Lag0036915 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCACAGATTCGAGTTTTCTTGACTTTCACCTGCCCACCCCATCAATTCCAGTAATCCCTCTACTCTTCATGCTTGTTCTCATCCCATTATACGACCGGGTTTTTGTTCCAATCGCCCGGAGAATCACAGTAATCCCAACGGGAATTCGACACCTCCAATGTGTTGGGGTTGGACTGGTGCTCTCAGCCATTTCCATGGCAGTTGCTGGAAAAATGTTGCAATCCAACACAACAAGGTGATTCCATTGCCACCAAGCCCCTTACATTAAGCAAATTTCGGTTGGGGTTCCAATATGCAATATTTGGAGCAGCAGATATGTTCACTTCTGATTGGACTGCTAGAGTTCTTTTACGAAGAGAGTTCAGCTGACATGAAATCCCTCAGCAGTCAGCACAGCAATATGTTGATACTTCACCAGCTCAGTGGTGGAGGAAGTGGAGAACAAGGTATAGGGGGCTGGCTGGCTAGTAATAACCTGAACAGAGATCATCTCAACTATTTTTACTGGCTACTGTCACTAATATTATAAACTTTGGAGTCTACTTGGTCTGTGCATCTTGGTATAGATACAAGACAGTGGAGTGGTGGTGATCAAGCAAGTTGGTGAAGTGAGGCCTCATAGGGAGAGCGTGTAA ATGACCACAGATTCGAGTTTTCTTGACTTTCACCTGCCCACCCCATCAATTCCAGTAATCCCTCTACTCTTCATGCTTGTTCTCATCCCATTATACGACCGGGTTTTTGTTCCAATCGCCCGGAGAATCACAGTAATCCCAACGGGAATTCGACACCTCCAATGTGTTGGGGTTGGACTGGTGCTCTCAGCCATTTCCATGGCAGTTGCTGGAAAAATGTTGCAATCCAACACAACAAGCTCAGTGGTGGAGGAAGTGGAGAACAAGATACAAGACAGTGGAGTGGTGGTGATCAAGCAAGTTGGTGAAGTGAGGCCTCATAGGGAGAGCGTGTAA ATGACCACAGATTCGAGTTTTCTTGACTTTCACCTGCCCACCCCATCAATTCCAGTAATCCCTCTACTCTTCATGCTTGTTCTCATCCCATTATACGACCGGGTTTTTGTTCCAATCGCCCGGAGAATCACAGTAATCCCAACGGGAATTCGACACCTCCAATGTGTTGGGGTTGGACTGGTGCTCTCAGCCATTTCCATGGCAGTTGCTGGAAAAATGTTGCAATCCAACACAACAAGCTCAGTGGTGGAGGAAGTGGAGAACAAGATACAAGACAGTGGAGTGGTGGTGATCAAGCAAGTTGGTGAAGTGAGGCCTCATAGGGAGAGCGTGTAA MTTDSSFLDFHLPTPSIPVIPLLFMLVLIPLYDRVFVPIARRITVIPTGIRHLQCVGVGLVLSAISMAVAGKMLQSNTTSSVVEEVENKIQDSGVVVIKQVGEVRPHRESV Homology
BLAST of Lag0036915 vs. NCBI nr
Match: XP_021663430.1 (protein NRT1/ PTR FAMILY 4.5-like [Hevea brasiliensis]) HSP 1 Score: 107.8 bits (268), Expect = 5.9e-20 Identity = 55/70 (78.57%), Postives = 64/70 (91.43%), Query Frame = 0
BLAST of Lag0036915 vs. NCBI nr
Match: XP_021612342.1 (protein NRT1/ PTR FAMILY 4.5-like [Manihot esculenta] >KAG8654721.1 hypothetical protein MANES_05G169400v8 [Manihot esculenta]) HSP 1 Score: 105.5 bits (262), Expect = 2.9e-19 Identity = 56/83 (67.47%), Postives = 70/83 (84.34%), Query Frame = 0
BLAST of Lag0036915 vs. NCBI nr
Match: XP_012071720.2 (protein NRT1/ PTR FAMILY 4.5 [Jatropha curcas]) HSP 1 Score: 104.8 bits (260), Expect = 5.0e-19 Identity = 52/70 (74.29%), Postives = 63/70 (90.00%), Query Frame = 0
BLAST of Lag0036915 vs. NCBI nr
Match: KDP38407.1 (hypothetical protein JCGZ_04332 [Jatropha curcas]) HSP 1 Score: 104.8 bits (260), Expect = 5.0e-19 Identity = 52/70 (74.29%), Postives = 63/70 (90.00%), Query Frame = 0
BLAST of Lag0036915 vs. NCBI nr
Match: XP_025013301.1 (protein NRT1/ PTR FAMILY 4.5 isoform X1 [Ricinus communis]) HSP 1 Score: 104.8 bits (260), Expect = 5.0e-19 Identity = 52/70 (74.29%), Postives = 62/70 (88.57%), Query Frame = 0
BLAST of Lag0036915 vs. ExPASy Swiss-Prot
Match: Q8VYE4 (Protein NRT1/ PTR FAMILY 4.5 OS=Arabidopsis thaliana OX=3702 GN=NPF4.5 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.4e-11 Identity = 34/69 (49.28%), Postives = 51/69 (73.91%), Query Frame = 0
BLAST of Lag0036915 vs. ExPASy Swiss-Prot
Match: Q8H157 (Protein NRT1/ PTR FAMILY 4.6 OS=Arabidopsis thaliana OX=3702 GN=NPF4.6 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.7e-09 Identity = 29/59 (49.15%), Postives = 45/59 (76.27%), Query Frame = 0
BLAST of Lag0036915 vs. ExPASy Swiss-Prot
Match: Q9FM20 (Protein NRT1/ PTR FAMILY 4.7 OS=Arabidopsis thaliana OX=3702 GN=NPF4.7 PE=2 SV=2) HSP 1 Score: 62.4 bits (150), Expect = 3.7e-09 Identity = 31/69 (44.93%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of Lag0036915 vs. ExPASy Swiss-Prot
Match: Q93VV5 (Protein NRT1/ PTR FAMILY 4.3 OS=Arabidopsis thaliana OX=3702 GN=NPF4.3 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.0e-06 Identity = 30/75 (40.00%), Postives = 45/75 (60.00%), Query Frame = 0
BLAST of Lag0036915 vs. ExPASy Swiss-Prot
Match: Q8RX77 (Protein NRT1/ PTR FAMILY 2.13 OS=Arabidopsis thaliana OX=3702 GN=NPF2.13 PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.3e-06 Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|