTGAATATTGCTCCTAATTGTTTCTTATTCTTCTGTTTTGATATCCAAGAATGCTCAGACCTATTTAGCGTCCTCAATCATTCTCATGGACAACCGTCTAACCGTACCACATTTGATTATCAAGGTAACTCGTAAGAAATCAAATTTTAGATAGGGGCACCCCCCTATGAGTTCAAAATTAATGGAACTTTCCTAACTCCCAAGGAGATTCTTAATTCAACTTTCCTAACTACCAAGGAGATGCTCTAAGAAGGTATTTGGTTGGTGTTTTCAGAATCTGCTGTTTTCAATTTTTTTTTGGCAGGAGAGAGAGAGGAGATGGAGAGAGATGCGGAGGGAGGGGGAAGTATTCTATTCAAGGTAAATTAATTTAGTGAACCAATAACTTTTGGCAGTTAAAACCTAGGAAAGAAATATGCATATTTGATTTTGAAATATTTTGACTTTCATGCAAAACCAAATACAACTATCTAACATTCATCAAAAATCTCGTAGGATCCTAAACACTCCACTCTTAGTTATTGATACGAGCCCCTCCAATAAAGTCAGAAAACAGAAGGAACCACAGAAGAAGATCGTATACCCAATACAAAACCATGAAATATAAAAACTAAAGATGATTTTAACTAGTTACCTATCATTAATAGAAAATACATGATAAAATTGATAAAGCTAAAATCAGAAAGAACGCATTAGAGAACCACATGAAGACCAATACCAGAACAGCAATAGCATGCACTATCCATTACTGTTTCACCATTTTACCCAACAGTATCATAAAGAATGCCTATCTGGGACATATTTATGACAAGAAATACAGCTTATAACTCTATTTAATAAAATTAGGGTACATAATATTCATGAAAACCACGTCTTCTGAAACGGTTGGGGATTGTCTTGCAAATGGAAAGAGAGGCATCCTTTTAAAGCTTGATTATGAAAAGGCTTATGATAAAGTTGATTGGGATTACTTGGACTTCATCTTGAAAAAGAAAGGCTTTGGGAATAGATGGAGAAGATGGGTGAGGGGATGTTTGACTACGACAAATTTCTCAATTTTTCTAAATGGTAGATCCCAGGGGAAGATTGTGGCTAAGAGGGGGCTAAGACAAGGGGACCCCTTGTCCCCTTTTCTTTTCACGTTGATGGTGGATTCCTTTAGTAGATTAATCCATTTTTGCTGTGAGAAGAGAGTTCTTAGAGGTATCCAGGTTGGTTCGGGCAGGGGCTCGGTTACGCACCTCCAACCAATATGCTGATGATACGGTTATCTTCACTCCAGCCAAGAAAAGGATTCTTAAAAGATGGTGGTTGGTTATTTCTCTATTCCTTCAAATTTCAGGCCTATCCTTAAACGTCTCGAAGACTTCTATTATAGGCCTTAATGTGTCTAAAGAGTGGTTGTCTGATCTTGCTGCTAGATTTGGGTGTAAGATTGAATCTCTGTCGTTTAAATGTTTGGGCTTTCCTCTTGGAGGAAACCACAGGTCACTTGCTTTTTGGGATCCGATAGTAGAGAAATTTAAGATGAAGCTTGACAAATGGATTCGATTCCTATTTCGAAAGGGGGGAGGCTAACCTTGGCTCAATCAGTGTTAAACAGCATCCCGGTCTATTATTTTTCCGTTTTAAAAGCTCCAGTGGGGGCCACTAAGAAGTTGGAAAAACTGGTTAGAGACTTCTTTTGGGGAAATAAGGAGAACTCAGGGTGTAGCCACTAGGTGAATTGGGCGAAGACCTCTCTTCCTTTACATCCCGACGGTCTAAGGGTTGGAGCCTACCAACAGAAAAATAATGCCCTCCTTTCAAAATGGTTATGGCGTTTTTGTCATCAAGAAAAGGCCTTATGGAGGAAAGTCGTGGTCAGTATTTATGGGTTGGACCAAAGAGGGTGGTGTACCCTTCCCCCGAATGGCAAATCTAGAGGAAGACCTTGGATTGACATTATGAAAACTGGGATTTGGTTCAATAATTTCATCAAATTCAAAGTGAAGGAGGGCTCCAAAGTGCTTTTTTGGAGGGATATTTGGGCTGGGAATGATAGCCTAGCCTCCACATTCCCTGATTTAATTAATATTTCCATGAAACAAGAGGCTACTGTTGAGTAATGCTGGAATGCGAAGTCCAATGACTGGGATTTGGGGTTTAGAAGAGGCCTCTTTGACTGGGAGATTCCTAGTTGGGTTGGGCTGATTGAGATCCTCGATACTATTAGCTTGGGTGGTGGCAGAGACGTTTGTTTATGGAGTCTTGAGAAATCTGGGATCTTCTCCTCCAAATCGGCCTTTTGGAAATTATCAGATTCCTCCCCCTCCCTCAAGACCCCGTTGATCGATGCCATCTGGAAGAACCATGCCCCAAAGAAGGTTAAGGTTTTTCTTTGGTCTGGTCCCTTGCCCATAGAAGCCTTAACACTTCAGACCTTCCTTAGAAAAAGTGCAGAAATAGAATGCTCTCCCCTTTGGTGTGCCCCCTGTGCTGGGCAAATTCGGAATCCCTTGACCATCTTTTCCTCCTTCGTCCTTTTGCTGCTGCGAGTTGGGGTGGCTGCTGGGGGAATTCAACCTCTCCATTCCCTTGTCGGATAA

mRNA sequence

ATGGCCGCCCGTGCCCACGACGTCGCAACCTTCAGCATCAAAGGCTCCTCCGCCACCCTCAATTTCCCCGACCTCCTCCACCTCCTCCCCCGCCCCGTCTCCCTCGCCCCTCGCGACGTCCAAGCCGCCGCCGCCAAGGCCGCCCACATGCACAACCTCGACCTCGACGACCACCACTCCCACGTCGACGACGACCTCACCGAGATCATCCAACTCCCCACCCTCGGCCTCCGATCCATCCACCGAAAAAAATGCTCAGACCTATTTAGCGTCCTCAATCATTCTCATGGACAACCGTCTAACCGTACCACATTTGATTATCAAGGGTACATAATATTCATGAAAACCACGTCTTCTGAAACGGTTGGGGATTGTCTTGCAAATGGAAAGAGAGGCATCCTTTTAAAGCTTGATTATGAAAAGGCTTATGATAAAGTTGATTGGGATTACTTGGACTTCATCTTGAAAAAGAAAGGCTTTGGGAATAGATGGAGAAGATGGGTGAGGGGATGTTTGACTACGACAAATTTCTCAATTTTTCTAAATGGTAGATCCCAGGGGAAGATTGTGGCTAAGAGGGGGCTAAGACAAGGGGACCCCTTGTCCCCTTTTCTTTTCACGTTGATGGTGGATTCCTTTAGTAGATTAATCCATTTTTGCTGTGAGAAGAGAGTTCTTAGAGGCCTATCCTTAAACGTCTCGAAGACTTCTATTATAGGCCTTAATGTGTCTAAAGAGTGGTTGTCTGATCTTGCTGCTAGATTTGGGTGTAAGATTGAATCTCTGTCGTTTAAATGTTTGGGCTTTCCTCTTGGAGGAAACCACAGAAGAGGCCTCTTTGACTGGGAGATTCCTAGTTGGGTTGGGCTGATTGAGATCCTCGATACTATTAGCTTGGGTGGTGGCAGAGACGTTTGTTTATGGAGTCTTGAGAAATCTGGGATCTTCTCCTCCAAATCGGCCTTTTGGAAATTATCAGATTCCTCCCCCTCCCTCAAGACCCCGTTGATCGATGCCATCTGGAAGAACCATGCCCCAAAGAAGGTTAAGGTTTTTCTTTGGTCTGGTCCCTTGCCCATAGAAGCCTTAACACTTCAGACCTTCCTTAGAAAAAGTGCAGAAATAGAATGCTCTCCCCTTTGGTGTGCCCCCTGTGCTGGGCAAATTCGGAATCCCTTGACCATCTTTTCCTCCTTCGTCCTTTTGCTGCTGCGAGTTGGGGTGGCTGCTGGGGGAATTCAACCTCTCCATTCCCTTGTCGGATAA

Coding sequence (CDS)

ATGGCCGCCCGTGCCCACGACGTCGCAACCTTCAGCATCAAAGGCTCCTCCGCCACCCTCAATTTCCCCGACCTCCTCCACCTCCTCCCCCGCCCCGTCTCCCTCGCCCCTCGCGACGTCCAAGCCGCCGCCGCCAAGGCCGCCCACATGCACAACCTCGACCTCGACGACCACCACTCCCACGTCGACGACGACCTCACCGAGATCATCCAACTCCCCACCCTCGGCCTCCGATCCATCCACCGAAAAAAATGCTCAGACCTATTTAGCGTCCTCAATCATTCTCATGGACAACCGTCTAACCGTACCACATTTGATTATCAAGGGTACATAATATTCATGAAAACCACGTCTTCTGAAACGGTTGGGGATTGTCTTGCAAATGGAAAGAGAGGCATCCTTTTAAAGCTTGATTATGAAAAGGCTTATGATAAAGTTGATTGGGATTACTTGGACTTCATCTTGAAAAAGAAAGGCTTTGGGAATAGATGGAGAAGATGGGTGAGGGGATGTTTGACTACGACAAATTTCTCAATTTTTCTAAATGGTAGATCCCAGGGGAAGATTGTGGCTAAGAGGGGGCTAAGACAAGGGGACCCCTTGTCCCCTTTTCTTTTCACGTTGATGGTGGATTCCTTTAGTAGATTAATCCATTTTTGCTGTGAGAAGAGAGTTCTTAGAGGCCTATCCTTAAACGTCTCGAAGACTTCTATTATAGGCCTTAATGTGTCTAAAGAGTGGTTGTCTGATCTTGCTGCTAGATTTGGGTGTAAGATTGAATCTCTGTCGTTTAAATGTTTGGGCTTTCCTCTTGGAGGAAACCACAGAAGAGGCCTCTTTGACTGGGAGATTCCTAGTTGGGTTGGGCTGATTGAGATCCTCGATACTATTAGCTTGGGTGGTGGCAGAGACGTTTGTTTATGGAGTCTTGAGAAATCTGGGATCTTCTCCTCCAAATCGGCCTTTTGGAAATTATCAGATTCCTCCCCCTCCCTCAAGACCCCGTTGATCGATGCCATCTGGAAGAACCATGCCCCAAAGAAGGTTAAGGTTTTTCTTTGGTCTGGTCCCTTGCCCATAGAAGCCTTAACACTTCAGACCTTCCTTAGAAAAAGTGCAGAAATAGAATGCTCTCCCCTTTGGTGTGCCCCCTGTGCTGGGCAAATTCGGAATCCCTTGACCATCTTTTCCTCCTTCGTCCTTTTGCTGCTGCGAGTTGGGGTGGCTGCTGGGGGAATTCAACCTCTCCATTCCCTTGTCGGATAA

Protein sequence

MAARAHDVATFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHHSHVDDDLTEIIQLPTLGLRSIHRKKCSDLFSVLNHSHGQPSNRTTFDYQGYIIFMKTTSSETVGDCLANGKRGILLKLDYEKAYDKVDWDYLDFILKKKGFGNRWRRWVRGCLTTTNFSIFLNGRSQGKIVAKRGLRQGDPLSPFLFTLMVDSFSRLIHFCCEKRVLRGLSLNVSKTSIIGLNVSKEWLSDLAARFGCKIESLSFKCLGFPLGGNHRRGLFDWEIPSWVGLIEILDTISLGGGRDVCLWSLEKSGIFSSKSAFWKLSDSSPSLKTPLIDAIWKNHAPKKVKVFLWSGPLPIEALTLQTFLRKSAEIECSPLWCAPCAGQIRNPLTIFSSFVLLLLRVGVAAGGIQPLHSLVG

Homology

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BLAST of Lag0036932 vs. NCBI nr
Match: CAN77848.1 (hypothetical protein VITISV_020832 [Vitis vinifera])

HSP 1 Score: 181.0 bits (458), Expect = 2.1e-41
Identity = 97/272 (35.66%), Postives = 146/272 (53.68%), Query Frame = 0


Query: 118  SSETVGDCLANGKRGILLKLDYEKAYDKVDWDYLDFILKKKGFGNRWRRWVRGCLTTTNF 177
            ++E V +   +G+ G++ K+D+EKAYD V WD+LD +L+KKGF  +WR+W+ GCL++ ++
Sbjct: 1226 ANEIVDERRRSGEEGVVFKIDFEKAYDHVRWDFLDQVLEKKGFSPKWRKWMSGCLSSVSY 1285

Query: 178  SIFLNGRSQGKIVAKRGLRQGDPLSPFLFTLMVDSFSRLIHFCCEKRVLR---------- 237
            ++ +NG ++G + A RGLRQGDPLSPFLFTL+ D  SR++    ++ +L           
Sbjct: 1286 AVLVNGSAKGWVKASRGLRQGDPLSPFLFTLVADJLSRMLLRAEKRNMLEGFRTLKSLLL 1345

Query: 238  ------GLSLNVSKTSIIGLNVSKEWLSDLAARFGCKIESLSFKCLGFPLGG-------- 297
                  GL +++ K++I G+N+ +  +S L     CK        LG PLGG        
Sbjct: 1346 AFGHISGLKVSLDKSNIYGINLDQAHISRLVETLECKASGWPILYLGLPLGGNPRAVLGP 1405

Query: 298  --------NHRRGLFDWEIPSWVGLIEILDTISLGGG-RDVCLWSLEKSGIFSSKSAFWK 357
                    N RR L D+EI    GL+  LD + L     D   W L   G+FS K  F  
Sbjct: 1406 TRPFSRNLNFRRNLSDYEIEDLEGLMRSLDGLHLSPSVPDARFWPLSSXGLFSVKXFFLA 1465

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BLAST of Lag0036932 vs. NCBI nr
Match: XP_022158566.1 (uncharacterized protein LOC111025019 [Momordica charantia])

HSP 1 Score: 169.9 bits (429), Expect = 4.8e-38
Identity = 81/192 (42.19%), Postives = 114/192 (59.38%), Query Frame = 0


Query: 146 VDWDYLDFILKKKGFGNRWRRWVRGCLTTTNFSIFLNGRSQGKIVAKRGLRQGDPLSPFL 205
           VDW +LD +L +KGFG RWR W++GC+++ NFS+F+NGR +GKI A RGLRQGDPLSPFL
Sbjct: 2   VDWCFLDVVLLQKGFGKRWRMWIKGCVSSANFSVFINGRPRGKIFATRGLRQGDPLSPFL 61

Query: 206 FTLMVDSFSRLIHFCCEKRVLR-------------------------------------- 265
           FTL+ DSFSRL++FCCE+R+++                                      
Sbjct: 62  FTLIGDSFSRLVNFCCERRIIQGFAVGRERIVVSHLRYADDTIIFCPAYKGNLDRWWALI 121

Query: 266 -------GLSLNVSKTSIIGLNVSKEWLSDLAARFGCKIESLSFKCLGFPLGGNHRRGLF 293
                  GL +N++KTS+IG+N+ +   +    + GC++E +SF+ LG PLGGNHR  +F
Sbjct: 122 SLFIKGSGLRINLAKTSLIGINIGENEATSKVDKIGCRVERMSFRYLGLPLGGNHRVIVF 181

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BLAST of Lag0036932 vs. NCBI nr
Match: CAN72476.1 (hypothetical protein VITISV_022512 [Vitis vinifera])

HSP 1 Score: 169.5 bits (428), Expect = 6.3e-38
Identity = 97/299 (32.44%), Postives = 145/299 (48.49%), Query Frame = 0


Query: 118  SSETVGDCLANGKRGILLKLDYEKAYDKVDWDYLDFILKKKGFGNRWRRWVRGCLTTTNF 177
            ++E V +   +G+ G++ K+D+EKAYD + WD+LD +L+KKGF  +WR+W+ GCL++ ++
Sbjct: 1181 ANEIVDERRRSGEEGVVFKIDFEKAYDYIRWDFLDQVLEKKGFXPKWRKWMSGCLSSVSY 1240

Query: 178  SIFLNGRSQGKIVAKRGLRQGDPLSPFLFTLMVDSFSRLIHFCCEKRVLR---------- 237
            ++ +NG ++G + A RGLRQGDPLSPFLFTL+ D  SR++    ++ +L           
Sbjct: 1241 AVLVNGSAKGWVKASRGLRQGDPLSPFLFTLVADVLSRMLLRAEKRNMLEGFRVGRNRTR 1300

Query: 238  -----------------------------------GLSLNVSKTSIIGLNVSKEWLSDLA 297
                                               GL +N+ K++I  +N+ +  +S LA
Sbjct: 1301 VSHLQFADDTIFFSNTREEDLQTLKSLLLAFGHISGLKVNLDKSNIYXINLDQXHISRLA 1360

Query: 298  ARFGCKIESLSFKCLGFPLGG----------------NHRRGLFDWEIPSWVGLIEILDT 355
                CK        LG PLG                 N RR L D EI     L+  LD 
Sbjct: 1361 ETLECKASGXPILYLGLPLGXNPRAVLGLTRPFSWNLNFRRNLSDSEIEDLEXLMRSLDG 1420

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BLAST of Lag0036932 vs. NCBI nr
Match: RVW62473.1 (putative mitochondrial protein [Vitis vinifera])

HSP 1 Score: 167.2 bits (422), Expect = 3.1e-37
Identity = 71/157 (45.22%), Postives = 109/157 (69.43%), Query Frame = 0


Query: 118 SSETVGDCLANGKRGILLKLDYEKAYDKVDWDYLDFILKKKGFGNRWRRWVRGCLTTTNF 177
           ++E V +   +G+ G++ K+D+EKAYD V WD+LD +L+KKGF ++WR W+RGCL++ ++
Sbjct: 319 ANEIVDEKKRSGEEGVVFKIDFEKAYDHVKWDFLDHVLEKKGFSSKWRSWMRGCLSSVSY 378

Query: 178 SIFLNGRSQGKIVAKRGLRQGDPLSPFLFTLMVDSFSRLIHFCCEKRVLRGLSLNVSKTS 237
           +I +NG ++G + A RGLRQGDPLSPFLFT++ D  SR++    E+ +L G  +N+ K++
Sbjct: 379 AILVNGNAKGWVKAARGLRQGDPLSPFLFTIVADVLSRMLLKAEERNLLEGFRVNLDKSN 438

Query: 238 IIGLNVSKEWLSDLAARFGCKIESLSFKCLGFPLGGN 275
           + G+N+ +  LS LA    CK        LG PLGGN
Sbjct: 439 LFGINLDQNHLSRLALLLDCKASDWPILYLGLPLGGN 475

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BLAST of Lag0036932 vs. NCBI nr
Match: CAN78744.1 (hypothetical protein VITISV_014186 [Vitis vinifera])

HSP 1 Score: 164.5 bits (415), Expect = 2.0e-36
Identity = 106/350 (30.29%), Postives = 149/350 (42.57%), Query Frame = 0


Query: 118  SSETVGDCLANGKRGILLKLDYEKAYDKVDWDYLDFILKKKGFGNRWRRWVRGCLTTTNF 177
            ++E V +   +GK G++ K+D+EKAYD V WD+LD +L+KKGF  RWR+W+ GCL++ ++
Sbjct: 1223 ANEIVDERRRSGKEGVVFKIDFEKAYDHVKWDFLDHVLEKKGFSPRWRKWMSGCLSSVSY 1282

Query: 178  SIFLNGRSQGKIVAKRGLRQGDPLSPFLFTLMVDSFSRLIHFCCEKRVLR---------- 237
            +I +NG ++G + A RGLRQGDPLSPFLFTL+ D  SR++    E+ ++           
Sbjct: 1283 AILVNGSAKGWVKASRGLRQGDPLSPFLFTLVADVLSRMLKRAEERNMMECFRVGRNRIR 1342

Query: 238  -----------------------------------GLSLNVSKTSIIGLNVSKEWLSDLA 297
                                                L +N++K+SI  +N+ +  LS LA
Sbjct: 1343 VSHLQFADDTIFFSNSREEELQTLKSLLLVFGHISRLKVNLNKSSIYDINLDQAHLSRLA 1402

Query: 298  ARFGCKIESLSFKCLGFPLGG--------------------------------------- 355
                CK+       LG PLG                                        
Sbjct: 1403 VMLDCKVSEWPILYLGLPLGRNPKACGFWDPMIERISRNGERIRFWEDLWWGDQPLGTQY 1462

[Close]

BLAST of Lag0036932 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.6e-12
Identity = 46/102 (45.10%), Postives = 57/102 (55.88%), Query Frame = 0


Query: 1   MAARAHDVATFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHN-------- 60
           MAARAHDVA  SIKG++A LNFP+L    PRPVSL+PRD+Q AA KAAHM          
Sbjct: 85  MAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSST 144

Query: 61  ------------------LDLDDHHSHVDDDLTEIIQLPTLG 77
                             +DL    S   ++L EI++LP+LG
Sbjct: 145 SSSSSLSSTSSLESLVLVMDLSRTES---EELGEIVELPSLG 183

[Close]

BLAST of Lag0036932 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.6e-12
Identity = 37/50 (74.00%), Postives = 40/50 (80.00%), Query Frame = 0


Query: 1   MAARAHDVATFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHM 51
           MAARAHDVA  SIKG+SA LNFPDL    PRP SL+PRD+Q AA KAAHM
Sbjct: 70  MAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHM 119

[Close]

BLAST of Lag0036932 vs. ExPASy Swiss-Prot
Match: Q52QU1 (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 GN=ERF042 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.1e-12
Identity = 42/69 (60.87%), Postives = 49/69 (71.01%), Query Frame = 0


Query: 1   MAARAHDVATFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHHS 60
           MAARAHDVA  SIKGSSA LNFP+L   LPRPVSL+ +D+QAAAA+AA M   D      
Sbjct: 60  MAARAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALM---DFKTVPF 119

Query: 61  HVDDDLTEI 70
           H+ DD T +
Sbjct: 120 HLQDDSTPL 125

[Close]

BLAST of Lag0036932 vs. ExPASy Swiss-Prot
Match: Q9M080 (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.7e-12
Identity = 42/68 (61.76%), Postives = 48/68 (70.59%), Query Frame = 0


Query: 1   MAARAHDVATFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHHS 60
           MA RAHDVA  SIKG+SA LNFP+L  LLPRPVSL+PRDV+AAA KAA M   D D    
Sbjct: 53  MAMRAHDVAAMSIKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALM---DFDTTAF 112

Query: 61  HVDDDLTE 69
             D + +E
Sbjct: 113 RSDTETSE 117

[Close]

BLAST of Lag0036932 vs. ExPASy Swiss-Prot
Match: Q9M210 (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 GN=ERF035 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 4.0e-11
Identity = 48/129 (37.21%), Postives = 64/129 (49.61%), Query Frame = 0


Query: 1   MAARAHDVATFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHHS 60
           MAARAHDVA  +IKG+S  LNFP+L  LLPRPVS +P+D+QAAA KAA            
Sbjct: 105 MAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAATKAAEATTWHKPVIDK 164

Query: 61  HVDDDLTEIIQLPTLGLRSIHRKKCSDLFSVLNHSHGQPSNRTTFDYQGYIIFMKTTSSE 120
            + D+L+    L T    +      S   S  + +  + +  T FD     +F     + 
Sbjct: 165 KLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDKESNEETVFDLPD--LFTDGLMNP 224

Query: 121 TVGDCLANG 130
               CL NG
Sbjct: 225 NDAFCLCNG 231

[Close]

BLAST of Lag0036932 vs. ExPASy TrEMBL
Match: A5AE29 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_020832 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 7.8e-42
Identity = 97/272 (35.66%), Postives = 146/272 (53.68%), Query Frame = 0


Query: 118  SSETVGDCLANGKRGILLKLDYEKAYDKVDWDYLDFILKKKGFGNRWRRWVRGCLTTTNF 177
            ++E V +   +G+ G++ K+D+EKAYD V WD+LD +L+KKGF  +WR+W+ GCL++ ++
Sbjct: 1226 ANEIVDERRRSGEEGVVFKIDFEKAYDHVRWDFLDQVLEKKGFSPKWRKWMSGCLSSVSY 1285

Query: 178  SIFLNGRSQGKIVAKRGLRQGDPLSPFLFTLMVDSFSRLIHFCCEKRVLR---------- 237
            ++ +NG ++G + A RGLRQGDPLSPFLFTL+ D  SR++    ++ +L           
Sbjct: 1286 AVLVNGSAKGWVKASRGLRQGDPLSPFLFTLVADXLSRMLLRAEKRNMLEGFRTLKSLLL 1345

Query: 238  ------GLSLNVSKTSIIGLNVSKEWLSDLAARFGCKIESLSFKCLGFPLGG-------- 297
                  GL +++ K++I G+N+ +  +S L     CK        LG PLGG        
Sbjct: 1346 AFGHISGLKVSLDKSNIYGINLDQAHISRLVETLECKASGWPILYLGLPLGGNPRAVLGP 1405

Query: 298  --------NHRRGLFDWEIPSWVGLIEILDTISLGGG-RDVCLWSLEKSGIFSSKSAFWK 357
                    N RR L D+EI    GL+  LD + L     D   W L   G+FS K  F  
Sbjct: 1406 TRPFSRNLNFRRNLSDYEIEDLEGLMRSLDGLHLSPSVPDARFWPLSSXGLFSVKXFFLA 1465

[Close]

BLAST of Lag0036932 vs. ExPASy TrEMBL
Match: A0A803PZR9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.9e-40
Identity = 85/194 (43.81%), Postives = 122/194 (62.89%), Query Frame = 0


Query: 118 SSETVGDCLANGKRGILLKLDYEKAYDKVDWDYLDFILKKKGFGNRWRRWVRGCLTTTNF 177
           ++ETV D  + GK G++ K+D+EKAYD+V+WD+LD ++ KKGFG+ WR+W+RGCL+TT+F
Sbjct: 497 ANETVEDYRSRGKSGMVFKIDFEKAYDRVEWDFLDLVMHKKGFGSTWRKWIRGCLSTTSF 556

Query: 178 SIFLNGRSQGKIVAKRGLRQGDPLSPFLFTLMVDSFSRLIH------------------- 237
           SIF+NGR +GK  A RGLRQGDPLSPFLFTL+ D   R++                    
Sbjct: 557 SIFVNGRPRGKFRASRGLRQGDPLSPFLFTLVADILGRMVDKAVNSGSLSGFRVGKDKIQ 616

Query: 238 ---------FCCEKRVLRGLSLNVSKTSIIGLNVSKEWLSDLAARFGCKIESLSFKCLGF 284
                    FC     L GL +N+SK+ ++GL + +  +S  AA+ GC++     K LG 
Sbjct: 617 ISHLQFVKGFC----ALSGLKVNLSKSQLLGLCMDELVVSQCAAQIGCEVGCWPMKYLGM 676

[Close]

BLAST of Lag0036932 vs. ExPASy TrEMBL
Match: A0A6J1E196 (uncharacterized protein LOC111025019 OS=Momordica charantia OX=3673 GN=LOC111025019 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.3e-38
Identity = 81/192 (42.19%), Postives = 114/192 (59.38%), Query Frame = 0


Query: 146 VDWDYLDFILKKKGFGNRWRRWVRGCLTTTNFSIFLNGRSQGKIVAKRGLRQGDPLSPFL 205
           VDW +LD +L +KGFG RWR W++GC+++ NFS+F+NGR +GKI A RGLRQGDPLSPFL
Sbjct: 2   VDWCFLDVVLLQKGFGKRWRMWIKGCVSSANFSVFINGRPRGKIFATRGLRQGDPLSPFL 61

Query: 206 FTLMVDSFSRLIHFCCEKRVLR-------------------------------------- 265
           FTL+ DSFSRL++FCCE+R+++                                      
Sbjct: 62  FTLIGDSFSRLVNFCCERRIIQGFAVGRERIVVSHLRYADDTIIFCPAYKGNLDRWWALI 121

Query: 266 -------GLSLNVSKTSIIGLNVSKEWLSDLAARFGCKIESLSFKCLGFPLGGNHRRGLF 293
                  GL +N++KTS+IG+N+ +   +    + GC++E +SF+ LG PLGGNHR  +F
Sbjct: 122 SLFIKGSGLRINLAKTSLIGINIGENEATSKVDKIGCRVERMSFRYLGLPLGGNHRVIVF 181

[Close]

BLAST of Lag0036932 vs. ExPASy TrEMBL
Match: A5BM49 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_022512 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.0e-38
Identity = 97/299 (32.44%), Postives = 145/299 (48.49%), Query Frame = 0


Query: 118  SSETVGDCLANGKRGILLKLDYEKAYDKVDWDYLDFILKKKGFGNRWRRWVRGCLTTTNF 177
            ++E V +   +G+ G++ K+D+EKAYD + WD+LD +L+KKGF  +WR+W+ GCL++ ++
Sbjct: 1181 ANEIVDERRRSGEEGVVFKIDFEKAYDYIRWDFLDQVLEKKGFXPKWRKWMSGCLSSVSY 1240

Query: 178  SIFLNGRSQGKIVAKRGLRQGDPLSPFLFTLMVDSFSRLIHFCCEKRVLR---------- 237
            ++ +NG ++G + A RGLRQGDPLSPFLFTL+ D  SR++    ++ +L           
Sbjct: 1241 AVLVNGSAKGWVKASRGLRQGDPLSPFLFTLVADVLSRMLLRAEKRNMLEGFRVGRNRTR 1300

Query: 238  -----------------------------------GLSLNVSKTSIIGLNVSKEWLSDLA 297
                                               GL +N+ K++I  +N+ +  +S LA
Sbjct: 1301 VSHLQFADDTIFFSNTREEDLQTLKSLLLAFGHISGLKVNLDKSNIYXINLDQXHISRLA 1360

Query: 298  ARFGCKIESLSFKCLGFPLGG----------------NHRRGLFDWEIPSWVGLIEILDT 355
                CK        LG PLG                 N RR L D EI     L+  LD 
Sbjct: 1361 ETLECKASGXPILYLGLPLGXNPRAVLGLTRPFSWNLNFRRNLSDSEIEDLEXLMRSLDG 1420

[Close]

BLAST of Lag0036932 vs. ExPASy TrEMBL
Match: A0A803QI00 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-37
Identity = 83/210 (39.52%), Postives = 123/210 (58.57%), Query Frame = 0


Query: 118  SSETVGDCLANGKRGILLKLDYEKAYDKVDWDYLDFILKKKGFGNRWRRWVRGCLTTTNF 177
            ++ETV D  + GK+G + K+D EKAYD+VDWD+LD +LK+KGFG  WR+W+RGC+++T+F
Sbjct: 1460 ANETVEDFRSRGKKGFVFKIDLEKAYDRVDWDFLDLVLKEKGFGEVWRKWIRGCVSSTSF 1519

Query: 178  SIFLNGRSQGKIVAKRGLRQGDPLSPFLFTLMVDSFSRLI-------------------- 237
            S+ +NGR +GK    RGLRQGDPLSPFLFTL+VD   RL+                    
Sbjct: 1520 SLLINGRVRGKFRGSRGLRQGDPLSPFLFTLVVDVLGRLVDKAAQSDTFSGFQVGKDNIQ 1579

Query: 238  -----------HFCCEKRVLR-------------GLSLNVSKTSIIGLNVSKEWLSDLAA 284
                        F  ++  LR             GL +N++K+ ++G+++ +E ++  A 
Sbjct: 1580 ISHLQFADDTLFFVKDEASLRKLVEIVEAFCGISGLKVNLNKSQLLGISLEEEVVAQNAE 1639

[Close]

BLAST of Lag0036932 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-13
Identity = 46/102 (45.10%), Postives = 57/102 (55.88%), Query Frame = 0


Query: 1   MAARAHDVATFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHN-------- 60
           MAARAHDVA  SIKG++A LNFP+L    PRPVSL+PRD+Q AA KAAHM          
Sbjct: 85  MAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSST 144

Query: 61  ------------------LDLDDHHSHVDDDLTEIIQLPTLG 77
                             +DL    S   ++L EI++LP+LG
Sbjct: 145 SSSSSLSSTSSLESLVLVMDLSRTES---EELGEIVELPSLG 183

[Close]

BLAST of Lag0036932 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-13
Identity = 37/50 (74.00%), Postives = 40/50 (80.00%), Query Frame = 0


Query: 1   MAARAHDVATFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHM 51
           MAARAHDVA  SIKG+SA LNFPDL    PRP SL+PRD+Q AA KAAHM
Sbjct: 70  MAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHM 119

[Close]

BLAST of Lag0036932 vs. TAIR 10
Match: AT2G25820.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 1.5e-13
Identity = 42/69 (60.87%), Postives = 49/69 (71.01%), Query Frame = 0


Query: 1   MAARAHDVATFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHHS 60
           MAARAHDVA  SIKGSSA LNFP+L   LPRPVSL+ +D+QAAAA+AA M   D      
Sbjct: 60  MAARAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALM---DFKTVPF 119

Query: 61  HVDDDLTEI 70
           H+ DD T +
Sbjct: 120 HLQDDSTPL 125

[Close]

BLAST of Lag0036932 vs. TAIR 10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 3.4e-13
Identity = 42/68 (61.76%), Postives = 48/68 (70.59%), Query Frame = 0


Query: 1   MAARAHDVATFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHHS 60
           MA RAHDVA  SIKG+SA LNFP+L  LLPRPVSL+PRDV+AAA KAA M   D D    
Sbjct: 53  MAMRAHDVAAMSIKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALM---DFDTTAF 112

Query: 61  HVDDDLTE 69
             D + +E
Sbjct: 113 RSDTETSE 117

[Close]

BLAST of Lag0036932 vs. TAIR 10
Match: AT3G60490.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 2.8e-12
Identity = 48/129 (37.21%), Postives = 64/129 (49.61%), Query Frame = 0


Query: 1   MAARAHDVATFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHHS 60
           MAARAHDVA  +IKG+S  LNFP+L  LLPRPVS +P+D+QAAA KAA            
Sbjct: 105 MAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAATKAAEATTWHKPVIDK 164

Query: 61  HVDDDLTEIIQLPTLGLRSIHRKKCSDLFSVLNHSHGQPSNRTTFDYQGYIIFMKTTSSE 120
            + D+L+    L T    +      S   S  + +  + +  T FD     +F     + 
Sbjct: 165 KLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDKESNEETVFDLPD--LFTDGLMNP 224

Query: 121 TVGDCLANG 130
               CL NG
Sbjct: 225 NDAFCLCNG 231

The following BLAST results are available for this feature:

BLAST of Lag0036932 vs. NCBI nr


Match Name	E-value	Identity	Description
CAN77848.1	2.1e-41	35.66	hypothetical protein VITISV_020832 [Vitis vinifera]	[more]
XP_022158566.1	4.8e-38	42.19	uncharacterized protein LOC111025019 [Momordica charantia]	[more]
CAN72476.1	6.3e-38	32.44	hypothetical protein VITISV_022512 [Vitis vinifera]	[more]
RVW62473.1	3.1e-37	45.22	putative mitochondrial protein [Vitis vinifera]	[more]
CAN78744.1	2.0e-36	30.29	hypothetical protein VITISV_014186 [Vitis vinifera]	[more]

BLAST of Lag0036932 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYD3	1.6e-12	45.10	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q39127	1.6e-12	74.00	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q52QU1	2.1e-12	60.87	Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9M080	4.7e-12	61.76	Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9M210	4.0e-11	37.21	Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Lag0036932 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A5AE29	7.8e-42	35.66	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]
A0A803PZR9	1.9e-40	43.81	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A6J1E196	2.3e-38	42.19	uncharacterized protein LOC111025019 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A5BM49	3.0e-38	32.44	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]
A0A803QI00	1.2e-37	39.52	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of Lag0036932 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11590.1	1.2e-13	45.10	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	1.2e-13	74.00	Integrase-type DNA-binding superfamily protein	[more]
AT2G25820.1	1.5e-13	60.87	Integrase-type DNA-binding superfamily protein	[more]
AT4G32800.1	3.4e-13	61.76	Integrase-type DNA-binding superfamily protein	[more]
AT3G60490.1	2.8e-12	37.21	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 120..219 e-value: 3.5E-19 score: 69.2
None	No IPR available	PANTHER	PTHR31985:SF165	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR TINY-LIKE	coord: 1..84
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 1..84
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 91..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0036932.1	Lag0036932.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
biological_process	GO:0006412	translation
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0097159	organic cyclic compound binding